python311Packages.geoalchemy2: modernize

pkgs/development/python-modules/geoalchemy2/default.nix

@@ -1,12 +1,12 @@
 { lib
 , buildPythonPackage
-, fetchPypi
+, fetchFromGitHub
 , packaging
+, setuptools
 , setuptools-scm
 , shapely
 , sqlalchemy
 , alembic
-, psycopg2
 , pytestCheckHook
 , pythonOlder
 }:
@@ -14,37 +14,35 @@
 buildPythonPackage rec {
   pname = "geoalchemy2";
   version = "0.14.2";
-  format = "setuptools";
+  pyproject = true;
 
   disabled = pythonOlder "3.7";
 
-  src = fetchPypi {
-    pname = "GeoAlchemy2";
-    inherit version;
-    hash = "sha256-jKAj3LmjbG0xLztK7mMdZjhSZOL8n+sKsPRG61YJQH0=";
+  src = fetchFromGitHub {
+    owner = "geoalchemy";
+    repo = "geoalchemy2";
+    rev = "refs/tags/${version}";
+    hash = "sha256-C/F1hpL2DnzC4UPAGGFntlQlULCx5Ufzkw7EIrzRV7I=";
   };
 
   nativeBuildInputs = [
+    setuptools
     setuptools-scm
   ];
 
   propagatedBuildInputs = [
-    packaging
-    shapely
     sqlalchemy
+    packaging
   ];
 
   nativeCheckInputs = [
     alembic
-    psycopg2
     pytestCheckHook
-  ];
+  ] ++ passthru.optional-dependencies.shapely;
 
-  pytestFlagsArray = [
-    # tests require live postgis database
-    "--deselect=tests/test_pickle.py::TestPickle::test_pickle_unpickle"
-    "--deselect=tests/gallery/test_specific_compilation.py::test_specific_compilation"
-  ];
+  env = {
+    SETUPTOOLS_SCM_PRETEND_VERSION = version;
+  };
 
   disabledTestPaths = [
     # tests require live databases
@@ -52,21 +50,27 @@ buildPythonPackage rec {
     "tests/gallery/test_length_at_insert.py"
     "tests/gallery/test_insert_raster.py"
     "tests/gallery/test_orm_mapped_v2.py"
+    "tests/gallery/test_specific_compilation.py"
     "tests/gallery/test_summarystatsagg.py"
     "tests/gallery/test_type_decorator.py"
     "tests/test_functional.py"
     "tests/test_functional_postgresql.py"
     "tests/test_functional_mysql.py"
     "tests/test_alembic_migrations.py"
+    "tests/test_pickle.py"
   ];
 
   pythonImportsCheck = [
     "geoalchemy2"
   ];
 
+  passthru.optional-dependencies = {
+    shapely = [ shapely ];
+  };
+
   meta = with lib; {
     description = "Toolkit for working with spatial databases";
-    homepage =  "https://geoalchemy-2.readthedocs.io/";
+    homepage = "https://geoalchemy-2.readthedocs.io/";
     changelog = "https://github.com/geoalchemy/geoalchemy2/releases/tag/${version}";
     license = licenses.mit;
     maintainers = with maintainers; [ nickcao ];