platypus: drop
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@@ -1,53 +0,0 @@
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{
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lib,
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stdenv,
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fetchFromGitHub,
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python27,
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htslib,
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zlib,
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makeWrapper,
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}:
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let
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python = python27.withPackages (ps: with ps; [ cython ]);
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in
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stdenv.mkDerivation {
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pname = "platypus-unstable";
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version = "2018-07-22";
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src = fetchFromGitHub {
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owner = "andyrimmer";
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repo = "Platypus";
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rev = "3e72641c69800da0cd4906b090298e654d316ee1";
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sha256 = "0nah6r54b8xm778gqyb8b7rsd76z8ji4g73sm6rvpw5s96iib1vw";
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};
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nativeBuildInputs = [ makeWrapper ];
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buildInputs = [
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htslib
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python
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zlib
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];
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buildPhase = ''
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patchShebangs .
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make
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'';
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installPhase = ''
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mkdir -p $out/libexec/platypus
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cp -r ./* $out/libexec/platypus
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mkdir -p $out/bin
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makeWrapper ${python}/bin/python $out/bin/platypus --add-flags "$out/libexec/platypus/bin/Platypus.py"
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'';
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meta = with lib; {
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description = "Platypus variant caller";
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license = licenses.gpl3;
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homepage = "https://github.com/andyrimmer/Platypus";
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maintainers = with maintainers; [ jbedo ];
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platforms = platforms.x86_64;
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};
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}
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@@ -1205,6 +1205,7 @@ mapAliases {
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pio = throw "pio has been removed due to lack of upstream maintenance"; # Added 2025-01-25
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pipewire_0_2 = throw "pipewire_0_2 has been removed as it is outdated and no longer used"; # Added 2024-07-28
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pipewire-media-session = throw "pipewire-media-session is no longer maintained and has been removed. Please use Wireplumber instead.";
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platypus = throw "platypus is unmaintained and has not merged Python3 support"; # Added 2025-03-20
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pleroma-otp = throw "'pleroma-otp' has been renamed to/replaced by 'pleroma'"; # Converted to throw 2024-10-17
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plots = throw "'plots' has been replaced by 'gnome-graphs'"; # Added 2025-02-05
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pltScheme = racket; # just to be sure
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