From 99ef3d51e8df28b11567fefb8523e6d3452a5443 Mon Sep 17 00:00:00 2001
From: Ben Darwin <bcdarwin@gmail.com>
Date: Thu, 22 Aug 2024 10:53:58 -0400
Subject: [PATCH] itk: unvendor eigen

---
 pkgs/development/libraries/itk/generic.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/development/libraries/itk/generic.nix b/pkgs/development/libraries/itk/generic.nix
index 7ac9d6d8fbfe..808bac76e861 100644
--- a/pkgs/development/libraries/itk/generic.nix
+++ b/pkgs/development/libraries/itk/generic.nix
@@ -13,6 +13,7 @@
   castxml,
   swig,
   expat,
+  eigen,
   fftw,
   gdcm,
   hdf5-cpp,
@@ -106,9 +107,7 @@ stdenv.mkDerivation {
       "-DBUILD_SHARED_LIBS=ON"
       "-DITK_FORBID_DOWNLOADS=ON"
       "-DITK_USE_SYSTEM_LIBRARIES=ON" # finds common libraries e.g. hdf5, libpng, libtiff, zlib, but not GDCM, NIFTI, MINC, etc.
-      # note ITK_USE_SYSTEM_EIGEN, part of ITK_USE_SYSTEM_LIBRARIES,
-      # causes "...-itk-5.2.1/include/ITK-5.2/itkSymmetricEigenAnalysis.h:23:31: fatal error: Eigen/Eigenvalues: No such file or directory"
-      # when compiling c3d, but maybe an ITK 5.2/eigen version issue:
+      "-DITK_USE_SYSTEM_EIGEN=ON"
       "-DITK_USE_SYSTEM_EIGEN=OFF"
       "-DITK_USE_SYSTEM_GOOGLETEST=OFF" # ANTs build failure due to https://github.com/ANTsX/ANTs/issues/1489
       "-DITK_USE_SYSTEM_GDCM=ON"
@@ -144,6 +143,7 @@ stdenv.mkDerivation {
 
   buildInputs =
     [
+      eigen
       libX11
       libuuid
     ]