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Merge pull request #231598 from natsukium/truvari/disable-tests-darwin

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truvari: disable some tests on darwin
This commit is contained in:
Ryan Lahfa
2023-05-15 09:09:09 +02:00
committed by GitHub
parent cd2a1fad0b 7edb72db10
commit 308ee09f2f
1 changed files with 14 additions and 0 deletions
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pkgs/applications/science/biology/truvari/default.nix
+14
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@@ -1,5 +1,6 @@
{ lib
, fetchFromGitHub
, fetchpatch
, python3Packages
, runtimeShell
, bcftools
@@ -24,6 +25,19 @@ in python3Packages.buildPythonApplication rec {
hash = "sha256-UJNMKEV5m2jFqnWvkVAtymkcE2TjPIXp7JqRZpMSqsE=";
};
patches = [
(fetchpatch {
name = "fix-anno-trf-on-darwin.patch";
url = "https://github.com/ACEnglish/truvari/commit/f9f36305e8eaa88f951562210e3672a4d4f71265.patch";
hash = "sha256-7O9jTQDCC2b8hUBm0qJQCYMzTC9NFtn/E0dTHSfJALU=";
})
(fetchpatch {
name = "fix-anno-grm-on-darwin.patch";
url = "https://github.com/ACEnglish/truvari/commit/31416552008a506204ed4e2add55474f10392357.patch";
hash = "sha256-42u0ewZU38GCoSfff+XQFv9hEFeO3WlJufTHcl6vkN4=";
})
];
postPatch = ''
substituteInPlace setup.py \
--replace "rich==" "rich>="