diff --git a/pkgs/development/python-modules/rioxarray/default.nix b/pkgs/development/python-modules/rioxarray/default.nix
index 908a2b7b372f..e7e761cd78eb 100644
--- a/pkgs/development/python-modules/rioxarray/default.nix
+++ b/pkgs/development/python-modules/rioxarray/default.nix
@@ -52,6 +52,11 @@ buildPythonPackage rec {
     [
       # AssertionError: assert 535727386 == 535691205
       "test_clip_geojson__no_drop"
+      # Fails with GDAL 3.11 warning
+      "test_rasterio_vrt"
+      # Fails with small numerical errors on GDAL 3.11
+      "test_rasterio_vrt_gcps"
+      "test_reproject__gcps"
     ]
     ++ lib.optionals stdenv.hostPlatform.isAarch64 [
       # numerical errors