97 lines
2.2 KiB
Nix
97 lines
2.2 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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pythonOlder,
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setuptools,
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setuptools-scm,
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joblib,
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keras,
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numpy,
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pandas,
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scikit-learn,
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scipy,
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tensorflow,
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threadpoolctl,
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pytestCheckHook,
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python,
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}:
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buildPythonPackage rec {
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pname = "imbalanced-learn";
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version = "0.14.0";
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pyproject = true;
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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owner = "scikit-learn-contrib";
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repo = "imbalanced-learn";
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tag = version;
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hash = "sha256-1R7jHOkTO3zK9bkUvvOPQ420ofqIO7J1rqixFEbApR0=";
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};
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build-system = [
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setuptools
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setuptools-scm
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];
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dependencies = [
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joblib
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numpy
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scikit-learn
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scipy
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threadpoolctl
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];
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optional-dependencies = {
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optional = [
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keras
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pandas
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tensorflow
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];
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};
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pythonImportsCheck = [ "imblearn" ];
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nativeCheckInputs = [
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pytestCheckHook
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pandas
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];
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preCheck = ''
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export HOME=$TMPDIR
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# The GitHub source contains too many files picked up by pytest like
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# examples and documentation files which can't pass.
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cd $out/${python.sitePackages}
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'';
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disabledTestPaths = [
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# require tensorflow and keras, but we don't want to
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# add them to nativeCheckInputs just for this tests
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"imblearn/keras"
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"imblearn/tensorflow"
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# even with precheck directory change, pytest still tries to test docstrings
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"imblearn/tests/test_docstring_parameters.py"
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# Skip dependencies test - pythonImportsCheck already does this
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"imblearn/utils/tests/test_min_dependencies.py"
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];
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disabledTests = [
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# Broken upstream test https://github.com/scikit-learn-contrib/imbalanced-learn/issues/1131
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"test_estimators_compatibility_sklearn"
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"test_balanced_bagging_classifier_with_function_sampler"
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];
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meta = {
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description = "Library offering a number of re-sampling techniques commonly used in datasets showing strong between-class imbalance";
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homepage = "https://github.com/scikit-learn-contrib/imbalanced-learn";
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changelog = "https://github.com/scikit-learn-contrib/imbalanced-learn/releases/tag/${version}";
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license = lib.licenses.mit;
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maintainers = with lib.maintainers; [
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rmcgibbo
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philipwilk
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];
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};
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}
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