Merge pull request #249755 from natsukium/bamtools/init

bamtools: init at 2.5.2
2023-08-19 21:14:25 +09:00
parent 424040f784 5462f67cc8
commit b107015d47
2 changed files with 43 additions and 0 deletions
@@ -0,0 +1,41 @@
+{ lib
+, stdenv
+, fetchFromGitHub
+, cmake
+, jsoncpp
+, pkg-config
+, zlib
+}:
+
+stdenv.mkDerivation (finalAttrs: {
+  pname = "bamtools";
+  version = "2.5.2";
+
+  src = fetchFromGitHub {
+    owner = "pezmaster31";
+    repo = "bamtools";
+    rev = "refs/tags/v${finalAttrs.version}";
+    hash = "sha256-l2DmA4P1kPneTCL9YVACE6LcQHT0F+mufPyM69VkksE=";
+  };
+
+  nativeBuildInputs = [
+    cmake
+    pkg-config
+  ];
+
+  buildInputs = [
+    jsoncpp
+    zlib
+  ];
+
+  doCheck = true;
+
+  meta = with lib; {
+    description = "C++ API & command-line toolkit for working with BAM data";
+    homepage = "https://github.com/pezmaster31/bamtools";
+    changelog = "https://github.com/pezmaster31/bamtools/releases/tag/${finalAttrs.src.rev}";
+    license = licenses.mit;
+    maintainers = with maintainers; [ natsukium ];
+    platforms = platforms.unix;
+  };
+})
@@ -38691,6 +38691,8 @@ with pkgs;

  archimedes = callPackage ../applications/science/electronics/archimedes { };

+  bamtools = callPackage ../applications/science/biology/bamtools { };
+
  bayescan = callPackage ../applications/science/biology/bayescan { };

  bedops = callPackage ../applications/science/biology/bedops { };