Gaetan Lepage
215 lines
4.4 KiB
Nix
215 lines
4.4 KiB
Nix
{
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lib,
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buildPythonPackage,
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pythonAtLeast,
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fetchFromGitHub,
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# build-system
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setuptools,
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setuptools-scm,
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# nativeBuildInputs
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qt6,
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# dependencies
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app-model,
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appdirs,
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cachey,
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certifi,
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dask,
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docstring-parser,
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imageio,
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jsonschema,
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magicgui,
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napari-console,
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napari-npe2,
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napari-svg,
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numpydoc,
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pandas,
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pillow,
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pint,
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psutil,
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pydantic,
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pyopengl,
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pyyaml,
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scikit-image,
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scipy,
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superqt,
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tifffile,
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toolz,
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tqdm,
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typing-extensions,
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vispy,
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wrapt,
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# tests
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hypothesis,
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pretend,
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pyautogui,
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pytest-pretty,
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pytest-qt,
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pytestCheckHook,
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writableTmpDirAsHomeHook,
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xarray,
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zarr,
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}:
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buildPythonPackage (finalAttrs: {
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pname = "napari";
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version = "0.6.6";
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pyproject = true;
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# napari uses pydantic v1 which is not compatible with python 3.14
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# ValueError: '__slots__' in __slots__ conflicts with class variable
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disabled = pythonAtLeast "3.14";
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src = fetchFromGitHub {
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owner = "napari";
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repo = "napari";
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tag = "v${finalAttrs.version}";
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hash = "sha256-F0l6GWyZ6n4HNZW7XyUk4ZBPQfrAW4DWixCaRHViDPI=";
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};
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postPatch = ''
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substituteInPlace pyproject.toml \
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--replace-fail '"--maxfail=5", ' ""
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'';
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build-system = [
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setuptools
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setuptools-scm
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];
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nativeBuildInputs = [ qt6.wrapQtAppsHook ];
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buildInputs = [
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qt6.qtbase
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];
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pythonRelaxDeps = [
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"app-model"
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"psygnal"
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"vispy"
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];
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dependencies = [
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app-model
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appdirs
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cachey
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certifi
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dask
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docstring-parser
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imageio
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jsonschema
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magicgui
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napari-console
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napari-npe2
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napari-svg
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numpydoc
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pandas
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pillow
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pint
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psutil
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pydantic
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pyopengl
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pyyaml
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scikit-image
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scipy
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superqt
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tifffile
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toolz
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tqdm
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typing-extensions
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vispy
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wrapt
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]
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++ dask.optional-dependencies.array;
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postFixup = ''
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wrapQtApp $out/bin/napari
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'';
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preCheck = ''
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rm src/napari/__init__.py
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'';
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nativeCheckInputs = [
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hypothesis
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pretend
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pyautogui
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pytest-pretty
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pytest-qt
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pytestCheckHook
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writableTmpDirAsHomeHook
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xarray
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zarr
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];
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disabledTestPaths = [
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# Require DISPLAY access
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"src/napari/_qt/"
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# AttributeError: 'Selection' object has no attribute 'replace_selection'
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"src/napari/layers/shapes/_tests/test_shapes.py"
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"src/napari/layers/shapes/_tests/test_shapes_key_bindings.py"
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"src/napari/layers/shapes/_tests/test_shapes_mouse_bindings.py"
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# Fatal Python error: Aborted
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"src/napari/_tests/test_adding_removing.py"
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"src/napari/_tests/test_advanced.py"
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"src/napari/_tests/test_cli.py"
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"src/napari/_tests/test_conftest_fixtures.py"
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"src/napari/_tests/test_function_widgets.py"
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"src/napari/_tests/test_key_bindings.py"
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"src/napari/_tests/test_layer_utils_with_qt.py"
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"src/napari/_tests/test_mouse_bindings.py"
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"src/napari/_tests/test_multiple_viewers.py"
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"src/napari/_tests/test_notebook_display.py"
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"src/napari/_tests/test_top_level_availability.py"
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"src/napari/_tests/test_with_screenshot.py"
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"src/napari/_vispy/"
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];
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enabledTestPaths = [
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"src/napari/_tests/"
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];
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disabledTests = [
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# Failed: DID NOT WARN. No warnings of type (<class 'FutureWarning'>,) were emitted.
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"test_PublicOnlyProxy"
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# NameError: name 'utils' is not defined
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"test_create_func_deprecated"
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"test_create_func_renamed"
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"test_create_func"
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# AttributeError: 'Selection' object has no attribute 'replace_selection'
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"test_add_empty_shapes_layer"
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"test_update_data_updates_layer_extent_cache"
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# Fatal Python error: Aborted
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"test_add_layer_data_to_viewer_optional"
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"test_from_layer_data_tuple_accept_deprecating_dict"
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"test_layers_populate_immediately"
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"test_magicgui_add_data"
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"test_magicgui_add_future_data"
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"test_magicgui_add_layer"
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"test_magicgui_add_layer_inheritance"
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"test_magicgui_add_threadworker"
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"test_magicgui_data_updated"
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"test_magicgui_get_data"
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"test_magicgui_get_viewer"
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"test_make_napari_viewer"
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"test_singlescreen_window_settings"
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"test_sys_info"
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"test_view"
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];
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meta = {
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description = "Fast, interactive, multi-dimensional image viewer";
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homepage = "https://github.com/napari/napari";
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changelog = "https://github.com/napari/napari/releases/tag/${finalAttrs.src.tag}";
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license = lib.licenses.bsd3;
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maintainers = with lib.maintainers; [ SomeoneSerge ];
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};
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})
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