Martin Weinelt
74 lines
1.5 KiB
Nix
74 lines
1.5 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchFromGitHub,
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ninja,
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numpy,
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packaging,
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pybind11,
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torch,
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which,
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}:
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buildPythonPackage rec {
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pname = "monai";
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version = "1.5.2";
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pyproject = true;
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src = fetchFromGitHub {
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owner = "Project-MONAI";
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repo = "MONAI";
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tag = version;
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hash = "sha256-tRHHldNQc8Rx/oXyAEMQwIYOVtzzNpwQo8V9TdWLtO8=";
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# fix source non-reproducibility due to versioneer + git-archive, as with Numba, Pytensor etc. derivations:
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postFetch = ''
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sed -i 's/git_refnames = "[^"]*"/git_refnames = " (tag: ${src.tag})"/' $out/monai/_version.py
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'';
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};
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preBuild = ''
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export MAX_JOBS=$NIX_BUILD_CORES;
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'';
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build-system = [
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ninja
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which
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];
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buildInputs = [ pybind11 ];
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dependencies = [
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numpy
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packaging
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torch
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];
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env.BUILD_MONAI = 1;
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doCheck = false; # takes too long; tries to download data
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pythonImportsCheck = [
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"monai"
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"monai.apps"
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"monai.data"
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"monai.engines"
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"monai.handlers"
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"monai.inferers"
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"monai.losses"
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"monai.metrics"
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"monai.optimizers"
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"monai.networks"
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"monai.transforms"
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"monai.utils"
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"monai.visualize"
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];
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meta = {
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description = "Pytorch framework (based on Ignite) for deep learning in medical imaging";
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homepage = "https://github.com/Project-MONAI/MONAI";
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changelog = "https://github.com/Project-MONAI/MONAI/releases/tag/${version}";
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license = lib.licenses.asl20;
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maintainers = [ lib.maintainers.bcdarwin ];
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};
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}
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