34 lines
785 B
Nix
34 lines
785 B
Nix
{
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lib,
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stdenv,
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fetchFromGitHub,
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}:
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stdenv.mkDerivation (finalAttrs: {
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pname = "samblaster";
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version = "0.1.26";
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src = fetchFromGitHub {
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owner = "GregoryFaust";
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repo = "samblaster";
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rev = "v.${finalAttrs.version}";
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sha256 = "0g24fq5hplnfgqkh3xqpg3lgx3wmxwnh9c7m6yw7pbi40lmgl1jv";
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};
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makeFlags = [ "CPP=${stdenv.cc.targetPrefix}c++" ];
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installPhase = ''
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mkdir -p $out/bin
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cp samblaster $out/bin
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'';
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meta = {
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description = "Tool for marking duplicates and extracting discordant/split reads from SAM/BAM files";
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mainProgram = "samblaster";
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maintainers = with lib.maintainers; [ jbedo ];
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license = lib.licenses.mit;
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homepage = "https://github.com/GregoryFaust/samblaster";
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platforms = lib.platforms.x86_64;
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};
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})
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