Merge pull request #250309 from trofi/angsd-fix-parallel

angsd: pull patch pending upstream inclusion for parallel build fix
This commit is contained in:
Mario Rodas
2023-09-13 06:24:00 -05:00
committed by GitHub
@@ -1,4 +1,14 @@
{ lib, stdenv, fetchFromGitHub, htslib, zlib, bzip2, xz, curl, openssl }:
{ lib
, stdenv
, fetchFromGitHub
, fetchpatch
, htslib
, zlib
, bzip2
, xz
, curl
, openssl
}:
stdenv.mkDerivation rec {
pname = "angsd";
@@ -11,8 +21,20 @@ stdenv.mkDerivation rec {
rev = version;
};
patches = [
# Pull pending inclusion upstream patch for parallel buil fixes:
# https://github.com/ANGSD/angsd/pull/590
(fetchpatch {
name = "parallel-make.patch";
url = "https://github.com/ANGSD/angsd/commit/89fd1d898078016df390e07e25b8a3eeadcedf43.patch";
hash = "sha256-KQgUfr3v8xc+opAm4qcSV2eaupztv4gzJJHyzJBCxqA=";
})
];
buildInputs = [ htslib zlib bzip2 xz curl openssl ];
enableParallelBuilding = true;
makeFlags = [ "HTSSRC=systemwide" "prefix=$(out)" ];
meta = with lib; {