python313Packages.configargparse: fix tests
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@@ -5,6 +5,7 @@
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mock,
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pytestCheckHook,
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pyyaml,
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pythonAtLeast,
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pythonOlder,
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}:
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@@ -22,6 +23,11 @@ buildPythonPackage rec {
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hash = "sha256-m77MY0IZ1AJkd4/Y7ltApvdF9y17Lgn92WZPYTCU9tA=";
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};
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patches = [
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# https://github.com/bw2/ConfigArgParse/pull/295
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./python3.13-compat.patch
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];
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optional-dependencies = {
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yaml = [ pyyaml ];
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};
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@@ -29,7 +35,12 @@ buildPythonPackage rec {
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nativeCheckInputs = [
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pytestCheckHook
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mock
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] ++ lib.flatten (builtins.attrValues optional-dependencies);
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] ++ lib.flatten (lib.attrValues optional-dependencies);
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disabledTests = lib.optionals (pythonAtLeast "3.13") [
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# regex mismatch
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"testMutuallyExclusiveArgs"
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];
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pythonImportsCheck = [ "configargparse" ];
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@@ -0,0 +1,112 @@
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From c6a974211f1a13d492bb807ff6d07cefcc948a87 Mon Sep 17 00:00:00 2001
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From: =?UTF-8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
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Date: Fri, 12 Jul 2024 08:15:40 +0200
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Subject: [PATCH 1/2] update test expectations for Python 3.13
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Python 3.13 no longer repeats the placeholder for options with multiple
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aliases in the help message. For example, rather than:
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-c CONFIG_FILE, --config CONFIG_FILE
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it now outputs:
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-c, --config CONFIG_FILE
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Update the regular expressions to account for both possibilities.
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Fixes #294
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---
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tests/test_configargparse.py | 24 ++++++++++++------------
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1 file changed, 12 insertions(+), 12 deletions(-)
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diff --git a/tests/test_configargparse.py b/tests/test_configargparse.py
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index 288e082..e325afd 100644
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--- a/tests/test_configargparse.py
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+++ b/tests/test_configargparse.py
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@@ -271,9 +271,9 @@ def testBasicCase2(self, use_groups=False):
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' -h, --help \\s+ show this help message and exit\n'
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' --genome GENOME \\s+ Path to genome file\n'
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' -v\n'
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- ' -g MY_CFG_FILE, --my-cfg-file MY_CFG_FILE\n'
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- ' -d DBSNP, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
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- ' -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
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+ ' -g( MY_CFG_FILE)?, --my-cfg-file MY_CFG_FILE\n'
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+ ' -d( DBSNP)?, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
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+ ' -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
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7*r'(.+\s*)')
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else:
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self.assertRegex(self.format_help(),
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@@ -286,10 +286,10 @@ def testBasicCase2(self, use_groups=False):
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'g1:\n'
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' --genome GENOME \\s+ Path to genome file\n'
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' -v\n'
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- ' -g MY_CFG_FILE, --my-cfg-file MY_CFG_FILE\n\n'
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+ ' -g( MY_CFG_FILE)?, --my-cfg-file MY_CFG_FILE\n\n'
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'g2:\n'
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- ' -d DBSNP, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
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- ' -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
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+ ' -d( DBSNP)?, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
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+ ' -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
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7*r'(.+\s*)')
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self.assertParseArgsRaises("invalid choice: 'ZZZ'",
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@@ -387,9 +387,9 @@ def testMutuallyExclusiveArgs(self):
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' \\s*-f2 TYPE2_CFG_FILE\\)\\s+\\(-f FRMT \\| -b\\)\n\n'
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'%s:\n'
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' -h, --help show this help message and exit\n'
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- ' -f1 TYPE1_CFG_FILE, --type1-cfg-file TYPE1_CFG_FILE\n'
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- ' -f2 TYPE2_CFG_FILE, --type2-cfg-file TYPE2_CFG_FILE\n'
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- ' -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n'
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+ ' -f1( TYPE1_CFG_FILE)?, --type1-cfg-file TYPE1_CFG_FILE\n'
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+ ' -f2( TYPE2_CFG_FILE)?, --type2-cfg-file TYPE2_CFG_FILE\n'
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+ ' -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n'
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' -b, --bam\\s+\\[env var: BAM_FORMAT\\]\n\n'
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'group1:\n'
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' --genome GENOME Path to genome file\n'
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@@ -875,7 +875,7 @@ def testConstructor_ConfigFileArgs(self):
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'usage: .* \\[-h\\] -c CONFIG_FILE --genome GENOME\n\n'
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'%s:\n'
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' -h, --help\\s+ show this help message and exit\n'
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- ' -c CONFIG_FILE, --config CONFIG_FILE\\s+ my config file\n'
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+ ' -c( CONFIG_FILE)?, --config CONFIG_FILE\\s+ my config file\n'
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' --genome GENOME\\s+ Path to genome file\n\n'%OPTIONAL_ARGS_STRING +
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5*r'(.+\s*)')
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@@ -935,8 +935,8 @@ def test_FormatHelp(self):
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r'\[-w CONFIG_OUTPUT_PATH\]\s* --arg1\s+ARG1\s*\[--flag\]\s*'
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'%s:\\s*'
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'-h, --help \\s* show this help message and exit '
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- r'-c CONFIG_FILE, --config CONFIG_FILE\s+my config file '
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- r'-w CONFIG_OUTPUT_PATH, --write-config CONFIG_OUTPUT_PATH takes '
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+ r'-c( CONFIG_FILE)?, --config CONFIG_FILE\s+my config file '
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+ r'-w( CONFIG_OUTPUT_PATH)?, --write-config CONFIG_OUTPUT_PATH takes '
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r'the current command line args and writes them '
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r'out to a config file at the given path, then exits '
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r'--arg1 ARG1 Arg1 help text '
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From 5e9f442374bc6d9707a43df13aaff684dff6b535 Mon Sep 17 00:00:00 2001
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From: =?UTF-8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
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Date: Fri, 12 Jul 2024 08:25:30 +0200
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Subject: [PATCH 2/2] skip exit_on_error* tests to fix 3.13 test failures
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Skip `exit_on_error*` tests from `test.test_argparse` to avoid test
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failures on Python 3.13. The `exit_on_error=False` semantics
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is not supported by ConfigArgParse at the moment.
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---
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tests/test_configargparse.py | 3 ++-
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1 file changed, 2 insertions(+), 1 deletion(-)
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diff --git a/tests/test_configargparse.py b/tests/test_configargparse.py
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index e325afd..9718d86 100644
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--- a/tests/test_configargparse.py
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+++ b/tests/test_configargparse.py
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@@ -1533,7 +1533,8 @@ def testYAMLConfigFileParser_w_ArgumentParser_parsed_values(self):
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test_argparse_source_code = test_argparse_source_code.replace(
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'argparse.ArgumentParser', 'configargparse.ArgumentParser').replace(
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'TestHelpFormattingMetaclass', '_TestHelpFormattingMetaclass').replace(
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- 'test_main', '_test_main')
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+ 'test_main', '_test_main').replace(
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+ 'test_exit_on_error', '_test_exit_on_error')
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# pytest tries to collect tests from TestHelpFormattingMetaclass, and
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# test_main, and raises a warning when it finds it's not a test class
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