igv: 2.17.4 -> 2.19.6 (#446252)
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@@ -2,7 +2,7 @@
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lib,
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stdenv,
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fetchzip,
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jdk17,
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jdk21,
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testers,
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wrapGAppsHook3,
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igv,
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@@ -10,10 +10,10 @@
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stdenv.mkDerivation rec {
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pname = "igv";
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version = "2.17.4";
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version = "2.19.6";
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src = fetchzip {
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url = "https://data.broadinstitute.org/igv/projects/downloads/${lib.versions.majorMinor version}/IGV_${version}.zip";
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sha256 = "sha256-LF/rwm/XlLHAJjiAlQVTmx5l+5Np2b5rPjoCdN/qERU=";
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sha256 = "sha256-hemTOCNBfigpvlFStBbxGGLpORYPfh6vn1pyE8hKWHw=";
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};
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installPhase = ''
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@@ -21,10 +21,10 @@ stdenv.mkDerivation rec {
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cp -Rv * $out/share/
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sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh
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sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igv.sh
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sed -i 's#\bjava\b#${jdk21}/bin/java#g' $out/share/igv.sh
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sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igvtools
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sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igvtools
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sed -i 's#\bjava\b#${jdk21}/bin/java#g' $out/share/igvtools
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ln -s $out/share/igv.sh $out/bin/igv
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ln -s $out/share/igvtools $out/bin/igvtools
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@@ -43,6 +43,9 @@ stdenv.mkDerivation rec {
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description = "Visualization tool for interactive exploration of genomic datasets";
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license = licenses.mit;
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platforms = platforms.unix;
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maintainers = [ maintainers.mimame ];
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maintainers = [
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maintainers.mimame
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maintainers.rollf
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];
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};
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}
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