Merge master into staging-next
This commit is contained in:
nixpkgs-ci[bot]
@@ -18330,6 +18330,15 @@
|
||||
githubId = 22592293;
|
||||
name = "Kartik Gokte";
|
||||
};
|
||||
nukdokplex = {
|
||||
email = "nukdokplex@nukdokplex.ru";
|
||||
github = "nukdokplex";
|
||||
githubId = 25458915;
|
||||
name = "Viktor Titov";
|
||||
keys = [
|
||||
{ fingerprint = "7CE2 4C42 942D 58EA 99F6 F00A A47E 7374 3EF6 FCC4"; }
|
||||
];
|
||||
};
|
||||
nullcube = {
|
||||
email = "nullcub3@gmail.com";
|
||||
name = "NullCube";
|
||||
|
||||
@@ -366,13 +366,11 @@ in
|
||||
type = "rsa";
|
||||
bits = 4096;
|
||||
path = "/etc/ssh/ssh_host_rsa_key";
|
||||
rounds = 100;
|
||||
openSSHFormat = true;
|
||||
}
|
||||
{
|
||||
type = "ed25519";
|
||||
path = "/etc/ssh/ssh_host_ed25519_key";
|
||||
rounds = 100;
|
||||
comment = "key comment";
|
||||
}
|
||||
];
|
||||
@@ -798,7 +796,6 @@ in
|
||||
ssh-keygen \
|
||||
-t "${k.type}" \
|
||||
${lib.optionalString (k ? bits) "-b ${toString k.bits}"} \
|
||||
${lib.optionalString (k ? rounds) "-a ${toString k.rounds}"} \
|
||||
${lib.optionalString (k ? comment) "-C '${k.comment}'"} \
|
||||
${lib.optionalString (k ? openSSHFormat && k.openSSHFormat) "-o"} \
|
||||
-f "${k.path}" \
|
||||
|
||||
+1
-1
@@ -576,7 +576,7 @@ If you do need to do create this sort of patch file, one way to do so is with gi
|
||||
|
||||
```ShellSession
|
||||
$ git init
|
||||
$ git add .
|
||||
$ git add -A
|
||||
```
|
||||
|
||||
3. Edit some files to make whatever changes need to be included in the patch.
|
||||
|
||||
@@ -1478,8 +1478,8 @@ let
|
||||
mktplcRef = {
|
||||
publisher = "discloud";
|
||||
name = "discloud";
|
||||
version = "2.22.50";
|
||||
hash = "sha256-O9ourjcg4nwfXZOz9n1vgD6ufTkGYNDZrPLnqPUiCAc=";
|
||||
version = "2.23.9";
|
||||
hash = "sha256-1IwWaaSF3W5y8Cy/lpscbxGm7xyNGf8cAIu3zhTjWKU=";
|
||||
};
|
||||
meta = {
|
||||
changelog = "https://marketplace.visualstudio.com/items/discloud.discloud/changelog";
|
||||
|
||||
@@ -5,13 +5,13 @@
|
||||
}:
|
||||
mkLibretroCore {
|
||||
core = "gambatte";
|
||||
version = "0-unstable-2025-06-13";
|
||||
version = "0-unstable-2025-06-20";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "libretro";
|
||||
repo = "gambatte-libretro";
|
||||
rev = "811b1f7a56c16f8588caada36d7a3f9a56cb16d4";
|
||||
hash = "sha256-pPLUvlwRoVMRcCGyxqot2QAanKmQWknk5uF4rRZ41zY=";
|
||||
rev = "a693367ab1aea60266c7fa7c666b0779035d4745";
|
||||
hash = "sha256-nQ/hh9EkcftcdV0MvPl3kRUGBxukOxbgLCM9786rtd4=";
|
||||
};
|
||||
|
||||
meta = {
|
||||
|
||||
@@ -14,13 +14,13 @@
|
||||
}:
|
||||
mkLibretroCore {
|
||||
core = "play";
|
||||
version = "0-unstable-2025-06-13";
|
||||
version = "0-unstable-2025-06-18";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "jpd002";
|
||||
repo = "Play-";
|
||||
rev = "011be1b24fcafd4e5c2262538bd37dfe42a2cd05";
|
||||
hash = "sha256-fcIDh5ydfbwwdlP0KcGNekjUt+uiDe/spzPLOwvLeUI=";
|
||||
rev = "ea544501ba7d06f53188939254f671055ceaeaba";
|
||||
hash = "sha256-fGMFtjvqKCy7jd59Ky2pcLR5PANq1v9GT5tVB2iPXhk=";
|
||||
fetchSubmodules = true;
|
||||
};
|
||||
|
||||
|
||||
@@ -22,13 +22,13 @@
|
||||
|
||||
buildGoModule (finalAttrs: {
|
||||
pname = "kubernetes";
|
||||
version = "1.33.1";
|
||||
version = "1.33.2";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "kubernetes";
|
||||
repo = "kubernetes";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-fPKLe1P2jsu6pOTqofFrk1048kPOx/mmXYm7/tBzM84=";
|
||||
hash = "sha256-Ef/tpjM5RGQzO8rZxTad23DuM6VLlV3N54LOu7dtc6A=";
|
||||
};
|
||||
|
||||
vendorHash = null;
|
||||
|
||||
@@ -426,13 +426,13 @@
|
||||
"vendorHash": "sha256-oVTanZpCWs05HwyIKW2ajiBPz1HXOFzBAt5Us+EtTRw="
|
||||
},
|
||||
"equinix": {
|
||||
"hash": "sha256-1/cKun6sywQeNE7utWoXt84B3kAk5YOmFTjCatwHrqE=",
|
||||
"hash": "sha256-oKAfDSSY8Ys7wKHSDoFPOOrbXN4cOFq4HYinngjD5xY=",
|
||||
"homepage": "https://registry.terraform.io/providers/equinix/equinix",
|
||||
"owner": "equinix",
|
||||
"repo": "terraform-provider-equinix",
|
||||
"rev": "v3.9.0",
|
||||
"rev": "v3.10.0",
|
||||
"spdx": "MIT",
|
||||
"vendorHash": "sha256-sjEgBLwk/dYUmq+kL0PtamEukXgC9rzeyTT87HK0Y8E="
|
||||
"vendorHash": "sha256-kwrRbuMP57knT38w9SmrIs8bPmTaMeflqWb+4cFphew="
|
||||
},
|
||||
"exoscale": {
|
||||
"hash": "sha256-RUO4Ge2z4e4N2FWiLtSNv/w2ivgOJVNYQCJvT8hN/8g=",
|
||||
@@ -1246,11 +1246,11 @@
|
||||
"vendorHash": "sha256-Tft0YjNUtwDH0SliSseXHqMKB2yzQTsAG1Wfc5ihpvE="
|
||||
},
|
||||
"spotinst": {
|
||||
"hash": "sha256-opJqvsqGqsFz2G+5T2JK1tpDxnFmMCxRVrUNYYnuN7s=",
|
||||
"hash": "sha256-RdSjsqwvAbhSE/CEBlygjwRpwA5ybsr8pNxlX90Z5Mk=",
|
||||
"homepage": "https://registry.terraform.io/providers/spotinst/spotinst",
|
||||
"owner": "spotinst",
|
||||
"repo": "terraform-provider-spotinst",
|
||||
"rev": "v1.220.2",
|
||||
"rev": "v1.220.3",
|
||||
"spdx": "MPL-2.0",
|
||||
"vendorHash": "sha256-/UoLwkMCY4PsfNITOQBKWT9bKaReaIISqWyYiTS4/64="
|
||||
},
|
||||
|
||||
@@ -10,16 +10,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "discordo";
|
||||
version = "0-unstable-2025-06-12";
|
||||
version = "0-unstable-2025-06-21";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "ayn2op";
|
||||
repo = pname;
|
||||
rev = "ea5abfdcd67298086a6eb8fc84b7b622b6ab3496";
|
||||
hash = "sha256-Srm1nEiY4DiZB2Ogj1jzvB+9pmJRcBYLvlikANa7FHM=";
|
||||
rev = "635ac3678656f23e21de7b114b41cce4390b3386";
|
||||
hash = "sha256-mM5JesCqzPkOp+u/oZABef/CNAwlGACNqmHr7YG0wD4=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-4iBMRcnOWCGz6QkYY7mmgKFw6c5LR25sZaRVm7wreOM=";
|
||||
vendorHash = "sha256-X1/NjLI16U9+UyXMDmogRfIvuYNmWgIJ40uYo7VeTP0=";
|
||||
|
||||
env.CGO_ENABLED = 0;
|
||||
|
||||
|
||||
@@ -47,7 +47,7 @@ assert (!blas.isILP64) && (!lapack.isILP64);
|
||||
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "R";
|
||||
version = "4.5.0";
|
||||
version = "4.5.1";
|
||||
|
||||
src =
|
||||
let
|
||||
@@ -55,7 +55,7 @@ stdenv.mkDerivation (finalAttrs: {
|
||||
in
|
||||
fetchurl {
|
||||
url = "https://cran.r-project.org/src/base/R-${lib.versions.major version}/${pname}-${version}.tar.gz";
|
||||
sha256 = "sha256-OzPqET4NHdyXk4dNWUnOwsc4b2bkq/sc75rsIoRsPOE=";
|
||||
hash = "sha256-tCp5IUADhmRbEBBbkcaHKHh9tcTIPJ9sMKzc5jLhu3A=";
|
||||
};
|
||||
|
||||
outputs = [
|
||||
|
||||
@@ -31,13 +31,13 @@ in
|
||||
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "avrdude";
|
||||
version = "8.0";
|
||||
version = "8.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "avrdudes";
|
||||
repo = "avrdude";
|
||||
rev = "v${finalAttrs.version}";
|
||||
sha256 = "w58HVCvKuWpGJwllupbj7ndeq4iE9LPs/IjFSUN0DOU=";
|
||||
sha256 = "sha256-i1q0NQKVd/wiOm1Amop3hW+FWuefFOQCCivuEtEH38k=";
|
||||
};
|
||||
|
||||
nativeBuildInputs =
|
||||
|
||||
@@ -17,7 +17,7 @@
|
||||
}:
|
||||
|
||||
stdenvNoCC.mkDerivation rec {
|
||||
version = "1.2.16";
|
||||
version = "1.2.17";
|
||||
pname = "bun";
|
||||
|
||||
src =
|
||||
@@ -86,19 +86,19 @@ stdenvNoCC.mkDerivation rec {
|
||||
sources = {
|
||||
"aarch64-darwin" = fetchurl {
|
||||
url = "https://github.com/oven-sh/bun/releases/download/bun-v${version}/bun-darwin-aarch64.zip";
|
||||
hash = "sha256-IBaCFzMLDruOkUg25jqvVxQK/wz5VxYidlh8qwQS8X8=";
|
||||
hash = "sha256-n1X9IT8vdo0C61uYhaqkSx4TB6aAwYYitXCVMCqTGvk=";
|
||||
};
|
||||
"aarch64-linux" = fetchurl {
|
||||
url = "https://github.com/oven-sh/bun/releases/download/bun-v${version}/bun-linux-aarch64.zip";
|
||||
hash = "sha256-gKAkQ0q1sJjCWe5VsfWCgFkdHeKGxcZStjNkCoyZ5j4=";
|
||||
hash = "sha256-oLmW9IyXe+tOh7CaRx3tfmPuXC+0tyeQx6tLrbwUfWs=";
|
||||
};
|
||||
"x86_64-darwin" = fetchurl {
|
||||
url = "https://github.com/oven-sh/bun/releases/download/bun-v${version}/bun-darwin-x64-baseline.zip";
|
||||
hash = "sha256-WPEJ8m81EF1RogdpAOLhdQamBY7lk6NMRZ3IeeUiHnQ=";
|
||||
hash = "sha256-pUtqF3ilItj4z1fBgJWsp2QrAJz4FhPkiAX9gpVPsME=";
|
||||
};
|
||||
"x86_64-linux" = fetchurl {
|
||||
url = "https://github.com/oven-sh/bun/releases/download/bun-v${version}/bun-linux-x64.zip";
|
||||
hash = "sha256-+DEdjXyqDZOMbEzs8KYA5enOTidaQR44oun4x30MEAI=";
|
||||
hash = "sha256-YFQgcHRlO028IyDVph5mTktvQjee/BjWGBv/zAekMZM=";
|
||||
};
|
||||
};
|
||||
updateScript = writeShellScript "update-bun" ''
|
||||
|
||||
@@ -10,17 +10,17 @@
|
||||
|
||||
rustPlatform.buildRustPackage rec {
|
||||
pname = "cargo-tarpaulin";
|
||||
version = "0.32.7";
|
||||
version = "0.32.8";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "xd009642";
|
||||
repo = "tarpaulin";
|
||||
rev = version;
|
||||
hash = "sha256-e7U9xhS703Ww9m0Ky1QRKgSmO0M15UR4if/ZdbLSiTs=";
|
||||
hash = "sha256-DdDYTMtiHFrTnUihhZlHB9ZuuyXwGL8eQ4mqgsgPnsQ=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-neG0W3AxgQ2/F9y1e176DHsS247Fx4WcHykc6GdPZvc=";
|
||||
cargoHash = "sha256-2VnQo+WSc/bMMnGXY+kyLh5P2a39S8KDirfqbLJRSu0=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
pkg-config
|
||||
|
||||
@@ -12,13 +12,13 @@
|
||||
}:
|
||||
stdenvNoCC.mkDerivation rec {
|
||||
pname = "catppuccin-sddm";
|
||||
version = "1.0.0";
|
||||
version = "1.1.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "catppuccin";
|
||||
repo = "sddm";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-SdpkuonPLgCgajW99AzJaR8uvdCPi4MdIxS5eB+Q9WQ=";
|
||||
hash = "sha256-mDOiIGcpIvl4d3Dtsb2AX/1OggFEJ+hAjCd2LH7lqv0=";
|
||||
};
|
||||
|
||||
dontWrapQtApps = true;
|
||||
|
||||
@@ -8,13 +8,13 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "ceph-csi";
|
||||
version = "3.14.0";
|
||||
version = "3.14.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "ceph";
|
||||
repo = "ceph-csi";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-c6OaWDR38S0yl3pVN+DYjfg9oHqmVXljstmvBDmfOi8=";
|
||||
hash = "sha256-WyWs5zrgU9//b2CeIKvgcE4jQDsfYQjo4UwYjpHyEeY=";
|
||||
};
|
||||
|
||||
preConfigure = ''
|
||||
|
||||
@@ -7,16 +7,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "circleci-cli";
|
||||
version = "0.1.32367";
|
||||
version = "0.1.32580";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "CircleCI-Public";
|
||||
repo = "circleci-cli";
|
||||
rev = "v${version}";
|
||||
sha256 = "sha256-8phKDgZPMJlZryCAUy2Jtk2BdMbeCQ9RdhEfkN7MEWc=";
|
||||
sha256 = "sha256-BeujMfaW5byZn25OpP1SbAuw0J9of6csw+LK9SVcu+A=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-mMMZ0EntLT9YC0Q1ya/uTRA2cl95aqg/XBtLXC7ufqc=";
|
||||
vendorHash = "sha256-RQK51VSag1AkJMa/rmWpSuuzhRqSG2a3+sNisp0q7lU=";
|
||||
|
||||
nativeBuildInputs = [ installShellFiles ];
|
||||
|
||||
|
||||
@@ -27,16 +27,16 @@ assert lib.assertMsg (lib.elem true [
|
||||
|
||||
rustPlatform.buildRustPackage rec {
|
||||
pname = "diesel-cli";
|
||||
version = "2.2.10";
|
||||
version = "2.2.11";
|
||||
|
||||
src = fetchCrate {
|
||||
inherit version;
|
||||
crateName = "diesel_cli";
|
||||
hash = "sha256-ELl8jrTWu2pXn2+ZQh7Z/lrmxRCkCXCCXvXcAKF5IJg=";
|
||||
hash = "sha256-utiIuifPxHjvC0TkY2XLeOlqReaal/4T4hrJ7tmQ27k=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-uijO0eAc9U7T5SDh3iCr/wC257Q83VOJGop4KADGfgA=";
|
||||
cargoHash = "sha256-QHcH0jgBAYtyYJoaBJW92HR5ZBgdMLupe5+l22Wpfjg=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
installShellFiles
|
||||
|
||||
@@ -9,14 +9,14 @@
|
||||
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "dita-ot";
|
||||
version = "4.3.2";
|
||||
version = "4.3.3";
|
||||
|
||||
nativeBuildInputs = [ makeWrapper ];
|
||||
buildInputs = [ openjdk17 ];
|
||||
|
||||
src = fetchzip {
|
||||
url = "https://github.com/dita-ot/dita-ot/releases/download/${finalAttrs.version}/dita-ot-${finalAttrs.version}.zip";
|
||||
hash = "sha256-LmXkFuejnWQh0i1L0/GcD/NBNBCMKE5+7M7bUC0DLIg=";
|
||||
hash = "sha256-67sJ/nDxjr2ekxd9rkENBLRpK08nqo02LRnWjtQZA5U=";
|
||||
};
|
||||
|
||||
installPhase = ''
|
||||
|
||||
@@ -9,7 +9,7 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "doctl";
|
||||
version = "1.130.0";
|
||||
version = "1.131.0";
|
||||
|
||||
vendorHash = null;
|
||||
|
||||
@@ -42,7 +42,7 @@ buildGoModule rec {
|
||||
owner = "digitalocean";
|
||||
repo = "doctl";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-jFgcrJVUCs7RwrXczaKpvt/NjFIk0q26/n8SN8olSYE=";
|
||||
hash = "sha256-bZpYojpNm9TPJOulxBgXJ0l/JAVxNakA6JifGOhX3BU=";
|
||||
};
|
||||
|
||||
meta = {
|
||||
|
||||
@@ -6,18 +6,18 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "dolt";
|
||||
version = "1.55.1";
|
||||
version = "1.55.2";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "dolthub";
|
||||
repo = "dolt";
|
||||
rev = "v${version}";
|
||||
sha256 = "sha256-XIvhfnjr8KJZDkx8L/eN+caiW8oXhxrMgEGcj1L3KnQ=";
|
||||
sha256 = "sha256-smBb3QNsCipAKzR45bJk9GZZK02YiAkknC7YJBa02Mg=";
|
||||
};
|
||||
|
||||
modRoot = "./go";
|
||||
subPackages = [ "cmd/dolt" ];
|
||||
vendorHash = "sha256-iC4NAeNe7/Uz79HWYsF35WoWi+RRcGKyhWc8efvVf4E=";
|
||||
vendorHash = "sha256-/mh95CRtSK6eG/6CMiIYj/Qh7YgLutXNyG9/YTYtaPo=";
|
||||
proxyVendor = true;
|
||||
doCheck = false;
|
||||
|
||||
|
||||
@@ -10,13 +10,13 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "doppler";
|
||||
version = "3.75.0";
|
||||
version = "3.75.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "dopplerhq";
|
||||
repo = "cli";
|
||||
rev = version;
|
||||
hash = "sha256-hxCrAsie44jBNp7UtjTcJmjgNXUc9I/aIsq1UL/pbg8=";
|
||||
hash = "sha256-YyhDvBgdcy3CtVpQj60XQ0aqE2zT1LV9QXQJiJvlaic=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-tSRtgkDPvDlEfwuNhahvs3Pvt4h7QAJrJtb1XQXGaFM=";
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
{
|
||||
"version" = "1.11.103";
|
||||
"version" = "1.11.104";
|
||||
"hashes" = {
|
||||
"desktopSrcHash" = "sha256-GKuIwoco8O9EjXrE7jGdfTDfWTyhozDtzrJFVH+uvaQ=";
|
||||
"desktopYarnHash" = "sha256-/Gy/sYk8EBWU07zXwPl0zsDW5ADRq1j5PH4lPFe8dxk=";
|
||||
"desktopSrcHash" = "sha256-y2lPa7Qj+y4XtfvGtJ8mJZ343syDquTqjkqeuqCUMYU=";
|
||||
"desktopYarnHash" = "sha256-L1Yha0o4T5HefoWdRcfqMB/gOPEoQoY4iSED1zWK40g=";
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
{
|
||||
"version" = "1.11.103";
|
||||
"version" = "1.11.104";
|
||||
"hashes" = {
|
||||
"webSrcHash" = "sha256-yTqrvKa9B6gJ3+WR6jJSud+L/rGQsm7DkLHuicrI5Es=";
|
||||
"webYarnHash" = "sha256-ys/H9AG1EdGHVMTtluqNSg/aW/OOA9/x79hErgiKef0=";
|
||||
"webSrcHash" = "sha256-OwkJccflilM98SklTb6yt6t2/71ITQXi3br7ICZ8z0k=";
|
||||
"webYarnHash" = "sha256-PIxue2M0Hn8MeTRt7qJBtVJZ4hJzBbc0za+c7MEDbio=";
|
||||
};
|
||||
}
|
||||
|
||||
@@ -0,0 +1,74 @@
|
||||
{
|
||||
lib,
|
||||
stdenv,
|
||||
fetchurl,
|
||||
rpmextract,
|
||||
libjpeg,
|
||||
cups,
|
||||
}:
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "epson_201310w";
|
||||
version = "1.0.1";
|
||||
|
||||
src = fetchurl {
|
||||
url = "https://download3.ebz.epson.net/dsc/f/03/00/15/64/77/6f825c323a9f4b8429e3f9f0f4e9c50b1b15f583/epson-inkjet-printer-201310w-${finalAttrs.version}-1.src.rpm";
|
||||
hash = "sha256-596qMon5KmMHe7mh+ykdpWeazJOCGA6HmmtvdGheRmA=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [ rpmextract ];
|
||||
|
||||
buildInputs = [
|
||||
libjpeg
|
||||
cups
|
||||
];
|
||||
|
||||
unpackPhase = ''
|
||||
runHook preUnpack
|
||||
rpmextract $src
|
||||
tar -zxf epson-inkjet-printer-201310w-1.0.1.tar.gz
|
||||
tar -zxf epson-inkjet-printer-filter-1.0.2.tar.gz
|
||||
runHook postUnpack
|
||||
'';
|
||||
|
||||
preConfigure = ''
|
||||
cd epson-inkjet-printer-filter-1.0.2
|
||||
'';
|
||||
|
||||
postInstall = ''
|
||||
cd ../epson-inkjet-printer-201310w-1.0.1
|
||||
cp -a lib64 resource watermark $out
|
||||
install --mode=0644 -Dt $out/share/cups/model ppds/EPSON_L120.ppd
|
||||
mkdir -p $out/doc
|
||||
cp -a Manual.txt $out/doc
|
||||
cp -a README $out/doc/README.driver
|
||||
'';
|
||||
|
||||
postFixup = ''
|
||||
substituteInPlace $out/share/cups/model/EPSON_L120.ppd \
|
||||
--replace-fail "/home/epson/projects/PrinterDriver/P2/_rpmbuild/SOURCES/epson-inkjet-printer-201310w-1.0.1/watermark" "$out/watermark" \
|
||||
--replace-fail "Epson_201310w.1.data" "$out/resource/Epson_201310w.1.data"
|
||||
'';
|
||||
|
||||
meta = {
|
||||
homepage = "https://www.epson.eu/en_EU/support/sc/epson-l120/s/s1346";
|
||||
description = "Epson printer driver for L120 series inkjet printers";
|
||||
longDescription = ''
|
||||
This software is a filter program used with the Common UNIX Printing
|
||||
System (CUPS) under Linux. It supplies high quality printing with
|
||||
Seiko Epson L120 series printers.
|
||||
|
||||
To use the driver adjust your configuration.nix file:
|
||||
services.printing = {
|
||||
enable = true;
|
||||
drivers = [ pkgs.epson_201310w ];
|
||||
};
|
||||
'';
|
||||
license = with lib.licenses; [
|
||||
lgpl21
|
||||
epson
|
||||
];
|
||||
sourceProvenance = [ lib.sourceTypes.binaryNativeCode ];
|
||||
maintainers = with lib.maintainers; [ nukdokplex ];
|
||||
platforms = [ "x86_64-linux" ];
|
||||
};
|
||||
})
|
||||
@@ -0,0 +1,66 @@
|
||||
{
|
||||
lib,
|
||||
fetchFromGitHub,
|
||||
esbuild,
|
||||
buildNpmPackage,
|
||||
inter,
|
||||
}:
|
||||
|
||||
buildNpmPackage rec {
|
||||
pname = "pangolin";
|
||||
version = "1.2.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "fosrl";
|
||||
repo = "pangolin";
|
||||
tag = version;
|
||||
hash = "sha256-2yrim4pr8cgIh/FBuGIuK+ycwImpMiz+m21H5qYARmU=";
|
||||
};
|
||||
|
||||
npmDepsHash = "sha256-fi4e79Bk1LC/LizBJ+EhCjDzLR5ZocgVyWbSXsEJKdw=";
|
||||
nativeBuildInputs = [ esbuild ];
|
||||
# Replace the googleapis.com Inter font with a local copy from nixpkgs
|
||||
# based on
|
||||
# https://github.com/NixOS/nixpkgs/blob/f7bf574774e466b984063a44330384cdbca67d6c/pkgs/by-name/ne/nextjs-ollama-llm-ui/package.nix
|
||||
postPatch = ''
|
||||
substituteInPlace src/app/layout.tsx --replace-fail \
|
||||
"{ Figtree, Inter } from \"next/font/google\"" \
|
||||
"localFont from \"next/font/local\""
|
||||
|
||||
substituteInPlace src/app/layout.tsx --replace-fail \
|
||||
"Inter({ subsets: [\"latin\"] })" \
|
||||
"localFont({ src: './Inter.ttf' })"
|
||||
|
||||
cp "${inter}/share/fonts/truetype/InterVariable.ttf" src/app/Inter.ttf
|
||||
'';
|
||||
|
||||
preBuild = ''
|
||||
npx drizzle-kit generate --dialect sqlite --schema ./server/db/schemas/ --out init
|
||||
'';
|
||||
|
||||
installPhase = ''
|
||||
runHook preInstall
|
||||
mkdir -p $out/
|
||||
|
||||
cp -r .next/standalone/* $out/
|
||||
cp -r .next/standalone/.next $out/
|
||||
|
||||
cp -r .next/static $out/.next/static
|
||||
cp -r dist $out/dist
|
||||
cp -r init $out/dist/init
|
||||
|
||||
cp server/db/names.json $out/dist/names.json
|
||||
cp -r public $out/public
|
||||
cp -r node_modules $out/
|
||||
runHook postInstall
|
||||
'';
|
||||
|
||||
meta = {
|
||||
description = "Tunneled reverse proxy server with identity and access control";
|
||||
homepage = "https://github.com/fosrl/pangolin";
|
||||
changelog = "https://github.com/fosrl/pangolin/releases/tag/${version}";
|
||||
license = lib.licenses.agpl3Only;
|
||||
maintainers = with lib.maintainers; [ jackr ];
|
||||
platforms = lib.platforms.linux;
|
||||
};
|
||||
}
|
||||
@@ -10,16 +10,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "gh";
|
||||
version = "2.74.1";
|
||||
version = "2.74.2";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "cli";
|
||||
repo = "cli";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-9Mc0AuwR9F7XU6yjIJ5Z7m7e0b3o7ZjpDdkTc6JMNnQ=";
|
||||
hash = "sha256-6R5BU+snCkO0pwQalWG2cZ6PrfD8fVFXFqqJfVXRd8s=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-S1s+Es7vOvyiPY7RJaMs6joy8QIZ1xY9mR6WvNIs0OY=";
|
||||
vendorHash = "sha256-hliYyuA3gAzyHNwdGg1fygrKam6gNYC2qdvIIu5VOYM=";
|
||||
|
||||
nativeBuildInputs = [ installShellFiles ];
|
||||
|
||||
|
||||
@@ -8,16 +8,16 @@
|
||||
|
||||
rustPlatform.buildRustPackage rec {
|
||||
pname = "gitlab-ci-ls";
|
||||
version = "1.1.0";
|
||||
version = "1.1.1";
|
||||
src = fetchFromGitHub {
|
||||
owner = "alesbrelih";
|
||||
repo = "gitlab-ci-ls";
|
||||
rev = "${version}";
|
||||
hash = "sha256-ULkRF/NtlETStG/Qy0Y7qUAzMvOlOvxErKJ79atgCaw=";
|
||||
hash = "sha256-3DR1MV9YSugWFodLh4wBa6oT8yGEkir0rVm0mcHXpxU=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-1HHwAGN193cNoOktVkrwgS37FJEK++tGMD//RnIALQA=";
|
||||
cargoHash = "sha256-V2ZQLHLIaYJpNeQIZyRq2G5u6/cTJvMXV2301VG21xQ=";
|
||||
|
||||
nativeBuildInputs = [ pkg-config ];
|
||||
buildInputs = [ openssl ];
|
||||
|
||||
@@ -7,13 +7,13 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "glooctl";
|
||||
version = "1.19.0";
|
||||
version = "1.19.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "solo-io";
|
||||
repo = "gloo";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-JRjsxUvJLK3CB7qtRoWvGKdAo486ix98x5+JRhvRrqA=";
|
||||
hash = "sha256-KWy8uqGUj36tiFcS2joMpBb80ZAKFDYasMoFv8ROVdA=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-eXLlcUTxSjyZKla8NosGQbJAz8HrRGmTDJs7onfgwuQ=";
|
||||
|
||||
@@ -8,16 +8,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "gum";
|
||||
version = "0.16.1";
|
||||
version = "0.16.2";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "charmbracelet";
|
||||
repo = "gum";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-3tn126Ars64ZhOY68aCrE7j14YDVGmllbHvYMHAgLR0=";
|
||||
hash = "sha256-Qs7I9AdJx1FwQK+stgLJbXAIiL+zOYCDf1u+kT7u+Bg=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-SsnULG12NjyetLhL7vYjjpDI8vqqdeSyoZj0U3KP/nI=";
|
||||
vendorHash = "sha256-jCJUT7RXXPMgKgP48qip8MxcNB+EkrxUruOAj9WRSQA=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
installShellFiles
|
||||
|
||||
@@ -11,17 +11,17 @@
|
||||
|
||||
rustPlatform.buildRustPackage (finalAttrs: {
|
||||
pname = "is-fast";
|
||||
version = "0.16.2";
|
||||
version = "0.17.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "Magic-JD";
|
||||
repo = "is-fast";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-Wzpd8yA3IpCN3sye1Fk3CUkCihEP6trqPI+oskULS7c=";
|
||||
hash = "sha256-jMRoGGvyKgtu4j9alF9aXfNA/1WOa24CTI0bWZo44Ag=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-+v1cxH1NKF1tjyc7Bqpd77q6Le8CqvtQ5p0H2ICqc1I=";
|
||||
cargoHash = "sha256-UzB6lKXPbN/iUZ2e/ApxTdnu7/nYhvvSIUwGxSopNZ4=";
|
||||
|
||||
nativeBuildInputs = [ pkg-config ];
|
||||
|
||||
|
||||
@@ -6,13 +6,13 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "jumppad";
|
||||
version = "0.20.1";
|
||||
version = "0.21.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "jumppad-labs";
|
||||
repo = "jumppad";
|
||||
rev = version;
|
||||
hash = "sha256-K+HWXtuKe0g8K3SpfbHgKzuTxiz68MSvzeI07fm0O4U=";
|
||||
hash = "sha256-7bc3OmWNLvi+T8xNEwp2aIg/lQ28XrWW4LTcYhEO2xs=";
|
||||
};
|
||||
vendorHash = "sha256-mr7Rnqp2rPIeW9oqNMbxc0SR+l8pPhKm6jk6EEycpRQ=";
|
||||
|
||||
|
||||
@@ -6,16 +6,16 @@
|
||||
|
||||
buildGoModule (finalAttrs: {
|
||||
pname = "jwx";
|
||||
version = "3.0.6";
|
||||
version = "3.0.7";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "lestrrat-go";
|
||||
repo = "jwx";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-D3HhkAEW1vxeq6bQhRLe9+i/0u6CUhR6azWwIpudhBI=";
|
||||
hash = "sha256-vR7QsRAVdYmi7wYGsjuQiB1mABq5jx7mIRFiduJRReA=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-FjNUcNI3A97ngPZBWW+6qL0eCTd10KUGl/AzByXSZt8=";
|
||||
vendorHash = "sha256-fpjkaGkJUi4jrdFvrClx42FF9HwzNW5js3I5HNZChOU=";
|
||||
|
||||
sourceRoot = "${finalAttrs.src.name}/cmd/jwx";
|
||||
|
||||
|
||||
@@ -11,13 +11,13 @@
|
||||
}:
|
||||
python3.pkgs.buildPythonApplication rec {
|
||||
pname = "kcc";
|
||||
version = "7.4.1";
|
||||
version = "7.5.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "ciromattia";
|
||||
repo = "kcc";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-9XYc749dSFNYK61BfuNxH/CJrT/P7YsXNroBsHcsZNA=";
|
||||
hash = "sha256-XB+xss/QiZuo6gWphyjFh9DO74O5tNqfX5LUzsa4gqo=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [ qt6.wrapQtAppsHook ];
|
||||
|
||||
@@ -46,7 +46,7 @@ makeSetupHook {
|
||||
substitutions = {
|
||||
fallbackXdgDirs = "${lib.optionalString includeSettings "${targetPackages.cosmic-settings}/share:"}${targetPackages.cosmic-icons}/share";
|
||||
|
||||
cargoLinkerVar = stdenv.hostPlatform.rust.cargoEnvVarTarget;
|
||||
cargoLinkerVar = targetPackages.stdenv.hostPlatform.rust.cargoEnvVarTarget;
|
||||
# force linking for all libraries that may be dlopen'd by libcosmic/iced apps
|
||||
cargoLinkLibs = lib.escapeShellArgs (
|
||||
[
|
||||
|
||||
@@ -8,13 +8,13 @@
|
||||
}:
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "libxeddsa";
|
||||
version = "2.0.0";
|
||||
version = "2.0.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "Syndace";
|
||||
repo = "libxeddsa";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-kdy+S51nQstRFGw5mIW3TW+WBNynHLpmFC1t6Mc02K4=";
|
||||
hash = "sha256-4xBZ3Ul2Mm5fz/vfulFQmWC6+CQB/egiw7NsC/GrUyw=";
|
||||
};
|
||||
|
||||
strictDeps = true;
|
||||
|
||||
+21
-29
@@ -13,7 +13,7 @@
|
||||
gdbm,
|
||||
gnutls,
|
||||
gss,
|
||||
guile_2_2,
|
||||
guile,
|
||||
libmysqlclient,
|
||||
mailcap,
|
||||
nettools,
|
||||
@@ -21,7 +21,7 @@
|
||||
readline,
|
||||
ncurses,
|
||||
python3,
|
||||
sasl,
|
||||
gsasl,
|
||||
system-sendmail,
|
||||
libxcrypt,
|
||||
mkpasswd,
|
||||
@@ -30,13 +30,13 @@
|
||||
guileSupport ? true,
|
||||
}:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
stdenv.mkDerivation (finalAttrs: {
|
||||
pname = "mailutils";
|
||||
version = "3.18";
|
||||
version = "3.19";
|
||||
|
||||
src = fetchurl {
|
||||
url = "mirror://gnu/${pname}/${pname}-${version}.tar.xz";
|
||||
hash = "sha256-VZBJyNhRYEFSipBsE52bt6YvHQXX5WF/qP4PIxoTFXc=";
|
||||
url = "mirror://gnu/mailutils/mailutils-${finalAttrs.version}.tar.xz";
|
||||
hash = "sha256-UCMNIANsW4rYyWsNmWF38fEz+6THx+O0YtOe6zCEn0U=";
|
||||
};
|
||||
|
||||
separateDebugInfo = true;
|
||||
@@ -67,12 +67,12 @@ stdenv.mkDerivation rec {
|
||||
ncurses
|
||||
pam
|
||||
readline
|
||||
sasl
|
||||
gsasl
|
||||
libxcrypt
|
||||
]
|
||||
++ lib.optionals stdenv.hostPlatform.isLinux [ nettools ]
|
||||
++ lib.optionals pythonSupport [ python3 ]
|
||||
++ lib.optionals guileSupport [ guile_2_2 ];
|
||||
++ lib.optionals guileSupport [ guile ];
|
||||
|
||||
patches = [
|
||||
./fix-build-mb-len-max.patch
|
||||
@@ -81,7 +81,12 @@ stdenv.mkDerivation rec {
|
||||
# https://lists.gnu.org/archive/html/bug-mailutils/2020-11/msg00038.html
|
||||
(fetchpatch {
|
||||
url = "https://lists.gnu.org/archive/html/bug-mailutils/2020-11/txtiNjqcNpqOk.txt";
|
||||
sha256 = "0ghzqb8qx2q8cffbvqzw19mivv7r5f16whplzhm7hdj0j2i6xf6s";
|
||||
hash = "sha256-2rhuopBANngq/PRCboIr+ewdawr8472cYwiLjtHCHz4=";
|
||||
})
|
||||
# Avoid hardeningDisable = [ "format" ]; - this patch is from the project's master branch and can be removed at the next version
|
||||
(fetchpatch {
|
||||
url = "https://cgit.git.savannah.gnu.org/cgit/mailutils.git/patch/?id=9379ec9e25ae6bdbd3d6f5ef9930ac2176d2efe7";
|
||||
hash = "sha256-00R1DLMDPsvz3R6UgRO1ZvgMNCiHYS3lfjqAC9VD+Y4=";
|
||||
})
|
||||
# https://github.com/NixOS/nixpkgs/issues/223967
|
||||
# https://lists.gnu.org/archive/html/bug-mailutils/2023-04/msg00000.html
|
||||
@@ -89,7 +94,7 @@ stdenv.mkDerivation rec {
|
||||
];
|
||||
|
||||
enableParallelBuilding = true;
|
||||
hardeningDisable = [ "format" ];
|
||||
strictDeps = true;
|
||||
|
||||
configureFlags =
|
||||
[
|
||||
@@ -108,23 +113,10 @@ stdenv.mkDerivation rec {
|
||||
dejagnu
|
||||
mkpasswd
|
||||
];
|
||||
|
||||
doCheck = !stdenv.hostPlatform.isDarwin; # ERROR: All 46 tests were run, 46 failed unexpectedly.
|
||||
doInstallCheck = false; # fails
|
||||
|
||||
preCheck = ''
|
||||
# Disable comsat tests that fail without tty in the sandbox.
|
||||
tty -s || echo > comsat/tests/testsuite.at
|
||||
# Remove broken macro
|
||||
sed -i '/AT_TESTED/d' libmu_scm/tests/testsuite.at
|
||||
# Provide libraries for mhn.
|
||||
export LD_LIBRARY_PATH=$(pwd)/lib/.libs
|
||||
'';
|
||||
|
||||
postCheck = ''
|
||||
unset LD_LIBRARY_PATH
|
||||
'';
|
||||
|
||||
meta = with lib; {
|
||||
meta = {
|
||||
description = "Rich and powerful protocol-independent mail framework";
|
||||
|
||||
longDescription = ''
|
||||
@@ -146,17 +138,17 @@ stdenv.mkDerivation rec {
|
||||
and an implementation of MH message handling system.
|
||||
'';
|
||||
|
||||
license = with licenses; [
|
||||
license = with lib.licenses; [
|
||||
lgpl3Plus # libraries
|
||||
gpl3Plus # tools
|
||||
];
|
||||
|
||||
maintainers = with maintainers; [ orivej ];
|
||||
maintainers = with lib.maintainers; [ orivej ];
|
||||
|
||||
homepage = "https://www.gnu.org/software/mailutils/";
|
||||
changelog = "https://git.savannah.gnu.org/cgit/mailutils.git/tree/NEWS";
|
||||
|
||||
# Some of the dependencies fail to build on {cyg,dar}win.
|
||||
platforms = platforms.gnu ++ platforms.unix;
|
||||
platforms = lib.platforms.gnu ++ lib.platforms.unix;
|
||||
};
|
||||
}
|
||||
})
|
||||
@@ -7,7 +7,7 @@
|
||||
|
||||
let
|
||||
pname = "openfga";
|
||||
version = "1.8.15";
|
||||
version = "1.8.16";
|
||||
in
|
||||
|
||||
buildGoModule {
|
||||
@@ -17,7 +17,7 @@ buildGoModule {
|
||||
owner = "openfga";
|
||||
repo = "openfga";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-OZZm2MIXzXc41sHScTUrlVh5g6gfr3stP8rwmUSarAs=";
|
||||
hash = "sha256-ZEEqmQMoq0N45+BZbjjI0hcGncYzXwlzjoZBo3mvfrE=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-S0ecHnHbYRSSA2i5gOOLMsNqs1DHKY5y2u9yMO9wJ88=";
|
||||
|
||||
@@ -8,16 +8,16 @@
|
||||
|
||||
php.buildComposerProject2 (finalAttrs: {
|
||||
pname = "phpdocumentor";
|
||||
version = "3.7.1";
|
||||
version = "3.8.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "phpDocumentor";
|
||||
repo = "phpDocumentor";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-ylwv+tW5Lyx1rooUy7wjinsutGpbLvIvXuLDGWLv24g=";
|
||||
hash = "sha256-5wLfTitHr/6vF4c3o+I+l5ZnJGsjfH82kgml8goqUB4=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-oPhe4yfOdsguXS3dF62mTr0+J1pfphsVJkMKR++c8go=";
|
||||
vendorHash = "sha256-dok1CHFrYVAM5z6k6HvYrHm84khmxDPz1KBUpMQJD/o=";
|
||||
|
||||
nativeBuildInputs = [ makeBinaryWrapper ];
|
||||
|
||||
|
||||
@@ -34,11 +34,11 @@ let
|
||||
in
|
||||
stdenvNoCC.mkDerivation (finalAttrs: {
|
||||
pname = "PortfolioPerformance";
|
||||
version = "0.77.1";
|
||||
version = "0.77.2";
|
||||
|
||||
src = fetchurl {
|
||||
url = "https://github.com/buchen/portfolio/releases/download/${finalAttrs.version}/PortfolioPerformance-${finalAttrs.version}-linux.gtk.x86_64.tar.gz";
|
||||
hash = "sha256-gD8tUOsuce0qxBDByOddoPqCqUkPfgGbbnAa+SLJnVU=";
|
||||
hash = "sha256-3BnCD92gdTgnxCI1haqw4wmFjmtraagSWz/SOzSTlbA=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [
|
||||
|
||||
@@ -8,13 +8,13 @@
|
||||
|
||||
python3Packages.buildPythonApplication rec {
|
||||
pname = "pykickstart";
|
||||
version = "3.64";
|
||||
version = "3.65";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "pykickstart";
|
||||
repo = "pykickstart";
|
||||
tag = "r${version}";
|
||||
hash = "sha256-EDbS06d/lFOSxI/qP7Uovr1qgJqlRyH7gfHnAevHo6o=";
|
||||
hash = "sha256-bRc+zFd7+FjQln710L6c0fZfq68lIb6orTM3EosS7aM=";
|
||||
};
|
||||
|
||||
build-system = with python3Packages; [
|
||||
|
||||
@@ -7,13 +7,13 @@
|
||||
|
||||
python3Packages.buildPythonApplication rec {
|
||||
pname = "pyradio";
|
||||
version = "0.9.3.11.13";
|
||||
version = "0.9.3.11.15";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "coderholic";
|
||||
repo = "pyradio";
|
||||
tag = version;
|
||||
hash = "sha256-thHx1IJLYG83qxV6QSHRn7Jt1a1LUR47noDvAtcFZuE=";
|
||||
hash = "sha256-xOEn01QrVlgXhFdO3YbR5+k7vkez//Y+YSKTI8C4uqA=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [
|
||||
|
||||
@@ -6,13 +6,13 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "rasm";
|
||||
version = "2.3.6";
|
||||
version = "2.3.7";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "EdouardBERGE";
|
||||
repo = "rasm";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-U4bsOU76eNGBSDVEduxqbKqxcq7tIHQZldbe/ElZm+A=";
|
||||
hash = "sha256-KW33PrQply22PYKmz+KLImesSR275SwgLGc/dsBO3Tw=";
|
||||
};
|
||||
|
||||
# by default the EXEC variable contains `rasm.exe`
|
||||
|
||||
@@ -20,13 +20,13 @@
|
||||
|
||||
rustPlatform.buildRustPackage (finalAttrs: {
|
||||
pname = "readest";
|
||||
version = "0.9.59";
|
||||
version = "0.9.60";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "readest";
|
||||
repo = "readest";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-dGtu1BaKfsMOFp4b6S7nNdUrZLZ47c2TQQJ9V6rcjnE=";
|
||||
hash = "sha256-CEY3q9IT2miEO5Q77Mw2BkiyUWuImmCtDrVyjK6HApo=";
|
||||
fetchSubmodules = true;
|
||||
};
|
||||
|
||||
|
||||
@@ -13,16 +13,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "runme";
|
||||
version = "3.14.0";
|
||||
version = "3.14.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "runmedev";
|
||||
repo = "runme";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-QbvnLylk+z25oIEr6yPg41e/XYXKoitIK98LUXyLVeU=";
|
||||
hash = "sha256-il6Wf/3xiWgrv1+4QebhryKtGk8nnBJ6r9eB2r7XNJ4=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-LdEsC7RaJm8LEDhJSTNmT1fPN4NNibOMY1Vxi5z+5b8=";
|
||||
vendorHash = "sha256-DyAFmHUo08bwA83dae8KFgiIzoEhnOtVqCoyp89NFwE=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
installShellFiles
|
||||
|
||||
@@ -14,14 +14,14 @@
|
||||
|
||||
python3Packages.buildPythonApplication rec {
|
||||
pname = "seagoat";
|
||||
version = "1.0.8";
|
||||
version = "1.0.9";
|
||||
pyproject = true;
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "kantord";
|
||||
repo = "SeaGOAT";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-Br51c0RkZtRRazzomLFB6TKqDr5U/en+zDy6SmvWII4=";
|
||||
hash = "sha256-0GVKbPU0Tx7/RyGlh5JLzrQBHny/Och4594hNfAYNpI=";
|
||||
};
|
||||
|
||||
build-system = [ python3Packages.poetry-core ];
|
||||
|
||||
@@ -0,0 +1,26 @@
|
||||
{
|
||||
buildDunePackage,
|
||||
camlp-streams,
|
||||
optint,
|
||||
alcotest,
|
||||
uri,
|
||||
base64,
|
||||
seppo,
|
||||
}:
|
||||
|
||||
buildDunePackage {
|
||||
pname = "mcdb";
|
||||
|
||||
inherit (seppo) version src;
|
||||
|
||||
propagatedBuildInputs = [
|
||||
camlp-streams
|
||||
optint
|
||||
];
|
||||
|
||||
checkInputs = [
|
||||
alcotest
|
||||
uri
|
||||
base64
|
||||
];
|
||||
}
|
||||
@@ -0,0 +1,69 @@
|
||||
{
|
||||
ocamlPackages,
|
||||
fetchFromGitea,
|
||||
ocaml-crunch,
|
||||
seppo,
|
||||
lib,
|
||||
}:
|
||||
|
||||
let
|
||||
mcdb = ocamlPackages.callPackage ./mcdb.nix { inherit seppo; };
|
||||
in
|
||||
|
||||
ocamlPackages.buildDunePackage {
|
||||
pname = "seppo";
|
||||
version = "0-unstable-2025-06-03";
|
||||
|
||||
src = fetchFromGitea {
|
||||
domain = "codeberg.org";
|
||||
owner = "seppo";
|
||||
repo = "seppo";
|
||||
rev = "33ae3e9f61d596fb91d3ab1a91fc26ae80981a93";
|
||||
hash = "sha256-tOIIfYBLcZqQzoPxAVkE8RGX0sugUmDGpxIhIZ5Wy+w=";
|
||||
};
|
||||
|
||||
# Provide git sha to avoid git dependency
|
||||
env.GIT_SHA = seppo.src.rev;
|
||||
|
||||
# Static build fails to find correct static libraries
|
||||
postPatch = ''
|
||||
sed -i 's/-static/""/' bin/gen_flags.sh
|
||||
'';
|
||||
|
||||
nativeBuildInputs = [
|
||||
ocaml-crunch
|
||||
];
|
||||
|
||||
buildInputs = with ocamlPackages; [
|
||||
mcdb
|
||||
|
||||
camlp-streams
|
||||
cohttp-lwt-unix
|
||||
crunch
|
||||
csexp
|
||||
decoders-ezjsonm
|
||||
lambdasoup
|
||||
lwt_ppx
|
||||
mirage-crypto-rng
|
||||
ocaml_sqlite3
|
||||
optint
|
||||
safepass
|
||||
timedesc
|
||||
tls-lwt
|
||||
tyre
|
||||
uucp
|
||||
uuidm
|
||||
uunf
|
||||
uutf
|
||||
x509
|
||||
xmlm
|
||||
];
|
||||
|
||||
meta = {
|
||||
homepage = "https://seppo.mro.name";
|
||||
description = "Personal Social Web";
|
||||
license = lib.licenses.gpl3Plus;
|
||||
maintainers = with lib.maintainers; [ infinidoge ];
|
||||
mainProgram = "seppo";
|
||||
};
|
||||
}
|
||||
@@ -13,13 +13,13 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "signalbackup-tools";
|
||||
version = "20250617";
|
||||
version = "20250622-1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "bepaald";
|
||||
repo = "signalbackup-tools";
|
||||
rev = version;
|
||||
hash = "sha256-sX/JM8d0kex09OT8n4IF26+bSPwvTjarqoiRTknA2Og=";
|
||||
hash = "sha256-QLlnIrlWGbPPD2ZgmvzX28UkVSQHcEUoL/XmajgFs6o=";
|
||||
};
|
||||
|
||||
nativeBuildInputs =
|
||||
|
||||
@@ -14,17 +14,17 @@
|
||||
|
||||
rustPlatform.buildRustPackage (finalAttrs: {
|
||||
pname = "spider";
|
||||
version = "2.37.104";
|
||||
version = "2.37.120";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "spider-rs";
|
||||
repo = "spider";
|
||||
tag = "v${finalAttrs.version}";
|
||||
hash = "sha256-u9Xbn+BK6pzMh2m02WKimVPRWTOuYPAf3IeQvKGyrv0=";
|
||||
hash = "sha256-Aa041j8BHJ6s+R5zy8LYBo7rVKY9Xp2L9q4GdPS5Bo4=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-HU15of5imnk609GF+RtlYpxQwgfEy8+6cbjl4RuytBw=";
|
||||
cargoHash = "sha256-Xnd4vqs8GwIlmC6HYZtC7xehF6HNkjs35QocCIZmQe8=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
pkg-config
|
||||
|
||||
@@ -6,17 +6,17 @@
|
||||
}:
|
||||
rustPlatform.buildRustPackage rec {
|
||||
pname = "tabiew";
|
||||
version = "0.9.4";
|
||||
version = "0.10.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "shshemi";
|
||||
repo = "tabiew";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-5zeYqSWM/EbwjX7nHqMhERivk0gVra0QntYNh1dIp5Y=";
|
||||
hash = "sha256-d9tMqZ5pbFK+AuSh3L5NxeRAn8KgvVmTEQaJ02E3pSg=";
|
||||
};
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-Yic8maNIjo4Kg6nZ29dtN2PougtOa2WCMMMUiIt9iEs=";
|
||||
cargoHash = "sha256-SnFVIL3VQO1xjVygepZEvWgNX1vBTbDL0YxKUvHizu0=";
|
||||
|
||||
nativeBuildInputs = [ installShellFiles ];
|
||||
|
||||
|
||||
@@ -48,11 +48,11 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "trafficserver";
|
||||
version = "9.2.10";
|
||||
version = "9.2.11";
|
||||
|
||||
src = fetchzip {
|
||||
url = "mirror://apache/trafficserver/trafficserver-${version}.tar.bz2";
|
||||
hash = "sha256-SS/xug6YwjGKjlZzuH/oqolrtYG03BER/52fCgBj/dw=";
|
||||
hash = "sha256-WFABr7+JsUbQagLFK0OXZ20t4QCuYrozeaV4fKO/c2s=";
|
||||
};
|
||||
|
||||
# NOTE: The upstream README indicates that flex is needed for some features,
|
||||
|
||||
@@ -12,13 +12,13 @@
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "treesheets";
|
||||
version = "0-unstable-2025-06-09";
|
||||
version = "0-unstable-2025-06-21";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "aardappel";
|
||||
repo = "treesheets";
|
||||
rev = "6a1cd3b0eec3f9048c21cc7bfca52ebeaa1e29d4";
|
||||
hash = "sha256-5zAOnz5+CCJzlUNK9DhIFy44OE4q+ZZq6AGY40IpZQ8=";
|
||||
rev = "ebde5f2fbef4e3a05774b4c343f94cde2f9f0a60";
|
||||
hash = "sha256-mTJ937w1ZkZB1+kG9AWVBVRRpkaRjFqavIGwmEHvsHU=";
|
||||
};
|
||||
|
||||
nativeBuildInputs = [
|
||||
|
||||
@@ -5,7 +5,7 @@
|
||||
}:
|
||||
|
||||
let
|
||||
version = "0.7.0";
|
||||
version = "0.7.1";
|
||||
in
|
||||
buildGoModule {
|
||||
pname = "vault-unseal";
|
||||
@@ -15,10 +15,10 @@ buildGoModule {
|
||||
owner = "lrstanley";
|
||||
repo = "vault-unseal";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-+9o2+6PwRZjCaJnr2sriTk74cWZXURMndusakd4Vd8g=";
|
||||
hash = "sha256-6beLN+Qw1rXGTEAjUco7xkMzQTFUniJ6pwucDTLKei8=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-UDYybx9oA9iKkfs6ELDEFhMq3WBrwWXbxSHQyS7E3Cs=";
|
||||
vendorHash = "sha256-hhTJB1g35vB5dLOEY7V7V5ma7Zzyq2bo9kk3gpEcEsY=";
|
||||
|
||||
meta = {
|
||||
changelog = "https://github.com/lrstanley/vault-unseal/releases/tag/v${version}";
|
||||
|
||||
@@ -77,6 +77,7 @@ python.pkgs.buildPythonApplication rec {
|
||||
pathspec
|
||||
psutil
|
||||
pygments
|
||||
python-dotenv
|
||||
sentence-transformers
|
||||
shtab
|
||||
tabulate
|
||||
@@ -112,6 +113,16 @@ python.pkgs.buildPythonApplication rec {
|
||||
installShellCompletion vectorcode.{bash,zsh}
|
||||
'';
|
||||
|
||||
postFixup = ''
|
||||
wrapProgram $out/bin/vectorcode \
|
||||
--prefix PYTHONPATH : "$PYTHONPATH" \
|
||||
--set PATH ${
|
||||
lib.makeBinPath [
|
||||
python
|
||||
]
|
||||
};
|
||||
'';
|
||||
|
||||
pythonImportsCheck = [ "vectorcode" ];
|
||||
|
||||
nativeCheckInputs =
|
||||
|
||||
@@ -16,13 +16,13 @@
|
||||
|
||||
rustPlatform.buildRustPackage rec {
|
||||
pname = "wluma";
|
||||
version = "4.9.0";
|
||||
version = "4.10.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "maximbaz";
|
||||
repo = "wluma";
|
||||
tag = version;
|
||||
hash = "sha256-K/AJP+2J+u83sCCbyXvCLh51Ip979nSnb0bjT22Y2+0=";
|
||||
hash = "sha256-gO7l0VnOs6BoBxZKkkXyxiBP7JB+G8ScrfuADNveys4=";
|
||||
};
|
||||
|
||||
postPatch = ''
|
||||
@@ -35,7 +35,7 @@ rustPlatform.buildRustPackage rec {
|
||||
'';
|
||||
|
||||
useFetchCargoVendor = true;
|
||||
cargoHash = "sha256-+uJ9SytwucYiuzTwdKTAfHb81LyV9NZmGOlzm6Qjftw=";
|
||||
cargoHash = "sha256-UFe+/qJ9jCJ0QtSeY9QFT8VPXQGWIG2tqay+WE2rhKU=";
|
||||
|
||||
nativeBuildInputs = [
|
||||
makeWrapper
|
||||
|
||||
@@ -6,16 +6,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "zfind";
|
||||
version = "0.4.6";
|
||||
version = "0.4.7";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "laktak";
|
||||
repo = "zfind";
|
||||
rev = "v${version}";
|
||||
hash = "sha256-bbeS2x9HzrsOE5h1y07LoEBm9dinMCHX9GJftj5Md9s=";
|
||||
hash = "sha256-zp2YrrvghmXy0LPxCSkOxYwrmoGabTKCD5CiFl3XCOU=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-blq0/pRppdf2jcuhIqYeNhcazFNZOGeEjPTSLgHqhrU=";
|
||||
vendorHash = "sha256-kSqzjRXCr92c6CzQpRf3Ny+SEp3O15fKk0NgmTHtxSY=";
|
||||
|
||||
ldflags = [
|
||||
"-X"
|
||||
|
||||
@@ -11,12 +11,12 @@
|
||||
rebar3Relx rec {
|
||||
releaseType = "escript";
|
||||
pname = "elvis-erlang";
|
||||
version = "4.0.0";
|
||||
version = "4.1.1";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "inaka";
|
||||
repo = "elvis";
|
||||
hash = "sha256-HJH/p8EHE4zor0LOczpOlDy6sPSI+WVWIS22hGhjQ0s=";
|
||||
hash = "sha256-9aOJpKYb+M07bi6aEMt5Gtr/edOGm+jyA8bxiLyUd0g=";
|
||||
tag = version;
|
||||
};
|
||||
|
||||
|
||||
@@ -14,11 +14,11 @@ let
|
||||
packages = with self; {
|
||||
unicode_util_compat = builder {
|
||||
name = "unicode_util_compat";
|
||||
version = "0.7.0";
|
||||
version = "0.7.1";
|
||||
src = fetchHex {
|
||||
pkg = "unicode_util_compat";
|
||||
version = "0.7.0";
|
||||
sha256 = "sha256-Je7m1n32GWDPanlCOVZlmbCeF+Zo03ACR7xJhjgVJSE=";
|
||||
version = "0.7.1";
|
||||
sha256 = "sha256-s6kXhUzjriM2GXRK0eAQLgVnMTZ3b7L6diNPPgOyNkI=";
|
||||
};
|
||||
beamDeps = [ ];
|
||||
};
|
||||
@@ -44,11 +44,11 @@ let
|
||||
};
|
||||
mimerl = builder {
|
||||
name = "mimerl";
|
||||
version = "1.3.0";
|
||||
version = "1.4.0";
|
||||
src = fetchHex {
|
||||
pkg = "mimerl";
|
||||
version = "1.3.0";
|
||||
sha256 = "sha256-oeFaUNGIchfelfC5sHk+MoU/fCWKXNInZQiJs4g5/p0=";
|
||||
version = "1.4.0";
|
||||
sha256 = "sha256-E68V+faMZYhOzKOjiR1Qp7V9ghUnkvPhnYhlCqEmsUQ=";
|
||||
};
|
||||
beamDeps = [ ];
|
||||
};
|
||||
@@ -74,11 +74,11 @@ let
|
||||
};
|
||||
certifi = builder {
|
||||
name = "certifi";
|
||||
version = "2.13.0";
|
||||
version = "2.15.0";
|
||||
src = fetchHex {
|
||||
pkg = "certifi";
|
||||
version = "2.13.0";
|
||||
sha256 = "sha256-jz2VM6DwYHCv39XVlrMuIcZYBmekkokYUbDic3vFB6E=";
|
||||
version = "2.15.0";
|
||||
sha256 = "sha256-sUftIs5x1y6v2tlPBVFlwcGC9hov9J3yi8xx0dW5SmA=";
|
||||
};
|
||||
beamDeps = [ ];
|
||||
};
|
||||
@@ -104,11 +104,11 @@ let
|
||||
};
|
||||
katana_code = builder {
|
||||
name = "katana_code";
|
||||
version = "2.1.1";
|
||||
version = "2.4.1";
|
||||
src = fetchHex {
|
||||
pkg = "katana_code";
|
||||
version = "2.1.1";
|
||||
sha256 = "sha256-BoDzNSW5qILm9NMCJRixXEb2SL17Db6GkAmA/hwpFAQ=";
|
||||
version = "2.4.1";
|
||||
sha256 = "sha256-WO/GO12dq8giMMq1DN5/eyWSh6aQ7Wmfeaf6gPSbCzo=";
|
||||
};
|
||||
beamDeps = [ ];
|
||||
};
|
||||
@@ -162,11 +162,11 @@ let
|
||||
};
|
||||
elvis_core = builder {
|
||||
name = "elvis_core";
|
||||
version = "4.0.0";
|
||||
version = "4.1.1";
|
||||
src = fetchHex {
|
||||
pkg = "elvis_core";
|
||||
version = "4.0.0";
|
||||
sha256 = "sha256-+i7jDyRkRm01mfsfz6phXImVn8UBmkVhnvett+1CC+U=";
|
||||
version = "4.1.1";
|
||||
sha256 = "sha256-gKViV0uNl0oudUTpqUVXFtBMngldvIyJFeJGgDHdE4U=";
|
||||
};
|
||||
beamDeps = [
|
||||
katana_code
|
||||
|
||||
@@ -185,6 +185,10 @@ stdenv.mkDerivation (
|
||||
# other bytes.
|
||||
+ ''
|
||||
sed -i "s,/usr/bin/sed,sed\x00\x00\x00\x00\x00\x00\x00\x00\x00," libexec/gcc/${upstreamTriplet}/${gccVersion}/install-tools/fixincl
|
||||
''
|
||||
# Make sure that collect2 finds binutils-wrapper instead of the included ld binary.
|
||||
+ ''
|
||||
rm -f bin/ld ${upstreamTriplet}/bin/ld
|
||||
'';
|
||||
|
||||
installPhase =
|
||||
|
||||
@@ -3,20 +3,17 @@
|
||||
buildPythonPackage,
|
||||
fetchPypi,
|
||||
setuptools-scm,
|
||||
pythonOlder,
|
||||
}:
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "adafruit-platformdetect";
|
||||
version = "3.79.0";
|
||||
version = "3.80.0";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.7";
|
||||
|
||||
src = fetchPypi {
|
||||
pname = "adafruit_platformdetect";
|
||||
inherit version;
|
||||
hash = "sha256-E/UixKuSRBYAw/R/15WxYQpkYDSSLs0svB4gfGTDz38=";
|
||||
hash = "sha256-b/qdAm0WhWdMp0GcF0qrn8R1yPiYA192gpL/kHD/qQs=";
|
||||
};
|
||||
|
||||
build-system = [ setuptools-scm ];
|
||||
@@ -30,7 +27,7 @@ buildPythonPackage rec {
|
||||
description = "Platform detection for use by Adafruit libraries";
|
||||
homepage = "https://github.com/adafruit/Adafruit_Python_PlatformDetect";
|
||||
changelog = "https://github.com/adafruit/Adafruit_Python_PlatformDetect/releases/tag/${version}";
|
||||
license = with licenses; [ mit ];
|
||||
license = licenses.mit;
|
||||
maintainers = with maintainers; [ fab ];
|
||||
};
|
||||
}
|
||||
|
||||
@@ -20,7 +20,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "aioautomower";
|
||||
version = "2025.5.1";
|
||||
version = "2025.6.0";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.11";
|
||||
@@ -29,7 +29,7 @@ buildPythonPackage rec {
|
||||
owner = "Thomas55555";
|
||||
repo = "aioautomower";
|
||||
tag = version;
|
||||
hash = "sha256-Fia08yBmixR47WZMuNbBg+u8CyHG8lumfWJeB/EKd78=";
|
||||
hash = "sha256-6V3utjqCLQmO2iuWdn6kE8oz9XcJ/sCfeSMWmxL/2NE=";
|
||||
};
|
||||
|
||||
postPatch = ''
|
||||
|
||||
@@ -20,7 +20,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "asf-search";
|
||||
version = "9.0.1";
|
||||
version = "9.0.2";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.9";
|
||||
@@ -29,7 +29,7 @@ buildPythonPackage rec {
|
||||
owner = "asfadmin";
|
||||
repo = "Discovery-asf_search";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-nh2r4XiJ+cxPpQ5IBT2PMKpZPwYbhl67B7wwYFRJ6eY=";
|
||||
hash = "sha256-RJeo5dMq2HoOmHN+PN0NzgWJKMApcGvMr/OxOjZYOS4=";
|
||||
};
|
||||
|
||||
pythonRelaxDeps = [ "tenacity" ];
|
||||
|
||||
@@ -64,6 +64,9 @@ buildPythonPackage rec {
|
||||
|
||||
disabledTests =
|
||||
[
|
||||
# ValueError: dtype attribute is not a valid dtype instance
|
||||
"test_vonmises_regression"
|
||||
|
||||
# AssertionError: assert (<xarray.DataArray 'yield' ()> Size: 1B\narray(False) & <xarray.DataArray 'yield' ()> Size: 1B\narray(False))
|
||||
# https://github.com/bambinos/bambi/issues/888
|
||||
"test_beta_regression"
|
||||
|
||||
@@ -17,7 +17,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "bloodyad";
|
||||
version = "2.1.18";
|
||||
version = "2.1.20";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.8";
|
||||
@@ -26,7 +26,7 @@ buildPythonPackage rec {
|
||||
owner = "CravateRouge";
|
||||
repo = "bloodyAD";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-4/5cAYt3IhRxbd8bSXlyvCOCMLIJjWxWnke0vslyD2Y=";
|
||||
hash = "sha256-mPomYeGuTbj5cKR+/null7EIjuSVsNbKqnPIqAOkZQY=";
|
||||
};
|
||||
|
||||
pythonRelaxDeps = [ "cryptography" ];
|
||||
@@ -68,7 +68,7 @@ buildPythonPackage rec {
|
||||
meta = with lib; {
|
||||
description = "Module for Active Directory Privilege Escalations";
|
||||
homepage = "https://github.com/CravateRouge/bloodyAD";
|
||||
changelog = "https://github.com/CravateRouge/bloodyAD/releases/tag/v${version}";
|
||||
changelog = "https://github.com/CravateRouge/bloodyAD/releases/tag/${src.tag}";
|
||||
license = licenses.mit;
|
||||
maintainers = with maintainers; [ fab ];
|
||||
};
|
||||
|
||||
@@ -12,13 +12,13 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "dvc-s3";
|
||||
version = "3.2.1";
|
||||
version = "3.2.2";
|
||||
pyproject = true;
|
||||
|
||||
src = fetchPypi {
|
||||
pname = "dvc_s3";
|
||||
inherit version;
|
||||
hash = "sha256-Q232TQJQaWOwIl1SctlZGFlfX4awrVqb7usQW7KsPSQ=";
|
||||
hash = "sha256-Dqcsm2sADf6hqDTUEGczts3HRdCm7h1cCluMg0RnFxY=";
|
||||
};
|
||||
|
||||
# Prevent circular dependency
|
||||
|
||||
@@ -17,14 +17,14 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "gliner";
|
||||
version = "0.2.20";
|
||||
version = "0.2.21";
|
||||
pyproject = true;
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "urchade";
|
||||
repo = "GLiNER";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-aWBDnaiq9Z30YT4sszEVk1WAyU4aH8SFD6ESOBkT2ds=";
|
||||
tag = version;
|
||||
hash = "sha256-v8Q/+et9yWeVSWt1K9Ahg3I4dz5/Ft+o1ueNOSaGEOU=";
|
||||
};
|
||||
|
||||
build-system = [
|
||||
@@ -48,7 +48,7 @@ buildPythonPackage rec {
|
||||
meta = {
|
||||
description = "Generalist and Lightweight Model for Named Entity Recognition";
|
||||
homepage = "https://github.com/urchade/GLiNER";
|
||||
changelog = "https://github.com/urchade/GLiNER/releases/tag/v${version}";
|
||||
changelog = "https://github.com/urchade/GLiNER/releases/tag/${src.tag}";
|
||||
license = lib.licenses.asl20;
|
||||
maintainers = with lib.maintainers; [ GaetanLepage ];
|
||||
badPlatforms = [
|
||||
|
||||
@@ -23,14 +23,14 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "nanoemoji";
|
||||
version = "0.15.7";
|
||||
version = "0.15.8";
|
||||
pyproject = true;
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "googlefonts";
|
||||
repo = "nanoemoji";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-QdovfpCICDWzNAotXBypk2pvylGrLC4s45OFLalnBSo=";
|
||||
hash = "sha256-QufiPTVb4bjWgb76DOOt0u4WGiZkbYC7oKkwxv3S8us=";
|
||||
};
|
||||
|
||||
patches = [
|
||||
|
||||
@@ -6,7 +6,6 @@
|
||||
setuptools-scm,
|
||||
gmt,
|
||||
numpy,
|
||||
netcdf4,
|
||||
pandas,
|
||||
packaging,
|
||||
xarray,
|
||||
@@ -18,7 +17,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "pygmt";
|
||||
version = "0.15.0";
|
||||
version = "0.16.0";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.11";
|
||||
@@ -27,7 +26,7 @@ buildPythonPackage rec {
|
||||
owner = "GenericMappingTools";
|
||||
repo = "pygmt";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-sse1Cxzsrhg9X9zH/XSUtF/7YHrSUHYGtn4qoq5qdM4=";
|
||||
hash = "sha256-VzsSBdKQDSXCFC61eCD6e45GLpVcKjRo3rx+cT/A7Jc=";
|
||||
};
|
||||
|
||||
postPatch = ''
|
||||
@@ -39,7 +38,6 @@ buildPythonPackage rec {
|
||||
|
||||
dependencies = [
|
||||
numpy
|
||||
netcdf4
|
||||
pandas
|
||||
packaging
|
||||
xarray
|
||||
|
||||
@@ -82,72 +82,81 @@ buildPythonPackage rec {
|
||||
rm -rf pytensor
|
||||
'';
|
||||
|
||||
disabledTests = lib.optionals stdenv.hostPlatform.isDarwin [
|
||||
# pytensor.link.c.exceptions.CompileError: Compilation failed (return status=1)
|
||||
"OpFromGraph"
|
||||
"add"
|
||||
"cls_ofg1"
|
||||
"direct"
|
||||
"multiply"
|
||||
"test_AddDS"
|
||||
"test_AddSD"
|
||||
"test_AddSS"
|
||||
"test_MulDS"
|
||||
"test_MulSD"
|
||||
"test_MulSS"
|
||||
"test_NoOutputFromInplace"
|
||||
"test_OpFromGraph"
|
||||
"test_adv_sub1_sparse_grad"
|
||||
"test_alloc"
|
||||
"test_binary"
|
||||
"test_borrow_input"
|
||||
"test_borrow_output"
|
||||
"test_cache_race_condition"
|
||||
"test_check_for_aliased_inputs"
|
||||
"test_clinker_literal_cache"
|
||||
"test_csm_grad"
|
||||
"test_csm_unsorted"
|
||||
"test_csr_dense_grad"
|
||||
"test_debugprint"
|
||||
"test_ellipsis_einsum"
|
||||
"test_empty_elemwise"
|
||||
"test_flatten"
|
||||
"test_fprop"
|
||||
"test_get_item_list_grad"
|
||||
"test_grad"
|
||||
"test_infer_shape"
|
||||
"test_jax_pad"
|
||||
"test_kron"
|
||||
"test_masked_input"
|
||||
"test_max"
|
||||
"test_modes"
|
||||
"test_mul_s_v_grad"
|
||||
"test_multiple_outputs"
|
||||
"test_not_inplace"
|
||||
"test_numba_Cholesky_grad"
|
||||
"test_numba_pad"
|
||||
"test_optimizations_preserved"
|
||||
"test_overided_function"
|
||||
"test_potential_output_aliasing_induced_by_updates"
|
||||
"test_profiling"
|
||||
"test_rebuild_strict"
|
||||
"test_runtime_broadcast_c"
|
||||
"test_scan_err1"
|
||||
"test_scan_err2"
|
||||
"test_shared"
|
||||
"test_size_implied_by_broadcasted_parameters"
|
||||
"test_solve_triangular_grad"
|
||||
"test_structured_add_s_v_grad"
|
||||
"test_structureddot_csc_grad"
|
||||
"test_structureddot_csr_grad"
|
||||
"test_sum"
|
||||
"test_swap_SharedVariable_with_given"
|
||||
"test_test_value_op"
|
||||
"test_unary"
|
||||
"test_unbroadcast"
|
||||
"test_update_equiv"
|
||||
"test_update_same"
|
||||
];
|
||||
disabledTests =
|
||||
[
|
||||
# ValueError: dtype attribute is not a valid dtype instance
|
||||
"test_AddDS"
|
||||
"test_AddSD"
|
||||
"test_add_sd"
|
||||
"test_grad"
|
||||
"test_rop"
|
||||
]
|
||||
++ lib.optionals stdenv.hostPlatform.isDarwin [
|
||||
# pytensor.link.c.exceptions.CompileError: Compilation failed (return status=1)
|
||||
"OpFromGraph"
|
||||
"add"
|
||||
"cls_ofg1"
|
||||
"direct"
|
||||
"multiply"
|
||||
"test_AddDS"
|
||||
"test_AddSD"
|
||||
"test_AddSS"
|
||||
"test_MulDS"
|
||||
"test_MulSD"
|
||||
"test_MulSS"
|
||||
"test_NoOutputFromInplace"
|
||||
"test_OpFromGraph"
|
||||
"test_adv_sub1_sparse_grad"
|
||||
"test_alloc"
|
||||
"test_binary"
|
||||
"test_borrow_input"
|
||||
"test_borrow_output"
|
||||
"test_cache_race_condition"
|
||||
"test_check_for_aliased_inputs"
|
||||
"test_clinker_literal_cache"
|
||||
"test_csm_grad"
|
||||
"test_csm_unsorted"
|
||||
"test_csr_dense_grad"
|
||||
"test_debugprint"
|
||||
"test_ellipsis_einsum"
|
||||
"test_empty_elemwise"
|
||||
"test_flatten"
|
||||
"test_fprop"
|
||||
"test_get_item_list_grad"
|
||||
"test_grad"
|
||||
"test_infer_shape"
|
||||
"test_jax_pad"
|
||||
"test_kron"
|
||||
"test_masked_input"
|
||||
"test_max"
|
||||
"test_modes"
|
||||
"test_mul_s_v_grad"
|
||||
"test_multiple_outputs"
|
||||
"test_not_inplace"
|
||||
"test_numba_Cholesky_grad"
|
||||
"test_numba_pad"
|
||||
"test_optimizations_preserved"
|
||||
"test_overided_function"
|
||||
"test_potential_output_aliasing_induced_by_updates"
|
||||
"test_profiling"
|
||||
"test_rebuild_strict"
|
||||
"test_runtime_broadcast_c"
|
||||
"test_scan_err1"
|
||||
"test_scan_err2"
|
||||
"test_shared"
|
||||
"test_size_implied_by_broadcasted_parameters"
|
||||
"test_solve_triangular_grad"
|
||||
"test_structured_add_s_v_grad"
|
||||
"test_structureddot_csc_grad"
|
||||
"test_structureddot_csr_grad"
|
||||
"test_sum"
|
||||
"test_swap_SharedVariable_with_given"
|
||||
"test_test_value_op"
|
||||
"test_unary"
|
||||
"test_unbroadcast"
|
||||
"test_update_equiv"
|
||||
"test_update_same"
|
||||
];
|
||||
|
||||
disabledTestPaths = [
|
||||
# Don't run the most compute-intense tests
|
||||
|
||||
@@ -18,7 +18,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "qdrant-client";
|
||||
version = "1.14.2";
|
||||
version = "1.14.3";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.7";
|
||||
@@ -27,7 +27,7 @@ buildPythonPackage rec {
|
||||
owner = "qdrant";
|
||||
repo = "qdrant-client";
|
||||
tag = "v${version}";
|
||||
hash = "sha256-JohJbKIZfPG3qqjF8T1EmeS1sZALCglEIcsWiNSn/QE=";
|
||||
hash = "sha256-OcSR8iYwX1az5BFVNp6xHpVE//Nyk4Nk97SaxAMJQRI=";
|
||||
};
|
||||
|
||||
build-system = [ poetry-core ];
|
||||
|
||||
@@ -10,7 +10,7 @@
|
||||
|
||||
buildPythonPackage rec {
|
||||
pname = "tencentcloud-sdk-python";
|
||||
version = "3.0.1405";
|
||||
version = "3.0.1406";
|
||||
pyproject = true;
|
||||
|
||||
disabled = pythonOlder "3.9";
|
||||
@@ -19,7 +19,7 @@ buildPythonPackage rec {
|
||||
owner = "TencentCloud";
|
||||
repo = "tencentcloud-sdk-python";
|
||||
tag = version;
|
||||
hash = "sha256-cFEuSlOZMUBgUT7KeWBODtCnT+Pog75hkyavwvqzVEU=";
|
||||
hash = "sha256-trRgXXaXeGUcFA/ZRuMz9+EnTx/JUSa5+e5YX2yn8xY=";
|
||||
};
|
||||
|
||||
build-system = [ setuptools ];
|
||||
|
||||
@@ -1043,8 +1043,8 @@
|
||||
},
|
||||
"IlluminaHumanMethylationMSAmanifest": {
|
||||
"name": "IlluminaHumanMethylationMSAmanifest",
|
||||
"version": "0.1.0",
|
||||
"sha256": "01q7i5a2zc9pby9ivsqq8pdp80732akq4g8d594h9dn6qgm0znz3",
|
||||
"version": "0.1.1",
|
||||
"sha256": "1ksw8nr4ghvih4imc9bj7xm1wvnw5wg4mhzw8mcvdvw3bjz4ly64",
|
||||
"depends": ["minfi"]
|
||||
},
|
||||
"JASPAR2018": {
|
||||
|
||||
@@ -555,6 +555,12 @@
|
||||
"sha256": "0rmp259r5n0dqf8zn9wwfqlcbdan1qs3ni0f4izv4nj3mym435y9",
|
||||
"depends": ["ExperimentHub", "S4Vectors", "SummarizedExperiment"]
|
||||
},
|
||||
"Hiiragi2013": {
|
||||
"name": "Hiiragi2013",
|
||||
"version": "1.44.2",
|
||||
"sha256": "0kl423kr19ai4kz7a5dv3d0swgzp3911pgxyp8qf8kgy952a1rr1",
|
||||
"depends": ["Biobase", "KEGGREST", "MASS", "RColorBrewer", "affy", "boot", "clue", "cluster", "genefilter", "geneplotter", "gplots", "gtools", "lattice", "latticeExtra", "mouse4302_db", "xtable"]
|
||||
},
|
||||
"HumanAffyData": {
|
||||
"name": "HumanAffyData",
|
||||
"version": "1.34.0",
|
||||
@@ -905,8 +911,8 @@
|
||||
},
|
||||
"ProteinGymR": {
|
||||
"name": "ProteinGymR",
|
||||
"version": "1.2.0",
|
||||
"sha256": "0li7kra2p2hg77x2jsy96dz0q052lf05kr9y4v3r35p62rzhnc35",
|
||||
"version": "1.2.1",
|
||||
"sha256": "1xwva9gnfldgx2bw62zwz3wlc84k4jlnybq81nr0xqa6xdr9fycl",
|
||||
"depends": ["AnnotationHub", "ComplexHeatmap", "ExperimentHub", "bio3d", "circlize", "dplyr", "forcats", "ggExtra", "ggdist", "gghalves", "ggplot2", "htmltools", "lifecycle", "pals", "purrr", "queryup", "r3dmol", "rlang", "spdl", "stringr", "tidyr", "tidyselect"]
|
||||
},
|
||||
"PtH2O2lipids": {
|
||||
@@ -2471,8 +2477,8 @@
|
||||
},
|
||||
"systemPipeRdata": {
|
||||
"name": "systemPipeRdata",
|
||||
"version": "2.12.0",
|
||||
"sha256": "04xxwdcznxdhxhmn73b9njj0mrd5bn3bwznnx5wf3p5qkfdckl9g",
|
||||
"version": "2.12.2",
|
||||
"sha256": "12vxhm096gwy026gnh1ql1749gpxdsch70x3bc2a2pcnc74kk2hf",
|
||||
"depends": ["BiocGenerics", "Biostrings", "jsonlite", "remotes"]
|
||||
},
|
||||
"tartare": {
|
||||
@@ -2632,13 +2638,6 @@
|
||||
"depends": ["AnnotationDbi", "Biobase", "GGBase", "illuminaHumanv1_db", "snpStats"],
|
||||
"broken": true
|
||||
},
|
||||
"Hiiragi2013": {
|
||||
"name": "Hiiragi2013",
|
||||
"version": "1.41.0",
|
||||
"sha256": "0z8ns2qsnng3kvzcris3hxggy1jmzrl8jwy0ndf6sbn1cqj1pnkl",
|
||||
"depends": ["Biobase", "KEGGREST", "MASS", "RColorBrewer", "affy", "boot", "clue", "cluster", "genefilter", "geneplotter", "gplots", "gtools", "lattice", "latticeExtra", "mouse4302_db", "xtable"],
|
||||
"broken": true
|
||||
},
|
||||
"MAQCsubsetAFX": {
|
||||
"name": "MAQCsubsetAFX",
|
||||
"version": "1.8.0",
|
||||
|
||||
@@ -95,8 +95,8 @@
|
||||
},
|
||||
"ANCOMBC": {
|
||||
"name": "ANCOMBC",
|
||||
"version": "2.10.0",
|
||||
"sha256": "00ywqww9vhsxsx2y4ji8k3b9202f187a54nkafl6wa10yqqnvqcq",
|
||||
"version": "2.10.1",
|
||||
"sha256": "16cfr7q1ivksmajrfx5gv75z83aza443lw11as2nf8pbsfjwfgrf",
|
||||
"depends": ["CVXR", "DescTools", "Hmisc", "MASS", "Matrix", "Rdpack", "doParallel", "doRNG", "energy", "foreach", "gtools", "lme4", "lmerTest", "multcomp", "nloptr"]
|
||||
},
|
||||
"ANF": {
|
||||
@@ -239,8 +239,8 @@
|
||||
},
|
||||
"AnVIL": {
|
||||
"name": "AnVIL",
|
||||
"version": "1.20.0",
|
||||
"sha256": "1rwfp8hw7dziqlg3fj93kgdm96xirba0sv5cvjhfnnwx09ghpsmy",
|
||||
"version": "1.20.1",
|
||||
"sha256": "0sy545m0bp76kf34cwm06bfhagf4pcn3bb7d7xsyvnm7zb8p8kzl",
|
||||
"depends": ["AnVILBase", "BiocBaseUtils", "DT", "dplyr", "futile_logger", "htmltools", "httr", "jsonlite", "miniUI", "rapiclient", "rlang", "shiny", "tibble", "tidyr", "tidyselect", "yaml"]
|
||||
},
|
||||
"AnVILAz": {
|
||||
@@ -323,8 +323,8 @@
|
||||
},
|
||||
"ArrayExpress": {
|
||||
"name": "ArrayExpress",
|
||||
"version": "1.67.1",
|
||||
"sha256": "1cnlr2xnah4cw66xn5ww3ci1flfhrwwd0k3z5l1fbh8h9msnbr3w",
|
||||
"version": "1.68.0",
|
||||
"sha256": "0wiaczf6qvi5qaidjp7hlfh5d054dswalgwrf9a4xd6407nx6nj5",
|
||||
"depends": ["Biobase", "httr", "jsonlite", "limma", "oligo", "rlang"]
|
||||
},
|
||||
"AssessORF": {
|
||||
@@ -527,8 +527,8 @@
|
||||
},
|
||||
"BayesSpace": {
|
||||
"name": "BayesSpace",
|
||||
"version": "1.17.0",
|
||||
"sha256": "1ybf17zggvl7s1k6bgxskyna42fylnggv4wy7xvkglnfmv8rz5lp",
|
||||
"version": "1.18.1",
|
||||
"sha256": "0br1mkb32317v3svs4gc4rninhfw6wj55gamhxbflzykn2x7kxgc",
|
||||
"depends": ["BiocFileCache", "BiocParallel", "BiocSingular", "DirichletReg", "Matrix", "RCurl", "Rcpp", "RcppArmadillo", "RcppDist", "RcppProgress", "S4Vectors", "SingleCellExperiment", "SummarizedExperiment", "arrow", "assertthat", "coda", "dplyr", "ggplot2", "magrittr", "mclust", "microbenchmark", "purrr", "rhdf5", "rjson", "rlang", "scales", "scater", "scran", "tibble", "tidyr", "xgboost"]
|
||||
},
|
||||
"BeadDataPackR": {
|
||||
@@ -559,7 +559,7 @@
|
||||
"name": "BiGGR",
|
||||
"version": "1.44.0",
|
||||
"sha256": "1awdwwg54cfnsn8kp0lw6a7c3mgix024ry7mxn9vb5xq4hp1gflb",
|
||||
"depends": ["LIM", "hyperdraw", "hypergraph", "limSolve", "rsbml", "stringr"]
|
||||
"depends": ["hyperdraw", "hypergraph", "limSolve", "rsbml", "stringr"]
|
||||
},
|
||||
"BiRewire": {
|
||||
"name": "BiRewire",
|
||||
@@ -689,8 +689,8 @@
|
||||
},
|
||||
"BiocHubsShiny": {
|
||||
"name": "BiocHubsShiny",
|
||||
"version": "1.8.0",
|
||||
"sha256": "0vwmq3vci10l7ypih3mixns57c0nplnqw95blsmbnjv095nqlpqi",
|
||||
"version": "1.8.1",
|
||||
"sha256": "12ihq8c0byrf6xiqbbmlzv79sq4xy7sjw06v3apn08gvypl0ifys",
|
||||
"depends": ["AnnotationHub", "DT", "ExperimentHub", "S4Vectors", "htmlwidgets", "rclipboard", "shiny", "shinyAce", "shinyjs", "shinythemes", "shinytoastr"]
|
||||
},
|
||||
"BiocIO": {
|
||||
@@ -707,8 +707,8 @@
|
||||
},
|
||||
"BiocParallel": {
|
||||
"name": "BiocParallel",
|
||||
"version": "1.42.0",
|
||||
"sha256": "0f9jvx1z1qxa3z17x1a3jgf8rfcslqqk24absw9iw9hfs3b84z5d",
|
||||
"version": "1.42.1",
|
||||
"sha256": "0dandzqfalf3d1w99yajiahrg4c1xjr8gmw11bhaacr6rvgbbdxg",
|
||||
"depends": ["BH", "codetools", "cpp11", "futile_logger", "snow"]
|
||||
},
|
||||
"BiocPkgTools": {
|
||||
@@ -803,9 +803,9 @@
|
||||
},
|
||||
"BulkSignalR": {
|
||||
"name": "BulkSignalR",
|
||||
"version": "1.0.0",
|
||||
"sha256": "10fr2p5vpzvbydydvjskrymij6s8g1lwp2g0yvvlvzhpjabdkmn6",
|
||||
"depends": ["BiocFileCache", "ComplexHeatmap", "DBI", "RANN", "RSQLite", "Rtsne", "SpatialExperiment", "SummarizedExperiment", "circlize", "cli", "curl", "doParallel", "dplyr", "foreach", "ggalluvial", "ggplot2", "ggrepel", "glmnet", "gridExtra", "httr", "igraph", "jsonlite", "matrixStats", "multtest", "orthogene", "rlang", "scales", "stabledist"]
|
||||
"version": "1.0.2",
|
||||
"sha256": "0dhnx48ff0kspy6dbi6cpr5wc8pwx23r3bbai6pjrfcmh54qnpz0",
|
||||
"depends": ["BiocFileCache", "ComplexHeatmap", "DBI", "RANN", "RCurl", "RSQLite", "Rtsne", "SpatialExperiment", "SummarizedExperiment", "circlize", "cli", "curl", "doParallel", "dplyr", "foreach", "ggalluvial", "ggplot2", "ggrepel", "glmnet", "gridExtra", "httr", "igraph", "jsonlite", "matrixStats", "multtest", "orthogene", "rlang", "scales", "stabledist"]
|
||||
},
|
||||
"BumpyMatrix": {
|
||||
"name": "BumpyMatrix",
|
||||
@@ -1025,8 +1025,8 @@
|
||||
},
|
||||
"CNVfilteR": {
|
||||
"name": "CNVfilteR",
|
||||
"version": "1.21.0",
|
||||
"sha256": "1jcdqcz83q3c5c78qm2jf7kgm7hrrjfb45byryfp5jazv7rkfkz9",
|
||||
"version": "1.22.0",
|
||||
"sha256": "1bfv1mrxa4jvzg6q8circwvdlllsc8pg5a9lq69p3l0wid10c8d5",
|
||||
"depends": ["Biostrings", "CopyNumberPlots", "GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "SummarizedExperiment", "VariantAnnotation", "assertthat", "karyoploteR", "pracma", "regioneR"]
|
||||
},
|
||||
"CNViz": {
|
||||
@@ -1079,9 +1079,9 @@
|
||||
},
|
||||
"COTAN": {
|
||||
"name": "COTAN",
|
||||
"version": "2.8.1",
|
||||
"sha256": "1alb8kaca7lq6h5iia09933ccl6px4fdjl0m71spgfvrg1a16ab7",
|
||||
"depends": ["BiocSingular", "ComplexHeatmap", "Matrix", "RColorBrewer", "Rfast", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "assertthat", "circlize", "dendextend", "dplyr", "ggplot2", "ggrepel", "ggthemes", "parallelDist", "parallelly", "plyr", "rlang", "scales", "stringr", "tibble", "tidyr", "umap", "withr", "zeallot"]
|
||||
"version": "2.8.2",
|
||||
"sha256": "0jp7npxiarr1q2ad8v49dndlqj0yswl5x3qrdn5vx39qflnqm1hn",
|
||||
"depends": ["BiocSingular", "ComplexHeatmap", "Matrix", "RColorBrewer", "Rfast", "S4Vectors", "Seurat", "SingleCellExperiment", "SummarizedExperiment", "assertthat", "circlize", "dendextend", "dplyr", "gghalves", "ggplot2", "ggrepel", "ggthemes", "parallelDist", "parallelly", "proxy", "rlang", "scales", "stringr", "tibble", "tidyr", "withr", "zeallot"]
|
||||
},
|
||||
"CPSM": {
|
||||
"name": "CPSM",
|
||||
@@ -1355,8 +1355,8 @@
|
||||
},
|
||||
"ClassifyR": {
|
||||
"name": "ClassifyR",
|
||||
"version": "3.12.0",
|
||||
"sha256": "1v3df03k0wpq38mvzj77mv8pprsnrg5750h8prfyy1rhdpkg33f1",
|
||||
"version": "3.12.2",
|
||||
"sha256": "19mw8s260f794qyfhpwzha3bp7bmc00rx2p04j4qjv77s03mcsv0",
|
||||
"depends": ["BiocParallel", "MultiAssayExperiment", "S4Vectors", "broom", "dcanr", "dplyr", "genefilter", "generics", "ggplot2", "ggpubr", "ggupset", "ranger", "reshape2", "rlang", "survival", "tidyr"]
|
||||
},
|
||||
"CleanUpRNAseq": {
|
||||
@@ -1445,8 +1445,8 @@
|
||||
},
|
||||
"CompoundDb": {
|
||||
"name": "CompoundDb",
|
||||
"version": "1.12.0",
|
||||
"sha256": "0r14ni8qqymw83dchz9xhp2hy8bmrz0n9xlsmwlgqpsrjpv1khjw",
|
||||
"version": "1.12.1",
|
||||
"sha256": "1n4ir5hr4clzj6qwxa9aa95msly2hdhcymnjyly81hw9vjbrv461",
|
||||
"depends": ["AnnotationFilter", "Biobase", "BiocGenerics", "BiocParallel", "ChemmineR", "DBI", "IRanges", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "RSQLite", "S4Vectors", "Spectra", "dbplyr", "dplyr", "jsonlite", "stringi", "tibble", "xml2"]
|
||||
},
|
||||
"ConsensusClusterPlus": {
|
||||
@@ -1457,8 +1457,8 @@
|
||||
},
|
||||
"CopyNumberPlots": {
|
||||
"name": "CopyNumberPlots",
|
||||
"version": "1.23.0",
|
||||
"sha256": "09d9njacl5f363r397xb7k4596c7zj11lywh36m2vrvg88vy057c",
|
||||
"version": "1.24.0",
|
||||
"sha256": "1avcq4qjgwa9g2f3izvay5cj8vzm7gqp7ivfvmw02k9515bw7zs1",
|
||||
"depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "Rsamtools", "SummarizedExperiment", "VariantAnnotation", "cn_mops", "karyoploteR", "regioneR", "rhdf5"]
|
||||
},
|
||||
"CoreGx": {
|
||||
@@ -2183,9 +2183,9 @@
|
||||
},
|
||||
"FRASER": {
|
||||
"name": "FRASER",
|
||||
"version": "2.4.1",
|
||||
"sha256": "1x5lgjbxcr1vq22i29y6lczl3dmdpa5qqlygk7rnbvbv09199srh",
|
||||
"depends": ["AnnotationDbi", "BBmisc", "BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "HDF5Array", "IRanges", "OUTRIDER", "PRROC", "RColorBrewer", "R_utils", "Rcpp", "RcppArmadillo", "Rsamtools", "Rsubread", "S4Vectors", "SummarizedExperiment", "VGAM", "biomaRt", "cowplot", "data_table", "extraDistr", "generics", "ggplot2", "ggrepel", "matrixStats", "pcaMethods", "pheatmap", "plotly", "rhdf5", "tibble"]
|
||||
"version": "2.4.3",
|
||||
"sha256": "0w7bgfmr72whwnh5nv3bcrk8b4316vds2sgf50qwpcb1v03n066n",
|
||||
"depends": ["AnnotationDbi", "BBmisc", "BSgenome", "Biobase", "BiocGenerics", "BiocParallel", "DelayedArray", "DelayedMatrixStats", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "HDF5Array", "IRanges", "OUTRIDER", "PRROC", "RColorBrewer", "RMTstat", "R_utils", "Rcpp", "RcppArmadillo", "Rsamtools", "Rsubread", "S4Vectors", "SummarizedExperiment", "VGAM", "biomaRt", "cowplot", "data_table", "extraDistr", "generics", "ggplot2", "ggrepel", "matrixStats", "pcaMethods", "pheatmap", "plotly", "pracma", "rhdf5", "tibble"]
|
||||
},
|
||||
"FRGEpistasis": {
|
||||
"name": "FRGEpistasis",
|
||||
@@ -2645,8 +2645,8 @@
|
||||
},
|
||||
"GenomicDataCommons": {
|
||||
"name": "GenomicDataCommons",
|
||||
"version": "1.32.0",
|
||||
"sha256": "07mpgsyi9gdb2jhkrdsxv09l1sncv214avpp68isdddk1mipk1w4",
|
||||
"version": "1.32.1",
|
||||
"sha256": "186z5mph396yj7wv0a5whcxdw3p9mqsyhl7r1wqdcdgvvfx72mys",
|
||||
"depends": ["GenomicRanges", "IRanges", "dplyr", "httr", "jsonlite", "rappdirs", "readr", "rlang", "tibble", "tidyr", "xml2"]
|
||||
},
|
||||
"GenomicDistributions": {
|
||||
@@ -2861,8 +2861,8 @@
|
||||
},
|
||||
"HPAanalyze": {
|
||||
"name": "HPAanalyze",
|
||||
"version": "1.26.0",
|
||||
"sha256": "1jr0q37q3jrz7cii033g0fh0jm8b4r5mxys9s13gb528aw6n5zg5",
|
||||
"version": "1.26.1",
|
||||
"sha256": "0lsrk41g8hfpk4jrm6wyl41wlk5pkiy5vr5gcn3zdqn7zg133v28",
|
||||
"depends": ["dplyr", "ggplot2", "gridExtra", "openxlsx", "tibble", "xml2"]
|
||||
},
|
||||
"HPiP": {
|
||||
@@ -2999,8 +2999,8 @@
|
||||
},
|
||||
"HilbertVisGUI": {
|
||||
"name": "HilbertVisGUI",
|
||||
"version": "1.65.0",
|
||||
"sha256": "0sfc3k9mgpgn262cm6dv6c48dd1yvr6k7dm3skdmbqagnnaqll16",
|
||||
"version": "1.66.1",
|
||||
"sha256": "0pavdk7szz82vzplw5pk4zch6sq89s6xvzy2q6aq8i1mf6bb3f4i",
|
||||
"depends": ["HilbertVis"]
|
||||
},
|
||||
"HoloFoodR": {
|
||||
@@ -3215,8 +3215,8 @@
|
||||
},
|
||||
"IsoBayes": {
|
||||
"name": "IsoBayes",
|
||||
"version": "1.6.0",
|
||||
"sha256": "1v4cjxwmq0qn7fa6wgzm7hizmk1cmd26wivdmyqshqlk31khbbk7",
|
||||
"version": "1.6.1",
|
||||
"sha256": "18z7jqz342hkxma3l6wmxjl0wqzg5s3c5602slqdb0asa7xf372f",
|
||||
"depends": ["HDInterval", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "doParallel", "doRNG", "foreach", "ggplot2", "glue", "iterators"]
|
||||
},
|
||||
"IsoCorrectoR": {
|
||||
@@ -3317,8 +3317,8 @@
|
||||
},
|
||||
"LRBaseDbi": {
|
||||
"name": "LRBaseDbi",
|
||||
"version": "2.17.0",
|
||||
"sha256": "0lip3bfij0gzqmsnvzvw6nnpw7jv5qlvvvnm58wf4q7nxywabq7w",
|
||||
"version": "2.18.1",
|
||||
"sha256": "1wpa7vw9in3whya5b6p6pd3ninrg405wymh8lfrz15djc73cfg7a",
|
||||
"depends": ["AnnotationDbi", "Biobase", "DBI", "RSQLite"]
|
||||
},
|
||||
"LRcell": {
|
||||
@@ -3623,8 +3623,8 @@
|
||||
},
|
||||
"MOSClip": {
|
||||
"name": "MOSClip",
|
||||
"version": "1.2.1",
|
||||
"sha256": "0cf4anlxsqvwf7s0ljvs19ai63rhf08nanpy824p9zmi49q53v78",
|
||||
"version": "1.2.2",
|
||||
"sha256": "1m69aywsksz05jbbvbvr2y5q12khydy9i0izcxl04gnf3790kgdf",
|
||||
"depends": ["AnnotationDbi", "ComplexHeatmap", "FactoMineR", "Matrix", "MultiAssayExperiment", "NbClust", "RColorBrewer", "S4Vectors", "SuperExactTest", "checkmate", "circlize", "corpcor", "coxrobust", "elasticnet", "gRbase", "ggplot2", "ggplotify", "graph", "graphite", "gridExtra", "igraph", "org_Hs_eg_db", "pheatmap", "qpgraph", "reshape", "survival", "survminer"]
|
||||
},
|
||||
"MOSim": {
|
||||
@@ -3707,8 +3707,8 @@
|
||||
},
|
||||
"MSstatsLiP": {
|
||||
"name": "MSstatsLiP",
|
||||
"version": "1.13.0",
|
||||
"sha256": "1b4j52mqkkk8mqjxkyrjp8qw9vw1qli4xgcmrizyrjhkzchl520r",
|
||||
"version": "1.14.1",
|
||||
"sha256": "1dkiywwj8nj9hadjbhbgavkq4xczbvb9s3pwl01d4mig584j7cqc",
|
||||
"depends": ["Biostrings", "MSstats", "MSstatsConvert", "MSstatsPTM", "Rcpp", "checkmate", "data_table", "dplyr", "factoextra", "ggplot2", "ggpubr", "gridExtra", "purrr", "scales", "stringr", "tibble", "tidyr", "tidyverse"]
|
||||
},
|
||||
"MSstatsPTM": {
|
||||
@@ -3887,9 +3887,9 @@
|
||||
},
|
||||
"MetaboDynamics": {
|
||||
"name": "MetaboDynamics",
|
||||
"version": "1.0.0",
|
||||
"sha256": "1llxv4295y78w6kwylm5vp6f0cbkvi2mzhzqm8z4lw1ad18ffyg0",
|
||||
"depends": ["BH", "KEGGREST", "Rcpp", "RcppEigen", "RcppParallel", "S4Vectors", "StanHeaders", "SummarizedExperiment", "dendextend", "dplyr", "dynamicTreeCut", "ggplot2", "rstan", "rstantools", "stringr", "tidyr"]
|
||||
"version": "1.0.2",
|
||||
"sha256": "1kaasmn9qx8gd6kyw691a4v6ixznpds37j10694y3dq8rh7xa65y",
|
||||
"depends": ["BH", "KEGGREST", "Rcpp", "RcppEigen", "RcppParallel", "S4Vectors", "StanHeaders", "SummarizedExperiment", "dendextend", "dplyr", "dynamicTreeCut", "ggplot2", "rlang", "rstan", "rstantools", "stringr", "tidyr"]
|
||||
},
|
||||
"MetaboSignal": {
|
||||
"name": "MetaboSignal",
|
||||
@@ -4085,8 +4085,8 @@
|
||||
},
|
||||
"MsExperiment": {
|
||||
"name": "MsExperiment",
|
||||
"version": "1.10.0",
|
||||
"sha256": "0wwwm4b1yp1d8ppzyricqa3859macffi8ncddmfaipiziglcc7l4",
|
||||
"version": "1.10.1",
|
||||
"sha256": "18ig97c7clzsm0nj38gkl722130mkrb4k80hwjazyy8nx3civir0",
|
||||
"depends": ["BiocGenerics", "DBI", "IRanges", "ProtGenerics", "QFeatures", "S4Vectors", "Spectra", "SummarizedExperiment"]
|
||||
},
|
||||
"MsFeatures": {
|
||||
@@ -4267,7 +4267,7 @@
|
||||
"name": "NormqPCR",
|
||||
"version": "1.54.0",
|
||||
"sha256": "0dg0idsx2v7nj7jg44adg2vw06405b1c4f288sdkpin6azak0i67",
|
||||
"depends": ["Biobase", "RColorBrewer", "ReadqPCR"]
|
||||
"depends": ["Biobase", "RColorBrewer", "ReadqPCR", "qpcR"]
|
||||
},
|
||||
"NuPoP": {
|
||||
"name": "NuPoP",
|
||||
@@ -4343,9 +4343,9 @@
|
||||
},
|
||||
"OUTRIDER": {
|
||||
"name": "OUTRIDER",
|
||||
"version": "1.26.1",
|
||||
"sha256": "15p5rn3v4571q2b5vr95l7rab1phzx61rwn26mfr1s1nh2zvcaly",
|
||||
"depends": ["BBmisc", "BiocGenerics", "BiocParallel", "DESeq2", "GenomicFeatures", "GenomicRanges", "IRanges", "PRROC", "RColorBrewer", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "generics", "ggplot2", "ggrepel", "heatmaply", "matrixStats", "pcaMethods", "pheatmap", "plotly", "plyr", "reshape2", "scales", "txdbmaker"]
|
||||
"version": "1.26.2",
|
||||
"sha256": "1pnkqc85myvvxam6m8x94iixyz4smh5kps66xzqsmpgsh2v6r999",
|
||||
"depends": ["BBmisc", "BiocGenerics", "BiocParallel", "DESeq2", "GenomicFeatures", "GenomicRanges", "IRanges", "PRROC", "RColorBrewer", "RMTstat", "Rcpp", "RcppArmadillo", "S4Vectors", "SummarizedExperiment", "data_table", "generics", "ggplot2", "ggrepel", "heatmaply", "matrixStats", "pcaMethods", "pheatmap", "plotly", "plyr", "pracma", "reshape2", "scales", "txdbmaker"]
|
||||
},
|
||||
"OVESEG": {
|
||||
"name": "OVESEG",
|
||||
@@ -4559,8 +4559,8 @@
|
||||
},
|
||||
"PRONE": {
|
||||
"name": "PRONE",
|
||||
"version": "1.2.0",
|
||||
"sha256": "1zdp7s64nvs5knhk1f6kmvvsdga8k79fgj24bdr194zizz1fplvq",
|
||||
"version": "1.2.1",
|
||||
"sha256": "00hmcdf5v3n4asynakd1zdpgda6bf8pia6kvccbb7y1dpbvhgks1",
|
||||
"depends": ["Biobase", "ComplexHeatmap", "ComplexUpset", "DEqMS", "MASS", "MSnbase", "NormalyzerDE", "POMA", "RColorBrewer", "ROTS", "S4Vectors", "SummarizedExperiment", "UpSetR", "circlize", "data_table", "dendsort", "dplyr", "edgeR", "ggplot2", "ggtext", "gprofiler2", "gtools", "limma", "magrittr", "matrixStats", "plotROC", "preprocessCore", "purrr", "reshape2", "scales", "stringr", "tibble", "tidyr", "vegan", "vsn"]
|
||||
},
|
||||
"PROPER": {
|
||||
@@ -4673,9 +4673,9 @@
|
||||
},
|
||||
"PhyloProfile": {
|
||||
"name": "PhyloProfile",
|
||||
"version": "2.0.1",
|
||||
"sha256": "167qajlbycq3piabhcyj6srfrzsawxip0pndjqnka1nnsm9wybqd",
|
||||
"depends": ["BiocStyle", "Biostrings", "DT", "ExperimentHub", "RColorBrewer", "RCurl", "Rfast", "ape", "bioDist", "colourpicker", "data_table", "dplyr", "energy", "extrafont", "fastcluster", "ggplot2", "gridExtra", "pbapply", "plotly", "scattermore", "shiny", "shinyBS", "shinyFiles", "shinycssloaders", "shinyjs", "stringr", "svglite", "tsne", "umap", "xml2", "yaml", "zoo"]
|
||||
"version": "2.0.4",
|
||||
"sha256": "038im33ij200mnprq3d46q65ymjqwaxk9jspjn494156qaf2w5zz",
|
||||
"depends": ["BiocStyle", "Biostrings", "DT", "ExperimentHub", "RColorBrewer", "RCurl", "Rfast", "ape", "bioDist", "colourpicker", "data_table", "dplyr", "energy", "extrafont", "fastcluster", "ggplot2", "gridExtra", "htmlwidgets", "pbapply", "plotly", "scattermore", "shiny", "shinyBS", "shinyFiles", "shinycssloaders", "shinyjs", "stringr", "svglite", "tsne", "umap", "xml2", "yaml", "zoo"]
|
||||
},
|
||||
"Pigengene": {
|
||||
"name": "Pigengene",
|
||||
@@ -5315,8 +5315,8 @@
|
||||
},
|
||||
"ReducedExperiment": {
|
||||
"name": "ReducedExperiment",
|
||||
"version": "0.99.6",
|
||||
"sha256": "1740r20m83407i79pbpqrqwwy0pc7vwgs9jdhgaw2r1aqq959wf4",
|
||||
"version": "1.0.2",
|
||||
"sha256": "0mj7gv60scgb860parqzfp4z1yx7mdjfgym54li16rva89d4m793",
|
||||
"depends": ["BiocGenerics", "BiocParallel", "RColorBrewer", "S4Vectors", "SummarizedExperiment", "WGCNA", "biomaRt", "car", "clusterProfiler", "ggplot2", "ica", "lme4", "lmerTest", "moments", "msigdbr", "patchwork", "pheatmap"]
|
||||
},
|
||||
"RegEnrich": {
|
||||
@@ -5489,8 +5489,8 @@
|
||||
},
|
||||
"S4Arrays": {
|
||||
"name": "S4Arrays",
|
||||
"version": "1.8.0",
|
||||
"sha256": "17xkmb5vvzmrappfx0ddx0bkdqfxiw2j7nhkwywn442ak46cjs3l",
|
||||
"version": "1.8.1",
|
||||
"sha256": "03y7yfym5xy0jg0c0ccmv3m1cbi4f96k3ny5p618xh309h1sizgi",
|
||||
"depends": ["BiocGenerics", "IRanges", "Matrix", "S4Vectors", "abind", "crayon"]
|
||||
},
|
||||
"S4Vectors": {
|
||||
@@ -5735,9 +5735,9 @@
|
||||
},
|
||||
"SPOTlight": {
|
||||
"name": "SPOTlight",
|
||||
"version": "1.12.0",
|
||||
"sha256": "15qlf9599zy3p4nhhc0dcnix9b89qr7yvpaqyi2xldsriwph3vwb",
|
||||
"depends": ["Matrix", "NMF", "SingleCellExperiment", "ggplot2", "matrixStats", "nnls", "sparseMatrixStats"]
|
||||
"version": "1.12.1",
|
||||
"sha256": "1kwx2nx6mh8sw6gj5m5w4i5cn056jxb4sf08jqnq9f0706arzrbp",
|
||||
"depends": ["Matrix", "Rcpp", "RcppEigen", "SingleCellExperiment", "ggplot2", "sparseMatrixStats"]
|
||||
},
|
||||
"SPsimSeq": {
|
||||
"name": "SPsimSeq",
|
||||
@@ -6023,8 +6023,8 @@
|
||||
},
|
||||
"Spectra": {
|
||||
"name": "Spectra",
|
||||
"version": "1.18.1",
|
||||
"sha256": "1w9aimvgwwc0m5yqawb8yvi9i2isdq33f8j41whrm8nzs86k8msh",
|
||||
"version": "1.18.2",
|
||||
"sha256": "0j0d58ypqsrrd2k8zw5mhdhndib40y4sdblj6dgffvy06069wd3r",
|
||||
"depends": ["BiocGenerics", "BiocParallel", "IRanges", "MetaboCoreUtils", "MsCoreUtils", "ProtGenerics", "S4Vectors", "fs"]
|
||||
},
|
||||
"SpectraQL": {
|
||||
@@ -6125,8 +6125,8 @@
|
||||
},
|
||||
"SurfR": {
|
||||
"name": "SurfR",
|
||||
"version": "1.4.0",
|
||||
"sha256": "0nmx9d5cp91zqglgddsdzcc8cdhnhz4wpaw5z5v7x652zc5a6hmg",
|
||||
"version": "1.4.1",
|
||||
"sha256": "04yh8ah8198bkp166vsqvi5hcsqkdids39pah6k15n4j22avc2g4",
|
||||
"depends": ["BiocFileCache", "DESeq2", "SPsimSeq", "SummarizedExperiment", "TCGAbiolinks", "assertr", "biomaRt", "curl", "dplyr", "edgeR", "ggplot2", "ggrepel", "gridExtra", "httr", "knitr", "magrittr", "metaRNASeq", "openxlsx", "rhdf5", "rjson", "scales", "stringr", "tidyr", "venn"]
|
||||
},
|
||||
"SwathXtend": {
|
||||
@@ -6803,8 +6803,8 @@
|
||||
},
|
||||
"alabaster_bumpy": {
|
||||
"name": "alabaster.bumpy",
|
||||
"version": "1.8.0",
|
||||
"sha256": "1bv12pwwjri951r93vd2w1mrhhjk45rmz06zdvjw6dkyx76sim6w",
|
||||
"version": "1.8.1",
|
||||
"sha256": "1axx1pz6ba7lb7n81rvykd7wyiz5ljbdnflmgr6vsr9l9m0sg3vj",
|
||||
"depends": ["BiocGenerics", "BumpyMatrix", "IRanges", "Matrix", "S4Vectors", "alabaster_base", "rhdf5"]
|
||||
},
|
||||
"alabaster_files": {
|
||||
@@ -7007,8 +7007,8 @@
|
||||
},
|
||||
"atena": {
|
||||
"name": "atena",
|
||||
"version": "1.14.0",
|
||||
"sha256": "013bfmsy4dkb7zl31vb72pz9kmlkcghrnpkrdrzkrxcf1mgyzad4",
|
||||
"version": "1.14.1",
|
||||
"sha256": "149b2hx8bvgmy9qdg5cm5icx8xi2pj0ysfaxisvrh1500rwh6kf8",
|
||||
"depends": ["AnnotationHub", "BiocGenerics", "BiocParallel", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicRanges", "IRanges", "Matrix", "MatrixGenerics", "Rsamtools", "S4Vectors", "SQUAREM", "SummarizedExperiment", "cli", "matrixStats", "sparseMatrixStats"]
|
||||
},
|
||||
"attract": {
|
||||
@@ -7373,8 +7373,8 @@
|
||||
},
|
||||
"broadSeq": {
|
||||
"name": "broadSeq",
|
||||
"version": "1.2.0",
|
||||
"sha256": "1s2jd5b0gyb692zdgn4vffvi3s9kjs8b1627wmhrdzf83xq4gf1g",
|
||||
"version": "1.2.1",
|
||||
"sha256": "11h5qshrarpzz9v4pzpzmrhcfwg2hfq2gfp4hxsxfhbi8w4j9grp",
|
||||
"depends": ["BiocStyle", "DELocal", "DESeq2", "EBSeq", "NOISeq", "SummarizedExperiment", "clusterProfiler", "dplyr", "edgeR", "forcats", "genefilter", "ggplot2", "ggplotify", "ggpubr", "pheatmap", "plyr", "purrr", "sechm", "stringr"]
|
||||
},
|
||||
"bsseq": {
|
||||
@@ -7385,8 +7385,8 @@
|
||||
},
|
||||
"bugsigdbr": {
|
||||
"name": "bugsigdbr",
|
||||
"version": "1.14.1",
|
||||
"sha256": "12wijccgfv7k0rd7h2klkmbv9mxc5ixjhd3bzy7fs4xizv6ig358",
|
||||
"version": "1.14.3",
|
||||
"sha256": "0ymr4di7daf5n0jy71lbn5wlyvdpid64n80inlvgf3n6w1qf76h4",
|
||||
"depends": ["BiocFileCache", "vroom"]
|
||||
},
|
||||
"bumphunter": {
|
||||
@@ -8717,8 +8717,8 @@
|
||||
},
|
||||
"fastreeR": {
|
||||
"name": "fastreeR",
|
||||
"version": "1.12.0",
|
||||
"sha256": "1jxacmqm1n0a491rkvijfz6ki1v8ff7d16cwj3f5aykark8abqz0",
|
||||
"version": "1.12.2",
|
||||
"sha256": "15q6mkka780kfydg2j8s5kk82gkqj8qaa7py6k9k85mq08iyqq6w",
|
||||
"depends": ["R_utils", "ape", "data_table", "dynamicTreeCut", "rJava", "stringr"]
|
||||
},
|
||||
"fastseg": {
|
||||
@@ -8747,8 +8747,8 @@
|
||||
},
|
||||
"fenr": {
|
||||
"name": "fenr",
|
||||
"version": "1.6.0",
|
||||
"sha256": "09v92fibkny0v2yx5qnvn7iyhwwbx67sal484lf1z96x7ln56hq8",
|
||||
"version": "1.6.1",
|
||||
"sha256": "0drvdhi8zynnx7h77mlfkxf7sqw8hydz8ni7sz1zvs920s8x4h5h",
|
||||
"depends": ["BiocFileCache", "assertthat", "dplyr", "ggplot2", "httr2", "progress", "purrr", "readr", "rlang", "rvest", "shiny", "stringr", "tibble", "tidyr", "tidyselect"]
|
||||
},
|
||||
"ffpe": {
|
||||
@@ -9005,8 +9005,8 @@
|
||||
},
|
||||
"gDNAx": {
|
||||
"name": "gDNAx",
|
||||
"version": "1.6.0",
|
||||
"sha256": "1zvippq7i4jrp0jsjcfgq64ghvnxnp7csx284zhyb2gghqgfad6w",
|
||||
"version": "1.6.1",
|
||||
"sha256": "0cnpgrsy8xz6xr8adyynlxwzkipd88035802albvyxlmms3jhr9v",
|
||||
"depends": ["AnnotationDbi", "AnnotationHub", "BiocGenerics", "BiocParallel", "Biostrings", "GenomeInfoDb", "GenomicAlignments", "GenomicFeatures", "GenomicFiles", "GenomicRanges", "IRanges", "RColorBrewer", "Rsamtools", "S4Vectors", "SummarizedExperiment", "bitops", "cli", "matrixStats", "plotrix"]
|
||||
},
|
||||
"gDR": {
|
||||
@@ -9107,8 +9107,8 @@
|
||||
},
|
||||
"gemma_R": {
|
||||
"name": "gemma.R",
|
||||
"version": "3.4.1",
|
||||
"sha256": "1qkmy4bm8vk4nc54xal55xnjnnpb49xb4gp6474ry02sx2jdkqkk",
|
||||
"version": "3.4.4",
|
||||
"sha256": "10snazyyvy285dqm6fmr6s3znszgqqik7fiyvka85v0srz1x1g8c",
|
||||
"depends": ["Biobase", "R_utils", "S4Vectors", "SummarizedExperiment", "assertthat", "base64enc", "bit64", "data_table", "digest", "glue", "httr", "jsonlite", "kableExtra", "lubridate", "magrittr", "memoise", "rappdirs", "rlang", "stringr", "tibble", "tidyr"]
|
||||
},
|
||||
"genArise": {
|
||||
@@ -9281,8 +9281,8 @@
|
||||
},
|
||||
"ggspavis": {
|
||||
"name": "ggspavis",
|
||||
"version": "1.14.1",
|
||||
"sha256": "1d79n9wrzcrpczizmjpwx8b9a105l5mdhaz2ih1x98lj1f1zpsl9",
|
||||
"version": "1.14.3",
|
||||
"sha256": "1fi54ndrlxpmwyrxq790nad781rjzb0v2ja398af58fhyqgrqzpz",
|
||||
"depends": ["RColorBrewer", "SingleCellExperiment", "SpatialExperiment", "SummarizedExperiment", "ggplot2", "ggrepel", "ggside", "scales"]
|
||||
},
|
||||
"ggtree": {
|
||||
@@ -9797,8 +9797,8 @@
|
||||
},
|
||||
"immApex": {
|
||||
"name": "immApex",
|
||||
"version": "1.2.0",
|
||||
"sha256": "0m4g0qriq0fxp9qhz3jlb03nir8sh81b4pdix63bb3bgkyn7sncn",
|
||||
"version": "1.2.1",
|
||||
"sha256": "04ns6k3054mw1gjvvyb4rpfvpah0s9r1nn5wx7ylnx92qrrp3qpz",
|
||||
"depends": ["Rcpp", "SingleCellExperiment", "hash", "httr", "igraph", "keras3", "magrittr", "matrixStats", "reticulate", "rvest", "stringi", "stringr", "tensorflow"]
|
||||
},
|
||||
"immunoClust": {
|
||||
@@ -9911,8 +9911,8 @@
|
||||
},
|
||||
"karyoploteR": {
|
||||
"name": "karyoploteR",
|
||||
"version": "1.33.0",
|
||||
"sha256": "0qb6wr88j65v5qxibc1kz6w928388clzcldn43206fpxp0imj0fg",
|
||||
"version": "1.34.2",
|
||||
"sha256": "0n8cwyz0fv5k0m1pi4yqx2bph967029yb807jckyb90g2rldwwbp",
|
||||
"depends": ["AnnotationDbi", "GenomeInfoDb", "GenomicFeatures", "GenomicRanges", "IRanges", "Rsamtools", "S4Vectors", "VariantAnnotation", "bamsignals", "bezier", "biovizBase", "digest", "memoise", "regioneR", "rtracklayer"]
|
||||
},
|
||||
"katdetectr": {
|
||||
@@ -9995,8 +9995,8 @@
|
||||
},
|
||||
"limma": {
|
||||
"name": "limma",
|
||||
"version": "3.64.0",
|
||||
"sha256": "1c06l6g4c5p1h4nbgkvk31hhlgi8r0bjpgf4f8bgdx4ah9fncga5",
|
||||
"version": "3.64.1",
|
||||
"sha256": "0l20jfcny1mjn4wykaqxsgabsfwpidk4pxicnqflqwidhq9cxski",
|
||||
"depends": ["statmod"]
|
||||
},
|
||||
"limmaGUI": {
|
||||
@@ -10007,8 +10007,8 @@
|
||||
},
|
||||
"limpa": {
|
||||
"name": "limpa",
|
||||
"version": "1.0.2",
|
||||
"sha256": "0l2kr2r5zhyp9v30jar4cdfv2q5fvcnshi0pc8vcy0f86mjksab0",
|
||||
"version": "1.0.3",
|
||||
"sha256": "1zzv88m0mnlx0mzq6ya5haa0fw2p9grnjklmp6z9k9fa67ndlizf",
|
||||
"depends": ["data_table", "limma", "statmod"]
|
||||
},
|
||||
"limpca": {
|
||||
@@ -10499,8 +10499,8 @@
|
||||
},
|
||||
"miRcomp": {
|
||||
"name": "miRcomp",
|
||||
"version": "1.38.0",
|
||||
"sha256": "1rndl30dybmp4abpswizd1bhqy66j4fqq8gdxllr4cnajz2759yr",
|
||||
"version": "1.38.1",
|
||||
"sha256": "0haz9h44r4s7f2sbsrglicss91qchjjgp6s9z8qj50zngkm9jdk2",
|
||||
"depends": ["Biobase", "KernSmooth", "miRcompData"]
|
||||
},
|
||||
"miRspongeR": {
|
||||
@@ -10997,8 +10997,8 @@
|
||||
},
|
||||
"nondetects": {
|
||||
"name": "nondetects",
|
||||
"version": "2.37.1",
|
||||
"sha256": "0xy5hbysrssrglxzlqmrcp5dxqndj062nnmxpw466hy6khn743p4",
|
||||
"version": "2.38.1",
|
||||
"sha256": "19jzd2yinjgqawk4ay1ywwlyw5q9yhrp3pa12z1w0caprxzxddkx",
|
||||
"depends": ["Biobase", "HTqPCR", "arm", "limma", "mvtnorm"]
|
||||
},
|
||||
"normalize450K": {
|
||||
@@ -11267,8 +11267,8 @@
|
||||
},
|
||||
"parody": {
|
||||
"name": "parody",
|
||||
"version": "1.66.0",
|
||||
"sha256": "055m8f3h7gdpdxl31bwky9y3xdlazd0wx4mjyll7zbww0lkil1rj",
|
||||
"version": "1.66.1",
|
||||
"sha256": "064pr73zbx3008khmnif7frxdhgbmarbzqa82lzmvzh4a5ldr15z",
|
||||
"depends": []
|
||||
},
|
||||
"partCNV": {
|
||||
@@ -11279,8 +11279,8 @@
|
||||
},
|
||||
"pathMED": {
|
||||
"name": "pathMED",
|
||||
"version": "1.0.0",
|
||||
"sha256": "1l30vx82bi27zcyvd1cjspa09l219bxq2llz088gx8ilc222bxfj",
|
||||
"version": "1.0.2",
|
||||
"sha256": "1v36dah8pd6fxwnyp89qlpnbd5cxq86ndk9l7bwrwri6p17kgrgy",
|
||||
"depends": ["BiocParallel", "FactoMineR", "GSVA", "caret", "caretEnsemble", "decoupleR", "dplyr", "factoextra", "ggplot2", "magrittr", "matrixStats", "metrica", "pbapply", "reshape2", "singscore", "stringi"]
|
||||
},
|
||||
"pathRender": {
|
||||
@@ -11969,8 +11969,8 @@
|
||||
},
|
||||
"regioneR": {
|
||||
"name": "regioneR",
|
||||
"version": "1.39.0",
|
||||
"sha256": "0fq8rcibsmh7vicw0p567w4847mpgj5wcc4gcsphym02hzl5ppqb",
|
||||
"version": "1.40.1",
|
||||
"sha256": "1w8s1vzb2zxswizdw4gj73r7bpxpma7jh6lxkv454k4b8i85h3xc",
|
||||
"depends": ["BSgenome", "Biostrings", "GenomeInfoDb", "GenomicRanges", "IRanges", "S4Vectors", "memoise", "rtracklayer"]
|
||||
},
|
||||
"regioneReloaded": {
|
||||
@@ -12029,8 +12029,8 @@
|
||||
},
|
||||
"rhdf5": {
|
||||
"name": "rhdf5",
|
||||
"version": "2.52.0",
|
||||
"sha256": "1v243bhy2aq721fhsw3xhpqqmfax53yjvqn3783w8g1jas3q1w8z",
|
||||
"version": "2.52.1",
|
||||
"sha256": "1i5jf15blg4c36648m2m66y66hical16j05jvqsfh4b0rnmd94yr",
|
||||
"depends": ["Rhdf5lib", "rhdf5filters"]
|
||||
},
|
||||
"rhdf5client": {
|
||||
@@ -12083,8 +12083,8 @@
|
||||
},
|
||||
"rigvf": {
|
||||
"name": "rigvf",
|
||||
"version": "1.0.0",
|
||||
"sha256": "1imd47vcf3334ysna57dz2d2amgyhg179gl85mn1ry0m4aih1l42",
|
||||
"version": "1.0.2",
|
||||
"sha256": "0fijdnk3vggxnaay93ggqzl1csfkv7zjjvivhfpd62jd1k6sqx93",
|
||||
"depends": ["GenomeInfoDb", "GenomicRanges", "IRanges", "cachem", "dplyr", "httr2", "jsonlite", "memoise", "rjsoncons", "rlang", "tidyr", "whisker"]
|
||||
},
|
||||
"rmelting": {
|
||||
@@ -12395,8 +12395,8 @@
|
||||
},
|
||||
"scQTLtools": {
|
||||
"name": "scQTLtools",
|
||||
"version": "1.0.1",
|
||||
"sha256": "174lp7bb3fnydns175p8xqw11nyj33l7k1x7kk8kr136sp49czyy",
|
||||
"version": "1.0.3",
|
||||
"sha256": "0k1ps1l56a7ybk28py515c39a9b798ysh7c47zj3w6fqncc6gpl7",
|
||||
"depends": ["DESeq2", "GOSemSim", "Matrix", "SeuratObject", "SingleCellExperiment", "SummarizedExperiment", "VGAM", "biomaRt", "dplyr", "gamlss", "ggplot2", "limma", "magrittr", "patchwork", "progress", "stringr"]
|
||||
},
|
||||
"scRNAseqApp": {
|
||||
@@ -13241,8 +13241,8 @@
|
||||
},
|
||||
"systemPipeR": {
|
||||
"name": "systemPipeR",
|
||||
"version": "2.14.0",
|
||||
"sha256": "05zrcj46z3305hn6p2744w0ilsg7r2xxgm4y33pra0397ga43a13",
|
||||
"version": "2.14.2",
|
||||
"sha256": "0l3h2n1705y33n1l9cgxbf9dlx6aksk7r9h55jdb6jbz3wcwqlzq",
|
||||
"depends": ["BiocGenerics", "Biostrings", "GenomicRanges", "Rsamtools", "S4Vectors", "ShortRead", "SummarizedExperiment", "crayon", "ggplot2", "htmlwidgets", "magrittr", "stringr", "yaml"]
|
||||
},
|
||||
"systemPipeShiny": {
|
||||
@@ -13781,9 +13781,9 @@
|
||||
},
|
||||
"xCell2": {
|
||||
"name": "xCell2",
|
||||
"version": "1.0.0",
|
||||
"sha256": "1hrq387m65sf9nkv6rf8khkwmsk58jmrayn8sxdbnw44pljcw2hk",
|
||||
"depends": ["AnnotationHub", "BiocParallel", "Matrix", "Rfast", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "magrittr", "minpack_lm", "ontologyIndex", "pracma", "progress", "quadprog", "readr", "singscore", "tibble"]
|
||||
"version": "1.0.2",
|
||||
"sha256": "18nvrfl47h92cf9fx0cxglswq18fbmxgh1lzxpfvkgqrb4clvwki",
|
||||
"depends": ["AnnotationHub", "BiocParallel", "Matrix", "Rfast", "SingleCellExperiment", "SummarizedExperiment", "dplyr", "magrittr", "minpack_lm", "ontologyIndex", "pracma", "progress", "quadprog", "readr", "singscore", "tibble", "tidyselect"]
|
||||
},
|
||||
"xcms": {
|
||||
"name": "xcms",
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -967,6 +967,7 @@ let
|
||||
cargo
|
||||
rustc
|
||||
];
|
||||
gglinedensity = [ pkgs.cargo ];
|
||||
trackViewer = [ pkgs.zlib.dev ];
|
||||
themetagenomics = [ pkgs.zlib.dev ];
|
||||
Rsymphony = [ pkgs.pkg-config ];
|
||||
@@ -1084,6 +1085,7 @@ let
|
||||
apsimx = [ pkgs.which ];
|
||||
cairoDevice = [ pkgs.pkg-config ];
|
||||
chebpol = [ pkgs.pkg-config ];
|
||||
baseline = [ pkgs.lapack ];
|
||||
eds = [ pkgs.zlib.dev ];
|
||||
pgenlibr = [ pkgs.zlib.dev ];
|
||||
fftw = [ pkgs.pkg-config ];
|
||||
@@ -1567,6 +1569,7 @@ let
|
||||
"PCRA"
|
||||
"PSCBS"
|
||||
"iemisc"
|
||||
"red"
|
||||
"repmis"
|
||||
"R_cache"
|
||||
"R_filesets"
|
||||
@@ -1577,11 +1580,13 @@ let
|
||||
"SpatialDecon"
|
||||
"stepR"
|
||||
"styler"
|
||||
"tabs"
|
||||
"teal_code"
|
||||
"TreeTools"
|
||||
"TreeSearch"
|
||||
"ACNE"
|
||||
"APAlyzer"
|
||||
"BAT"
|
||||
"EstMix"
|
||||
"Patterns"
|
||||
"PECA"
|
||||
@@ -1762,6 +1767,14 @@ let
|
||||
enableParallelBuilding = false;
|
||||
});
|
||||
|
||||
orbweaver = old.orbweaver.overrideAttrs (attrs: {
|
||||
postPatch = "patchShebangs configure";
|
||||
nativeBuildInputs = attrs.nativeBuildInputs ++ [
|
||||
pkgs.cargo
|
||||
pkgs.rustc
|
||||
];
|
||||
});
|
||||
|
||||
xml2 = old.xml2.overrideAttrs (attrs: {
|
||||
preConfigure = ''
|
||||
export LIBXML_INCDIR=${pkgs.libxml2.dev}/include/libxml2
|
||||
@@ -1942,6 +1955,10 @@ let
|
||||
patchPhase = "patchShebangs configure";
|
||||
});
|
||||
|
||||
tergo = old.tergo.overrideAttrs (attrs: {
|
||||
patchPhase = "patchShebangs configure";
|
||||
});
|
||||
|
||||
luajr = old.luajr.overrideAttrs (attrs: {
|
||||
hardeningDisable = [ "format" ];
|
||||
postPatch = "patchShebangs configure";
|
||||
@@ -2719,6 +2736,7 @@ let
|
||||
preConfigure = ''
|
||||
patchShebangs configure
|
||||
patchShebangs src/library/curl/configure
|
||||
patchShebangs src/library/keyring/configure
|
||||
patchShebangs src/library/pkgdepends/configure
|
||||
patchShebangs src/library/ps/configure
|
||||
'';
|
||||
|
||||
@@ -6,16 +6,16 @@
|
||||
|
||||
buildGoModule rec {
|
||||
pname = "tflint-ruleset-google";
|
||||
version = "0.32.0";
|
||||
version = "0.33.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "terraform-linters";
|
||||
repo = pname;
|
||||
rev = "v${version}";
|
||||
hash = "sha256-d15Co7rjqZpcnazkNWVepfGqh2ngI8tieCRugmZkr70=";
|
||||
hash = "sha256-RZDxo22ynOjNbv8jc/EMimCTxQGSfp8piqgKTO8Phl4=";
|
||||
};
|
||||
|
||||
vendorHash = "sha256-qVzXOg/f9LOnCyV84rRtXi4DGs3jmbrnlviIvoUEEF4=";
|
||||
vendorHash = "sha256-EHm5MmWpqREr8fUNCkhUO7XMFdXaR1QVRPE3JibNhhM=";
|
||||
|
||||
# upstream Makefile also does a go test $(go list ./... | grep -v integration)
|
||||
preCheck = ''
|
||||
|
||||
@@ -7,13 +7,13 @@
|
||||
buildHomeAssistantComponent rec {
|
||||
owner = "xZetsubou";
|
||||
domain = "localtuya";
|
||||
version = "2025.5.1";
|
||||
version = "2025.6.0";
|
||||
|
||||
src = fetchFromGitHub {
|
||||
owner = "xZetsubou";
|
||||
repo = "hass-localtuya";
|
||||
rev = version;
|
||||
hash = "sha256-cYaMHh16dmjO8UrpBZScGoHDNqvmQ5ceAq/lP6qazxA=";
|
||||
hash = "sha256-P5qUvlpKwcbIERzDyImc79Gzmr1IHweH8SLM6QFhb5I=";
|
||||
};
|
||||
|
||||
meta = with lib; {
|
||||
|
||||
@@ -92,7 +92,9 @@ let
|
||||
"k2v::poll::test_poll_item"
|
||||
];
|
||||
|
||||
passthru.tests = nixosTests."garage_${lib.versions.major version}";
|
||||
passthru.tests =
|
||||
lib.optionalAttrs (lib.versionAtLeast version "1")
|
||||
nixosTests."garage_${lib.versions.major version}";
|
||||
|
||||
meta = {
|
||||
description = "S3-compatible object store for small self-hosted geo-distributed deployments";
|
||||
|
||||
@@ -3738,10 +3738,6 @@ with pkgs;
|
||||
libtool = if stdenv.hostPlatform.isDarwin then cctools else libtool;
|
||||
};
|
||||
|
||||
mailutils = callPackage ../tools/networking/mailutils {
|
||||
sasl = gsasl;
|
||||
};
|
||||
|
||||
man = man-db;
|
||||
|
||||
mangohud = callPackage ../tools/graphics/mangohud {
|
||||
|
||||
@@ -7905,10 +7905,10 @@ with self;
|
||||
|
||||
CryptX = buildPerlPackage {
|
||||
pname = "CryptX";
|
||||
version = "0.080";
|
||||
version = "0.087";
|
||||
src = fetchurl {
|
||||
url = "mirror://cpan/authors/id/M/MI/MIK/CryptX-0.080.tar.gz";
|
||||
hash = "sha256-tFe3khlKbJwT8G/goLXqFYllwygvOFypPh8AorM+fok=";
|
||||
url = "mirror://cpan/authors/id/M/MI/MIK/CryptX-0.087.tar.gz";
|
||||
hash = "sha256-gHDsKVFg1I83bY/xssvwvxUtqfIDOTk4LwDxP3SM030=";
|
||||
};
|
||||
meta = {
|
||||
description = "Cryptographic toolkit";
|
||||
|
||||
Reference in New Issue
Block a user