Merge pull request #329398 from gador/datalad-tests
datalad: 1.0.2 -> 1.1.1, add tests
This commit is contained in:
@@ -1,69 +1,82 @@
|
||||
{ lib, stdenv, fetchFromGitHub, installShellFiles, python3, git, git-annex }:
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
fetchFromGitHub,
|
||||
installShellFiles,
|
||||
python3,
|
||||
git,
|
||||
git-annex,
|
||||
p7zip,
|
||||
curl,
|
||||
coreutils,
|
||||
}:
|
||||
|
||||
python3.pkgs.buildPythonApplication rec {
|
||||
pname = "datalad";
|
||||
version = "1.0.2";
|
||||
version = "1.1.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "datalad";
|
||||
repo = pname;
|
||||
rev = "refs/tags/${version}";
|
||||
hash = "sha256-oq+DdlWcwjJSQdnqHlYCa9I7iSOKf+hI35Lcv/GM24c=";
|
||||
hash = "sha256-Vw/RpMf+jnUijJ3GZ9nLk1IRWOADmM+jNtYl5Ba6uLg=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [ installShellFiles git ];
|
||||
postPatch = ''
|
||||
substituteInPlace datalad/distribution/create_sibling.py \
|
||||
--replace-fail "/bin/ls" "${coreutils}/bin/ls"
|
||||
'';
|
||||
|
||||
propagatedBuildInputs = with python3.pkgs; [
|
||||
# core
|
||||
platformdirs
|
||||
chardet
|
||||
iso8601
|
||||
humanize
|
||||
fasteners
|
||||
packaging
|
||||
patool
|
||||
tqdm
|
||||
annexremote
|
||||
looseversion
|
||||
setuptools
|
||||
git-annex
|
||||
nativeBuildInputs = [
|
||||
installShellFiles
|
||||
git
|
||||
];
|
||||
|
||||
# downloaders-extra
|
||||
# requests-ftp # not in nixpkgs yet
|
||||
build-system = [ python3.pkgs.setuptools ];
|
||||
|
||||
# downloaders
|
||||
boto
|
||||
keyrings-alt
|
||||
keyring
|
||||
msgpack
|
||||
requests
|
||||
dependencies =
|
||||
with python3.pkgs;
|
||||
[
|
||||
# core
|
||||
platformdirs
|
||||
chardet
|
||||
iso8601
|
||||
humanize
|
||||
fasteners
|
||||
packaging
|
||||
patool
|
||||
tqdm
|
||||
annexremote
|
||||
looseversion
|
||||
setuptools
|
||||
git-annex
|
||||
|
||||
# publish
|
||||
python-gitlab
|
||||
# downloaders-extra
|
||||
# requests-ftp # not in nixpkgs yet
|
||||
|
||||
# misc
|
||||
argcomplete
|
||||
pyperclip
|
||||
python-dateutil
|
||||
# downloaders
|
||||
boto3
|
||||
keyrings-alt
|
||||
keyring
|
||||
msgpack
|
||||
requests
|
||||
|
||||
# metadata
|
||||
simplejson
|
||||
whoosh
|
||||
# publish
|
||||
python-gitlab
|
||||
|
||||
# metadata-extra
|
||||
pyyaml
|
||||
mutagen
|
||||
exifread
|
||||
python-xmp-toolkit
|
||||
pillow
|
||||
|
||||
# duecredit
|
||||
duecredit
|
||||
|
||||
# python>=3.8
|
||||
distro
|
||||
] ++ lib.optionals stdenv.hostPlatform.isWindows [ colorama ]
|
||||
++ lib.optionals (python3.pythonOlder "3.10") [ importlib-metadata ];
|
||||
# misc
|
||||
argcomplete
|
||||
pyperclip
|
||||
python-dateutil
|
||||
# duecredit
|
||||
duecredit
|
||||
# python>=3.8
|
||||
distro
|
||||
]
|
||||
++ lib.optionals stdenv.hostPlatform.isWindows [ colorama ]
|
||||
++ lib.optionals (python3.pythonOlder "3.9") [ importlib-resources ]
|
||||
++ lib.optionals (python3.pythonOlder "3.10") [ importlib-metadata ]
|
||||
++ lib.optionals (python3.pythonOlder "3.11") [ typing_extensions ];
|
||||
|
||||
postInstall = ''
|
||||
installShellCompletion --cmd datalad \
|
||||
@@ -72,15 +85,113 @@ python3.pkgs.buildPythonApplication rec {
|
||||
wrapProgram $out/bin/datalad --prefix PYTHONPATH : "$PYTHONPATH"
|
||||
'';
|
||||
|
||||
# no tests
|
||||
doCheck = false;
|
||||
preCheck = ''
|
||||
export HOME=$TMPDIR
|
||||
'';
|
||||
|
||||
# tests depend on apps in $PATH which only will get installed after the test
|
||||
disabledTests = [
|
||||
# No such file or directory: 'datalad'
|
||||
"test_script_shims"
|
||||
"test_cfg_override"
|
||||
"test_completion"
|
||||
"test_nested_pushclone_cycle_allplatforms"
|
||||
"test_create_sub_gh3463"
|
||||
"test_create_sub_dataset_dot_no_path"
|
||||
"test_cfg_passthrough"
|
||||
"test_addurls_stdin_input_command_line"
|
||||
"test_run_datalad_help"
|
||||
"test_status_custom_summary_no_repeats"
|
||||
"test_quoting"
|
||||
|
||||
# No such file or directory: 'git-annex-remote-[...]"
|
||||
"test_create"
|
||||
"test_ensure_datalad_remote_maybe_enable"
|
||||
|
||||
# "git-annex: unable to use external special remote git-annex-remote-datalad"
|
||||
"test_ria_postclonecfg"
|
||||
"test_ria_postclone_noannex"
|
||||
"test_ria_push"
|
||||
"test_basic_scenario"
|
||||
"test_annex_get_from_subdir"
|
||||
"test_ensure_datalad_remote_init_and_enable_needed"
|
||||
"test_ensure_datalad_remote_maybe_enable[False]"
|
||||
"test_ensure_datalad_remote_maybe_enable[True]"
|
||||
"test_create_simple"
|
||||
"test_create_alias"
|
||||
"test_storage_only"
|
||||
"test_initremote"
|
||||
"test_read_access"
|
||||
"test_ephemeral"
|
||||
"test_initremote_basic_fileurl"
|
||||
"test_initremote_basic_httpurl"
|
||||
"test_remote_layout"
|
||||
"test_version_check"
|
||||
"test_gitannex_local"
|
||||
"test_push_url"
|
||||
"test_url_keys"
|
||||
"test_obtain_permission_root"
|
||||
"test_source_candidate_subdataset"
|
||||
"test_update_fetch_all"
|
||||
"test_add_archive_dirs"
|
||||
"test_add_archive_content"
|
||||
"test_add_archive_content_strip_leading"
|
||||
"test_add_archive_content_zip"
|
||||
"test_add_archive_content_absolute_path"
|
||||
"test_add_archive_use_archive_dir"
|
||||
"test_add_archive_single_file"
|
||||
"test_add_delete"
|
||||
"test_add_archive_leading_dir"
|
||||
"test_add_delete_after_and_drop"
|
||||
"test_add_delete_after_and_drop_subdir"
|
||||
"test_override_existing_under_git"
|
||||
"test_copy_file_datalad_specialremote"
|
||||
"test_download_url_archive"
|
||||
"test_download_url_archive_from_subdir"
|
||||
"test_download_url_archive_trailing_separator"
|
||||
"test_download_url_need_datalad_remote"
|
||||
"test_datalad_credential_helper - assert False"
|
||||
|
||||
# need internet access
|
||||
"test_clone_crcns"
|
||||
"test_clone_datasets_root"
|
||||
"test_reckless"
|
||||
"test_autoenabled_remote_msg"
|
||||
"test_ria_http_storedataladorg"
|
||||
"test_gin_cloning"
|
||||
"test_nonuniform_adjusted_subdataset"
|
||||
"test_install_datasets_root"
|
||||
"test_install_simple_local"
|
||||
"test_install_dataset_from_just_source"
|
||||
"test_install_dataset_from_just_source_via_path"
|
||||
"test_datasets_datalad_org"
|
||||
"test_get_cached_dataset"
|
||||
"test_cached_dataset"
|
||||
"test_cached_url"
|
||||
"test_anonymous_s3"
|
||||
"test_protocols"
|
||||
"test_get_versioned_url_anon"
|
||||
"test_install_recursive_github"
|
||||
"test_failed_install_multiple"
|
||||
|
||||
# pbcopy not found
|
||||
"test_wtf"
|
||||
];
|
||||
|
||||
nativeCheckInputs = [
|
||||
p7zip
|
||||
python3.pkgs.pytestCheckHook
|
||||
git-annex
|
||||
curl
|
||||
python3.pkgs.httpretty
|
||||
];
|
||||
|
||||
pythonImportsCheck = [ "datalad" ];
|
||||
|
||||
meta = with lib; {
|
||||
meta = {
|
||||
description = "Keep code, data, containers under control with git and git-annex";
|
||||
homepage = "https://www.datalad.org";
|
||||
license = licenses.mit;
|
||||
maintainers = with maintainers; [ renesat ];
|
||||
license = lib.licenses.mit;
|
||||
maintainers = with lib.maintainers; [ renesat ];
|
||||
};
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user