85 lines
2.1 KiB
Nix
85 lines
2.1 KiB
Nix
{
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lib,
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stdenv,
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buildPythonPackage,
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fetchFromGitHub,
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fetchpatch,
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glibc,
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libtiff,
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lxml,
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numpy,
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openjpeg,
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pytestCheckHook,
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pythonOlder,
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scikit-image,
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setuptools,
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replaceVars,
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}:
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buildPythonPackage rec {
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pname = "glymur";
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version = "0.13.6";
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pyproject = true;
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disabled = pythonOlder "3.10";
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src = fetchFromGitHub {
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owner = "quintusdias";
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repo = "glymur";
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tag = "v${version}";
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hash = "sha256-tIvDhlFPpDxC3CgBDT0RN9MM8ycY+J1hjcLXzx14Zhs=";
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};
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patches = [
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# Numpy 2.x compatibility, https://github.com/quintusdias/glymur/pull/675
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(fetchpatch {
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name = "numpy2-compat.patch";
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url = "https://github.com/quintusdias/glymur/commit/89b159299035ebb05776c3b90278f410ca6dba64.patch";
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hash = "sha256-C/Q5WZmW5YtN3U8fxKljfqwKHtFLfR2LQ69Tj8SuIWg=";
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})
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(replaceVars ./set-lib-paths.patch {
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openjp2_lib = "${lib.getLib openjpeg}/lib/libopenjp2${stdenv.hostPlatform.extensions.sharedLibrary}";
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tiff_lib = "${lib.getLib libtiff}/lib/libtiff${stdenv.hostPlatform.extensions.sharedLibrary}";
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})
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];
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postPatch = lib.optionalString (!stdenv.hostPlatform.isDarwin) ''
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substituteInPlace glymur/lib/tiff.py \
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--replace-fail "glymur_config('c')" "ctypes.CDLL('${lib.getLib glibc}/lib/libc.so.6')"
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'';
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__propagatedImpureHostDeps = lib.optional stdenv.hostPlatform.isDarwin "/usr/lib/libc.dylib";
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build-system = [ setuptools ];
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dependencies = [
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lxml
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numpy
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];
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nativeCheckInputs = [
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pytestCheckHook
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scikit-image
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];
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preCheck = ''
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export PATH="$out/bin:$PATH"
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'';
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disabledTestPaths = [
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# this test involves glymur's different ways of finding the openjpeg path on
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# fsh systems by reading an .rc file and such, and is obviated by the patch
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"tests/test_config.py"
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];
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pythonImportsCheck = [ "glymur" ];
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meta = {
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description = "Tools for accessing JPEG2000 files";
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homepage = "https://github.com/quintusdias/glymur";
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changelog = "https://github.com/quintusdias/glymur/blob/${src.rev}/CHANGES.txt";
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license = lib.licenses.mit;
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maintainers = with lib.maintainers; [ tomasajt ];
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};
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}
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