minimap2: cleanup and add correct 32-bit ARM flag

This commit is contained in:
Arcadio Rubio García
2025-07-05 16:15:52 +02:00
parent 70698c422b
commit 9958fc16cb
+24 -9
View File
@@ -3,6 +3,9 @@
stdenv,
fetchFromGitHub,
zlib,
minimap2,
testers,
nix-update-script,
}:
stdenv.mkDerivation rec {
@@ -18,24 +21,36 @@ stdenv.mkDerivation rec {
buildInputs = [ zlib ];
makeFlags = lib.optionals stdenv.hostPlatform.isAarch64 [
"arm_neon=1"
"aarch64=1"
];
makeFlags =
lib.optionals stdenv.hostPlatform.isAarch [ "arm_neon=1" ]
++ lib.optionals stdenv.hostPlatform.isAarch64 [ "aarch64=1" ];
installPhase = ''
mkdir -p $out/bin
cp minimap2 $out/bin
mkdir -p $out/share/man/man1
cp minimap2.1 $out/share/man/man1
runHook preInstall
install -m755 -Dt $out/bin minimap2
install -m644 -Dt $out/share/man/man1 minimap2.1
runHook postInstall
'';
passthru.tests.version = testers.testVersion {
package = minimap2;
command = "minimap2 --version";
};
passthru.updateScript = nix-update-script { };
meta = with lib; {
description = "Versatile pairwise aligner for genomic and spliced nucleotide sequences";
longDescription = ''
Minimap2 is a versatile sequence alignment program that aligns
DNA or mRNA sequences against a large reference database. It is
particularly efficient for long reads and can handle various
sequencing technologies including PacBio and Oxford Nanopore.
'';
mainProgram = "minimap2";
homepage = "https://lh3.github.io/minimap2";
license = licenses.mit;
platforms = platforms.all;
platforms = platforms.unix;
maintainers = [ maintainers.arcadio ];
};
}