Merge pull request #314941 from bcdarwin/update-python3-dicom2nifti
python312Packages.dicom2nifti: 2.4.8 -> 2.4.11
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@@ -14,33 +14,36 @@
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buildPythonPackage rec {
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pname = "dicom2nifti";
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version = "2.4.8";
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format = "setuptools";
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version = "2.4.11";
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pyproject = true;
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disabled = pythonOlder "3.6";
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# no tests in PyPI dist
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src = fetchFromGitHub {
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owner = "icometrix";
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repo = pname;
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rev = version;
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hash = "sha256-2Pspxdeu3pHwXpbjS6bQQnvdeMuITRwYarPuLlmNcv8";
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rev = "refs/tags/${version}";
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hash = "sha256-/JauQZcCQDl1ukcSE3YPbf1SyhVxDNJUlqnFwdlwYQY=";
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};
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build-system = [ setuptools ];
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propagatedBuildInputs = [
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gdcm
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nibabel
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numpy
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pydicom
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scipy
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setuptools
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];
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# python-gdcm just builds the python interface provided by the "gdcm" package, so
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# we should be able to replace "python-gdcm" with "gdcm" but this doesn't work
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# (similar to https://github.com/NixOS/nixpkgs/issues/84774)
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postPatch = ''
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substituteInPlace setup.py --replace "python-gdcm" ""
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substituteInPlace tests/test_generic.py --replace "from common" "from dicom2nifti.common"
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substituteInPlace setup.py --replace-fail "python-gdcm" ""
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substituteInPlace tests/test_generic.py --replace-fail "from common" "from dicom2nifti.common"
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substituteInPlace tests/test_ge.py --replace-fail "import convert_generic" "import dicom2nifti.convert_generic as convert_generic"
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'';
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nativeCheckInputs = [ pytestCheckHook ];
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