Gaetan Lepage
ee02d81c22
Diff: https://github.com/pymc-devs/nutpie/compare/v0.16.7...v0.16.8 Changelog: https://github.com/pymc-devs/nutpie/blob/v0.16.8/CHANGELOG.md
104 lines
1.8 KiB
Nix
104 lines
1.8 KiB
Nix
{
|
|
lib,
|
|
stdenv,
|
|
buildPythonPackage,
|
|
fetchFromGitHub,
|
|
rustPlatform,
|
|
|
|
# build-system
|
|
cargo,
|
|
rustc,
|
|
|
|
# dependencies
|
|
arro3-core,
|
|
arviz,
|
|
obstore,
|
|
pandas,
|
|
pyarrow,
|
|
xarray,
|
|
zarr,
|
|
|
|
# tests
|
|
# bridgestan, (not packaged)
|
|
equinox,
|
|
flowjax,
|
|
jax,
|
|
jaxlib,
|
|
numba,
|
|
pytest-timeout,
|
|
pymc,
|
|
pytestCheckHook,
|
|
setuptools,
|
|
writableTmpDirAsHomeHook,
|
|
}:
|
|
|
|
buildPythonPackage (finalAttrs: {
|
|
pname = "nutpie";
|
|
version = "0.16.8";
|
|
pyproject = true;
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "pymc-devs";
|
|
repo = "nutpie";
|
|
tag = "v${finalAttrs.version}";
|
|
hash = "sha256-OW638p0mUlzv9SSVwhixozFguh31fvc1FxIYsOJD1SI=";
|
|
};
|
|
|
|
cargoDeps = rustPlatform.fetchCargoVendor {
|
|
inherit (finalAttrs) pname version src;
|
|
hash = "sha256-4ENBTEBRpSDC6G0vDHx0BO8Kc4KOwnPBXAggSNBQ4tY=";
|
|
};
|
|
|
|
build-system = [
|
|
cargo
|
|
rustPlatform.bindgenHook
|
|
rustPlatform.cargoSetupHook
|
|
rustPlatform.maturinBuildHook
|
|
rustc
|
|
];
|
|
|
|
dependencies = [
|
|
arro3-core
|
|
arviz
|
|
obstore
|
|
pandas
|
|
pyarrow
|
|
xarray
|
|
zarr
|
|
];
|
|
|
|
pythonImportsCheck = [ "nutpie" ];
|
|
|
|
nativeCheckInputs = [
|
|
# bridgestan
|
|
equinox
|
|
flowjax
|
|
numba
|
|
jax
|
|
jaxlib
|
|
pymc
|
|
pytest-timeout
|
|
pytestCheckHook
|
|
setuptools
|
|
writableTmpDirAsHomeHook
|
|
];
|
|
|
|
disabledTests = lib.optionals (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64) [
|
|
# flaky (assert np.float64(0.0017554642626285276) > 0.01)
|
|
"test_normalizing_flow"
|
|
];
|
|
|
|
disabledTestPaths = [
|
|
# Require unpackaged bridgestan
|
|
"tests/test_stan.py"
|
|
];
|
|
|
|
meta = {
|
|
description = "Python wrapper for nuts-rs";
|
|
homepage = "https://github.com/pymc-devs/nutpie";
|
|
changelog = "https://github.com/pymc-devs/nutpie/blob/${finalAttrs.src.tag}/CHANGELOG.md";
|
|
license = lib.licenses.mit;
|
|
maintainers = with lib.maintainers; [ GaetanLepage ];
|
|
};
|
|
})
|