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igv: only replace actual java commands with the full path (#338340)

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Aleksana
2024-09-06 23:11:25 +08:00
committed by GitHub
parent de383830c4 5d19a9ed86
commit 6b045549f1
1 changed files with 2 additions and 2 deletions
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pkgs/applications/science/biology/igv/default.nix
+2 -2
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@@ -13,10 +13,10 @@ stdenv.mkDerivation rec {
cp -Rv * $out/share/
sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh
sed -i 's#java#${jdk17}/bin/java#g' $out/share/igv.sh
sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igv.sh
sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igvtools
sed -i 's#java#${jdk17}/bin/java#g' $out/share/igvtools
sed -i 's#\bjava\b#${jdk17}/bin/java#g' $out/share/igvtools
ln -s $out/share/igv.sh $out/bin/igv
ln -s $out/share/igvtools $out/bin/igvtools