python3Packages.biopandas: fix numpy 2.4 compatibility (#521225)

2026-06-02 06:28:54 +00:00
parent 4d87edc412 29da54e370
commit 8db3262ac5
1 changed files with 6 additions and 0 deletions
@@ -22,6 +22,12 @@ buildPythonPackage rec {
    hash = "sha256-dUeGjDDz9VA1NrFLGKy0ebaa+MU4c1tHi5YYkAspLRk=";
  };

+  postPatch = ''
+    substituteInPlace biopandas/mmtf/pandas_mmtf.py --replace-fail \
+      'int(np.argwhere(np.array(model_indices) > ch_idx)[0]) + 1' \
+      'int(np.argwhere(np.array(model_indices) > ch_idx)[0][0]) + 1'
+  '';
+
  pythonRelaxDeps = [ "looseversion" ];

  build-system = [ setuptools ];