From d9de8139077be4147ea682ae0fcf7e84e0eabf69 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?L=C3=A1szl=C3=B3=20Kupcsik?= <koopac@gmail.com>
Date: Sun, 2 Mar 2025 21:38:19 +0100
Subject: [PATCH] rPackages.methylKit: fix build

Backporting fix from devel. Can be removed with next release
---
 pkgs/development/r-modules/default.nix | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix
index 4fdf10261125..1ec237a191b8 100644
--- a/pkgs/development/r-modules/default.nix
+++ b/pkgs/development/r-modules/default.nix
@@ -1779,6 +1779,16 @@ let
       RGL_USE_NULL = "true";
     });
 
+    methylKit = old.methylKit.overrideAttrs (attrs: {
+      # resolve missing function from data.table
+      patches = [
+        (pkgs.fetchpatch {
+          url = "https://github.com/al2na/methylKit/commit/5c30347630bc064d7aefc918923f723671f35253.patch";
+          sha256 = "sha256-hwtybBmSYwVInMIEZ7i7zudJWjiRJmrD0/tU7v78pPc=";
+        })
+      ];
+    });
+
     Rrdrand = old.Rrdrand.override { platforms = lib.platforms.x86_64 ++ lib.platforms.x86; };
 
     symengine = old.symengine.overrideAttrs (_: {