Guillaume Girol
33afbf39f6
checkInputs used to be added to nativeBuildInputs. Now we have nativeCheckInputs to do that instead. Doing this treewide change allows to keep hashes identical to before the introduction of nativeCheckInputs.
53 lines
1.1 KiB
Nix
53 lines
1.1 KiB
Nix
{ lib
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, buildPythonPackage
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, fetchPypi
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, cython
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, lockfile
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, cachecontrol
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, decorator
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, h5py
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, ipython
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, matplotlib
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, natsort
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, numpy
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, pandas
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, scipy
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, hdmedians
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, scikit-learn
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, coverage
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, python
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, isPy3k
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}:
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buildPythonPackage rec {
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version = "0.5.8";
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pname = "scikit-bio";
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disabled = !isPy3k;
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src = fetchPypi {
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inherit pname version;
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sha256 = "sha256-1VqDw+XyyhEydE4UCSM/th2a8MWpXet7KR5uNAcSuGs=";
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};
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nativeBuildInputs = [ cython ];
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nativeCheckInputs = [ coverage ];
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propagatedBuildInputs = [ lockfile cachecontrol decorator ipython matplotlib natsort numpy pandas scipy h5py hdmedians scikit-learn ];
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# cython package not included for tests
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doCheck = false;
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checkPhase = ''
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${python.interpreter} -m skbio.test
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'';
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pythonImportsCheck = [ "skbio" ];
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meta = with lib; {
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homepage = "http://scikit-bio.org/";
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description = "Data structures, algorithms and educational resources for bioinformatics";
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license = licenses.bsd3;
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platforms = [ "x86_64-linux" "x86_64-darwin" ];
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maintainers = [ maintainers.costrouc ];
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};
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}
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