platypus: drop

This commit is contained in:
Benjamin Sparks
2025-03-20 21:13:29 +01:00
parent 750fef2a63
commit 7bf906339f
2 changed files with 1 additions and 53 deletions
-53
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@@ -1,53 +0,0 @@
{
lib,
stdenv,
fetchFromGitHub,
python27,
htslib,
zlib,
makeWrapper,
}:
let
python = python27.withPackages (ps: with ps; [ cython ]);
in
stdenv.mkDerivation {
pname = "platypus-unstable";
version = "2018-07-22";
src = fetchFromGitHub {
owner = "andyrimmer";
repo = "Platypus";
rev = "3e72641c69800da0cd4906b090298e654d316ee1";
sha256 = "0nah6r54b8xm778gqyb8b7rsd76z8ji4g73sm6rvpw5s96iib1vw";
};
nativeBuildInputs = [ makeWrapper ];
buildInputs = [
htslib
python
zlib
];
buildPhase = ''
patchShebangs .
make
'';
installPhase = ''
mkdir -p $out/libexec/platypus
cp -r ./* $out/libexec/platypus
mkdir -p $out/bin
makeWrapper ${python}/bin/python $out/bin/platypus --add-flags "$out/libexec/platypus/bin/Platypus.py"
'';
meta = with lib; {
description = "Platypus variant caller";
license = licenses.gpl3;
homepage = "https://github.com/andyrimmer/Platypus";
maintainers = with maintainers; [ jbedo ];
platforms = platforms.x86_64;
};
}
+1
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@@ -1205,6 +1205,7 @@ mapAliases {
pio = throw "pio has been removed due to lack of upstream maintenance"; # Added 2025-01-25
pipewire_0_2 = throw "pipewire_0_2 has been removed as it is outdated and no longer used"; # Added 2024-07-28
pipewire-media-session = throw "pipewire-media-session is no longer maintained and has been removed. Please use Wireplumber instead.";
platypus = throw "platypus is unmaintained and has not merged Python3 support"; # Added 2025-03-20
pleroma-otp = throw "'pleroma-otp' has been renamed to/replaced by 'pleroma'"; # Converted to throw 2024-10-17
plots = throw "'plots' has been replaced by 'gnome-graphs'"; # Added 2025-02-05
pltScheme = racket; # just to be sure