diff --git a/pkgs/development/python-modules/pyslim/default.nix b/pkgs/development/python-modules/pyslim/default.nix new file mode 100644 index 000000000000..fcb53da4a4f3 --- /dev/null +++ b/pkgs/development/python-modules/pyslim/default.nix @@ -0,0 +1,45 @@ +{ lib +, buildPythonPackage +, fetchPypi +, setuptools-scm +, pythonOlder +, msprime +, numpy +, tskit +}: + +buildPythonPackage rec { + pname = "pyslim"; + version = "1.0.3"; + format = "pyproject"; + disabled = pythonOlder "3.7"; + + src = fetchPypi { + inherit pname version; + hash = "sha256-BRfv5AcdRpnvk7zGeYYWweh+foFEOSZjz3pTjX8KOnA="; + }; + + nativeBuildInputs = [ + setuptools-scm + ]; + + propagatedBuildInputs = [ + msprime + tskit + numpy + ]; + + # Requires non-packaged software SLiM + doCheck = false; + + pythonImportsCheck = [ + "pyslim" + ]; + + meta = with lib; { + description = "Tools for dealing with tree sequences coming to and from SLiM"; + homepage = "https://github.com/tskit-dev/pyslim"; + license = licenses.mit; + maintainers = with maintainers; [ alxsimon ]; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index f8239ec37a78..925caade9210 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -9462,6 +9462,8 @@ self: super: with self; { pysingleton = callPackage ../development/python-modules/pysingleton { }; + pyslim = callPackage ../development/python-modules/pyslim { }; + pyslurm = callPackage ../development/python-modules/pyslurm { inherit (pkgs) slurm; };