Ihar Hrachyshka
567e8dfd8e
This commit was created by a combination of scripts and tools: - an ast-grep script to prefix things in meta with `lib.`, - a modified nixf-diagnose / nixf combination to remove unused `with lib;`, and - regular nixfmt. Co-authored-by: Wolfgang Walther <walther@technowledgy.de>
72 lines
1.1 KiB
Nix
72 lines
1.1 KiB
Nix
{
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buildPythonPackage,
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lib,
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gfortran,
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fetchgit,
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cmake,
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ninja,
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networkx,
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numpy,
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pandas,
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scipy,
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tqdm,
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joblib,
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numba,
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ase,
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scikit-build,
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dscribe,
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pyyaml,
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pytestCheckHook,
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}:
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buildPythonPackage rec {
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pname = "MolBar";
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version = "1.1.3";
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src = fetchgit {
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url = "https://git.rwth-aachen.de/bannwarthlab/molbar";
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rev = "release_v${version}";
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hash = "sha256-wHvsj1/BJpfbSKEB7Fk8PkH6laN/VMKoluZo+4bprlo=";
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};
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pyproject = true;
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nativeBuildInputs = [
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gfortran
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];
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pythonRelaxDeps = [ "networkx" ];
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build-system = [
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cmake
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scikit-build
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ninja
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];
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dependencies = [
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networkx
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numpy
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pandas
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scipy
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tqdm
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joblib
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numba
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ase
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dscribe
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pyyaml
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];
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nativeCheckInputs = [ pytestCheckHook ];
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dontUseCmakeConfigure = true;
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doCheck = false; # Doesn't find the fortran libs before installation
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meta = {
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description = "Unique molecular identifiers for molecular barcoding";
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homepage = "https://git.rwth-aachen.de/bannwarthlab/molbar";
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license = lib.licenses.mit;
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maintainers = [ lib.maintainers.sheepforce ];
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};
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}
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