stuebinm
ff1a94e523
The nixpkgs-unstable channel's programs.sqlite was used to identify packages producing exactly one binary, and these automatically added to their package definitions wherever possible.
95 lines
1.7 KiB
Nix
95 lines
1.7 KiB
Nix
{ lib
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, buildPythonPackage
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, fetchFromGitHub
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, setuptools
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, setuptools-scm
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, numpy
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, scipy
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, pytestCheckHook
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, pytest-timeout
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, pytest-harvest
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, matplotlib
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, decorator
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, jinja2
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, pooch
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, tqdm
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, packaging
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, importlib-resources
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, lazy-loader
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, h5io
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, pymatreader
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, pythonOlder
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}:
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buildPythonPackage rec {
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pname = "mne-python";
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version = "1.6.1";
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pyproject = true;
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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owner = "mne-tools";
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repo = "mne-python";
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rev = "refs/tags/v${version}";
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hash = "sha256-U1aMqcUZ3BcwqwOYh/qfG5PhacwBVioAgNc52uaoJL0";
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};
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postPatch = ''
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substituteInPlace pyproject.toml \
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--replace "--cov-report=" "" \
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--replace "--cov-branch" ""
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'';
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nativeBuildInputs = [
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setuptools
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setuptools-scm
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];
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propagatedBuildInputs = [
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numpy
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scipy
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matplotlib
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tqdm
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pooch
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decorator
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packaging
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jinja2
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lazy-loader
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] ++ lib.optionals (pythonOlder "3.9") [
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importlib-resources
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];
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passthru.optional-dependencies = {
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hdf5 = [
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h5io
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pymatreader
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];
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};
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nativeCheckInputs = [
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pytestCheckHook
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pytest-timeout
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pytest-harvest
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] ++ lib.flatten (builtins.attrValues passthru.optional-dependencies);
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preCheck = ''
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export HOME=$(mktemp -d)
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export MNE_SKIP_TESTING_DATASET_TESTS=true
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export MNE_SKIP_NETWORK_TESTS=1
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'';
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pythonImportsCheck = [
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"mne"
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];
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meta = with lib; {
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description = "Magnetoencephelography and electroencephalography in Python";
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mainProgram = "mne";
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homepage = "https://mne.tools";
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changelog = "https://mne.tools/stable/changes/v${version}.html";
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license = licenses.bsd3;
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maintainers = with maintainers; [ bcdarwin mbalatsko ];
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};
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}
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