python312Packages.spectral-cube: disable failing tests

pkgs/development/python-modules/spectral-cube/default.nix

@@ -2,8 +2,7 @@
   lib,
   stdenv,
   buildPythonPackage,
-  pythonOlder,
-  fetchPypi,
+  fetchFromGitHub,
 
   # build-system
   setuptools-scm,
@@ -18,7 +17,7 @@
   radio-beam,
   tqdm,
 
-  # checks
+  # tests
   aplpy,
   pytest-astropy,
   pytestCheckHook,
@@ -29,10 +28,11 @@ buildPythonPackage rec {
   version = "0.6.6";
   pyproject = true;
 
-  src = fetchPypi {
-    pname = "spectral_cube";
-    inherit version;
-    hash = "sha256-bjBghr5WrfC4NH5cyiy9RUiCmJSUHBtyD61bd1i/4kM=";
+  src = fetchFromGitHub {
+    owner = "radio-astro-tools";
+    repo = "spectral-cube";
+    tag = "v${version}";
+    hash = "sha256-fBjbovBXqUfX8rG8gEM3BY5p0BLfa4n1PMbPpPJPDgQ=";
   };
 
   build-system = [ setuptools-scm ];
@@ -59,9 +59,113 @@ buildPythonPackage rec {
     cd build/lib
   '';
 
-  # On x86_darwin, this test fails with "Fatal Python error: Aborted"
-  # when sandbox = true.
+  pytestFlagsArray = [
+    # FutureWarning: Can't acquire a memory view of a Dask array. This will raise in the future
+    # https://github.com/radio-astro-tools/spectral-cube/issues/943
+    "-W"
+    "ignore::FutureWarning"
+  ];
+
+  disabledTests =
+    [
+      # AttributeError: 'DaskSpectralCube' object has no attribute 'dtype'
+      "test_key_access_valid"
+
+      # For some reason, those tests are failing with "FutureWarning: Can't acquire a memory view of a Dask array."
+      # without being caught by the `-W ignore::FutureWarning` flag above.
+      "test_1d_slice_reductions"
+      "test_1d_slice_round"
+      "test_1d_slices"
+      "test_1dcomparison_mask_1d_index"
+      "test_1dmask_indexing"
+      "test_2dcomparison_mask_1d_index"
+      "test_3d_beams_roundtrip"
+      "test_4d_beams_roundtrip"
+      "test_LDO_arithmetic"
+      "test_add"
+      "test_apply_everywhere"
+      "test_apply_everywhere_plusminus"
+      "test_apply_function_parallel_shape"
+      "test_attributes"
+      "test_basic_arrayness"
+      "test_basic_unit_conversion"
+      "test_basic_unit_conversion_beams"
+      "test_beam_jpix_checks_array"
+      "test_beam_jtok"
+      "test_beam_jtok_2D"
+      "test_beam_jtok_array"
+      "test_beam_proj_meta"
+      "test_beams_convolution"
+      "test_beams_convolution_equal"
+      "test_casa_read_basic"
+      "test_convolution"
+      "test_convolve_to_equal"
+      "test_convolve_to_jybeam_multibeams"
+      "test_convolve_to_jybeam_onebeam"
+      "test_convolve_to_with_bad_beams"
+      "test_cube_add"
+      "test_cube_stacking"
+      "test_cube_with_swapped_axes"
+      "test_div"
+      "test_filled"
+      "test_getitem"
+      "test_getitem_vrsc"
+      "test_how_withfluxunit"
+      "test_initialization_from_units"
+      "test_mask_none"
+      "test_mosaic_cube"
+      "test_mul"
+      "test_mul_cubes"
+      "test_multibeams_unit_conversions_general_1D"
+      "test_numpy_ma_tools"
+      "test_oned_slic"
+      "test_oned_slice_beams"
+      "test_padding_direction"
+      "test_pow"
+      "test_preserves_header_meta_values"
+      "test_proj_meta"
+      "test_regression_719"
+      "test_repr_1d"
+      "test_slice_wcs"
+      "test_slicing"
+      "test_spatial_smooth_g2d"
+      "test_spatial_smooth_maxfilter"
+      "test_spatial_smooth_median"
+      "test_spatial_smooth_t2d"
+      "test_spatial_world"
+      "test_spectral_interpolate"
+      "test_spectral_interpolate_reversed"
+      "test_spectral_interpolate_varying_chunksize"
+      "test_spectral_interpolate_with_fillvalue"
+      "test_spectral_interpolate_with_mask"
+      "test_spectral_slice_preserve_units"
+      "test_spectral_smooth"
+      "test_spectral_units"
+      "test_stacking"
+      "test_stacking_badvels"
+      "test_stacking_noisy"
+      "test_stacking_reversed_specaxis"
+      "test_stacking_woffset"
+      "test_stacking_wpadding"
+      "test_subtract"
+      "test_subtract_cubes"
+      "test_unit_conversions_general"
+      "test_unit_conversions_general_1D"
+      "test_unit_conversions_general_2D"
+      "test_varyres_mask"
+      "test_varyres_spectra"
+      "test_varyres_unitconversion_roundtrip"
+      "test_with_flux_unit"
+      "test_with_spectral_unit"
+    ]
+    ++ lib.optionals stdenv.hostPlatform.isDarwin [
+      # Flaky: AssertionError: assert diffvals.max()*u.B <= 1*u.MB
+      "test_reproject_3D_memory"
+    ];
+
   disabledTestPaths = lib.optionals stdenv.hostPlatform.isDarwin [
+    # On x86_darwin, this test fails with "Fatal Python error: Aborted"
+    # when sandbox = true.
     "spectral_cube/tests/test_visualization.py"
   ];