diff --git a/pkgs/applications/virtualization/qemu/default.nix b/pkgs/applications/virtualization/qemu/default.nix
index 75945ebf8302..98542ee3aabc 100644
--- a/pkgs/applications/virtualization/qemu/default.nix
+++ b/pkgs/applications/virtualization/qemu/default.nix
@@ -170,7 +170,7 @@ stdenv.mkDerivation (finalAttrs: {
     perl
 
     # Don't change this to python3 and python3.pkgs.*, breaks cross-compilation
-    python3Packages.python
+    (python3Packages.python.withPackages (ps: with ps; [ distlib ]))
   ]
   ++ lib.optionals gtkSupport [ wrapGAppsHook3 ]
   ++ lib.optionals enableDocs [
diff --git a/pkgs/by-name/aw/awscli/package.nix b/pkgs/by-name/aw/awscli/package.nix
index 39cc67df9f87..298f46a9773c 100644
--- a/pkgs/by-name/aw/awscli/package.nix
+++ b/pkgs/by-name/aw/awscli/package.nix
@@ -14,14 +14,14 @@ let
     pname = "awscli";
     # N.B: if you change this, change botocore and boto3 to a matching version too
     # check e.g. https://github.com/aws/aws-cli/blob/1.33.21/setup.py
-    version = "1.40.31";
+    version = "1.42.4";
     pyproject = true;
 
     src = fetchFromGitHub {
       owner = "aws";
       repo = "aws-cli";
       tag = version;
-      hash = "sha256-BjQyA7uK9F/5myPXsMpD0HZK69Se3WveYMHNCzhVNKc=";
+      hash = "sha256-vkQFhSsK9MWhp+jvomkVdjxXuBOH4GnFgz/9jtPRNIs=";
     };
 
     pythonRelaxDeps = [
diff --git a/pkgs/by-name/bo/borgbackup/package.nix b/pkgs/by-name/bo/borgbackup/package.nix
index a3a49005af9f..cdeb0d332a6b 100644
--- a/pkgs/by-name/bo/borgbackup/package.nix
+++ b/pkgs/by-name/bo/borgbackup/package.nix
@@ -4,6 +4,7 @@
   acl,
   e2fsprogs,
   fetchFromGitHub,
+  fetchpatch,
   libb2,
   lz4,
   openssh,
@@ -30,6 +31,14 @@ python.pkgs.buildPythonApplication rec {
     hash = "sha256-1RRizsHY6q1ruofTkRZ4sSN4k6Hoo+sG85w2zz+7yL8=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "allow-msgpack-1.1.1.patch";
+      url = "https://github.com/borgbackup/borg/commit/f6724bfef2515ed5bf66c9a0434655c60a82aae2.patch";
+      hash = "sha256-UfLaAFKEAHvbIR5WDYJY7bz3aiffdwAXJKfzZZU+NT8=";
+    })
+  ];
+
   postPatch = ''
     # sandbox does not support setuid/setgid/sticky bits
     substituteInPlace src/borg/testsuite/archiver.py \
diff --git a/pkgs/by-name/es/esphome/package.nix b/pkgs/by-name/es/esphome/package.nix
index ef77f7baaf53..2fcd40ed1bcc 100644
--- a/pkgs/by-name/es/esphome/package.nix
+++ b/pkgs/by-name/es/esphome/package.nix
@@ -61,7 +61,8 @@ python.pkgs.buildPythonApplication rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace-fail "setuptools==80.9.0" "setuptools"
+      --replace-fail "setuptools==80.9.0" "setuptools" \
+      --replace-fail "wheel>=0.43,<0.46" "wheel"
   '';
 
   # Remove esptool and platformio from requirements
diff --git a/pkgs/by-name/li/libplacebo/package.nix b/pkgs/by-name/li/libplacebo/package.nix
index 6960879bdc8a..9ec11a30a720 100644
--- a/pkgs/by-name/li/libplacebo/package.nix
+++ b/pkgs/by-name/li/libplacebo/package.nix
@@ -2,6 +2,7 @@
   lib,
   stdenv,
   fetchFromGitLab,
+  fetchpatch,
   meson,
   ninja,
   pkg-config,
@@ -31,6 +32,14 @@ stdenv.mkDerivation rec {
     hash = "sha256-ccoEFpp6tOFdrfMyE0JNKKMAdN4Q95tP7j7vzUj+lSQ=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "python-compat.patch";
+      url = "https://code.videolan.org/videolan/libplacebo/-/commit/12509c0f1ee8c22ae163017f0a5e7b8a9d983a17.patch";
+      hash = "sha256-RrlFu0xgLB05IVrzL2EViTPuATYXraM1KZMxnZCvgrk=";
+    })
+  ];
+
   nativeBuildInputs = [
     meson
     ninja
diff --git a/pkgs/by-name/ma/maturin/package.nix b/pkgs/by-name/ma/maturin/package.nix
index f1befa6b5b71..1a5a7472b87a 100644
--- a/pkgs/by-name/ma/maturin/package.nix
+++ b/pkgs/by-name/ma/maturin/package.nix
@@ -12,16 +12,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "maturin";
-  version = "1.9.1";
+  version = "1.9.3";
 
   src = fetchFromGitHub {
     owner = "PyO3";
     repo = "maturin";
     rev = "v${version}";
-    hash = "sha256-nqi3t1rK2ZTIwFra1avnnhJSMbRI64t5/wP3dCyCY3A=";
+    hash = "sha256-VhL4nKXyONXbxriEHta0vCnWY1j82oDOLoxVigaggSc=";
   };
 
-  cargoHash = "sha256-ZszmCXvPRpt6+cTDU1GD3K81Qw4UVFMDKLOlb1R6KiE=";
+  cargoHash = "sha256-Iom4GoTBFJ9P5UQnYF5JbeQeO2Eh1MwKOwbo+PhgtQM=";
 
   buildInputs = lib.optionals stdenv.hostPlatform.isDarwin [
     libiconv
diff --git a/pkgs/by-name/pa/paperless-ngx/package.nix b/pkgs/by-name/pa/paperless-ngx/package.nix
index 6e233aaa3d11..12edfd5b1e7e 100644
--- a/pkgs/by-name/pa/paperless-ngx/package.nix
+++ b/pkgs/by-name/pa/paperless-ngx/package.nix
@@ -2,6 +2,7 @@
   lib,
   stdenv,
   fetchFromGitHub,
+  fetchPypi,
   node-gyp,
   nodejs_20,
   nixosTests,
@@ -40,6 +41,18 @@ let
     packageOverrides = final: prev: {
       django = prev.django_5_1;
 
+      fido2 = prev.fido2.overridePythonAttrs {
+        version = "1.2.0";
+
+        src = fetchPypi {
+          pname = "fido2";
+          version = "1.2.0";
+          hash = "sha256-45+VkgEi1kKD/aXlWB2VogbnBPpChGv6RmL4aqDTMzs=";
+        };
+
+        pytestFlags = [ ];
+      };
+
       # tesseract5 may be overwritten in the paperless module and we need to propagate that to make the closure reduction effective
       ocrmypdf = prev.ocrmypdf.override { tesseract = tesseract5; };
     };
@@ -170,6 +183,7 @@ python.pkgs.buildPythonApplication rec {
             tag = version;
             hash = "sha256-1HmEJ5E4Vp/CoyzUegqQXpzKUuz3dLx2EEv7dk8fq8w=";
           };
+          patches = [ ];
         }
       ))
       django-auditlog
diff --git a/pkgs/by-name/pd/pdm/package.nix b/pkgs/by-name/pd/pdm/package.nix
index 7bddb9c35873..c561562a50d8 100644
--- a/pkgs/by-name/pd/pdm/package.nix
+++ b/pkgs/by-name/pd/pdm/package.nix
@@ -28,7 +28,7 @@ let
 in
 python.pkgs.buildPythonApplication rec {
   pname = "pdm";
-  version = "2.24.2";
+  version = "2.25.5";
   pyproject = true;
 
   disabled = python.pkgs.pythonOlder "3.8";
@@ -37,7 +37,7 @@ python.pkgs.buildPythonApplication rec {
     owner = "pdm-project";
     repo = "pdm";
     tag = version;
-    hash = "sha256-z2p7guCQrKpDSYRHaGcHuwoTDsprrvJo9SH3sGBILSQ=";
+    hash = "sha256-OXwtmcwRYRL9CZwAoJz9ID9oI3zz+5MkvU0vI5NjvEE=";
   };
 
   pythonRelaxDeps = [ "hishel" ];
@@ -126,6 +126,9 @@ python.pkgs.buildPythonApplication rec {
     "test_use_python_write_file_multiple_versions"
     "test_repository_get_token_from_oidc"
     "test_repository_get_token_misconfigured_github"
+
+    # https://github.com/pdm-project/pdm/issues/3590
+    "test_install_from_lock_with_higher_version"
   ];
 
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/by-name/po/poetry/package.nix b/pkgs/by-name/po/poetry/package.nix
index b17bd307b3dd..b96a4cce5b14 100644
--- a/pkgs/by-name/po/poetry/package.nix
+++ b/pkgs/by-name/po/poetry/package.nix
@@ -2,6 +2,7 @@
   lib,
   python3,
   fetchFromGitHub,
+  fetchPypi,
 }:
 
 let
@@ -25,6 +26,16 @@ let
           hash = "sha256-CgaWlqjvBTN7GuerzmO5IiEdXxYH6pmTDj9IsNJlCBE=";
         };
       });
+
+      findpython = super.findpython.overridePythonAttrs (old: rec {
+        version = "0.6.3";
+
+        src = fetchPypi {
+          inherit (old) pname;
+          inherit version;
+          hash = "sha256-WGPqVVVtiq3Gk0gaFKxPNiSVJxnvwcVZGrsLSp6WXJQ=";
+        };
+      });
     }
     // (plugins self);
   python = python3.override (old: {
diff --git a/pkgs/by-name/pr/pretalx/package.nix b/pkgs/by-name/pr/pretalx/package.nix
index 0f684765681a..bd6aa3dec1f9 100644
--- a/pkgs/by-name/pr/pretalx/package.nix
+++ b/pkgs/by-name/pr/pretalx/package.nix
@@ -4,6 +4,7 @@
   gettext,
   python3,
   fetchFromGitHub,
+  fetchPypi,
   plugins ? [ ],
   nixosTests,
 }:
@@ -14,6 +15,15 @@ let
     packageOverrides = final: prev: {
       django = prev.django_5_1;
 
+      django-csp = prev.django-csp.overridePythonAttrs rec {
+        version = "3.8";
+        src = fetchPypi {
+          inherit version;
+          pname = "django_csp";
+          hash = "sha256-7w8an32Nporm4WnALprGYcDs8E23Dg0dhWQFEqaEccA=";
+        };
+      };
+
       django-extensions = prev.django-extensions.overridePythonAttrs {
         # Compat issues with Django 5.1
         # https://github.com/django-extensions/django-extensions/issues/1885
diff --git a/pkgs/by-name/rd/rdkafka/package.nix b/pkgs/by-name/rd/rdkafka/package.nix
index 976c1c044179..89c5701e3880 100644
--- a/pkgs/by-name/rd/rdkafka/package.nix
+++ b/pkgs/by-name/rd/rdkafka/package.nix
@@ -15,13 +15,13 @@
 
 stdenv.mkDerivation (finalAttrs: {
   pname = "rdkafka";
-  version = "2.10.1";
+  version = "2.11.0";
 
   src = fetchFromGitHub {
     owner = "confluentinc";
     repo = "librdkafka";
     tag = "v${finalAttrs.version}";
-    sha256 = "sha256-+ACn+1fjWEnUB32gUCoMpnq+6YBu+rufPT8LY920DBk=";
+    sha256 = "sha256-37lCQ+CFeTRQwL6FCl79RSGw+nRKr0DeuXob9CjiVnk=";
   };
 
   outputs = [
diff --git a/pkgs/by-name/th/thrift/package.nix b/pkgs/by-name/th/thrift/package.nix
index 574c028e463d..7b32a64faad9 100644
--- a/pkgs/by-name/th/thrift/package.nix
+++ b/pkgs/by-name/th/thrift/package.nix
@@ -33,11 +33,17 @@ stdenv.mkDerivation rec {
     cmake
     flex
     pkg-config
-    python3
-    python3.pkgs.setuptools
-  ]
-  ++ lib.optionals (!static) [
-    python3.pkgs.twisted
+    (python3.withPackages (
+      ps:
+      with ps;
+      [
+        setuptools
+        six
+      ]
+      ++ lib.optionals (!static) [
+        twisted
+      ]
+    ))
   ];
 
   buildInputs = [
diff --git a/pkgs/by-name/we/weblate/package.nix b/pkgs/by-name/we/weblate/package.nix
index b0500def65f7..36bbdc21b1ea 100644
--- a/pkgs/by-name/we/weblate/package.nix
+++ b/pkgs/by-name/we/weblate/package.nix
@@ -150,7 +150,10 @@ python.pkgs.buildPythonApplication rec {
     ++ drf-spectacular.optional-dependencies.sidecar
     ++ drf-standardized-errors.optional-dependencies.openapi;
 
-  pythonRelaxDeps = [ "certifi" ];
+  pythonRelaxDeps = [
+    "certifi"
+    "lxml"
+  ];
 
   optional-dependencies = {
     postgres = with python.pkgs; [ psycopg ];
diff --git a/pkgs/development/interpreters/python/cpython/default.nix b/pkgs/development/interpreters/python/cpython/default.nix
index ec6d55011bad..abdf0a1ceb22 100644
--- a/pkgs/development/interpreters/python/cpython/default.nix
+++ b/pkgs/development/interpreters/python/cpython/default.nix
@@ -12,17 +12,23 @@
   pkg-config,
   python-setup-hook,
 
+  # high level switches
+  withMinimalDeps ? false,
+
   # runtime dependencies
   bzip2,
-  withExpat ? true,
+  withExpat ? !withMinimalDeps,
   expat,
   libffi,
   libuuid,
+  withLibxcrypt ? !withMinimalDeps,
   libxcrypt,
-  withMpdecimal ? true,
+  withMpdecimal ? !withMinimalDeps,
   mpdecimal,
   ncurses,
+  withOpenssl ? !withMinimalDeps,
   openssl,
+  withSqlite ? !withMinimalDeps,
   sqlite,
   xz,
   zlib,
@@ -35,12 +41,12 @@
   # optional dependencies
   bluezSupport ? false,
   bluez,
-  mimetypesSupport ? true,
+  mimetypesSupport ? !withMinimalDeps,
   mailcap,
   tzdata,
-  withGdbm ? !stdenv.hostPlatform.isWindows,
+  withGdbm ? !withMinimalDeps && !stdenv.hostPlatform.isWindows,
   gdbm,
-  withReadline ? !stdenv.hostPlatform.isWindows,
+  withReadline ? !withMinimalDeps && !stdenv.hostPlatform.isWindows,
   readline,
   x11Support ? false,
   tcl,
@@ -63,13 +69,13 @@
   sourceVersion,
   hash,
   passthruFun,
-  stripConfig ? false,
-  stripIdlelib ? false,
-  stripTests ? false,
-  stripTkinter ? false,
-  rebuildBytecode ? true,
+  stripConfig ? withMinimalDeps,
+  stripIdlelib ? withMinimalDeps,
+  stripTests ? withMinimalDeps,
+  stripTkinter ? withMinimalDeps,
+  rebuildBytecode ? !withMinimalDeps,
   stripBytecode ? true,
-  includeSiteCustomize ? true,
+  includeSiteCustomize ? !withMinimalDeps,
   static ? stdenv.hostPlatform.isStatic,
   enableFramework ? false,
   noldconfigPatch ? ./. + "/${sourceVersion.major}.${sourceVersion.minor}/no-ldconfig.patch",
@@ -85,7 +91,8 @@
 
   # enabling LTO on 32bit arch causes downstream packages to fail when linking
   enableLTO ?
-    stdenv.hostPlatform.isDarwin || (stdenv.hostPlatform.is64bit && stdenv.hostPlatform.isLinux),
+    !withMinimalDeps
+    && (stdenv.hostPlatform.isDarwin || (stdenv.hostPlatform.is64bit && stdenv.hostPlatform.isLinux)),
 
   # enable asserts to ensure the build remains reproducible
   reproducibleBuild ? false,
@@ -97,7 +104,9 @@
   testers,
 
   # allow pythonMinimal to prevent accidental dependencies it doesn't want
-  allowedReferenceNames ? [ ],
+  # Having this as an option is useful to allow overriding, eg. adding things to
+  # python3Minimal
+  allowedReferenceNames ? if withMinimalDeps then [ "bashNonInteractive" ] else [ ],
 
 }@inputs:
 
@@ -140,12 +149,12 @@ let
     ;
 
   # mixes libc and libxcrypt headers and libs and causes segfaults on importing crypt
-  libxcrypt = if stdenv.hostPlatform.isFreeBSD then null else inputs.libxcrypt;
+  libxcrypt = if stdenv.hostPlatform.isFreeBSD && withMinimalDeps then null else inputs.libxcrypt;
 
   buildPackages = pkgsBuildHost;
   inherit (passthru) pythonOnBuildForHost;
 
-  tzdataSupport = tzdata != null && passthru.pythonAtLeast "3.9";
+  tzdataSupport = !withMinimalDeps && tzdata != null && passthru.pythonAtLeast "3.9";
 
   passthru =
     let
@@ -200,13 +209,15 @@ let
   nativeBuildInputs = [
     nukeReferences
   ]
-  ++ optionals (!stdenv.hostPlatform.isDarwin) [
+  ++ optionals (!stdenv.hostPlatform.isDarwin && !withMinimalDeps) [
     autoconf-archive # needed for AX_CHECK_COMPILE_FLAG
     autoreconfHook
   ]
-  ++ optionals (!stdenv.hostPlatform.isDarwin || passthru.pythonAtLeast "3.14") [
-    pkg-config
-  ]
+  ++
+    optionals ((!stdenv.hostPlatform.isDarwin || passthru.pythonAtLeast "3.14") && !withMinimalDeps)
+      [
+        pkg-config
+      ]
   ++ optionals (stdenv.hostPlatform != stdenv.buildPlatform) [
     buildPackages.stdenv.cc
     pythonOnBuildForHost
@@ -223,19 +234,22 @@ let
       ];
 
   buildInputs = lib.filter (p: p != null) (
-    [
+    optionals (!withMinimalDeps) [
       bzip2
       libffi
       libuuid
-      libxcrypt
       ncurses
-      openssl
-      sqlite
       xz
       zlib
     ]
-    ++ optionals (passthru.pythonAtLeast "3.14") [
-      zstd
+    ++ optionals withLibxcrypt [
+      libxcrypt
+    ]
+    ++ optionals withOpenssl [
+      openssl
+    ]
+    ++ optionals withSqlite [
+      sqlite
     ]
     ++ optionals withMpdecimal [
       mpdecimal
@@ -243,6 +257,9 @@ let
     ++ optionals withExpat [
       expat
     ]
+    ++ optionals (passthru.pythonAtLeast "3.14") [
+      zstd
+    ]
     ++ optionals bluezSupport [
       bluez
     ]
@@ -435,7 +452,7 @@ stdenv.mkDerivation (finalAttrs: {
   env = {
     CPPFLAGS = concatStringsSep " " (map (p: "-I${getDev p}/include") buildInputs);
     LDFLAGS = concatStringsSep " " (map (p: "-L${getLib p}/lib") buildInputs);
-    LIBS = "${optionalString (!stdenv.hostPlatform.isDarwin && libxcrypt != null) "-lcrypt"}";
+    LIBS = "${optionalString (!stdenv.hostPlatform.isDarwin && withLibxcrypt) "-lcrypt"}";
     NIX_LDFLAGS = lib.optionalString (stdenv.cc.isGNU && !stdenv.hostPlatform.isStatic) (
       {
         "glibc" = "-lgcc_s";
@@ -457,7 +474,7 @@ stdenv.mkDerivation (finalAttrs: {
   ++ optionals withMpdecimal [
     "--with-system-libmpdec"
   ]
-  ++ optionals (openssl != null) [
+  ++ optionals withOpenssl [
     "--with-openssl=${openssl.dev}"
   ]
   ++ optionals tzdataSupport [
@@ -484,10 +501,10 @@ stdenv.mkDerivation (finalAttrs: {
   ++ optionals enableDebug [
     "--with-pydebug"
   ]
-  ++ optionals (sqlite != null) [
+  ++ optionals withSqlite [
     "--enable-loadable-sqlite-extensions"
   ]
-  ++ optionals (libxcrypt != null) [
+  ++ optionals withLibxcrypt [
     "CFLAGS=-I${libxcrypt}/include"
     "LIBS=-L${libxcrypt}/lib"
   ]
@@ -592,7 +609,7 @@ stdenv.mkDerivation (finalAttrs: {
         [
           (placeholder "out")
         ]
-        ++ lib.optional (libxcrypt != null) libxcrypt
+        ++ lib.optional withLibxcrypt libxcrypt
         ++ lib.optional tzdataSupport tzdata
       );
     in
@@ -758,7 +775,7 @@ stdenv.mkDerivation (finalAttrs: {
   # Enforce that we don't have references to the OpenSSL -dev package, which we
   # explicitly specify in our configure flags above.
   disallowedReferences =
-    lib.optionals (openssl != null && !static && !enableFramework) [
+    lib.optionals (withOpenssl && !static && !enableFramework) [
       openssl.dev
     ]
     ++ lib.optionals (stdenv.hostPlatform != stdenv.buildPlatform) [
diff --git a/pkgs/development/interpreters/python/default.nix b/pkgs/development/interpreters/python/default.nix
index 322de044a111..9679b39a2890 100644
--- a/pkgs/development/interpreters/python/default.nix
+++ b/pkgs/development/interpreters/python/default.nix
@@ -105,37 +105,7 @@
           inherit passthruFun;
           pythonAttr = "python3Minimal";
           # strip down that python version as much as possible
-          openssl = null;
-          readline = null;
-          ncurses = null;
-          gdbm = null;
-          sqlite = null;
-          tzdata = null;
-          libuuid = null;
-          bzip2 = null;
-          libxcrypt = null;
-          xz = null;
-          zlib = null;
-          libffi = null;
-          stripConfig = true;
-          stripIdlelib = true;
-          stripTests = true;
-          stripTkinter = true;
-          rebuildBytecode = false;
-          stripBytecode = true;
-          includeSiteCustomize = false;
-          enableOptimizations = false;
-          enableLTO = false;
-          mimetypesSupport = false;
-          withExpat = false;
-          withMpdecimal = false;
-          /*
-            The actual 'allowedReferences' attribute is set inside the cpython derivation.
-            This is necessary in order to survive overrides of dependencies.
-          */
-          allowedReferenceNames = [
-            "bashNonInteractive"
-          ];
+          withMinimalDeps = true;
         }
         // sources.python313
       )).overrideAttrs
diff --git a/pkgs/development/python-modules/a2wsgi/default.nix b/pkgs/development/python-modules/a2wsgi/default.nix
index f281c25b3884..e38f47e6bcd8 100644
--- a/pkgs/development/python-modules/a2wsgi/default.nix
+++ b/pkgs/development/python-modules/a2wsgi/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "a2wsgi";
-  version = "1.10.8";
+  version = "1.10.10";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-/AC6sfx5L4mozhtJGyrRcXsUXYyu+3XQqFhpRu3JfLI=";
+    hash = "sha256-pbz/tSCBujnfDV6aiE/G+BnZLjpCOJNDunfL+An+H0U=";
   };
 
   build-system = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/abjad/default.nix b/pkgs/development/python-modules/abjad/default.nix
index e03212322041..4f89767c1b7a 100644
--- a/pkgs/development/python-modules/abjad/default.nix
+++ b/pkgs/development/python-modules/abjad/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "abjad";
-  version = "3.22";
+  version = "3.28";
   format = "setuptools";
 
   # see issue upstream indicating Python 3.12 support will come
@@ -23,7 +23,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-cTll4E5qPuacc7K3TFfK4IqtXGUHuiiU5J20poRuWbI=";
+    hash = "sha256-J4LPOSz34GvDRwpCG8yt4LAqt+dhDrfG/W451bZRpgk=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/about-time/default.nix b/pkgs/development/python-modules/about-time/default.nix
index 02f1ca4f917d..3271a11755b4 100644
--- a/pkgs/development/python-modules/about-time/default.nix
+++ b/pkgs/development/python-modules/about-time/default.nix
@@ -1,33 +1,31 @@
 {
   lib,
-  fetchPypi,
+  fetchFromGitHub,
   buildPythonPackage,
-  python,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "about-time";
-  version = "4.2.1";
-  format = "setuptools";
+  version = "4.2.2";
+  pyproject = true;
 
-  # PyPi release does not contain test files, but the repo has no release tags,
-  # so while having no tests is not ideal, follow the PyPi releases for now
-  # TODO: switch to fetchFromGitHub once this issue is fixed:
-  # https://github.com/rsalmei/about-time/issues/15
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-alOIYtM85n2ZdCnRSZgxDh2/2my32bv795nEcJhH/s4=";
+  src = fetchFromGitHub {
+    owner = "rsalmei";
+    repo = "about-time";
+    tag = "v${version}";
+    hash = "sha256-a7jFVrxUvdR5UdeNNXSTsXC/Q76unedMLmcu0iTS3Tk=";
   };
 
-  doCheck = false;
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "setuptools~=75.3" setuptools
+  '';
+
+  build-system = [ setuptools ];
 
   pythonImportsCheck = [ "about_time" ];
 
-  postInstall = ''
-    mkdir -p $out/share/doc/python${python.pythonVersion}-$pname-$version/
-    mv $out/LICENSE $out/share/doc/python${python.pythonVersion}-$pname-$version/
-  '';
-
   meta = with lib; {
     description = "Cool helper for tracking time and throughput of code blocks, with beautiful human friendly renditions";
     homepage = "https://github.com/rsalmei/about-time";
diff --git a/pkgs/development/python-modules/absl-py/default.nix b/pkgs/development/python-modules/absl-py/default.nix
index ca12c857ca09..21552b076199 100644
--- a/pkgs/development/python-modules/absl-py/default.nix
+++ b/pkgs/development/python-modules/absl-py/default.nix
@@ -2,22 +2,22 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  setuptools,
+  hatchling,
 }:
 
 buildPythonPackage rec {
   pname = "absl-py";
-  version = "2.2.2";
+  version = "2.3.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "abseil";
     repo = "abseil-py";
     tag = "v${version}";
-    hash = "sha256-KsaFfdq6+Pc8k0gM1y+HJ1v6VrTAK7TBgh92BSFuc+Q=";
+    hash = "sha256-U8doys7SoOhtUkF0dsCFKnM9ItOoi5a6cK6zGOe/U8s=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [ hatchling ];
 
   # checks use bazel; should be revisited
   doCheck = false;
@@ -27,7 +27,7 @@ buildPythonPackage rec {
   meta = {
     description = "Abseil Python Common Libraries";
     homepage = "https://github.com/abseil/abseil-py";
-    changelog = "https://github.com/abseil/abseil-py/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/abseil/abseil-py/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/adlfs/default.nix b/pkgs/development/python-modules/adlfs/default.nix
index 729323af99ff..d0f3e8b5a399 100644
--- a/pkgs/development/python-modules/adlfs/default.nix
+++ b/pkgs/development/python-modules/adlfs/default.nix
@@ -41,6 +41,8 @@ buildPythonPackage rec {
     fsspec
   ];
 
+  pythonRelaxDeps = [ "azure-datalake-store" ];
+
   # Tests require a running Docker instance
   doCheck = false;
 
diff --git a/pkgs/development/python-modules/afsapi/default.nix b/pkgs/development/python-modules/afsapi/default.nix
index d58391180025..40ce655ab559 100644
--- a/pkgs/development/python-modules/afsapi/default.nix
+++ b/pkgs/development/python-modules/afsapi/default.nix
@@ -31,6 +31,8 @@ buildPythonPackage rec {
     lxml
   ];
 
+  doCheck = false; # Failed: async def functions are not natively supported.
+
   nativeCheckInputs = [
     pytest-aiohttp
     pytestCheckHook
diff --git a/pkgs/development/python-modules/aioasuswrt/default.nix b/pkgs/development/python-modules/aioasuswrt/default.nix
index ff54fa553086..2544f86902ee 100644
--- a/pkgs/development/python-modules/aioasuswrt/default.nix
+++ b/pkgs/development/python-modules/aioasuswrt/default.nix
@@ -4,7 +4,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   pytest-cov-stub,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-mock,
   pytestCheckHook,
   pythonOlder,
@@ -30,7 +30,7 @@ buildPythonPackage rec {
   dependencies = [ asyncssh ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-cov-stub
     pytest-mock
     pytestCheckHook
diff --git a/pkgs/development/python-modules/aioboto3/boto3-compat.patch b/pkgs/development/python-modules/aioboto3/boto3-compat.patch
new file mode 100644
index 000000000000..7f4b2272e509
--- /dev/null
+++ b/pkgs/development/python-modules/aioboto3/boto3-compat.patch
@@ -0,0 +1,15 @@
+diff --git a/aioboto3/session.py b/aioboto3/session.py
+index b6c2129..c97eaaf 100644
+--- a/aioboto3/session.py
++++ b/aioboto3/session.py
+@@ -79,7 +79,9 @@ class Session(boto3.session.Session):
+ 
+         if any(creds):
+             if self._account_id_set_without_credentials(
+-                aws_account_id, aws_access_key_id, aws_secret_access_key
++                aws_account_id=aws_account_id,
++                aws_access_key_id=aws_access_key_id,
++                aws_secret_access_key=aws_secret_access_key
+             ):
+                 raise NoCredentialsError()
+ 
diff --git a/pkgs/development/python-modules/aioboto3/default.nix b/pkgs/development/python-modules/aioboto3/default.nix
index c36746e5cc71..157aae9026e0 100644
--- a/pkgs/development/python-modules/aioboto3/default.nix
+++ b/pkgs/development/python-modules/aioboto3/default.nix
@@ -16,16 +16,19 @@
 
 buildPythonPackage rec {
   pname = "aioboto3";
-  version = "14.3.0";
+  version = "15.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
-    owner = "terrycain";
+    owner = "terricain";
     repo = "aioboto3";
     tag = "v${version}";
-    hash = "sha256-3GdTpbU0uEEzezQPHJTGPB42Qu604eIhcIAP4rZMQiY=";
+    hash = "sha256-Z4tUwTFaXC3BGUKc1FPY0xoaUViAEiZNeP5REWotw2M=";
   };
 
+  # https://github.com/terricain/aioboto3/pull/377
+  patches = [ ./boto3-compat.patch ];
+
   pythonRelaxDeps = [
     "aiobotocore"
   ];
@@ -63,8 +66,8 @@ buildPythonPackage rec {
 
   meta = {
     description = "Wrapper to use boto3 resources with the aiobotocore async backend";
-    homepage = "https://github.com/terrycain/aioboto3";
-    changelog = "https://github.com/terrycain/aioboto3/blob/${src.rev}/CHANGELOG.rst";
+    homepage = "https://github.com/terricain/aioboto3";
+    changelog = "https://github.com/terricain/aioboto3/blob/${src.rev}/CHANGELOG.rst";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ mbalatsko ];
   };
diff --git a/pkgs/development/python-modules/aiobotocore/default.nix b/pkgs/development/python-modules/aiobotocore/default.nix
index a1dbe65c0123..d9afb4a006cb 100644
--- a/pkgs/development/python-modules/aiobotocore/default.nix
+++ b/pkgs/development/python-modules/aiobotocore/default.nix
@@ -17,20 +17,21 @@
   werkzeug,
   awscli,
   boto3,
+  httpx,
   setuptools,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "aiobotocore";
-  version = "2.22.0";
+  version = "2.23.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "aio-libs";
     repo = "aiobotocore";
     tag = version;
-    hash = "sha256-Zzwj0osXqWSCWsuxlpiqpptzjLhFwlqfXqiWMP7CgXg=";
+    hash = "sha256-3aqA+zjXgYGqDRF0x2eS458A0N7Dmc0tfOcnukjf0DM=";
   };
 
   # Relax version constraints: aiobotocore works with newer botocore versions
@@ -55,6 +56,7 @@ buildPythonPackage rec {
   optional-dependencies = {
     awscli = [ awscli ];
     boto3 = [ boto3 ];
+    httpx = [ httpx ];
   };
 
   nativeCheckInputs = [
@@ -69,11 +71,14 @@ buildPythonPackage rec {
 
   pythonImportsCheck = [ "aiobotocore" ];
 
+  disabledTests = [
+    # TypeError: sequence item 1: expected str instance, MagicMock found
+    "test_signers_generate_db_auth_token"
+  ];
+
   disabledTestPaths = [
     # Test requires network access
     "tests/test_version.py"
-    # Test not compatible with latest moto
-    "tests/python3.8/test_eventstreams.py"
     "tests/test_basic_s3.py"
     "tests/test_batch.py"
     "tests/test_dynamodb.py"
@@ -86,6 +91,11 @@ buildPythonPackage rec {
     "tests/test_waiter.py"
   ];
 
+  disabledTestMarks = [
+    # Exclude localonly tests (incompatible with moto mocks)
+    "localonly"
+  ];
+
   __darwinAllowLocalNetworking = true;
 
   meta = {
diff --git a/pkgs/development/python-modules/aiodiscover/default.nix b/pkgs/development/python-modules/aiodiscover/default.nix
index 8420da320779..18845fc8c92a 100644
--- a/pkgs/development/python-modules/aiodiscover/default.nix
+++ b/pkgs/development/python-modules/aiodiscover/default.nix
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python module to discover hosts via ARP and PTR lookup";
     homepage = "https://github.com/bdraco/aiodiscover";
-    changelog = "https://github.com/bdraco/aiodiscover/releases/tag/v${version}";
+    changelog = "https://github.com/bdraco/aiodiscover/releases/tag/${src.tag}";
     license = with licenses; [ asl20 ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/aioeafm/default.nix b/pkgs/development/python-modules/aioeafm/default.nix
index 056e9bd6b8eb..95b287786cdd 100644
--- a/pkgs/development/python-modules/aioeafm/default.nix
+++ b/pkgs/development/python-modules/aioeafm/default.nix
@@ -37,6 +37,8 @@ buildPythonPackage rec {
 
   dependencies = [ aiohttp ];
 
+  doCheck = false; # Failed: async def functions are not natively supported.
+
   nativeCheckInputs = [
     pytest-aiohttp
     pytestCheckHook
diff --git a/pkgs/development/python-modules/aioecowitt/default.nix b/pkgs/development/python-modules/aioecowitt/default.nix
index 15be3f422192..88f0db5ac7b4 100644
--- a/pkgs/development/python-modules/aioecowitt/default.nix
+++ b/pkgs/development/python-modules/aioecowitt/default.nix
@@ -4,6 +4,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   meteocalc,
+  pytest-asyncio_0,
   pytest-aiohttp,
   pytestCheckHook,
   pythonOlder,
@@ -32,7 +33,8 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-aiohttp
+    pytest-asyncio_0
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/aiohappyeyeballs/default.nix b/pkgs/development/python-modules/aiohappyeyeballs/default.nix
index f1c32db66e93..1ed3bcfe9b66 100644
--- a/pkgs/development/python-modules/aiohappyeyeballs/default.nix
+++ b/pkgs/development/python-modules/aiohappyeyeballs/default.nix
@@ -14,7 +14,7 @@
   sphinxHook,
 
   # tests
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-cov-stub,
   pytestCheckHook,
 }:
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   };
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-cov-stub
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/aiohomekit/default.nix b/pkgs/development/python-modules/aiohomekit/default.nix
index 4bd67403b3ad..3498ee8f5a6b 100644
--- a/pkgs/development/python-modules/aiohomekit/default.nix
+++ b/pkgs/development/python-modules/aiohomekit/default.nix
@@ -13,6 +13,7 @@
   fetchFromGitHub,
   orjson,
   poetry-core,
+  pytest-asyncio_0,
   pytest-aiohttp,
   pytestCheckHook,
   pythonOlder,
@@ -50,7 +51,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-aiohttp
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/aiohttp-sse/default.nix b/pkgs/development/python-modules/aiohttp-sse/default.nix
index 851f0fef08cb..ec7f64216c64 100644
--- a/pkgs/development/python-modules/aiohttp-sse/default.nix
+++ b/pkgs/development/python-modules/aiohttp-sse/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   lib,
   pytest-aiohttp,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-cov-stub,
   pytestCheckHook,
   setuptools,
@@ -31,8 +31,8 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "aiohttp_sse" ];
 
   nativeCheckInputs = [
-    pytest-aiohttp
-    pytest-asyncio
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
+    pytest-asyncio_0
     pytest-cov-stub
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/aiohttp/default.nix b/pkgs/development/python-modules/aiohttp/default.nix
index b12fa8da9a9d..d39e8318943e 100644
--- a/pkgs/development/python-modules/aiohttp/default.nix
+++ b/pkgs/development/python-modules/aiohttp/default.nix
@@ -8,7 +8,7 @@
   isPyPy,
 
   # build-system
-  cython_3_1,
+  cython,
   pkgconfig,
   setuptools,
 
@@ -50,14 +50,14 @@
 
 buildPythonPackage rec {
   pname = "aiohttp";
-  version = "3.12.14";
+  version = "3.12.15";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "aio-libs";
     repo = "aiohttp";
     tag = "v${version}";
-    hash = "sha256-KPPxP6x/3sz2mDJNswh/xPatcMtVdYv3aArg//7tSao=";
+    hash = "sha256-nVDGSbzjCdyJFCsHq8kJigNA4vGs4Pg1Vyyvw+gKg2w=";
   };
 
   patches = lib.optionals (!lib.meta.availableOn stdenv.hostPlatform isa-l) [
@@ -75,7 +75,7 @@ buildPythonPackage rec {
   '';
 
   build-system = [
-    cython_3_1
+    cython
     pkgconfig
     setuptools
   ];
diff --git a/pkgs/development/python-modules/aioimaplib/default.nix b/pkgs/development/python-modules/aioimaplib/default.nix
index 2c9502ff289a..5d6205362fa5 100644
--- a/pkgs/development/python-modules/aioimaplib/default.nix
+++ b/pkgs/development/python-modules/aioimaplib/default.nix
@@ -7,7 +7,7 @@
   mock,
   poetry-core,
   pyopenssl,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pytz,
 }:
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     imaplib2
     mock
     pyopenssl
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
     pytz
   ];
diff --git a/pkgs/development/python-modules/aiolookin/default.nix b/pkgs/development/python-modules/aiolookin/default.nix
index 677d9ba7c72e..fa1d100cb914 100644
--- a/pkgs/development/python-modules/aiolookin/default.nix
+++ b/pkgs/development/python-modules/aiolookin/default.nix
@@ -26,6 +26,8 @@ buildPythonPackage rec {
 
   propagatedBuildInputs = [ aiohttp ];
 
+  doCheck = false; # all tests are async and no async plugin is configured
+
   nativeCheckInputs = [
     faker
     pytest-aiohttp
@@ -33,11 +35,6 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  disabledTests = [
-    # Not all tests are ready yet
-    "test_successful"
-  ];
-
   pythonImportsCheck = [ "aiolookin" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/aiomisc-pytest/default.nix b/pkgs/development/python-modules/aiomisc-pytest/default.nix
index 0e0add78bf19..1db59e19c44b 100644
--- a/pkgs/development/python-modules/aiomisc-pytest/default.nix
+++ b/pkgs/development/python-modules/aiomisc-pytest/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "aiomisc-pytest";
-  version = "1.2.1";
+  version = "1.3.4";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "aiomisc_pytest";
     inherit version;
-    hash = "sha256-4mWP77R3CoX+XhoT6BbxQtxpINpdmeozjYUsegNfMyU=";
+    hash = "sha256-9Of1pSUcMiIhkz7OW5erF4oDlf/ABkaamDBPg7+WbBE=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/aiomisc/default.nix b/pkgs/development/python-modules/aiomisc/default.nix
index f92816215373..b61f558e7146 100644
--- a/pkgs/development/python-modules/aiomisc/default.nix
+++ b/pkgs/development/python-modules/aiomisc/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "aiomisc";
-  version = "17.7.8";
+  version = "17.9.4";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Wfum+9M0Kx9GA9F2/fzhvETsQodNKnoRXSADFZl6Sf4=";
+    hash = "sha256-oSwMhomcPIN2JYterJuBUcmJtUx3rayADH1ugah+pI8=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/aionotion/default.nix b/pkgs/development/python-modules/aionotion/default.nix
index fb7ab4d6bad1..048ef8c0518f 100644
--- a/pkgs/development/python-modules/aionotion/default.nix
+++ b/pkgs/development/python-modules/aionotion/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "aionotion";
-  version = "2024.03.0";
+  version = "2025.02.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -29,9 +29,14 @@ buildPythonPackage rec {
     owner = "bachya";
     repo = "aionotion";
     tag = version;
-    hash = "sha256-BsbfLb5wCVxR8v2U2Zzt7LMl7XJcZWfVjZN47VDkhFc=";
+    hash = "sha256-MqH3CPp+dAX5DXtnHio95KGQ+Ok2TXrX6rn/AMx5OsY=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "poetry-core==" "poetry-core>="
+  '';
+
   nativeBuildInputs = [ poetry-core ];
 
   propagatedBuildInputs = [
@@ -44,6 +49,12 @@ buildPythonPackage rec {
     yarl
   ];
 
+  pythonRelaxDeps = [
+    "ciso8601"
+    "frozenlist"
+    "mashumaro"
+  ];
+
   __darwinAllowLocalNetworking = true;
 
   nativeCheckInputs = [
@@ -61,7 +72,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python library for Notion Home Monitoring";
     homepage = "https://github.com/bachya/aionotion";
-    changelog = "https://github.com/bachya/aionotion/releases/tag/${version}";
+    changelog = "https://github.com/bachya/aionotion/releases/tag/${src.tag}";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/aiorpcx/default.nix b/pkgs/development/python-modules/aiorpcx/default.nix
index 9ed371bb9d86..c217cdfe6f3b 100644
--- a/pkgs/development/python-modules/aiorpcx/default.nix
+++ b/pkgs/development/python-modules/aiorpcx/default.nix
@@ -4,7 +4,7 @@
   buildPythonPackage,
   setuptools,
   websockets,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
 }:
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   optional-dependencies.ws = [ websockets ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ]
   ++ lib.flatten (lib.attrValues optional-dependencies);
diff --git a/pkgs/development/python-modules/aiortm/default.nix b/pkgs/development/python-modules/aiortm/default.nix
index 4bc009caa27c..a55633c9f229 100644
--- a/pkgs/development/python-modules/aiortm/default.nix
+++ b/pkgs/development/python-modules/aiortm/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "aiortm";
-  version = "0.10.0";
+  version = "0.11.0";
   pyproject = true;
 
   disabled = pythonOlder "3.12";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "MartinHjelmare";
     repo = "aiortm";
     tag = "v${version}";
-    hash = "sha256-YclrU24eyk88eOc/nlgeWJ/Fo9SveCzRqQCKYAA9Y9s=";
+    hash = "sha256-KghKxaa1MhNH13NdUpDiT5h8ZEj5aWLUVhvQKvLC+oM=";
   };
 
   pythonRelaxDeps = [ "typer" ];
@@ -57,7 +57,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Library for the Remember the Milk API";
     homepage = "https://github.com/MartinHjelmare/aiortm";
-    changelog = "https://github.com/MartinHjelmare/aiortm/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/MartinHjelmare/aiortm/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
     mainProgram = "aiortm";
diff --git a/pkgs/development/python-modules/aiosonic/default.nix b/pkgs/development/python-modules/aiosonic/default.nix
index 4a7872e14464..e1586de94bfb 100644
--- a/pkgs/development/python-modules/aiosonic/default.nix
+++ b/pkgs/development/python-modules/aiosonic/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "aiosonic";
-  version = "0.22.0";
+  version = "0.24.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -34,7 +34,7 @@ buildPythonPackage rec {
     owner = "sonic182";
     repo = "aiosonic";
     tag = version;
-    hash = "sha256-wBYGiSTSRhi11uqTyGgF1YpnBVoDraCr2GKC8VkQEWc=";
+    hash = "sha256-Yh1AD/tBHQBpwAA86XuP9UuXnCAFcMw/XSv6z46XP0k=";
   };
 
   postPatch = ''
@@ -113,7 +113,7 @@ buildPythonPackage rec {
     ];
 
   meta = {
-    changelog = "https://github.com/sonic182/aiosonic/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/sonic182/aiosonic/blob/${src.tag}/CHANGELOG.md";
     description = "Very fast Python asyncio http client";
     license = lib.licenses.mit;
     homepage = "https://github.com/sonic182/aiosonic";
diff --git a/pkgs/development/python-modules/aiosql/default.nix b/pkgs/development/python-modules/aiosql/default.nix
index 4528d603b2a3..1c233d8f9f2c 100644
--- a/pkgs/development/python-modules/aiosql/default.nix
+++ b/pkgs/development/python-modules/aiosql/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "aiosql";
-  version = "13.3";
+  version = "13.4";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "nackjicholson";
     repo = "aiosql";
     tag = version;
-    hash = "sha256-FCCS91nH/HPhez+bJE7+JoFW4hKkXMdY4bAaEOZ06jU=";
+    hash = "sha256-a3pRzcDMXdaDs0ub6k5bPRwnk+RCbxZ7ceIt8/fMSPg=";
   };
 
   sphinxRoot = "docs/source";
@@ -52,7 +52,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Simple SQL in Python";
     homepage = "https://nackjicholson.github.io/aiosql/";
-    changelog = "https://github.com/nackjicholson/aiosql/releases/tag/${version}";
+    changelog = "https://github.com/nackjicholson/aiosql/releases/tag/${src.tag}";
     license = with licenses; [ bsd2 ];
     maintainers = with maintainers; [ kaction ];
   };
diff --git a/pkgs/development/python-modules/aiostream/default.nix b/pkgs/development/python-modules/aiostream/default.nix
index 3d4bbd2dc63b..de2b2fec0067 100644
--- a/pkgs/development/python-modules/aiostream/default.nix
+++ b/pkgs/development/python-modules/aiostream/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "aiostream";
-  version = "0.6.4";
+  version = "0.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "vxgmichel";
     repo = "aiostream";
     tag = "v${version}";
-    hash = "sha256-hRbPK1JsB/JQuSjj81YMUAI8eDUyXCOFhdW22ZJ47xU=";
+    hash = "sha256-oOx1LG3UyMJRm/HvmrHT00jTp3+XzmvS2XRH4BJNyPE=";
   };
 
   build-system = [ setuptools ];
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Generator-based operators for asynchronous iteration";
     homepage = "https://aiostream.readthedocs.io";
-    changelog = "https://github.com/vxgmichel/aiostream/releases/tag/v${version}";
+    changelog = "https://github.com/vxgmichel/aiostream/releases/tag/${src.tag}";
     license = licenses.gpl3Only;
     maintainers = with maintainers; [ rmcgibbo ];
   };
diff --git a/pkgs/development/python-modules/aiowebostv/default.nix b/pkgs/development/python-modules/aiowebostv/default.nix
index 2c8e20c3d8b4..e4f5283f5d93 100644
--- a/pkgs/development/python-modules/aiowebostv/default.nix
+++ b/pkgs/development/python-modules/aiowebostv/default.nix
@@ -21,6 +21,11 @@ buildPythonPackage rec {
     hash = "sha256-VBdHI6aGfhcgDdwspToHp3iNFQRT0Z+Fseq0eNdUwTo=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail 'version = "0.0.0"' 'version = "${version}"'
+  '';
+
   build-system = [ setuptools ];
 
   dependencies = [ aiohttp ];
diff --git a/pkgs/development/python-modules/albucore/default.nix b/pkgs/development/python-modules/albucore/default.nix
index 4ca66b260401..6a4491840858 100644
--- a/pkgs/development/python-modules/albucore/default.nix
+++ b/pkgs/development/python-modules/albucore/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "albucore";
-  version = "0.0.24";
+  version = "0.0.33";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "albumentations-team";
     repo = "albucore";
     tag = version;
-    hash = "sha256-frVMPW3au/6vPRY89GIt7chCPkUMl13DpPqCPqIjz/o=";
+    hash = "sha256-OQYIvJM3pLna5rr1H7pVDhUR9sLmx032AZ9SWXQqMjc=";
   };
 
   pythonRelaxDeps = [ "opencv-python" ];
@@ -43,7 +43,7 @@ buildPythonPackage rec {
   meta = {
     description = "High-performance image processing library to optimize and extend Albumentations with specialized functions for image transformations";
     homepage = "https://github.com/albumentations-team/albucore";
-    changelog = "https://github.com/albumentations-team/albucore/releases/tag/${version}";
+    changelog = "https://github.com/albumentations-team/albucore/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/alembic/default.nix b/pkgs/development/python-modules/alembic/default.nix
index 3ea57cab5cea..1962325dc373 100644
--- a/pkgs/development/python-modules/alembic/default.nix
+++ b/pkgs/development/python-modules/alembic/default.nix
@@ -2,34 +2,30 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  pythonOlder,
 
   # build-system
   setuptools,
 
   # dependencies
-  importlib-metadata,
-  importlib-resources,
   mako,
   sqlalchemy,
   typing-extensions,
 
   # tests
-  pytest7CheckHook,
+  black,
+  pytestCheckHook,
   pytest-xdist,
   python-dateutil,
 }:
 
 buildPythonPackage rec {
   pname = "alembic";
-  version = "1.15.2";
+  version = "1.16.4";
   pyproject = true;
 
-  disabled = pythonOlder "3.6";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HHI5G73v/M/jF+77pobLmjwHgAVHiIVBO5XDsmxXqKc=";
+    hash = "sha256-76tq2g3Q+uLJIGCADgv1wdwmrxWhDgL7S6v/FktHJeI=";
   };
 
   build-system = [ setuptools ];
@@ -38,16 +34,13 @@ buildPythonPackage rec {
     mako
     sqlalchemy
     typing-extensions
-  ]
-  ++ lib.optionals (pythonOlder "3.9") [
-    importlib-resources
-    importlib-metadata
   ];
 
   pythonImportsCheck = [ "alembic" ];
 
   nativeCheckInputs = [
-    pytest7CheckHook
+    black
+    pytestCheckHook
     pytest-xdist
     python-dateutil
   ];
diff --git a/pkgs/development/python-modules/alive-progress/default.nix b/pkgs/development/python-modules/alive-progress/default.nix
index f981c8d1ae92..c795aed0f14d 100644
--- a/pkgs/development/python-modules/alive-progress/default.nix
+++ b/pkgs/development/python-modules/alive-progress/default.nix
@@ -37,6 +37,8 @@ buildPythonPackage rec {
     grapheme
   ];
 
+  pythonRelaxDeps = [ "about_time" ];
+
   nativeCheckInputs = [
     click
     pytestCheckHook
diff --git a/pkgs/development/python-modules/allure-behave/default.nix b/pkgs/development/python-modules/allure-behave/default.nix
index 4b80c97c8777..8dcc076cab59 100644
--- a/pkgs/development/python-modules/allure-behave/default.nix
+++ b/pkgs/development/python-modules/allure-behave/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "allure-behave";
-  version = "2.13.5";
+  version = "2.15.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-M4yizHOV0e491y9dfZLYkg8a3g4H3evGN7OOYeBtyNw=";
+    hash = "sha256-puJuaeA6uFJRF1ZS7jWY55Mmk2Y4SQiuhZGEGi7yexs=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/allure-pytest/default.nix b/pkgs/development/python-modules/allure-pytest/default.nix
index 88fc7054f1e6..6eaec2b6e5ad 100644
--- a/pkgs/development/python-modules/allure-pytest/default.nix
+++ b/pkgs/development/python-modules/allure-pytest/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "allure-pytest";
-  version = "2.13.5";
+  version = "2.15.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-DvjheQxEqYjba4PE1PXpFFHixMjqEGAd+ohSjSOvz24=";
+    hash = "sha256-uPRk07/rbLXmp35w6s0ao3YhM2d8q+zlegfJ87zUseg=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/allure-python-commons-test/default.nix b/pkgs/development/python-modules/allure-python-commons-test/default.nix
index 5a4f5049d9cc..764641b7c6bb 100644
--- a/pkgs/development/python-modules/allure-python-commons-test/default.nix
+++ b/pkgs/development/python-modules/allure-python-commons-test/default.nix
@@ -12,12 +12,13 @@
 
 buildPythonPackage rec {
   pname = "allure-python-commons-test";
-  version = "2.13.5";
+  version = "2.15.0";
   format = "setuptools";
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-pWkLVfBrLEhdhuTE95K3aqrhEY2wEyo5uRzuJC3ngjE=";
+    pname = "allure_python_commons_test";
+    inherit version;
+    hash = "sha256-5l/9K6ToYEGaYXOmVxB188wu9gQ+2cMHxfVNlX8Rz9g=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/allure-python-commons/default.nix b/pkgs/development/python-modules/allure-python-commons/default.nix
index 30881b90f3fd..57571c89095c 100644
--- a/pkgs/development/python-modules/allure-python-commons/default.nix
+++ b/pkgs/development/python-modules/allure-python-commons/default.nix
@@ -13,30 +13,22 @@
 
 buildPythonPackage rec {
   pname = "allure-python-commons";
-  version = "2.13.5";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "2.15.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-ojLnlVgR+Yjkmkwd1sFszn6bgdDqBCKx5WVNMlTiyvM=";
+    pname = "allure_python_commons";
+    inherit version;
+    hash = "sha256-T2Oci7S3nfDZTxuqiHgsk5m+P0X9g5rlg6MUpdRRuXg=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
+  build-system = [ setuptools-scm ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     attrs
     pluggy
-    six
-    allure-python-commons-test
   ];
 
-  checkPhase = ''
-    ${python.interpreter} -m doctest ./src/utils.py
-    ${python.interpreter} -m doctest ./src/mapping.py
-  '';
-
   pythonImportsCheck = [
     "allure"
     "allure_commons"
diff --git a/pkgs/development/python-modules/amazon-kclpy/default.nix b/pkgs/development/python-modules/amazon-kclpy/default.nix
index 591ee5568390..3c039de4dbab 100644
--- a/pkgs/development/python-modules/amazon-kclpy/default.nix
+++ b/pkgs/development/python-modules/amazon-kclpy/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "amazon-kclpy";
-  version = "3.0.1";
+  version = "3.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "awslabs";
     repo = "amazon-kinesis-client-python";
     tag = "v${version}";
-    hash = "sha256-P/kYRFDmWcqvnAaKYx22PwtC51JlYB0qopO3+QuRHAk=";
+    hash = "sha256-nboEZwRlhbr176H4b6ESm3LfVZCoKz3yKrQptERsLgg=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/amcrest/default.nix b/pkgs/development/python-modules/amcrest/default.nix
index b3fd5616ea92..2d48513f3fd3 100644
--- a/pkgs/development/python-modules/amcrest/default.nix
+++ b/pkgs/development/python-modules/amcrest/default.nix
@@ -56,7 +56,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python module for Amcrest and Dahua Cameras";
     homepage = "https://github.com/tchellomello/python-amcrest";
-    changelog = "https://github.com/tchellomello/python-amcrest/releases/tag/${version}";
+    changelog = "https://github.com/tchellomello/python-amcrest/releases/tag/${src.tag}";
     license = licenses.gpl2Only;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/anndata/default.nix b/pkgs/development/python-modules/anndata/default.nix
index dac4af2f18d0..de98a116f529 100644
--- a/pkgs/development/python-modules/anndata/default.nix
+++ b/pkgs/development/python-modules/anndata/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "anndata";
-  version = "0.11.4";
+  version = "0.12.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scverse";
     repo = "anndata";
     tag = version;
-    hash = "sha256-9RDR0veZ8n2sq0kUbAkS2nP57u47cQxmubzuWWYBKBY=";
+    hash = "sha256-vxyRJ77PIkRIyl4aTQggXSQVoMKLQe3mCA5H3W/wmN8=";
   };
 
   build-system = [
@@ -148,7 +148,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "anndata" ];
 
   meta = {
-    changelog = "https://github.com/scverse/anndata/blob/main/docs/release-notes/${version}.md";
+    changelog = "https://github.com/scverse/anndata/blob/main/docs/release-notes/${src.tag}.md";
     description = "Python package for handling annotated data matrices in memory and on disk";
     homepage = "https://anndata.readthedocs.io/";
     license = lib.licenses.bsd3;
diff --git a/pkgs/development/python-modules/annotatedyaml/default.nix b/pkgs/development/python-modules/annotatedyaml/default.nix
index dc790ed0902b..16d589e587e0 100644
--- a/pkgs/development/python-modules/annotatedyaml/default.nix
+++ b/pkgs/development/python-modules/annotatedyaml/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "annotatedyaml";
-  version = "0.4.5";
+  version = "1.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "home-assistant-libs";
     repo = "annotatedyaml";
     tag = "v${version}";
-    hash = "sha256-AmgM5KF8O8/rkR/9PmTzcyQaSlEDcYBDDRq5ujwANR0=";
+    hash = "sha256-bVXhKm69A5FIXYY2yq7jXPIK7lSCQD20a3oX1GdqOLY=";
   };
 
   build-system = [
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   meta = {
     description = "Annotated YAML that supports secrets for Python";
     homepage = "https://github.com/home-assistant-libs/annotatedyaml";
-    changelog = "https://github.com/home-assistant-libs/annotatedyaml/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/home-assistant-libs/annotatedyaml/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/anova-wifi/default.nix b/pkgs/development/python-modules/anova-wifi/default.nix
index 07f9bcf2dfe5..b7374b5caa86 100644
--- a/pkgs/development/python-modules/anova-wifi/default.nix
+++ b/pkgs/development/python-modules/anova-wifi/default.nix
@@ -41,6 +41,8 @@ buildPythonPackage rec {
   disabledTests = [
     # Makes network calls
     "test_async_data_1"
+    # async def functions are not natively supported.
+    "test_can_create"
   ];
 
   pythonImportsCheck = [ "anova_wifi" ];
diff --git a/pkgs/development/python-modules/ansible/core.nix b/pkgs/development/python-modules/ansible/core.nix
index 2b635f5160b0..12a897f95e98 100644
--- a/pkgs/development/python-modules/ansible/core.nix
+++ b/pkgs/development/python-modules/ansible/core.nix
@@ -47,9 +47,6 @@ buildPythonPackage rec {
   # the python interpreter again, as it would break execution of
   # connection plugins.
   postPatch = ''
-    substituteInPlace lib/ansible/executor/task_executor.py \
-      --replace "[python," "["
-
     patchShebangs --build packaging/cli-doc/build.py
 
     SETUPTOOLS_PATTERN='"setuptools[0-9 <>=.,]+"'
@@ -60,6 +57,9 @@ buildPythonPackage rec {
     else
       exit 2
     fi
+
+    substituteInPlace pyproject.toml \
+      --replace-fail "wheel == 0.45.1" wheel
   '';
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/anthropic/default.nix b/pkgs/development/python-modules/anthropic/default.nix
index 00073ddaf14d..397c4f6e3bfa 100644
--- a/pkgs/development/python-modules/anthropic/default.nix
+++ b/pkgs/development/python-modules/anthropic/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "anthropic";
-  version = "0.59.0";
+  version = "0.60.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "anthropics";
     repo = "anthropic-sdk-python";
     tag = "v${version}";
-    hash = "sha256-JUgJB0+9zfmj3asjn7FOozNB9STkKEvObbTP3KLDV+M=";
+    hash = "sha256-NwwZjpamBtRHYs/k+i2TfydTEzU2aB5+IxkONXlCqEk=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/anyio/default.nix b/pkgs/development/python-modules/anyio/default.nix
index afe573ab3feb..99fd7ff5dcab 100644
--- a/pkgs/development/python-modules/anyio/default.nix
+++ b/pkgs/development/python-modules/anyio/default.nix
@@ -33,7 +33,7 @@
 
 buildPythonPackage rec {
   pname = "anyio";
-  version = "4.9.0";
+  version = "4.10.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -42,7 +42,7 @@ buildPythonPackage rec {
     owner = "agronholm";
     repo = "anyio";
     tag = version;
-    hash = "sha256-kISaBHDkMOYYU9sdiQAXiq3jp1ehWOYFpvFbuceBWB0=";
+    hash = "sha256-9nOGQTqdO3VzA9c97BpZqqwpll5O5+3gRvF/l2Y2ars=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/anywidget/default.nix b/pkgs/development/python-modules/anywidget/default.nix
index e79ac1a6e939..1420201e9707 100644
--- a/pkgs/development/python-modules/anywidget/default.nix
+++ b/pkgs/development/python-modules/anywidget/default.nix
@@ -59,6 +59,16 @@ buildPythonPackage rec {
   disabledTests = [
     # requires package.json
     "test_version"
+
+    # AssertionError: assert not {140737277121872: <MockComm id='140737277118512'>}
+    "test_descriptor_with_psygnal"
+    "test_descriptor_with_pydantic"
+    "test_descriptor_with_msgspec"
+    "test_descriptor_with_traitlets"
+    "test_infer_file_contents"
+
+    #  assert not {<function _connect_psygnal.<locals>._disconnect at 0x7ffff3617e...
+    "test_descriptor_with_psygnal"
   ];
 
   pythonImportsCheck = [ "anywidget" ];
diff --git a/pkgs/development/python-modules/apache-beam/default.nix b/pkgs/development/python-modules/apache-beam/default.nix
index 73c85297671d..f13ce79961f7 100644
--- a/pkgs/development/python-modules/apache-beam/default.nix
+++ b/pkgs/development/python-modules/apache-beam/default.nix
@@ -62,14 +62,14 @@
 
 buildPythonPackage rec {
   pname = "apache-beam";
-  version = "2.65.0";
+  version = "2.66.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "apache";
     repo = "beam";
     tag = "v${version}";
-    hash = "sha256-vDW0PVNep+egIZBe4t8IPwLgsQDmoO4rrA4wUoAHzfg=";
+    hash = "sha256-nRofy9pvhO5SUvkIk73ViFm1gPWxEhj1rAUeCVYIpYs=";
   };
 
   pythonRelaxDeps = [
@@ -372,7 +372,7 @@ buildPythonPackage rec {
   meta = {
     description = "Unified model for defining both batch and streaming data-parallel processing pipelines";
     homepage = "https://beam.apache.org/";
-    changelog = "https://github.com/apache/beam/blob/release-${version}/CHANGES.md";
+    changelog = "https://github.com/apache/beam/blob/release-${src.tag}/CHANGES.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ ndl ];
   };
diff --git a/pkgs/development/python-modules/apischema/default.nix b/pkgs/development/python-modules/apischema/default.nix
index e30e9de5c916..b470b3454d8c 100644
--- a/pkgs/development/python-modules/apischema/default.nix
+++ b/pkgs/development/python-modules/apischema/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   graphql-core,
   pytest-asyncio,
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonOlder,
   setuptools,
 }:
@@ -37,7 +37,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     pytest-asyncio
-    pytestCheckHook
+    pytest8_3CheckHook
   ]
   ++ lib.flatten (builtins.attrValues optional-dependencies);
 
diff --git a/pkgs/development/python-modules/apscheduler/default.nix b/pkgs/development/python-modules/apscheduler/default.nix
index ade71286799d..028df647f83a 100644
--- a/pkgs/development/python-modules/apscheduler/default.nix
+++ b/pkgs/development/python-modules/apscheduler/default.nix
@@ -7,7 +7,7 @@
   pytest-asyncio,
   pytest-cov-stub,
   pytest-tornado,
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonOlder,
   pytz,
   setuptools,
@@ -31,6 +31,10 @@ buildPythonPackage rec {
     hash = "sha256-tFEm9yXf8CqcipSYtM7JM6WQ5Qm0YtgWhZvZOBAzy+w=";
   };
 
+  postPatch = ''
+    sed -i "/addopts/d" pyproject.toml
+  '';
+
   build-system = [
     setuptools
     setuptools-scm
@@ -45,7 +49,7 @@ buildPythonPackage rec {
     pytest-asyncio
     pytest-cov-stub
     pytest-tornado
-    pytestCheckHook
+    pytest8_3CheckHook
     pytz
     tornado
     twisted
diff --git a/pkgs/development/python-modules/apycula/default.nix b/pkgs/development/python-modules/apycula/default.nix
index d3029efed1bd..2d882dc92005 100644
--- a/pkgs/development/python-modules/apycula/default.nix
+++ b/pkgs/development/python-modules/apycula/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "apycula";
-  version = "0.18";
+  version = "0.21";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "Apycula";
-    hash = "sha256-nUaXnx4xFNH5wKZRaFXt0uLAgLm5/dTSKhiZQoSL8pg=";
+    hash = "sha256-rh+1U1bqyrX3Mv1HUl22ykUHx5Zaq59suc7ZVAOi0mo=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/arcam-fmj/default.nix b/pkgs/development/python-modules/arcam-fmj/default.nix
index b626683a1188..94ce7ed66ada 100644
--- a/pkgs/development/python-modules/arcam-fmj/default.nix
+++ b/pkgs/development/python-modules/arcam-fmj/default.nix
@@ -8,6 +8,7 @@
   aiohttp,
   attrs,
   defusedxml,
+  pytest-asyncio_0,
   pytest-aiohttp,
   pytest-mock,
   pytestCheckHook,
@@ -15,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "arcam-fmj";
-  version = "1.8.2";
+  version = "2.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -24,7 +25,7 @@ buildPythonPackage rec {
     owner = "elupus";
     repo = "arcam_fmj";
     tag = version;
-    hash = "sha256-iks3ENcv7OtU30kZyG6Z7bG/WrYQQLbfXP55IkltmaE=";
+    hash = "sha256-OiBTlAcSLhaMWbp5k+0yU1amSpLKnJA+3Q56lyiSDUA=";
   };
 
   build-system = [ setuptools ];
@@ -36,6 +37,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    pytest-asyncio_0
     pytest-aiohttp
     pytest-mock
     pytestCheckHook
@@ -65,7 +67,7 @@ buildPythonPackage rec {
     description = "Python library for speaking to Arcam receivers";
     mainProgram = "arcam-fmj";
     homepage = "https://github.com/elupus/arcam_fmj";
-    changelog = "https://github.com/elupus/arcam_fmj/releases/tag/${version}";
+    changelog = "https://github.com/elupus/arcam_fmj/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ dotlambda ];
   };
diff --git a/pkgs/development/python-modules/aresponses/default.nix b/pkgs/development/python-modules/aresponses/default.nix
index 5c8c98177b69..d3557ea7278e 100644
--- a/pkgs/development/python-modules/aresponses/default.nix
+++ b/pkgs/development/python-modules/aresponses/default.nix
@@ -4,7 +4,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   pythonOlder,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   setuptools,
 }:
@@ -27,7 +27,7 @@ buildPythonPackage rec {
 
   dependencies = [
     aiohttp
-    pytest-asyncio
+    pytest-asyncio_0
   ];
 
   nativeCheckInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/argon2-cffi-bindings/default.nix b/pkgs/development/python-modules/argon2-cffi-bindings/default.nix
index 0df49f583588..2f9c1b7f70b7 100644
--- a/pkgs/development/python-modules/argon2-cffi-bindings/default.nix
+++ b/pkgs/development/python-modules/argon2-cffi-bindings/default.nix
@@ -1,38 +1,42 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   libargon2,
   cffi,
   setuptools-scm,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "argon2-cffi-bindings";
-  version = "21.2.0";
-  format = "setuptools";
+  version = "25.1.0";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "bb89ceffa6c791807d1305ceb77dbfacc5aa499891d2c55661c6459651fc39e3";
+  src = fetchFromGitHub {
+    owner = "hynek";
+    repo = "argon2-cffi-bindings";
+    tag = version;
+    hash = "sha256-UDPxwqEpsmByAPM7lz3cxZz8jWwCEdghPlKXt8zQrfc=";
   };
 
   buildInputs = [ libargon2 ];
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools-scm
     cffi
   ];
 
-  propagatedBuildInputs = [ cffi ];
+  dependencies = [ cffi ];
 
   env.ARGON2_CFFI_USE_SYSTEM = 1;
 
-  # tarball doesn't include tests, but the upstream tests are minimal
-  doCheck = false;
+  nativeCheckInputs = [ pytestCheckHook ];
+
   pythonImportsCheck = [ "_argon2_cffi_bindings" ];
 
   meta = with lib; {
+    changelog = "https://github.com/hynek/argon2-cffi-bindings/releases/tag/${src.tag}";
     description = "Low-level CFFI bindings for Argon2";
     homepage = "https://github.com/hynek/argon2-cffi-bindings";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/argon2-cffi/default.nix b/pkgs/development/python-modules/argon2-cffi/default.nix
index 2ab26082ad16..ec4b5a4f9c37 100644
--- a/pkgs/development/python-modules/argon2-cffi/default.nix
+++ b/pkgs/development/python-modules/argon2-cffi/default.nix
@@ -12,13 +12,13 @@
 
 buildPythonPackage rec {
   pname = "argon2-cffi";
-  version = "23.1.0";
+  version = "25.1.0";
   format = "pyproject";
 
   src = fetchPypi {
     pname = "argon2_cffi";
     inherit version;
-    hash = "sha256-h5w+eaJynOdo67fTbUYJ46eKTKLsOp8SKGygV+PQ2wg=";
+    hash = "sha256-aUrlzIpC9MTivyyg5k5R4joEDGpReoUHRoPTlZ4TRsE=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/argos-translate-files/default.nix b/pkgs/development/python-modules/argos-translate-files/default.nix
index be863989ac97..933238b68cba 100644
--- a/pkgs/development/python-modules/argos-translate-files/default.nix
+++ b/pkgs/development/python-modules/argos-translate-files/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "argos-translate-files";
-  version = "1.2.0";
+  version = "1.4.0";
 
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-vIwZ2jdrBXtz6gG+Zfgqq6HVfdzmQf7nLqCDaQZT4js=";
+    hash = "sha256-vKnPL0xgyJ1vYtB2AgnKv4BqigSiFYmIm5HBq4hQ7nI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/array-api-compat/default.nix b/pkgs/development/python-modules/array-api-compat/default.nix
index e38443513a14..778fb21a861a 100644
--- a/pkgs/development/python-modules/array-api-compat/default.nix
+++ b/pkgs/development/python-modules/array-api-compat/default.nix
@@ -4,6 +4,7 @@
   fetchFromGitHub,
   pytestCheckHook,
   setuptools,
+  setuptools-scm,
   numpy,
   jaxlib,
   jax,
@@ -18,17 +19,20 @@
 
 buildPythonPackage rec {
   pname = "array-api-compat";
-  version = "1.11.2";
+  version = "1.12";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "data-apis";
     repo = "array-api-compat";
     tag = version;
-    hash = "sha256-qGf1XDhRx9hJJP0LcZF7lA8tl+LKYNCw0xTqGjsZYj8=";
+    hash = "sha256-Hb0bFjVMl4CBI3gN3abTO2QUPAOvUaFE0GdPjdops5E=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   nativeCheckInputs = [
     pytestCheckHook
diff --git a/pkgs/development/python-modules/asdf/default.nix b/pkgs/development/python-modules/asdf/default.nix
index 847b9eca0a38..d0dc783b7820 100644
--- a/pkgs/development/python-modules/asdf/default.nix
+++ b/pkgs/development/python-modules/asdf/default.nix
@@ -1,5 +1,6 @@
 {
   lib,
+  aiohttp,
   asdf-standard,
   asdf-transform-schemas,
   attrs,
@@ -16,6 +17,7 @@
   pytestCheckHook,
   pythonOlder,
   pyyaml,
+  requests,
   semantic-version,
   setuptools,
   setuptools-scm,
@@ -23,7 +25,7 @@
 
 buildPythonPackage rec {
   pname = "asdf";
-  version = "4.1.0";
+  version = "4.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -32,7 +34,7 @@ buildPythonPackage rec {
     owner = "asdf-format";
     repo = "asdf";
     tag = version;
-    hash = "sha256-h7OkLq9+sW507Va22cF0eez6xrI7iIaLV5D7EZFWxJQ=";
+    hash = "sha256-sCjDZ/6KiFH9LbdDpco8z1xRgJe0dm0HVhpRbO51RDI=";
   };
 
   build-system = [
@@ -53,11 +55,13 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    aiohttp
     fsspec
     lz4
     psutil
     pytest-remotedata
     pytestCheckHook
+    requests
   ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/astroid/default.nix b/pkgs/development/python-modules/astroid/default.nix
index 2e82ff76ea46..645fa378aea7 100644
--- a/pkgs/development/python-modules/astroid/default.nix
+++ b/pkgs/development/python-modules/astroid/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "astroid";
-  version = "3.3.10"; # Check whether the version is compatible with pylint
+  version = "3.3.11"; # Check whether the version is compatible with pylint
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "PyCQA";
     repo = "astroid";
     tag = "v${version}";
-    hash = "sha256-q4ZPXz2xaKJ39q6g1c9agktKSCfbRp+3INDfXg/wP8k=";
+    hash = "sha256-lv+BQDYP7N4UGMf7XhB6HVDORPU0kZQPYveQWOcAqfQ=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -33,6 +33,11 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html.
+    "test_identify_old_namespace_package_protocol"
+  ];
+
   disabledTestPaths = [
     # requires mypy
     "tests/test_raw_building.py"
diff --git a/pkgs/development/python-modules/astropy-iers-data/default.nix b/pkgs/development/python-modules/astropy-iers-data/default.nix
index f9a3e1f5783d..e7fd9b9ec84f 100644
--- a/pkgs/development/python-modules/astropy-iers-data/default.nix
+++ b/pkgs/development/python-modules/astropy-iers-data/default.nix
@@ -2,28 +2,25 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  pythonOlder,
-  setuptools,
-  setuptools-scm,
+  hatchling,
+  hatch-vcs,
 }:
 
 buildPythonPackage rec {
   pname = "astropy-iers-data";
-  version = "0.2025.3.31.0.36.18";
+  version = "0.2025.8.4.0.42.59";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchFromGitHub {
     owner = "astropy";
     repo = "astropy-iers-data";
     tag = "v${version}";
-    hash = "sha256-51U5QStpzTGwg1MC1NJPMnothjF3Aa7j3dxiRUfnqDE=";
+    hash = "sha256-Izqm626PZzjnMNUzPW2x15ER7fn5f9+m2X434vXV/yo=";
   };
 
   build-system = [
-    setuptools
-    setuptools-scm
+    hatchling
+    hatch-vcs
   ];
 
   pythonImportsCheck = [ "astropy_iers_data" ];
diff --git a/pkgs/development/python-modules/astropy/default.nix b/pkgs/development/python-modules/astropy/default.nix
index bb643c6742ea..d8751b9e6c7d 100644
--- a/pkgs/development/python-modules/astropy/default.nix
+++ b/pkgs/development/python-modules/astropy/default.nix
@@ -52,20 +52,16 @@
 
 buildPythonPackage rec {
   pname = "astropy";
-  version = "7.0.1";
+  version = "7.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-OS/utEOyQ3zUwuBkGmXg8VunkeFI6bHl7X3n38s45GA=";
+    hash = "sha256-yPJUMiKVsbjPJDA9bxVb9+/bbBKCiCuWbOMEDv+MU8U=";
   };
 
-  patches = [
-    ./test_z_at_value_numpyvectorize.patch
-  ];
-
   env = lib.optionalAttrs stdenv.cc.isClang {
     NIX_CFLAGS_COMPILE = "-Wno-error=unused-command-line-argument";
   };
diff --git a/pkgs/development/python-modules/astropy/test_z_at_value_numpyvectorize.patch b/pkgs/development/python-modules/astropy/test_z_at_value_numpyvectorize.patch
deleted file mode 100644
index 5ffa586d06d5..000000000000
--- a/pkgs/development/python-modules/astropy/test_z_at_value_numpyvectorize.patch
+++ /dev/null
@@ -1,33 +0,0 @@
-From 9a7f821351f0870608b2fa3e1be31bda70707913 Mon Sep 17 00:00:00 2001
-From: "P. L. Lim" <2090236+pllim@users.noreply.github.com>
-Date: Fri, 2 May 2025 13:49:06 -0400
-Subject: [PATCH] TST: xfail test_z_at_value_numpyvectorize for numpy 2.3.dev
- and later until we can fix the underlying issue
-
-Originally this is
-https://github.com/astropy/astropy/commit/9fce0d46c5e1807d7e1030c3cb0b1a9c0a359dd9
-but the path to the file has changed since the release currently in nixpkgs.
----
- astropy/cosmology/_src/tests/funcs/test_funcs.py | 4 ++++
- 1 file changed, 4 insertions(+)
-
---- a/astropy/cosmology/funcs/tests/test_funcs.py
-+++ b/astropy/cosmology/funcs/tests/test_funcs.py
-@@ -31,6 +31,7 @@
- )
- from astropy.cosmology._src.funcs.optimize import _z_at_scalar_value
- from astropy.units import allclose
-+from astropy.utils.compat import NUMPY_LT_2_3
- from astropy.utils.compat.optional_deps import HAS_SCIPY
- from astropy.utils.exceptions import AstropyUserWarning
- 
-@@ -173,6 +174,9 @@ def test_scalar_input_to_output(self):
- 
- 
- @pytest.mark.skipif(not HAS_SCIPY, reason="test requires scipy")
-+@pytest.mark.xfail(
-+    not NUMPY_LT_2_3, reason="TODO fix: https://github.com/astropy/astropy/issues/18045"
-+)
- def test_z_at_value_numpyvectorize():
-     """Test that numpy vectorize fails on Quantities.
- 
diff --git a/pkgs/development/python-modules/async-modbus/default.nix b/pkgs/development/python-modules/async-modbus/default.nix
index 83efbef9a9cb..dcc5a4247a6f 100644
--- a/pkgs/development/python-modules/async-modbus/default.nix
+++ b/pkgs/development/python-modules/async-modbus/default.nix
@@ -4,6 +4,7 @@
   connio,
   fetchFromGitHub,
   fetchpatch,
+  pytest-asyncio,
   pytest-cov-stub,
   pytestCheckHook,
   pythonOlder,
@@ -46,6 +47,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    pytest-asyncio
     pytest-cov-stub
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/asyncssh/default.nix b/pkgs/development/python-modules/asyncssh/default.nix
index adc123e7e013..76216913df50 100644
--- a/pkgs/development/python-modules/asyncssh/default.nix
+++ b/pkgs/development/python-modules/asyncssh/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "asyncssh";
-  version = "2.20.0";
+  version = "2.21.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-AgtuOEsjKO+Gg5CK2Oc96ewrm2L9lkVx6pV7uphBKYM=";
+    hash = "sha256-RQ/hO7jYao9OfXtfr853kRgco+fJLhW7xF37JYZuSLM=";
   };
 
   build-system = [ setuptools ];
@@ -81,6 +81,8 @@ buildPythonPackage rec {
     "test_connect_timeout_exceeded"
     # Fails in the sandbox
     "test_forward_remote"
+    # (2.21.0) SFTP copy ends up with an empty file
+    "test_copy_max_requests"
   ];
 
   pythonImportsCheck = [ "asyncssh" ];
diff --git a/pkgs/development/python-modules/asyncua/default.nix b/pkgs/development/python-modules/asyncua/default.nix
index 4102aa6bd30f..6e77e4b1d1b2 100644
--- a/pkgs/development/python-modules/asyncua/default.nix
+++ b/pkgs/development/python-modules/asyncua/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "asyncua";
-  version = "1.1.5";
+  version = "1.1.6";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "FreeOpcUa";
     repo = "opcua-asyncio";
     tag = "v${version}";
-    hash = "sha256-XXjzYDOEBdA4uk0VCzscHrPCY2Lgin0JBAVDdxmSOio=";
+    hash = "sha256-GxjEbzPvley0EL7xuZWr1jzR9Lpui1fVL2FOWnRL34Q=";
     fetchSubmodules = true;
   };
 
@@ -83,7 +83,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "OPC UA / IEC 62541 Client and Server for Python";
     homepage = "https://github.com/FreeOpcUa/opcua-asyncio";
-    changelog = "https://github.com/FreeOpcUa/opcua-asyncio/releases/tag/v${version}";
+    changelog = "https://github.com/FreeOpcUa/opcua-asyncio/releases/tag/${src.tag}";
     license = licenses.lgpl3Plus;
     maintainers = with maintainers; [ harvidsen ];
   };
diff --git a/pkgs/development/python-modules/atopile/default.nix b/pkgs/development/python-modules/atopile/default.nix
index 8f43b9091078..66fc8d1b4e88 100644
--- a/pkgs/development/python-modules/atopile/default.nix
+++ b/pkgs/development/python-modules/atopile/default.nix
@@ -47,14 +47,14 @@
 
 buildPythonPackage rec {
   pname = "atopile";
-  version = "0.2.69";
+  version = "0.11.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "atopile";
     repo = "atopile";
     tag = "v${version}";
-    hash = "sha256-mQYnaWch0lVzz1hV6WboYxBGe3ruw+mK2AwMx13DQJM=";
+    hash = "sha256-rf8dWeZYnL0Ce4TDEyediYN+jc+StsGZrpp9OohSz8g=";
   };
 
   build-system = [
@@ -118,7 +118,7 @@ buildPythonPackage rec {
     description = "Design circuit boards with code";
     homepage = "https://aiopg.readthedocs.io/";
     downloadPage = "https://github.com/atopile/atopile";
-    changelog = "https://github.com/atopile/atopile/releases/tag/${src.rev}";
+    changelog = "https://github.com/atopile/atopile/releases/tag/${src.tag}";
     license = with lib.licenses; [ mit ];
     maintainers = with lib.maintainers; [ sigmanificient ];
     mainProgram = "ato";
diff --git a/pkgs/development/python-modules/audioop-lts/default.nix b/pkgs/development/python-modules/audioop-lts/default.nix
index 63db1dbfc60b..726ceca435c0 100644
--- a/pkgs/development/python-modules/audioop-lts/default.nix
+++ b/pkgs/development/python-modules/audioop-lts/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "audioop-lts";
-  version = "0.2.1";
+  version = "0.2.2";
   pyproject = true;
 
   disabled = pythonOlder "3.13";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "AbstractUmbra";
     repo = "audioop";
     tag = version;
-    hash = "sha256-tx5/dcyEfHlYRohfYW/t0UkLiZ9LJHmI8g3sC3+DGAE=";
+    hash = "sha256-C1z24kH5t0RSVqjT8SBdrilMtVs7pTI1vd+iwMk3RXE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/autobahn/default.nix b/pkgs/development/python-modules/autobahn/default.nix
index 18a6d7c98494..403bf76705e1 100644
--- a/pkgs/development/python-modules/autobahn/default.nix
+++ b/pkgs/development/python-modules/autobahn/default.nix
@@ -18,7 +18,7 @@
   pygobject3,
   pyopenssl,
   qrcode,
-  pytest-asyncio,
+  pytest-asyncio_0,
   python-snappy,
   pytestCheckHook,
   pythonOlder,
@@ -35,8 +35,6 @@ buildPythonPackage rec {
   version = "24.4.2";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchFromGitHub {
     owner = "crossbario";
     repo = "autobahn-python";
@@ -63,7 +61,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     mock
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ]
   ++ optional-dependencies.scram
diff --git a/pkgs/development/python-modules/automat/default.nix b/pkgs/development/python-modules/automat/default.nix
index 76bfc2a42dd4..878c37ee0398 100644
--- a/pkgs/development/python-modules/automat/default.nix
+++ b/pkgs/development/python-modules/automat/default.nix
@@ -2,29 +2,26 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  attrs,
+  hatch-vcs,
   pytest-benchmark,
   pytestCheckHook,
-  setuptools-scm,
-  six,
+  setuptools,
 }:
 
 let
   automat = buildPythonPackage rec {
-    version = "24.8.1";
+    version = "25.4.16";
     format = "pyproject";
     pname = "automat";
 
     src = fetchPypi {
       inherit pname version;
-      hash = "sha256-s0Inz2P2MluK0jme3ngGdQg+Q5sgwyPTdjc9juYwbYg=";
+      hash = "sha256-ABdZGlR3Bm6Q0msOaW3cFDuq/Ye1iM+sgQC8a+ljTeA=";
     };
 
-    nativeBuildInputs = [ setuptools-scm ];
-
-    propagatedBuildInputs = [
-      six
-      attrs
+    build-system = [
+      setuptools
+      hatch-vcs
     ];
 
     nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/avidtools/default.nix b/pkgs/development/python-modules/avidtools/default.nix
index 3b58583c4fd2..0326b2add22d 100644
--- a/pkgs/development/python-modules/avidtools/default.nix
+++ b/pkgs/development/python-modules/avidtools/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "avidtools";
-  version = "0.1.2";
+  version = "0.2.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2YtX+kUryTwaQ4QvExw5OJ4Rx8JoTzBeC8VSyNEL7OY=";
+    hash = "sha256-rYkA/+YfFhrS/WSx+jUWCsXDjp03aMoMiGdXeK3Kf4M=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/awesomeversion/default.nix b/pkgs/development/python-modules/awesomeversion/default.nix
index 001ddf58a9a1..70e9f56b430e 100644
--- a/pkgs/development/python-modules/awesomeversion/default.nix
+++ b/pkgs/development/python-modules/awesomeversion/default.nix
@@ -3,14 +3,15 @@
   buildPythonPackage,
   fetchFromGitHub,
   pythonOlder,
-  poetry-core,
+  hatchling,
+  pytest-codspeed,
   pytest-snapshot,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "awesomeversion";
-  version = "24.6.0";
+  version = "25.8.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +20,7 @@ buildPythonPackage rec {
     owner = "ludeeus";
     repo = "awesomeversion";
     tag = version;
-    hash = "sha256-lpG42Be0MVinWX5MyDvBPdoZFx66l6tpUxpAJRqEf88=";
+    hash = "sha256-2CEuJagUkYwtjzpQLYLlz+V5e2feEU6di3wI0+uWuy4=";
   };
 
   postPatch = ''
@@ -28,11 +29,12 @@ buildPythonPackage rec {
       --replace-fail 'version = "0"' 'version = "${version}"'
   '';
 
-  nativeBuildInputs = [ poetry-core ];
+  nativeBuildInputs = [ hatchling ];
 
   pythonImportsCheck = [ "awesomeversion" ];
 
   nativeCheckInputs = [
+    pytest-codspeed
     pytest-snapshot
     pytestCheckHook
   ];
@@ -40,7 +42,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python module to deal with versions";
     homepage = "https://github.com/ludeeus/awesomeversion";
-    changelog = "https://github.com/ludeeus/awesomeversion/releases/tag/${version}";
+    changelog = "https://github.com/ludeeus/awesomeversion/releases/tag/${src.tag}";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/aws-adfs/default.nix b/pkgs/development/python-modules/aws-adfs/default.nix
index ea09c20e51c0..810714b0eba1 100644
--- a/pkgs/development/python-modules/aws-adfs/default.nix
+++ b/pkgs/development/python-modules/aws-adfs/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "aws-adfs";
-  version = "2.11.2";
+  version = "2.12.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "venth";
     repo = "aws-adfs";
     tag = "v${version}";
-    hash = "sha256-ZzQ92VBa8CApd0WkfPrUZsEZICK2fhwmt45P2sx2mK0=";
+    hash = "sha256-TYfKeLe1zp6d5/JPURAcCAfjtaiWHkkmP1+zE+PiiR4=";
   };
 
   build-system = [
@@ -66,7 +66,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Command line tool to ease AWS CLI authentication against ADFS";
     homepage = "https://github.com/venth/aws-adfs";
-    changelog = "https://github.com/venth/aws-adfs/releases/tag/v${version}";
+    changelog = "https://github.com/venth/aws-adfs/releases/tag/${src.tag}";
     license = licenses.psfl;
     maintainers = with maintainers; [ bhipple ];
     mainProgram = "aws-adfs";
diff --git a/pkgs/development/python-modules/aws-encryption-sdk/default.nix b/pkgs/development/python-modules/aws-encryption-sdk/default.nix
index 178aa2a7d50e..bdfe21d15840 100644
--- a/pkgs/development/python-modules/aws-encryption-sdk/default.nix
+++ b/pkgs/development/python-modules/aws-encryption-sdk/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "aws-encryption-sdk";
-  version = "4.0.1";
+  version = "4.0.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-cyDcTPjY1am0yIo0O+k4NdoYdW4FMI01NlVL4MooiaU=";
+    hash = "sha256-kRqQCYBzLlCbhuBEP+O9zuSAdgpGDg9wLzYFZaIPOIg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/aws-lambda-builders/default.nix b/pkgs/development/python-modules/aws-lambda-builders/default.nix
index 3f49679b12ae..8f28fc43296b 100644
--- a/pkgs/development/python-modules/aws-lambda-builders/default.nix
+++ b/pkgs/development/python-modules/aws-lambda-builders/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "aws-lambda-builders";
-  version = "1.53.0";
+  version = "1.56.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "awslabs";
     repo = "aws-lambda-builders";
     tag = "v${version}";
-    hash = "sha256-4OiXri1u4co1cuDm7bLyw8XfMg2S3sKrkPWF2tD8zg8=";
+    hash = "sha256-7fXuDR5AYAtnJapTTJ1QE45aP2l80ao/8RFwM7bgA4w=";
   };
 
   postPatch = ''
@@ -76,7 +76,7 @@ buildPythonPackage rec {
     description = "Tool to compile, build and package AWS Lambda functions";
     mainProgram = "lambda-builders";
     homepage = "https://github.com/awslabs/aws-lambda-builders";
-    changelog = "https://github.com/aws/aws-lambda-builders/releases/tag/v${version}";
+    changelog = "https://github.com/aws/aws-lambda-builders/releases/tag/${src.tag}";
     longDescription = ''
       Lambda Builders is a Python library to compile, build and package
       AWS Lambda functions for several runtimes & frameworks.
diff --git a/pkgs/development/python-modules/aws-sam-translator/default.nix b/pkgs/development/python-modules/aws-sam-translator/default.nix
index e9e46a05b4f0..c9ba2878ef13 100644
--- a/pkgs/development/python-modules/aws-sam-translator/default.nix
+++ b/pkgs/development/python-modules/aws-sam-translator/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "aws-sam-translator";
-  version = "1.98.0";
+  version = "1.99.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "aws";
     repo = "serverless-application-model";
     tag = "v${version}";
-    hash = "sha256-OfWH1V+F90ukVgan+eZKo00hrOMf/6x6HqxARzFiKHI=";
+    hash = "sha256-Y82qN2bmzE5Xqz2wSw9lWItsPbsRevLL7FlLN0FGKs0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/aws-xray-sdk/default.nix b/pkgs/development/python-modules/aws-xray-sdk/default.nix
index 4b509361fb92..ee6ad97f7207 100644
--- a/pkgs/development/python-modules/aws-xray-sdk/default.nix
+++ b/pkgs/development/python-modules/aws-xray-sdk/default.nix
@@ -10,7 +10,7 @@
   importlib-metadata,
   jsonpickle,
   pymysql,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pynamodb,
   pytestCheckHook,
   pythonOlder,
@@ -52,7 +52,7 @@ buildPythonPackage rec {
     httpx
     pymysql
     pynamodb
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
     sqlalchemy
     webtest
@@ -64,6 +64,8 @@ buildPythonPackage rec {
     # We don't care about benchmarks
     "tests/test_local_sampling_benchmark.py"
     "tests/test_patcher.py"
+    # async def functions are not natively supported.
+    "tests/test_async_recorder.py"
   ];
 
   pythonImportsCheck = [ "aws_xray_sdk" ];
diff --git a/pkgs/development/python-modules/awsiotpythonsdk/default.nix b/pkgs/development/python-modules/awsiotpythonsdk/default.nix
index 486cfcc86d22..151dabb399cd 100644
--- a/pkgs/development/python-modules/awsiotpythonsdk/default.nix
+++ b/pkgs/development/python-modules/awsiotpythonsdk/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "awsiotpythonsdk";
-  version = "1.5.4";
+  version = "1.5.5";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "aws";
     repo = "aws-iot-device-sdk-python";
     tag = "v${version}";
-    hash = "sha256-TUNIWGal7NQy2qmHVTiw6eX4t/Yt3NnM3HHztBwMfoM=";
+    hash = "sha256-mgf2hb7dWOGzaHnOQDz7GJeQV3Pa0X56X8nC15Tq0dY=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -30,7 +30,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python SDK for connecting to AWS IoT";
     homepage = "https://github.com/aws/aws-iot-device-sdk-python";
-    changelog = "https://github.com/aws/aws-iot-device-sdk-python/releases/tag/v${version}";
+    changelog = "https://github.com/aws/aws-iot-device-sdk-python/releases/tag/${src.tag}";
     license = with licenses; [ asl20 ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/awswrangler/default.nix b/pkgs/development/python-modules/awswrangler/default.nix
index 260bf04247f7..ef33e99adc91 100644
--- a/pkgs/development/python-modules/awswrangler/default.nix
+++ b/pkgs/development/python-modules/awswrangler/default.nix
@@ -26,7 +26,7 @@
 
 buildPythonPackage rec {
   pname = "awswrangler";
-  version = "3.12.0";
+  version = "3.12.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -35,7 +35,7 @@ buildPythonPackage rec {
     owner = "aws";
     repo = "aws-sdk-pandas";
     tag = version;
-    hash = "sha256-BudK7pP7b8YJRyDCQAZv8FtxF5paA+AR/ZBt9UO3XjM=";
+    hash = "sha256-N4IqeAfW4PqgQcBFaFK/Ugbcsz8pLiFzkBr9SRm7AOs=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/axisregistry/default.nix b/pkgs/development/python-modules/axisregistry/default.nix
index fe5efc40c7fe..e9cb74745b95 100644
--- a/pkgs/development/python-modules/axisregistry/default.nix
+++ b/pkgs/development/python-modules/axisregistry/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "axisregistry";
-  version = "0.4.12";
+  version = "0.4.16";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-d60VbzlDiAL+J8sCE0sp2RgB02WGrigqcdzqW55ex1s=";
+    hash = "sha256-eohwtlFSTuttPv0PsOy1uezGT1NNlwm8ZunVJd1a9zo=";
   };
 
   # Relax the dependency on protobuf 3. Other packages in the Google Fonts
diff --git a/pkgs/development/python-modules/azure-ai-vision-imageanalysis/default.nix b/pkgs/development/python-modules/azure-ai-vision-imageanalysis/default.nix
index fe71a257941b..fd508eb915fa 100644
--- a/pkgs/development/python-modules/azure-ai-vision-imageanalysis/default.nix
+++ b/pkgs/development/python-modules/azure-ai-vision-imageanalysis/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "azure-ai-vision-imageanalysis";
-  version = "1.0.0b3";
+  version = "39.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Azure";
     repo = "azure-sdk-for-python";
-    tag = "azure-ai-vision-imageanalysis_${version}";
-    hash = "sha256-Hkj9mrjCc8Li8z6e1BjpzANRVx6+DjN0MhTLANMT78E=";
+    tag = "azure-mgmt-containerservice_${version}";
+    hash = "sha256-zufXc8LR4STHi/jjV0bcLsifcHIif2m+3Q/KZlsSkRw=";
   };
 
   sourceRoot = "${src.name}/sdk/vision/azure-ai-vision-imageanalysis";
diff --git a/pkgs/development/python-modules/azure-core/default.nix b/pkgs/development/python-modules/azure-core/default.nix
index 6bcdd65876ef..4f4e81311ed0 100644
--- a/pkgs/development/python-modules/azure-core/default.nix
+++ b/pkgs/development/python-modules/azure-core/default.nix
@@ -8,6 +8,10 @@
   aiohttp,
   flask,
   mock,
+  opentelemetry-api,
+  opentelemetry-instrumentation,
+  opentelemetry-instrumentation-requests,
+  opentelemetry-sdk,
   pytest,
   pytest-asyncio,
   pytest-trio,
@@ -20,7 +24,7 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.32.0";
+  version = "1.35.0";
   pname = "azure-core";
   pyproject = true;
 
@@ -31,12 +35,12 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_core";
     inherit version;
-    hash = "sha256-IrPDXWstrhSZD2wb4pEr8j/+ULIg5wiiirG7krHHMOU=";
+    hash = "sha256-wL5ShIlIXp7eWbaXHrY8HqrPg+9TABv+OQTkdelyvlw=";
   };
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [ setuptools ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     requests
     six
     typing-extensions
@@ -44,12 +48,16 @@ buildPythonPackage rec {
 
   optional-dependencies = {
     aio = [ aiohttp ];
+    tracing = [ opentelemetry-api ];
   };
 
   nativeCheckInputs = [
     aiodns
     flask
     mock
+    opentelemetry-instrumentation
+    opentelemetry-instrumentation-requests
+    opentelemetry-sdk
     pytest
     pytest-trio
     pytest-asyncio
@@ -95,6 +103,10 @@ buildPythonPackage rec {
     "tests/test_polling.py"
     "tests/async_tests/test_base_polling_async.py"
     "tests/async_tests/test_polling_async.py"
+    # infinite recursion with azure-storage-blob
+    "tests/async_tests/test_tracing_live_async.py"
+    "tests/test_serialization.py"
+    "tests/test_tracing_live.py"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/azure-datalake-store/default.nix b/pkgs/development/python-modules/azure-datalake-store/default.nix
index 1552f1c4b75d..2491d213be6a 100644
--- a/pkgs/development/python-modules/azure-datalake-store/default.nix
+++ b/pkgs/development/python-modules/azure-datalake-store/default.nix
@@ -11,14 +11,15 @@
 
 buildPythonPackage rec {
   pname = "azure-datalake-store";
-  version = "0.0.53";
+  version = "1.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-BbbeYu4/KgpuaUHmkzt5K4AMPn9v/OL8MkvBmHV1c5M=";
+    pname = "azure_datalake_store";
+    inherit version;
+    hash = "sha256-U2TURFqrFUocfLECFWKcPORs5ceqrxYHGJDAP65ToDU=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-eventhub/default.nix b/pkgs/development/python-modules/azure-eventhub/default.nix
index 1cfda2439a9e..814fc18681a1 100644
--- a/pkgs/development/python-modules/azure-eventhub/default.nix
+++ b/pkgs/development/python-modules/azure-eventhub/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "azure-eventhub";
-  version = "5.15.0";
+  version = "39.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Azure";
     repo = "azure-sdk-for-python";
-    tag = "azure-eventhub_${version}";
-    hash = "sha256-zpj1DUeFCXgVw44LcBCYtuFcQtA9BnrDKAxKSYzu4ts=";
+    tag = "azure-mgmt-containerservice_${version}";
+    hash = "sha256-zufXc8LR4STHi/jjV0bcLsifcHIif2m+3Q/KZlsSkRw=";
   };
 
   sourceRoot = "${src.name}/sdk/eventhub/azure-eventhub";
diff --git a/pkgs/development/python-modules/azure-identity/default.nix b/pkgs/development/python-modules/azure-identity/default.nix
index 0844690094f9..ef5a195b1356 100644
--- a/pkgs/development/python-modules/azure-identity/default.nix
+++ b/pkgs/development/python-modules/azure-identity/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "azure-identity";
-  version = "1.21.0";
+  version = "1.23.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_identity";
     inherit version;
-    hash = "sha256-6iLObmsPQpvBuNkhLVufmHe9TILxckv6kQdgYSwHqaY=";
+    hash = "sha256-Imwe+YKp+NXc9uD57TXq7ypNlx592GMX6bnVLnCgNeQ=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-keyvault-keys/default.nix b/pkgs/development/python-modules/azure-keyvault-keys/default.nix
index 3e53dd4ce7df..21cb1fa32c4d 100644
--- a/pkgs/development/python-modules/azure-keyvault-keys/default.nix
+++ b/pkgs/development/python-modules/azure-keyvault-keys/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "azure-keyvault-keys";
-  version = "4.10.0";
+  version = "4.11.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_keyvault_keys";
     inherit version;
-    hash = "sha256-URIGrpCuwXJqTW/1qS11S9DA8eh1GJE2jTD7cLYpVfE=";
+    hash = "sha256-8lexkXosOoiYPj9WdaZBlEnrJiMYiI1bUeHLO+15d5o=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-kusto-data/default.nix b/pkgs/development/python-modules/azure-kusto-data/default.nix
index 9ef5b0b7d97c..5fa85ce9827d 100644
--- a/pkgs/development/python-modules/azure-kusto-data/default.nix
+++ b/pkgs/development/python-modules/azure-kusto-data/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "azure-kusto-data";
-  version = "4.6.3";
+  version = "5.0.5";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "Azure";
     repo = "azure-kusto-python";
     tag = "v${version}";
-    hash = "sha256-VndOEvSi4OMf/yAjNl34X9IFF0T+wNfjlPW8NfdrwUo=";
+    hash = "sha256-DEHTxSvc6AeBMEJuAiDavFj2xVfPmWKpZBaZcpHWHak=";
   };
 
   sourceRoot = "${src.name}/${pname}";
diff --git a/pkgs/development/python-modules/azure-kusto-ingest/default.nix b/pkgs/development/python-modules/azure-kusto-ingest/default.nix
index b9aa9fac7f94..c59e9a57eb39 100644
--- a/pkgs/development/python-modules/azure-kusto-ingest/default.nix
+++ b/pkgs/development/python-modules/azure-kusto-ingest/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "azure-kusto-ingest";
-  version = "4.6.3";
+  version = "5.0.5";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "Azure";
     repo = "azure-kusto-python";
     tag = "v${version}";
-    hash = "sha256-VndOEvSi4OMf/yAjNl34X9IFF0T+wNfjlPW8NfdrwUo=";
+    hash = "sha256-DEHTxSvc6AeBMEJuAiDavFj2xVfPmWKpZBaZcpHWHak=";
   };
 
   sourceRoot = "${src.name}/${pname}";
@@ -40,6 +40,11 @@ buildPythonPackage rec {
     tenacity
   ];
 
+  pythonRelaxDeps = [
+    "azure-storage-blob"
+    "azure-storage-queue"
+  ];
+
   optional-dependencies = {
     pandas = [ pandas ];
   };
diff --git a/pkgs/development/python-modules/azure-mgmt-containerservice/default.nix b/pkgs/development/python-modules/azure-mgmt-containerservice/default.nix
index cab199d3eaa4..a9466082adce 100644
--- a/pkgs/development/python-modules/azure-mgmt-containerservice/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-containerservice/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-containerservice";
-  version = "37.0.0";
+  version = "39.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_mgmt_containerservice";
     inherit version;
-    hash = "sha256-F02cVmGhYuxDoK95BbzxHNIJpugARaj0I31TcB0qkTs=";
+    hash = "sha256-qgAWke3WPQc3S1gggcC7IMi+b/uIWlkqFXfSH0EYqDc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-mgmt-core/default.nix b/pkgs/development/python-modules/azure-mgmt-core/default.nix
index d69683337d22..e9e2eb34c9c2 100644
--- a/pkgs/development/python-modules/azure-mgmt-core/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-core/default.nix
@@ -7,7 +7,7 @@
 }:
 
 buildPythonPackage rec {
-  version = "1.5.0";
+  version = "1.6.0";
   format = "setuptools";
   pname = "azure-mgmt-core";
 
@@ -15,7 +15,7 @@ buildPythonPackage rec {
     pname = "azure_mgmt_core";
     inherit version;
     extension = "tar.gz";
-    hash = "sha256-OArj36Njn0pcJGp9t+0tCDdOiCMP0No+uJn3wR5cRBo=";
+    hash = "sha256-smIyr4V7Ah5h2BPZ9K5TBGUlXLELPd6UWtN0P3pY55w=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/azure-mgmt-iothub/default.nix b/pkgs/development/python-modules/azure-mgmt-iothub/default.nix
index fee59741d9d1..f4d17304e312 100644
--- a/pkgs/development/python-modules/azure-mgmt-iothub/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-iothub/default.nix
@@ -5,28 +5,27 @@
   buildPythonPackage,
   fetchPypi,
   isodate,
-  pythonOlder,
-  typing-extensions,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "azure-mgmt-iothub";
-  version = "3.0.0";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "4.0.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-2vIfyYxoo1PsYWMYwOYr4EyNaJmWC+jCy/mRZzrItyI=";
+    pname = "azure_mgmt_iothub";
+    inherit version;
+    hash = "sha256-B/Jb1vZzdLqxfMEZL5+SGzUONWAlHxkGnmZlg1Qe1Ng=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     azure-common
     azure-mgmt-core
     isodate
-  ]
-  ++ lib.optionals (pythonOlder "3.8") [ typing-extensions ];
+  ];
 
   # Module has no tests
   doCheck = false;
diff --git a/pkgs/development/python-modules/azure-mgmt-keyvault/default.nix b/pkgs/development/python-modules/azure-mgmt-keyvault/default.nix
index eeaeb6fb85b3..e26a0010caf7 100644
--- a/pkgs/development/python-modules/azure-mgmt-keyvault/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-keyvault/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-keyvault";
-  version = "11.0.0";
+  version = "12.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_mgmt_keyvault";
     inherit version;
-    hash = "sha256-/PsTZoUpJvKjEeG8bmp4brioof1G5gJdTBFO3iy0ZC4=";
+    hash = "sha256-4s8Y6KSSi10cqxJ75C6prQJG1ofKEvwnoq1mSHzhyGs=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-mgmt-monitor/default.nix b/pkgs/development/python-modules/azure-mgmt-monitor/default.nix
index 6ce2643655de..575ccb77b587 100644
--- a/pkgs/development/python-modules/azure-mgmt-monitor/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-monitor/default.nix
@@ -5,28 +5,27 @@
   buildPythonPackage,
   fetchPypi,
   isodate,
-  pythonOlder,
-  typing-extensions,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "azure-mgmt-monitor";
-  version = "6.0.2";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "7.0.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-X/v1AOSZq3kSsbptJs7yZIDZrkEVMgGbt41yViGW4Hs=";
+    pname = "azure_mgmt_monitor";
+    inherit version;
+    hash = "sha256-t19TZEHUMPaf+HOhZG5fXbyzCAoQdopZ0K3AFUFiOBY=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     isodate
     azure-common
     azure-mgmt-core
-  ]
-  ++ lib.optionals (pythonOlder "3.8") [ typing-extensions ];
+  ];
 
   pythonNamespaces = [ "azure.mgmt" ];
 
diff --git a/pkgs/development/python-modules/azure-mgmt-recoveryservices/default.nix b/pkgs/development/python-modules/azure-mgmt-recoveryservices/default.nix
index 314938116ddc..d4028f823225 100644
--- a/pkgs/development/python-modules/azure-mgmt-recoveryservices/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-recoveryservices/default.nix
@@ -5,28 +5,27 @@
   buildPythonPackage,
   fetchPypi,
   isodate,
-  pythonOlder,
-  typing-extensions,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "azure-mgmt-recoveryservices";
-  version = "3.0.0";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "3.1.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-3yEt+t+8xlnDEjHD4XCqt8IRRNFysPiCaKsPWtjpWII=";
+    pname = "azure_mgmt_recoveryservices";
+    inherit version;
+    hash = "sha256-fy25hAFwjPFFMi9QvEkcr3lnvsSvO/ewmEufB9MJJoc=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     azure-common
     azure-mgmt-core
     isodate
-  ]
-  ++ lib.optionals (pythonOlder "3.8") [ typing-extensions ];
+  ];
 
   # Module has no tests
   doCheck = false;
diff --git a/pkgs/development/python-modules/azure-mgmt-resource/default.nix b/pkgs/development/python-modules/azure-mgmt-resource/default.nix
index d865e6ecf0c8..17e7eb95c2c7 100644
--- a/pkgs/development/python-modules/azure-mgmt-resource/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-resource/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-resource";
-  version = "23.4.0";
+  version = "24.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_mgmt_resource";
     inherit version;
-    hash = "sha256-fMCQkYS9AUOeJF9fLiCUWjZo1FpndOHwCCJ7szpzPRY=";
+    hash = "sha256-z2uJlfzdQHrJ/x3UdAhxKUKaHZDbsax3+XwZuWI3smU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-mgmt-search/default.nix b/pkgs/development/python-modules/azure-mgmt-search/default.nix
index 7a8b87c32bb6..b877e2995618 100644
--- a/pkgs/development/python-modules/azure-mgmt-search/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-search/default.nix
@@ -5,28 +5,27 @@
   buildPythonPackage,
   fetchPypi,
   isodate,
-  pythonOlder,
-  typing-extensions,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "azure-mgmt-search";
-  version = "9.1.0";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "9.2.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-U7xu6tsJdNIfEguyG7Xmgn321lDhc0dGD9g+LWiINZk=";
+    pname = "azure_mgmt_search";
+    inherit version;
+    hash = "sha256-oNoOwzLR9D0PastjuM/YAIWwdeka/PgS+MdprZ/crYQ=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     azure-common
     azure-mgmt-core
     isodate
-  ]
-  ++ lib.optionals (pythonOlder "3.8") [ typing-extensions ];
+  ];
 
   # Module has no tests
   doCheck = false;
diff --git a/pkgs/development/python-modules/azure-monitor-ingestion/default.nix b/pkgs/development/python-modules/azure-monitor-ingestion/default.nix
index e77ae5df94d3..e7ab2783c853 100644
--- a/pkgs/development/python-modules/azure-monitor-ingestion/default.nix
+++ b/pkgs/development/python-modules/azure-monitor-ingestion/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "azure-monitor-ingestion";
-  version = "1.0.4";
+  version = "1.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-JU11mTof5wfRmPAUrvWhT6pXDO5zabNbsDriqo+Zvnk=";
+    hash = "sha256-l6/ueA2a4waRKM3ncCfUzGL6gk/mTVusiArEpksKDE4=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-multiapi-storage/default.nix b/pkgs/development/python-modules/azure-multiapi-storage/default.nix
index 57ddf17de1ab..5482d0817956 100644
--- a/pkgs/development/python-modules/azure-multiapi-storage/default.nix
+++ b/pkgs/development/python-modules/azure-multiapi-storage/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "azure-multiapi-storage";
-  version = "1.4.1";
+  version = "1.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_multiapi_storage";
     inherit version;
-    hash = "sha256-INTvVn+1ysQHKRyI0Q4p43Ynyyj2BiBPVMcfaAEDCyg=";
+    hash = "sha256-g/5BOsU3OzvpxMnySPVNoaXLrmwjb8aq3hetC/jsEWY=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-storage-blob/default.nix b/pkgs/development/python-modules/azure-storage-blob/default.nix
index abe4710cf0c9..491f35a9c797 100644
--- a/pkgs/development/python-modules/azure-storage-blob/default.nix
+++ b/pkgs/development/python-modules/azure-storage-blob/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "azure-storage-blob";
-  version = "12.25.1";
+  version = "12.26.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_storage_blob";
     inherit version;
-    hash = "sha256-TylN3JvEeQmsZriTS9JrUNIAAnixCtgswQl2T9xuDjs=";
+    hash = "sha256-XdfXgkIk994Av+sDJ1NgHJgmVRcwYeJC8Tvm4m141x8=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-storage-file-share/default.nix b/pkgs/development/python-modules/azure-storage-file-share/default.nix
index 2fa9f218cced..0c9b0fc40afe 100644
--- a/pkgs/development/python-modules/azure-storage-file-share/default.nix
+++ b/pkgs/development/python-modules/azure-storage-file-share/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "azure-storage-file-share";
-  version = "12.21.0";
+  version = "12.22.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_storage_file_share";
     inherit version;
-    hash = "sha256-20K/a0OzwMJ8kVIgKVUnffwmpZ9/rSbAWEMaaumVgM4=";
+    hash = "sha256-5YPI4IbufW7FDMI9r0KDnBjc4Rs2s9E2TBNxTAi1NFI=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/azure-storage-queue/default.nix b/pkgs/development/python-modules/azure-storage-queue/default.nix
index dbeb4286bbfe..8e0814f06fa5 100644
--- a/pkgs/development/python-modules/azure-storage-queue/default.nix
+++ b/pkgs/development/python-modules/azure-storage-queue/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "azure-storage-queue";
-  version = "12.12.0";
+  version = "12.13.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "azure_storage_queue";
     inherit version;
-    hash = "sha256-uvLxvIK31PUpGSLD6k8jziJD6ULb50lPyheCKQs38eQ=";
+    hash = "sha256-JWkeeVjSSXA5JFETTfpUdjf9Lfz95bNHai4VLlaXP4w=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/backoff/default.nix b/pkgs/development/python-modules/backoff/default.nix
index a068a640914b..1d7cb898d244 100644
--- a/pkgs/development/python-modules/backoff/default.nix
+++ b/pkgs/development/python-modules/backoff/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   poetry-core,
   pytestCheckHook,
-  pytest-asyncio,
+  pytest-asyncio_0,
   responses,
 }:
 
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   nativeBuildInputs = [ poetry-core ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
     responses
   ];
diff --git a/pkgs/development/python-modules/backrefs/default.nix b/pkgs/development/python-modules/backrefs/default.nix
index 2446f8379b04..41d43f18495c 100644
--- a/pkgs/development/python-modules/backrefs/default.nix
+++ b/pkgs/development/python-modules/backrefs/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "backrefs";
-  version = "5.9";
+  version = "6.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "facelessuser";
     repo = "backrefs";
     tag = version;
-    hash = "sha256-W75JLoBn990PoO3Ej3nb3BjOGm0c71o8hDDBUFWr8i4=";
+    hash = "sha256-7kB8z8pNU6eLuz4eSYXkSDL5npowlYsm0hjjh8zcAK0=";
   };
 
   build-system = [
@@ -33,7 +33,7 @@ buildPythonPackage rec {
   meta = {
     description = "Wrapper around re or regex that adds additional back references";
     homepage = "https://github.com/facelessuser/backrefs";
-    changelog = "https://github.com/facelessuser/backrefs/releases/tag/${version}";
+    changelog = "https://github.com/facelessuser/backrefs/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ drupol ];
   };
diff --git a/pkgs/development/python-modules/badsecrets/default.nix b/pkgs/development/python-modules/badsecrets/default.nix
index e0c169e58b0e..08972bff8e4d 100644
--- a/pkgs/development/python-modules/badsecrets/default.nix
+++ b/pkgs/development/python-modules/badsecrets/default.nix
@@ -40,6 +40,8 @@ buildPythonPackage rec {
     viewstate
   ];
 
+  pythonRelaxDeps = [ "viewstate" ];
+
   pythonImportsCheck = [ "badsecrets" ];
 
   meta = {
diff --git a/pkgs/development/python-modules/bandit/default.nix b/pkgs/development/python-modules/bandit/default.nix
index 983ef8fba2e7..ea061336c5dc 100644
--- a/pkgs/development/python-modules/bandit/default.nix
+++ b/pkgs/development/python-modules/bandit/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "bandit";
-  version = "1.8.5";
+  version = "1.8.6";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-24EunDm4howP7VJ4t3//u6uoKLSJG8gONLnFA3MgHP0=";
+    hash = "sha256-2/6cJfxpYcIHhZPeVf0Z8lWfnkW5nxJyNB9bld6k5Ws=";
   };
 
   nativeBuildInputs = [ pbr ];
diff --git a/pkgs/development/python-modules/basemap/default.nix b/pkgs/development/python-modules/basemap/default.nix
index 0551f450c4e7..415b6addd73b 100644
--- a/pkgs/development/python-modules/basemap/default.nix
+++ b/pkgs/development/python-modules/basemap/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "basemap";
-  version = "1.4.1";
+  version = "2.0.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "matplotlib";
     repo = "basemap";
     tag = "v${version}";
-    hash = "sha256-0rTGsphwLy2yGvhO7bcmFqdgysIXXkDBmURwRVw3ZHY=";
+    hash = "sha256-1T1FTcR99KbpqiYzrd2r5h1wTcygBEU7BLZXZ8uMthU=";
   };
 
   sourceRoot = "${src.name}/packages/basemap";
diff --git a/pkgs/development/python-modules/basswood-av/default.nix b/pkgs/development/python-modules/basswood-av/default.nix
index 2d9f44b5b5be..e6588b8962cd 100644
--- a/pkgs/development/python-modules/basswood-av/default.nix
+++ b/pkgs/development/python-modules/basswood-av/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   setuptools,
   pkg-config,
-  cython_3_1,
+  cython,
   ffmpeg,
 }:
 
@@ -22,7 +22,7 @@ buildPythonPackage rec {
 
   build-system = [
     setuptools
-    cython_3_1
+    cython
   ];
 
   nativeBuildInputs = [ pkg-config ];
diff --git a/pkgs/development/python-modules/bayesian-optimization/default.nix b/pkgs/development/python-modules/bayesian-optimization/default.nix
index 22fc9d78767c..0de71843bf96 100644
--- a/pkgs/development/python-modules/bayesian-optimization/default.nix
+++ b/pkgs/development/python-modules/bayesian-optimization/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "bayesian-optimization";
-  version = "3.0.1";
+  version = "3.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "bayesian-optimization";
     repo = "BayesianOptimization";
     tag = "v${version}";
-    hash = "sha256-dq5R0/gqjSzQPAmYvtByJ6gT8pOiXcezfYlKpFLnryk=";
+    hash = "sha256-CYkFobGLlh5cPLwChRWXCow0d5uz8eN5hcRanNMfW8s=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/bc-python-hcl2/default.nix b/pkgs/development/python-modules/bc-python-hcl2/default.nix
index 506352b25d32..e253b4a1911e 100644
--- a/pkgs/development/python-modules/bc-python-hcl2/default.nix
+++ b/pkgs/development/python-modules/bc-python-hcl2/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "bc-python-hcl2";
-  version = "0.4.2";
+  version = "0.4.3";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-rI/1n7m9Q36im4mn18UH/QoelXhFuumurGnyiSuNaB4=";
+    hash = "sha256-+uYrKkGmda0zDRNNgldlJtt1X3K70OWoUN49hfwkxA4=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/beanhub-cli/default.nix b/pkgs/development/python-modules/beanhub-cli/default.nix
index c9a1f7abe3c8..178476f284b9 100644
--- a/pkgs/development/python-modules/beanhub-cli/default.nix
+++ b/pkgs/development/python-modules/beanhub-cli/default.nix
@@ -39,7 +39,7 @@
 
 buildPythonPackage rec {
   pname = "beanhub-cli";
-  version = "2.1.1";
+  version = "3.0.1";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -48,7 +48,7 @@ buildPythonPackage rec {
     owner = "LaunchPlatform";
     repo = "beanhub-cli";
     tag = version;
-    hash = "sha256-mGLg6Kgur2LAcujFzO/rkSPAC2t3wR5CO2AeOO0+bFI=";
+    hash = "sha256-hreVGsptCGW6L3rj6Ec8+lefZWpQ4tZtUEJI+NxTO7w=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/beanhub-extract/default.nix b/pkgs/development/python-modules/beanhub-extract/default.nix
index bf21ebb68d4a..6030be8ee225 100644
--- a/pkgs/development/python-modules/beanhub-extract/default.nix
+++ b/pkgs/development/python-modules/beanhub-extract/default.nix
@@ -3,16 +3,16 @@
   fetchFromGitHub,
   buildPythonPackage,
   pythonOlder,
+  hatchling,
   pytestCheckHook,
   iso8601,
-  poetry-core,
   pytest-lazy-fixture,
   pytz,
 }:
 
 buildPythonPackage rec {
   pname = "beanhub-extract";
-  version = "0.1.5";
+  version = "0.1.6";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -21,10 +21,10 @@ buildPythonPackage rec {
     owner = "LaunchPlatform";
     repo = "beanhub-extract";
     tag = version;
-    hash = "sha256-L3TM3scBJGlOXXxeJAkiqMkpBmhJZB6b+IQT2DGIfO0=";
+    hash = "sha256-N4LCMZRPbIzVUPDCW3mAVw6WwpuvxiJmMIoyk8VwXS0=";
   };
 
-  build-system = [ poetry-core ];
+  build-system = [ hatchling ];
 
   pythonRelaxDeps = [ "pytz" ];
 
@@ -43,7 +43,7 @@ buildPythonPackage rec {
   meta = {
     description = "Simple library for extracting all kind of bank account transaction export files, mostly for beanhub-import to ingest and generate transactions";
     homepage = "https://github.com/LaunchPlatform/beanhub-extract/";
-    changelog = "https://github.com/LaunchPlatform/beanhub-extract/releases/tag/${version}";
+    changelog = "https://github.com/LaunchPlatform/beanhub-extract/releases/tag/${src.tag}";
     license = with lib.licenses; [ mit ];
     maintainers = with lib.maintainers; [ fangpen ];
   };
diff --git a/pkgs/development/python-modules/beartype/default.nix b/pkgs/development/python-modules/beartype/default.nix
index 2873b74ba566..1458225ed605 100644
--- a/pkgs/development/python-modules/beartype/default.nix
+++ b/pkgs/development/python-modules/beartype/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "beartype";
-  version = "0.19.0";
+  version = "0.21.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "beartype";
     repo = "beartype";
     tag = "v${version}";
-    hash = "sha256-uUwqgK7K8x61J7A6S/DGLJljSKABxsbOCsFBDtsameU=";
+    hash = "sha256-oD7LS+c+mZ8W4YnAaAYxQkbUlmO8E2TPxy0PBI7Jr7A=";
   };
 
   build-system = [ hatchling ];
@@ -41,7 +41,7 @@ buildPythonPackage rec {
   meta = {
     description = "Fast runtime type checking for Python";
     homepage = "https://github.com/beartype/beartype";
-    changelog = "https://github.com/beartype/beartype/releases/tag/v${version}";
+    changelog = "https://github.com/beartype/beartype/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/bentoml/default.nix b/pkgs/development/python-modules/bentoml/default.nix
index 57bbfbf1e6c1..12f5cf61a0c0 100644
--- a/pkgs/development/python-modules/bentoml/default.nix
+++ b/pkgs/development/python-modules/bentoml/default.nix
@@ -74,7 +74,7 @@
 }:
 
 let
-  version = "1.3.20";
+  version = "1.4.19";
   aws = [ fs-s3fs ];
   grpc = [
     grpcio
@@ -124,7 +124,7 @@ let
     owner = "bentoml";
     repo = "BentoML";
     tag = "v${version}";
-    hash = "sha256-zc/JvnEEoV21EbBHhLBWvilidXHx1pxYsBYISFg16Us=";
+    hash = "sha256-sRQfjB3K5F6lYeW92O7BV2slQ+DRCuMTVqRG8vT+9wc=";
   };
 in
 buildPythonPackage {
diff --git a/pkgs/development/python-modules/binsync/default.nix b/pkgs/development/python-modules/binsync/default.nix
index 2e396eeb365e..7883e9b5ed42 100644
--- a/pkgs/development/python-modules/binsync/default.nix
+++ b/pkgs/development/python-modules/binsync/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "binsync";
-  version = "5.3.0";
+  version = "5.5.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "binsync";
     repo = "binsync";
     tag = "v${version}";
-    hash = "sha256-f0pPuNTrZ5+iuJgtxLXJF89C9hKXwplhBA/olyhfsQ4=";
+    hash = "sha256-C9yIb//h1pAJnlWT4+VgeVzeSjd0sfn8o4yfePNF/YM=";
   };
 
   build-system = [ setuptools ];
@@ -61,7 +61,7 @@ buildPythonPackage rec {
   meta = {
     description = "Reversing plugin for cross-decompiler collaboration, built on git";
     homepage = "https://github.com/binsync/binsync";
-    changelog = "https://github.com/binsync/binsync/releases/tag/v${version}";
+    changelog = "https://github.com/binsync/binsync/releases/tag/${src.tag}";
     license = lib.licenses.bsd2;
     maintainers = with lib.maintainers; [ scoder12 ];
   };
diff --git a/pkgs/development/python-modules/biosppy/default.nix b/pkgs/development/python-modules/biosppy/default.nix
index b47e9efba4b2..29d1968731ff 100644
--- a/pkgs/development/python-modules/biosppy/default.nix
+++ b/pkgs/development/python-modules/biosppy/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "biosppy";
-  version = "2.2.2";
+  version = "2.2.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scientisst";
     repo = "BioSPPy";
     tag = "v${version}";
-    hash = "sha256-U0ZftAlRlazSO66raH74o/6eP1RpmuFoA6HJ+xmgKR8=";
+    hash = "sha256-R+3K8r+nzrCiZegxur/rf3/gDGhN9bVNMhlK94SHer0=";
   };
 
   build-system = [
@@ -64,7 +64,7 @@ buildPythonPackage rec {
   meta = {
     description = "Biosignal Processing in Python";
     homepage = "https://biosppy.readthedocs.io/";
-    changelog = "https://github.com/scientisst/BioSPPy/releases/tag/v${version}";
+    changelog = "https://github.com/scientisst/BioSPPy/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ genga898 ];
   };
diff --git a/pkgs/development/python-modules/bitarray/default.nix b/pkgs/development/python-modules/bitarray/default.nix
index f99321e0e04f..0914b1ad5bfe 100644
--- a/pkgs/development/python-modules/bitarray/default.nix
+++ b/pkgs/development/python-modules/bitarray/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "bitarray";
-  version = "3.4.3";
+  version = "3.6.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-3d+yvwhrZq7BwBENxGZCtxYfWHpkQc/nTanjI5dfYvA=";
+    hash = "sha256-IP68hJofhY5qV6fUezI/6ecnxXnd1SbTF62IMXSKZqg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/bitbox02/default.nix b/pkgs/development/python-modules/bitbox02/default.nix
index 69b2b258e1f2..62c9ca5edcc1 100644
--- a/pkgs/development/python-modules/bitbox02/default.nix
+++ b/pkgs/development/python-modules/bitbox02/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "bitbox02";
-  version = "6.3.0";
+  version = "7.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-0D+yIovlYw8dfDUeW+vcualbvmLs+IySkTpmHwk2meM=";
+    hash = "sha256-J9UQXrFaVTcZ+p0+aJIchksAyGGzpkQETZrGhCbxhEc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/bitsandbytes/default.nix b/pkgs/development/python-modules/bitsandbytes/default.nix
index 14299f664c4b..6dd1b0bd30a5 100644
--- a/pkgs/development/python-modules/bitsandbytes/default.nix
+++ b/pkgs/development/python-modules/bitsandbytes/default.nix
@@ -11,7 +11,7 @@
 
 let
   pname = "bitsandbytes";
-  version = "0.46.0";
+  version = "0.46.1";
 
   inherit (torch) cudaPackages cudaSupport;
   inherit (cudaPackages) cudaMajorMinorVersion;
@@ -57,7 +57,7 @@ buildPythonPackage {
     owner = "bitsandbytes-foundation";
     repo = "bitsandbytes";
     tag = version;
-    hash = "sha256-q1ltNYO5Ex6F2bfCcsekdsWjzXoal7g4n/LIHVGuj+k=";
+    hash = "sha256-CAGKp8aFp1GjJ1uR+O1Ptxr8wfz1zECCEWhWMYs3zEQ=";
   };
 
   # By default, which library is loaded depends on the result of `torch.cuda.is_available()`.
diff --git a/pkgs/development/python-modules/black/default.nix b/pkgs/development/python-modules/black/default.nix
index 2dbdeb9906af..70fac527e59e 100644
--- a/pkgs/development/python-modules/black/default.nix
+++ b/pkgs/development/python-modules/black/default.nix
@@ -3,6 +3,7 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  fetchpatch,
   pythonOlder,
   pytestCheckHook,
   aiohttp,
@@ -35,6 +36,24 @@ buildPythonPackage rec {
     hash = "sha256-M0ltXNEiKtczkTUrSujaFSU8Xeibk6gLPiyNmhnsJmY=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "click-8.2-compat-1.patch";
+      url = "https://github.com/psf/black/commit/14e1de805a5d66744a08742cad32d1660bf7617a.patch";
+      hash = "sha256-fHRlMetE6+09MKkuFNQQr39nIKeNrqwQuBNqfIlP4hc=";
+    })
+    (fetchpatch {
+      name = "click-8.2-compat-2.patch";
+      url = "https://github.com/psf/black/commit/ed64d89faa7c738c4ba0006710f7e387174478af.patch";
+      hash = "sha256-df/J6wiRqtnHk3mAY3ETiRR2G4hWY1rmZMfm2rjP2ZQ=";
+    })
+    (fetchpatch {
+      name = "click-8.2-compat-3.patch";
+      url = "https://github.com/psf/black/commit/b0f36f5b4233ef4cf613daca0adc3896d5424159.patch";
+      hash = "sha256-SGLCxbgrWnAi79IjQOb2H8mD/JDbr2SGfnKyzQsJrOA=";
+    })
+  ];
+
   nativeBuildInputs = [
     hatch-fancy-pypi-readme
     hatch-vcs
diff --git a/pkgs/development/python-modules/bleak/default.nix b/pkgs/development/python-modules/bleak/default.nix
index 6a558e4aa620..6ec575619579 100644
--- a/pkgs/development/python-modules/bleak/default.nix
+++ b/pkgs/development/python-modules/bleak/default.nix
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Bluetooth Low Energy platform agnostic client";
     homepage = "https://github.com/hbldh/bleak";
-    changelog = "https://github.com/hbldh/bleak/blob/v${version}/CHANGELOG.rst";
+    changelog = "https://github.com/hbldh/bleak/blob/${src.tag}/CHANGELOG.rst";
     license = licenses.mit;
     platforms = platforms.linux;
     maintainers = with maintainers; [ oxzi ];
diff --git a/pkgs/development/python-modules/blessed/default.nix b/pkgs/development/python-modules/blessed/default.nix
index 6bb56aaab30e..2e416b2403eb 100644
--- a/pkgs/development/python-modules/blessed/default.nix
+++ b/pkgs/development/python-modules/blessed/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "blessed";
-  version = "1.20.0";
+  version = "1.21.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-LN1n+HRuBI8A30eiiA9NasvNs5kDG2BONLqPcdV4doA=";
+    hash = "sha256-7Oi7xHWKuRdkUvTjpxnXAIjrVzl5jNVYLJ4F8qKDN+w=";
   };
 
   nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/blis/default.nix b/pkgs/development/python-modules/blis/default.nix
index 0aabdaea5196..c77191f806f3 100644
--- a/pkgs/development/python-modules/blis/default.nix
+++ b/pkgs/development/python-modules/blis/default.nix
@@ -67,6 +67,11 @@ buildPythonPackage rec {
     rm -rf ./blis
   '';
 
+  disabledTestPaths = [
+    # ImportError: cannot import name 'NO_CONJUGATE' from 'blis.cy'
+    "tests/test_dotv.py"
+  ];
+
   passthru = {
     tests = {
       numpy_1 = blis.overridePythonAttrs (old: {
diff --git a/pkgs/development/python-modules/boost-histogram/default.nix b/pkgs/development/python-modules/boost-histogram/default.nix
index 11e569659ab8..667d5e177ebd 100644
--- a/pkgs/development/python-modules/boost-histogram/default.nix
+++ b/pkgs/development/python-modules/boost-histogram/default.nix
@@ -27,14 +27,14 @@
 
 buildPythonPackage rec {
   pname = "boost-histogram";
-  version = "1.5.1";
+  version = "1.5.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scikit-hep";
     repo = "boost-histogram";
     tag = "v${version}";
-    hash = "sha256-7E4y3P3RzVmIHb5mEoEYWZSwWnmL3LbGqYjGbnszM98=";
+    hash = "sha256-fWbvv9MiBZZiTZLu78tMR5Cx0/7xSuVIya3dkuahPE4=";
   };
 
   nativeBuildInputs = [ cmake ];
@@ -69,7 +69,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python bindings for the C++14 Boost::Histogram library";
     homepage = "https://github.com/scikit-hep/boost-histogram";
-    changelog = "https://github.com/scikit-hep/boost-histogram/releases/tag/v${version}";
+    changelog = "https://github.com/scikit-hep/boost-histogram/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ veprbl ];
   };
diff --git a/pkgs/development/python-modules/boto3/default.nix b/pkgs/development/python-modules/boto3/default.nix
index 39b5dd0c3cad..05ba5ae02f3b 100644
--- a/pkgs/development/python-modules/boto3/default.nix
+++ b/pkgs/development/python-modules/boto3/default.nix
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "boto";
     repo = "boto3";
     tag = version;
-    hash = "sha256-3NK9xp58w+Wrhs/i7eXLF/P9Dwadptrr4LlpV6MRbGM=";
+    hash = "sha256-+3UcnKgDIA9PPELnB70La+Lo03SMouVLzvLQ9zyFGsE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/botocore/default.nix b/pkgs/development/python-modules/botocore/default.nix
index 742b4bc893d8..49a89d8e3253 100644
--- a/pkgs/development/python-modules/botocore/default.nix
+++ b/pkgs/development/python-modules/botocore/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "botocore";
-  version = "1.38.32"; # N.B: if you change this, change boto3 and awscli to a matching version
+  version = "1.40.4"; # N.B: if you change this, change boto3 and awscli to a matching version
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "boto";
     repo = "botocore";
     tag = version;
-    hash = "sha256-KW9EAeunL3+pccGsrFitonc5EHdm2Cd+7dM3kdvdkvM=";
+    hash = "sha256-VJAd9aCJkwSyurAWF/YAVRcSTR+9ZbkH7H6LZGvcXYY=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/bottle/default.nix b/pkgs/development/python-modules/bottle/default.nix
index 5d7a8d100f24..72df474668ac 100644
--- a/pkgs/development/python-modules/bottle/default.nix
+++ b/pkgs/development/python-modules/bottle/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "bottle";
-  version = "0.13.3";
+  version = "0.13.4";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HCOuswqooT85xgwNpJRTDd1d49ojW8QxuBilDZmd5J8=";
+    hash = "sha256-eH54Mn4SsieTjeAiSDM9eIz+RZh+3Kc1+PiOA0csP0c=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/brevo-python/default.nix b/pkgs/development/python-modules/brevo-python/default.nix
index 965fcdfee708..746776e97ca9 100644
--- a/pkgs/development/python-modules/brevo-python/default.nix
+++ b/pkgs/development/python-modules/brevo-python/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "brevo-python";
-  version = "1.1.2";
+  version = "1.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "getbrevo";
     repo = "brevo-python";
     tag = "v${version}";
-    hash = "sha256-XOUFyUrqVlI7Qr4uzeXr6GJuQ+QTVhsueT1xxVQMm14=";
+    hash = "sha256-VYj1r69pgKgNCXzxRqvwlj5w+y3IIu21bsZJAe/7zf8=";
   };
 
   build-system = [ setuptools ];
@@ -35,6 +35,11 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTestPaths = [
+    # broken import; https://github.com/getbrevo/brevo-python/issues/2
+    "test/test_configuration.py"
+  ];
+
   pythonImportsCheck = [ "brevo_python" ];
 
   meta = {
diff --git a/pkgs/development/python-modules/bthome-ble/default.nix b/pkgs/development/python-modules/bthome-ble/default.nix
index 5d9294e1b658..665094952cc1 100644
--- a/pkgs/development/python-modules/bthome-ble/default.nix
+++ b/pkgs/development/python-modules/bthome-ble/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "bthome-ble";
-  version = "3.13.1";
+  version = "3.14.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Bluetooth-Devices";
     repo = "bthome-ble";
     tag = "v${version}";
-    hash = "sha256-oGFjWe9e386EPAJGKL8Qk55iXoyW3rXuyG7ElyQYurg=";
+    hash = "sha256-1jgrE7EwYJPb/F5gIXmRFU3xBG00tIXRA8BsE20Tw6Y=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/build/default.nix b/pkgs/development/python-modules/build/default.nix
index ae2fe86d38f6..61a426b2cf28 100644
--- a/pkgs/development/python-modules/build/default.nix
+++ b/pkgs/development/python-modules/build/default.nix
@@ -21,26 +21,21 @@
 
 buildPythonPackage rec {
   pname = "build";
-  version = "1.2.2.post1";
-  format = "pyproject";
-
-  disabled = pythonOlder "3.7";
+  version = "1.3.0";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pypa";
     repo = "build";
-    rev = "refs/tags/${version}";
-    hash = "sha256-PHS7CjdKo5u4VTpbo409zLQAOmslV9bX0j0S83Gdv1U=";
+    tag = version;
+    hash = "sha256-w2YKQzni8e6rpnQJH2J0bHzRigjWOlWiI8Po5d3ZqS8=";
   };
 
-  postPatch = ''
-    # not strictly required, causes circular dependency cycle
-    sed -i '/importlib-metadata >= 4.6/d' pyproject.toml
-  '';
+  build-system = [ flit-core ];
 
-  nativeBuildInputs = [ flit-core ];
+  pythonRemoveDeps = [ "importlib-metadata" ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     packaging
     pyproject-hooks
   ]
@@ -107,7 +102,7 @@ buildPythonPackage rec {
       is a simple build tool and does not perform any dependency management.
     '';
     homepage = "https://github.com/pypa/build";
-    changelog = "https://github.com/pypa/build/blob/${version}/CHANGELOG.rst";
+    changelog = "https://github.com/pypa/build/blob/${src.tag}/CHANGELOG.rst";
     license = licenses.mit;
     maintainers = [ maintainers.fab ];
     teams = [ teams.python ];
diff --git a/pkgs/development/python-modules/buildcatrust/default.nix b/pkgs/development/python-modules/buildcatrust/default.nix
index cc2b5b5a2946..c8d57ce48032 100644
--- a/pkgs/development/python-modules/buildcatrust/default.nix
+++ b/pkgs/development/python-modules/buildcatrust/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "buildcatrust";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Ac10CZdihFBmr5LE6xFKx4+zr2n5nyR23px6N4vN05M=";
+    hash = "sha256-GYw/RN1OK5fqo3em8hia2l/IwN76hnPnFuYprqeX144=";
   };
 
   nativeBuildInputs = [ flit-core ];
diff --git a/pkgs/development/python-modules/bumps/default.nix b/pkgs/development/python-modules/bumps/default.nix
index 0070effd7a0a..c9ffdad6bb8f 100644
--- a/pkgs/development/python-modules/bumps/default.nix
+++ b/pkgs/development/python-modules/bumps/default.nix
@@ -7,14 +7,14 @@
 
 buildPythonPackage rec {
   pname = "bumps";
-  version = "0.9.3";
+  version = "1.0.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-MpUpj3/hsjkrsv+Ix6Cuadd6dpivWAqBVwBSygW6Uw8=";
+    hash = "sha256-YfnBA1rCD05B4XOS611qgi4ab3xKoYs108mwhj/I+sg=";
   };
 
   # Module has no tests
diff --git a/pkgs/development/python-modules/busylight-for-humans/default.nix b/pkgs/development/python-modules/busylight-for-humans/default.nix
index f60436f64846..1cbb1d14136c 100644
--- a/pkgs/development/python-modules/busylight-for-humans/default.nix
+++ b/pkgs/development/python-modules/busylight-for-humans/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "busylight-for-humans";
-  version = "0.35.2";
+  version = "0.37.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "JnyJny";
     repo = "busylight";
     tag = "v${version}";
-    hash = "sha256-0jmaVMN4wwqoO5wGMaV4kJefNUPOuJpWbsqHcZZ0Nh4=";
+    hash = "sha256-uKuQy4ce6WTTpprAbQ6QE7WlotMlVacaDZ+dsvY1N58=";
   };
 
   build-system = [ poetry-core ];
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Control USB connected presence lights from multiple vendors via the command-line or web API";
     homepage = "https://github.com/JnyJny/busylight";
-    changelog = "https://github.com/JnyJny/busylight/releases/tag/${version}";
+    changelog = "https://github.com/JnyJny/busylight/releases/tag/${src.tag}";
     license = licenses.asl20;
     teams = [ teams.helsinki-systems ];
     mainProgram = "busylight";
diff --git a/pkgs/development/python-modules/cachetools/default.nix b/pkgs/development/python-modules/cachetools/default.nix
index 4411b9c91bf1..39923013689a 100644
--- a/pkgs/development/python-modules/cachetools/default.nix
+++ b/pkgs/development/python-modules/cachetools/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "cachetools";
-  version = "5.5.2";
+  version = "6.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "tkem";
     repo = "cachetools";
     tag = "v${version}";
-    hash = "sha256-CWgl2UW7+rBXRQ6N/QY3vJiLsrPfmplmQbxPp2vcdU0=";
+    hash = "sha256-o3Ice6w7Ovot+nsmTpsl/toosZuVbi9RvRGs07W4H0Y=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/cachier/default.nix b/pkgs/development/python-modules/cachier/default.nix
index dc6371f50c5c..60f46103311d 100644
--- a/pkgs/development/python-modules/cachier/default.nix
+++ b/pkgs/development/python-modules/cachier/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "cachier";
-  version = "3.1.2";
+  version = "4.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "python-cachier";
     repo = "cachier";
     tag = "v${version}";
-    hash = "sha256-siighT6hMicN+F/LIXfUAPQ2kkRiyk7CtjqmyC/qCFg=";
+    hash = "sha256-FmrwH5Ksmgt0HA5eUN5LU36P5sY4PymRKsUWVkQlvBo=";
   };
 
   pythonRemoveDeps = [ "setuptools" ];
@@ -80,7 +80,7 @@ buildPythonPackage rec {
 
   meta = {
     homepage = "https://github.com/python-cachier/cachier";
-    changelog = "https://github.com/python-cachier/cachier/releases/tag/v${version}";
+    changelog = "https://github.com/python-cachier/cachier/releases/tag/${src.tag}";
     description = "Persistent, stale-free, local and cross-machine caching for functions";
     mainProgram = "cachier";
     maintainers = with lib.maintainers; [ pbsds ];
diff --git a/pkgs/development/python-modules/caio/default.nix b/pkgs/development/python-modules/caio/default.nix
index ae4a10952868..be7dbc35ee8a 100644
--- a/pkgs/development/python-modules/caio/default.nix
+++ b/pkgs/development/python-modules/caio/default.nix
@@ -5,7 +5,8 @@
   buildPythonPackage,
   fetchFromGitHub,
   pytest-aiohttp,
-  pytestCheckHook,
+  pytest-asyncio_0,
+  pytest8_3CheckHook,
   pythonOlder,
   setuptools,
 }:
@@ -28,8 +29,8 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     aiomisc
-    pytest-aiohttp
-    pytestCheckHook
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
+    pytest8_3CheckHook
   ];
 
   env.NIX_CFLAGS_COMPILE = toString (
diff --git a/pkgs/development/python-modules/caldav/default.nix b/pkgs/development/python-modules/caldav/default.nix
index 99a18e14a498..bbff613096a2 100644
--- a/pkgs/development/python-modules/caldav/default.nix
+++ b/pkgs/development/python-modules/caldav/default.nix
@@ -5,33 +5,35 @@
   icalendar,
   lxml,
   pytestCheckHook,
-  pythonOlder,
   python,
   recurring-ical-events,
   requests,
-  setuptools,
-  setuptools-scm,
+  hatchling,
+  hatch-vcs,
+  proxy-py,
+  pyfakefs,
   toPythonModule,
   tzlocal,
   vobject,
   xandikos,
+  writableTmpDirAsHomeHook,
 }:
 
 buildPythonPackage rec {
   pname = "caldav";
-  version = "1.6.0";
+  version = "2.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python-caldav";
     repo = "caldav";
     tag = "v${version}";
-    hash = "sha256-SWecaXiXp8DSOLVWzgPsbL7UGCtTBfNXYmuDQGdyqbQ=";
+    hash = "sha256-n7ZKTBXg66firbS34J41NrTM/PL/OrKMnS4iguRz4Ho=";
   };
 
   build-system = [
-    setuptools
-    setuptools-scm
+    hatchling
+    hatch-vcs
   ];
 
   dependencies = [
@@ -43,9 +45,17 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    proxy-py
+    pyfakefs
     pytestCheckHook
     tzlocal
     (toPythonModule (xandikos.override { python3Packages = python.pkgs; }))
+    writableTmpDirAsHomeHook
+  ];
+
+  disabledTestPaths = [
+    "tests/test_docs.py"
+    "tests/test_examples.py"
   ];
 
   pythonImportsCheck = [ "caldav" ];
@@ -53,7 +63,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "CalDAV (RFC4791) client library";
     homepage = "https://github.com/python-caldav/caldav";
-    changelog = "https://github.com/python-caldav/caldav/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/python-caldav/caldav/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [
       marenz
diff --git a/pkgs/development/python-modules/canonical-sphinx-extensions/default.nix b/pkgs/development/python-modules/canonical-sphinx-extensions/default.nix
index d87c3c5dd876..c4c8d9dab408 100644
--- a/pkgs/development/python-modules/canonical-sphinx-extensions/default.nix
+++ b/pkgs/development/python-modules/canonical-sphinx-extensions/default.nix
@@ -12,13 +12,13 @@
 
 buildPythonPackage rec {
   pname = "canonical-sphinx-extensions";
-  version = "0.0.27";
+  version = "0.0.33";
   pyproject = true;
 
   src = fetchPypi {
     pname = "canonical_sphinx_extensions";
     inherit version;
-    hash = "sha256-ZorSmn+PAVS8xO7X3zk6u3W7pn3JB9w0PhFAXzv6l78=";
+    hash = "sha256-Rb4FK1e0pb+fub58Fq61i3kMhRm/nekHNr91zft8iJY=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/cantools/default.nix b/pkgs/development/python-modules/cantools/default.nix
index 2710187e569d..2fd9f9b31bab 100644
--- a/pkgs/development/python-modules/cantools/default.nix
+++ b/pkgs/development/python-modules/cantools/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "cantools";
-  version = "40.2.3";
+  version = "40.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-PFXL19fVJ6VluYEj+7uPXfCRMvdM63Iv9UH9gLWZFCQ=";
+    hash = "sha256-xucuPUaMi3ECi+vPR3MFcE74F95eTWlGS/CNIoi+gSU=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/cartopy/default.nix b/pkgs/development/python-modules/cartopy/default.nix
index fc842ff4fd4c..8df52e398f07 100644
--- a/pkgs/development/python-modules/cartopy/default.nix
+++ b/pkgs/development/python-modules/cartopy/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "cartopy";
-  version = "0.24.1";
+  version = "0.25.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-AckQ1WNMaafv3sRuChfUc9Iyh2fwAdTcC1xLSOWFyL0=";
+    hash = "sha256-VfGjkOXz8HWyIcfZH7ECWK2XjbeGx5MOugbrRdKHU/4=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/catppuccin/default.nix b/pkgs/development/python-modules/catppuccin/default.nix
index d0fc7210c542..84b5be78fc3f 100644
--- a/pkgs/development/python-modules/catppuccin/default.nix
+++ b/pkgs/development/python-modules/catppuccin/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "catppuccin";
-  version = "2.4.1";
+  version = "2.5.0";
 
   pyproject = true;
 
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "catppuccin";
     repo = "python";
     tag = "v${version}";
-    hash = "sha256-lQsJnzOnyDIUu1mbydiyfRwh0zCRGU35p0Kn2a3H/48=";
+    hash = "sha256-wumJ8kpr+C2pdw8jYf+IqYTdSB6Iy37yZqPKycYmOSs=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/cattrs/default.nix b/pkgs/development/python-modules/cattrs/default.nix
index ee3d8559806f..9d635cd1c9bb 100644
--- a/pkgs/development/python-modules/cattrs/default.nix
+++ b/pkgs/development/python-modules/cattrs/default.nix
@@ -4,7 +4,6 @@
   buildPythonPackage,
   cbor2,
   fetchFromGitHub,
-  fetchpatch2,
   exceptiongroup,
   hatchling,
   hatch-vcs,
@@ -26,34 +25,16 @@
 
 buildPythonPackage rec {
   pname = "cattrs";
-  version = "24.1.3";
+  version = "25.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python-attrs";
     repo = "cattrs";
     tag = "v${version}";
-    hash = "sha256-yrrb2Lvq7zMzeOLr8wwxVsKmPYEZxzDKR2mnCMNuHdE=";
+    hash = "sha256-kaB/UJcd4E4PUkz6mD53lXtmj4Z4P+Tuu7bSljYVOO4=";
   };
 
-  patches = [
-    # https://github.com/python-attrs/cattrs/pull/576
-    (fetchpatch2 {
-      name = "attrs-24_2-compatibility1.patch";
-      url = "https://github.com/python-attrs/cattrs/commit/2d37226ff19506e23bbc291125a29ce514575819.patch";
-      excludes = [
-        "pyproject.toml"
-        "pdm.lock"
-      ];
-      hash = "sha256-nbk7rmOFk42DXYdOgw4Oe3gl3HbxNEtaJ7ZiVSBb3YA=";
-    })
-    (fetchpatch2 {
-      name = "attrs-24_2-compatibility2.patch";
-      url = "https://github.com/python-attrs/cattrs/commit/4bd6dde556042241c6381e1993cedd6514921f58.patch";
-      hash = "sha256-H1xSAYjvVUI8/jON3LWg2F2TlSxejf6TU1jpCeqly6I=";
-    })
-  ];
-
   build-system = [
     hatchling
     hatch-vcs
@@ -61,10 +42,10 @@ buildPythonPackage rec {
 
   dependencies = [
     attrs
+    typing-extensions
   ]
   ++ lib.optionals (pythonOlder "3.11") [
     exceptiongroup
-    typing-extensions
   ];
 
   nativeCheckInputs = [
@@ -79,7 +60,6 @@ buildPythonPackage rec {
     pytestCheckHook
     pyyaml
     tomlkit
-    typing-extensions
     ujson
   ];
 
@@ -117,7 +97,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python custom class converters for attrs";
     homepage = "https://github.com/python-attrs/cattrs";
-    changelog = "https://github.com/python-attrs/cattrs/blob/${src.rev}/HISTORY.md";
+    changelog = "https://github.com/python-attrs/cattrs/blob/${src.tag}/HISTORY.md";
     license = with lib.licenses; [ mit ];
     maintainers = with lib.maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/causal-conv1d/default.nix b/pkgs/development/python-modules/causal-conv1d/default.nix
index 924cc8b07df3..ffc494ce6ff3 100644
--- a/pkgs/development/python-modules/causal-conv1d/default.nix
+++ b/pkgs/development/python-modules/causal-conv1d/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "causal-conv1d";
-  version = "1.5.0.post8";
+  version = "1.5.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Dao-AILab";
     repo = "causal-conv1d";
     tag = "v${version}";
-    hash = "sha256-CuDAEjRG6NGCoYx5r8pFVnec+3Pqh8ZldzTVx09N6E0=";
+    hash = "sha256-B2I5QiJl0p5d1BeQcMbJBAYUb10HzqFd88QMM8Rerm0=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/celery-redbeat/default.nix b/pkgs/development/python-modules/celery-redbeat/default.nix
index f79f5e94b4bf..c8d04153df73 100644
--- a/pkgs/development/python-modules/celery-redbeat/default.nix
+++ b/pkgs/development/python-modules/celery-redbeat/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "celery-redbeat";
-  version = "2.3.2";
+  version = "2.3.3";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "sibson";
     repo = "redbeat";
     tag = "v${version}";
-    hash = "sha256-nUVioETVIAjLPOmhBSf+bOUsYuV1C1VGwHz5KjbIjHc=";
+    hash = "sha256-bptEAOVxuwj9Y7LyBhtMU22Z1uCiJ4O4BZT2ytqQI80=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/certbot/default.nix b/pkgs/development/python-modules/certbot/default.nix
index 08cb1c05d5e5..0bb466a705b5 100644
--- a/pkgs/development/python-modules/certbot/default.nix
+++ b/pkgs/development/python-modules/certbot/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "certbot";
-  version = "4.0.0";
+  version = "4.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "certbot";
     repo = "certbot";
     tag = "v${version}";
-    hash = "sha256-GS4JLLXrX4+BQ4S6ySbOHUaUthCFYTCHWnOaMpfnIj8=";
+    hash = "sha256-nlNjBbXd4ujzVx10+UwqbXliuLVVf+UHR8Dl5CQzsZo=";
   };
 
   postPatch = "cd certbot"; # using sourceRoot would interfere with patches
@@ -66,6 +66,11 @@ buildPythonPackage rec {
     "-Wignore::DeprecationWarning"
   ];
 
+  disabledTests = [
+    # network access
+    "test_lock_order"
+  ];
+
   makeWrapperArgs = [ "--prefix PATH : ${dialog}/bin" ];
 
   # certbot.withPlugins has a similar calling convention as python*.withPackages
diff --git a/pkgs/development/python-modules/cfn-lint/default.nix b/pkgs/development/python-modules/cfn-lint/default.nix
index b13885318ae2..1f3434430a7c 100644
--- a/pkgs/development/python-modules/cfn-lint/default.nix
+++ b/pkgs/development/python-modules/cfn-lint/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "cfn-lint";
-  version = "1.32.1";
+  version = "1.38.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "aws-cloudformation";
     repo = "cfn-lint";
     tag = "v${version}";
-    hash = "sha256-s0CYQ6r3rA1PEiZ9LLFL3RC2PdfCgZHTqQ9nZUi1m+Q=";
+    hash = "sha256-oHbTB4XOyYSazyhO6No2+Z9QRR8tnuB3E4kGzG1HwTk=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/cgen/default.nix b/pkgs/development/python-modules/cgen/default.nix
index 186422a49c34..0821e5fc84ad 100644
--- a/pkgs/development/python-modules/cgen/default.nix
+++ b/pkgs/development/python-modules/cgen/default.nix
@@ -2,30 +2,32 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  hatchling,
   pytools,
   numpy,
-  pytest,
+  typing-extensions,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "cgen";
-  version = "2020.1";
-  format = "setuptools";
+  version = "2025.1";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "4ec99d0c832d9f95f5e51dd18a629ad50df0b5464ce557ef42c6e0cd9478bfcf";
+    hash = "sha256-efAeAQ1JwT5YtMqPLUmWprcXiWj18tkGJiczSArnotQ=";
   };
 
-  nativeCheckInputs = [ pytest ];
-  propagatedBuildInputs = [
+  build-system = [ hatchling ];
+
+  dependencies = [
     pytools
     numpy
+    typing-extensions
   ];
 
-  checkPhase = ''
-    pytest
-  '';
+  nativeCheckInputs = [ pytestCheckHook ];
 
   meta = {
     description = "C/C++ source generation from an AST";
diff --git a/pkgs/development/python-modules/checkdmarc/default.nix b/pkgs/development/python-modules/checkdmarc/default.nix
index 2f7c6473fc94..fcf750f68395 100644
--- a/pkgs/development/python-modules/checkdmarc/default.nix
+++ b/pkgs/development/python-modules/checkdmarc/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "checkdmarc";
-  version = "5.8.1";
+  version = "5.8.6";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "domainaware";
     repo = "checkdmarc";
     tag = version;
-    hash = "sha256-mdEfVfqK277A8QUc8rpLxS2pfdyg4Z5XqWpWkh9mFLk=";
+    hash = "sha256-MlHRBedBbcFbVga5q0havdD6M/YOlFW8SX0k1tRngmc=";
   };
 
   pythonRelaxDeps = [ "xmltodict" ];
diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix
index ee502767a117..31ee288bbc22 100644
--- a/pkgs/development/python-modules/cherrypy/default.nix
+++ b/pkgs/development/python-modules/cherrypy/default.nix
@@ -68,6 +68,7 @@ buildPythonPackage rec {
 
   pytestFlags = [
     "-Wignore::DeprecationWarning"
+    "-Wignore::pytest.PytestUnraisableExceptionWarning"
   ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/cirq-core/default.nix b/pkgs/development/python-modules/cirq-core/default.nix
index 7391d4563145..f0962e14788a 100644
--- a/pkgs/development/python-modules/cirq-core/default.nix
+++ b/pkgs/development/python-modules/cirq-core/default.nix
@@ -37,14 +37,14 @@
 
 buildPythonPackage rec {
   pname = "cirq-core";
-  version = "1.5.0";
+  version = "1.6.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "quantumlib";
     repo = "cirq";
     tag = "v${version}";
-    hash = "sha256-4FgXX4ox7BkjmLecxsvg0/JpcrHPn6hlFw5rk4bn9Cc=";
+    hash = "sha256-LlWv4wWQWZsTB9JXS21O1WkIYhKkJwY5SM70hnzfnDQ=";
   };
 
   sourceRoot = "${src.name}/${pname}";
@@ -105,7 +105,7 @@ buildPythonPackage rec {
   meta = {
     description = "Framework for creating, editing, and invoking Noisy Intermediate Scale Quantum (NISQ) circuits";
     homepage = "https://github.com/quantumlib/cirq";
-    changelog = "https://github.com/quantumlib/Cirq/releases/tag/v${version}";
+    changelog = "https://github.com/quantumlib/Cirq/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [
       drewrisinger
diff --git a/pkgs/development/python-modules/clarifai-grpc/default.nix b/pkgs/development/python-modules/clarifai-grpc/default.nix
index 632a7d39c118..84a99d7ff11d 100644
--- a/pkgs/development/python-modules/clarifai-grpc/default.nix
+++ b/pkgs/development/python-modules/clarifai-grpc/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "clarifai-grpc";
-  version = "11.5.5";
+  version = "11.6.6";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "Clarifai";
     repo = "clarifai-python-grpc";
     tag = version;
-    hash = "sha256-ijfuZh35HpmR3p7n2S+cCpcO4ld52StQOpxgPJtRqM4=";
+    hash = "sha256-/LCTiGJOdvMp+I/Gl0iySMg5MTPjBi3FatnkfifFkG0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/clarifai/default.nix b/pkgs/development/python-modules/clarifai/default.nix
index 433df5084cb5..f0cd9a2468f2 100644
--- a/pkgs/development/python-modules/clarifai/default.nix
+++ b/pkgs/development/python-modules/clarifai/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "clarifai";
-  version = "11.0.5";
+  version = "11.6.7";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "Clarifai";
     repo = "clarifai-python";
     tag = version;
-    hash = "sha256-JLZGVVrvGVUWr7WCTu2alVl+4GuYqLWP2dodgxYbmgc=";
+    hash = "sha256-1ftwsIKJ494F8q45x0LtvOZhM72AAhJWe0LligNNpkQ=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/cli-helpers/default.nix b/pkgs/development/python-modules/cli-helpers/default.nix
index 9655cd190758..fdd1962b5c87 100644
--- a/pkgs/development/python-modules/cli-helpers/default.nix
+++ b/pkgs/development/python-modules/cli-helpers/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "cli-helpers";
-  version = "2.4.0";
+  version = "2.7.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "cli_helpers";
     inherit version;
-    hash = "sha256-VZA7cFohKkc3Mdsg+ib1hlXjVAeLmcsTyZ7AaUAoek0=";
+    hash = "sha256-YtEXENvrwvxGAAPeEhVogyXYY2hZBW1oizhBm9QEi8A=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/click-plugins/default.nix b/pkgs/development/python-modules/click-plugins/default.nix
index bf4a347b92d7..2a5d4ccd334f 100644
--- a/pkgs/development/python-modules/click-plugins/default.nix
+++ b/pkgs/development/python-modules/click-plugins/default.nix
@@ -4,19 +4,23 @@
   fetchPypi,
   click,
   pytest,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "click-plugins";
-  version = "1.1.1";
-  format = "setuptools";
+  version = "1.1.1.2";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    sha256 = "46ab999744a9d831159c3411bb0c79346d94a444df9a3a3742e9ed63645f264b";
+    pname = "click_plugins";
+    inherit version;
+    sha256 = "sha256-1685hKmdJDwTGqGoKDMedjD0qIqXQf0FySeyBLz5ImE=";
   };
 
-  propagatedBuildInputs = [ click ];
+  build-system = [ setuptools ];
+
+  dependencies = [ click ];
 
   nativeCheckInputs = [ pytest ];
 
diff --git a/pkgs/development/python-modules/clickhouse-connect/default.nix b/pkgs/development/python-modules/clickhouse-connect/default.nix
index 3600ddedd7fe..020ecd26d6df 100644
--- a/pkgs/development/python-modules/clickhouse-connect/default.nix
+++ b/pkgs/development/python-modules/clickhouse-connect/default.nix
@@ -24,7 +24,7 @@
 }:
 buildPythonPackage rec {
   pname = "clickhouse-connect";
-  version = "0.8.17";
+  version = "0.8.18";
 
   format = "setuptools";
 
@@ -34,7 +34,7 @@ buildPythonPackage rec {
     repo = "clickhouse-connect";
     owner = "ClickHouse";
     tag = "v${version}";
-    hash = "sha256-UFsAKROnzaaAyUDHHARZIO8zZP3knUYoBdGSf9ZGjXo=";
+    hash = "sha256-lU35s8hldexyH8YC942r+sYm5gZCWqO2GXW0qtTTWWY=";
   };
 
   nativeBuildInputs = [ cython ];
diff --git a/pkgs/development/python-modules/cma/default.nix b/pkgs/development/python-modules/cma/default.nix
index 88d0a858d387..82b689d06ddd 100644
--- a/pkgs/development/python-modules/cma/default.nix
+++ b/pkgs/development/python-modules/cma/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "cma";
-  version = "4.0.0";
+  version = "4.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "CMA-ES";
     repo = "pycma";
     tag = "r${version}";
-    hash = "sha256-W4KDtX/Ho/XUrZr2cmS66Q0q90FEHRJN0VF4sMgonRw=";
+    hash = "sha256-2uCn5CZma9RLK8zaaPhiQCqnK+2dWgLNr5+Ck2cV6vI=";
   };
 
   build-system = [ setuptools ];
@@ -36,7 +36,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Library for Covariance Matrix Adaptation Evolution Strategy for non-linear numerical optimization";
     homepage = "https://github.com/CMA-ES/pycma";
-    changelog = "https://github.com/CMA-ES/pycma/releases/tag/r${version}";
+    changelog = "https://github.com/CMA-ES/pycma/releases/tag/r${src.tag}";
     license = licenses.bsd3;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/cmd2/default.nix b/pkgs/development/python-modules/cmd2/default.nix
index 2a49262b1662..4f3a9c1330f7 100644
--- a/pkgs/development/python-modules/cmd2/default.nix
+++ b/pkgs/development/python-modules/cmd2/default.nix
@@ -1,9 +1,7 @@
 {
   lib,
   stdenv,
-  attrs,
   buildPythonPackage,
-  colorama,
   fetchPypi,
   glibcLocales,
   gnureadline,
@@ -12,28 +10,28 @@
   pytest-mock,
   pytestCheckHook,
   pythonOlder,
+  rich-argparse,
   setuptools-scm,
   wcwidth,
 }:
 
 buildPythonPackage rec {
   pname = "cmd2";
-  version = "2.6.1";
+  version = "2.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ZQpYkr8psjPT1ndbXjzIE2SM/w15E09weYH2a6rtn0I=";
+    hash = "sha256-gdgTW0YhDh0DpagQuvhZBppiIUeIzu7DWI9E7thvvus=";
   };
 
   build-system = [ setuptools-scm ];
 
   dependencies = [
-    attrs
-    colorama
     pyperclip
+    rich-argparse
     wcwidth
   ]
   ++ lib.optional stdenv.hostPlatform.isDarwin gnureadline;
diff --git a/pkgs/development/python-modules/codepy/default.nix b/pkgs/development/python-modules/codepy/default.nix
index cf0410cc592c..44121e8a81da 100644
--- a/pkgs/development/python-modules/codepy/default.nix
+++ b/pkgs/development/python-modules/codepy/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "codepy";
-  version = "2019.1";
+  version = "2025.1";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "inducer";
     repo = "codepy";
-    rev = "v${version}";
-    hash = "sha256-viMfB/nDrvDA/IGRZEX+yXylxbbmqbh/fgdYXBzK0zM=";
+    tag = "v${version}";
+    hash = "sha256-PHIC3q9jQlRRoUoemVtyrl5hcZXMX28gRkI5Xpk9yBY=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/cohere/default.nix b/pkgs/development/python-modules/cohere/default.nix
index afd0c794cf8c..484a4ab0a434 100644
--- a/pkgs/development/python-modules/cohere/default.nix
+++ b/pkgs/development/python-modules/cohere/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "cohere";
-  version = "5.15.0";
+  version = "5.16.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "cohere-ai";
     repo = "cohere-python";
     tag = version;
-    hash = "sha256-X/6eAST9du6GT3j0d1xZuYfzN5p7rYlgGIIqv7V6vik=";
+    hash = "sha256-/knKmNbvMC+efdY+0adM62W81e/pMhGCxLU0KwxUhOE=";
   };
 
   build-system = [ poetry-core ];
@@ -44,6 +44,8 @@ buildPythonPackage rec {
     typing-extensions
   ];
 
+  pythonRelaxDeps = [ "httpx-sse" ];
+
   # tests require CO_API_KEY
   doCheck = false;
 
diff --git a/pkgs/development/python-modules/coincurve/default.nix b/pkgs/development/python-modules/coincurve/default.nix
index 01d8b292cbef..d70b8a020255 100644
--- a/pkgs/development/python-modules/coincurve/default.nix
+++ b/pkgs/development/python-modules/coincurve/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "coincurve";
-  version = "20.0.0";
+  version = "21.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "ofek";
     repo = "coincurve";
     tag = "v${version}";
-    hash = "sha256-NKx/iLuzFEu1UBuwa14x55Ab3laVAKEtX6dtoWi0dOg=";
+    hash = "sha256-+8/CsV2BTKZ5O2LIh5/kOKMfFrkt2Jsjuj37oiOgO6Y=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/colormath/default.nix b/pkgs/development/python-modules/colormath/default.nix
index d13d9a37efe1..b423ea754c56 100644
--- a/pkgs/development/python-modules/colormath/default.nix
+++ b/pkgs/development/python-modules/colormath/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   networkx,
   numpy,
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonOlder,
   setuptools,
 }:
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     numpy
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest8_3CheckHook ];
 
   pythonImportsCheck = [ "colormath" ];
 
diff --git a/pkgs/development/python-modules/comicon/default.nix b/pkgs/development/python-modules/comicon/default.nix
index 068452ae4ef5..7177c27f8854 100644
--- a/pkgs/development/python-modules/comicon/default.nix
+++ b/pkgs/development/python-modules/comicon/default.nix
@@ -38,6 +38,7 @@ buildPythonPackage rec {
   ];
 
   pythonRelaxDeps = [
+    "ebooklib"
     "lxml"
     "pillow"
     "pypdf"
diff --git a/pkgs/development/python-modules/comm/default.nix b/pkgs/development/python-modules/comm/default.nix
index 228381305e7a..9ef330e6be2a 100644
--- a/pkgs/development/python-modules/comm/default.nix
+++ b/pkgs/development/python-modules/comm/default.nix
@@ -9,7 +9,7 @@
 
 let
   pname = "comm";
-  version = "0.2.2";
+  version = "0.2.3";
 in
 buildPythonPackage {
   inherit pname version;
@@ -19,7 +19,7 @@ buildPythonPackage {
     owner = "ipython";
     repo = "comm";
     tag = "v${version}";
-    hash = "sha256-51HSSULhbKb1NdLJ//b3Vh6sOLWp0B4KW469htpduqM=";
+    hash = "sha256-gDggPu2h43lGyovTND9a3o9F2hWppV5uvAJa78JxJCo=";
   };
 
   nativeBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/compressed-tensors/default.nix b/pkgs/development/python-modules/compressed-tensors/default.nix
index dd9b49ac57f7..4c5eea81b0b6 100644
--- a/pkgs/development/python-modules/compressed-tensors/default.nix
+++ b/pkgs/development/python-modules/compressed-tensors/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "compressed-tensors";
-  version = "0.9.2";
+  version = "0.10.2";
   pyproject = true;
 
   # Release on PyPI is missing the `utils` directory, which `setup.py` wants to import
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "neuralmagic";
     repo = "compressed-tensors";
     tag = version;
-    hash = "sha256-PxW8zseDUF0EOh7E/N8swwgFTfvkoTpp+d3ngAUpFNU=";
+    hash = "sha256-BJsMyCs+rupt5+i5JlO7oY08Udc8hI3ZnMiN+8ja0mc=";
   };
 
   build-system = [ setuptools ];
@@ -61,7 +61,7 @@ buildPythonPackage rec {
   meta = {
     description = "Safetensors extension to efficiently store sparse quantized tensors on disk";
     homepage = "https://github.com/neuralmagic/compressed-tensors";
-    changelog = "https://github.com/neuralmagic/compressed-tensors/releases/tag/${version}";
+    changelog = "https://github.com/neuralmagic/compressed-tensors/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/concurrent-log-handler/default.nix b/pkgs/development/python-modules/concurrent-log-handler/default.nix
index 777a232ce1dd..752a59b9222b 100644
--- a/pkgs/development/python-modules/concurrent-log-handler/default.nix
+++ b/pkgs/development/python-modules/concurrent-log-handler/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "concurrent-log-handler";
-  version = "0.9.26";
+  version = "0.9.28";
   pyproject = true;
 
   src = fetchPypi {
     pname = "concurrent_log_handler";
     inherit version;
-    hash = "sha256-jyK/eXJKAVK56X2cLc9OyzOWB8gL8xL2gGYHAkMAa0k=";
+    hash = "sha256-TMJ5abNCAjm9FTd5Jm9A2XE+zoFOMSt6p1POYsbqzbg=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/conda/default.nix b/pkgs/development/python-modules/conda/default.nix
index 06e04c0b04ed..cc9512bd9bbc 100644
--- a/pkgs/development/python-modules/conda/default.nix
+++ b/pkgs/development/python-modules/conda/default.nix
@@ -28,7 +28,7 @@
 buildPythonPackage rec {
   __structuredAttrs = true;
   pname = "conda";
-  version = "25.5.1";
+  version = "25.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
@@ -36,7 +36,7 @@ buildPythonPackage rec {
     owner = "conda";
     repo = "conda";
     tag = version;
-    hash = "sha256-BHy0t+5jz1WdSElCQBgFh5VJC3iIYelS01iQeQByr+0=";
+    hash = "sha256-lvqR1ksYE23enSf4pxFpb/Z8yPoU9bVb4Hi2ZrhI0XA=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/configargparse/default.nix b/pkgs/development/python-modules/configargparse/default.nix
index df563510d24f..aa6531fdb91e 100644
--- a/pkgs/development/python-modules/configargparse/default.nix
+++ b/pkgs/development/python-modules/configargparse/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "configargparse";
-  version = "1.7";
+  version = "1.7.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,14 +20,9 @@ buildPythonPackage rec {
     owner = "bw2";
     repo = "ConfigArgParse";
     tag = version;
-    hash = "sha256-m77MY0IZ1AJkd4/Y7ltApvdF9y17Lgn92WZPYTCU9tA=";
+    hash = "sha256-wrWfQzr0smM83helOEJPbayrEpAtXJYYXIw4JnGLNho=";
   };
 
-  patches = [
-    # https://github.com/bw2/ConfigArgParse/pull/295
-    ./python3.13-compat.patch
-  ];
-
   optional-dependencies = {
     yaml = [ pyyaml ];
   };
@@ -48,7 +43,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Drop-in replacement for argparse";
     homepage = "https://github.com/bw2/ConfigArgParse";
-    changelog = "https://github.com/bw2/ConfigArgParse/releases/tag/${version}";
+    changelog = "https://github.com/bw2/ConfigArgParse/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/configargparse/python3.13-compat.patch b/pkgs/development/python-modules/configargparse/python3.13-compat.patch
deleted file mode 100644
index a079f37a18e6..000000000000
--- a/pkgs/development/python-modules/configargparse/python3.13-compat.patch
+++ /dev/null
@@ -1,112 +0,0 @@
-From c6a974211f1a13d492bb807ff6d07cefcc948a87 Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
-Date: Fri, 12 Jul 2024 08:15:40 +0200
-Subject: [PATCH 1/2] update test expectations for Python 3.13
-
-Python 3.13 no longer repeats the placeholder for options with multiple
-aliases in the help message.  For example, rather than:
-
-    -c CONFIG_FILE, --config CONFIG_FILE
-
-it now outputs:
-
-    -c, --config CONFIG_FILE
-
-Update the regular expressions to account for both possibilities.
-
-Fixes #294
----
- tests/test_configargparse.py | 24 ++++++++++++------------
- 1 file changed, 12 insertions(+), 12 deletions(-)
-
-diff --git a/tests/test_configargparse.py b/tests/test_configargparse.py
-index 288e082..e325afd 100644
---- a/tests/test_configargparse.py
-+++ b/tests/test_configargparse.py
-@@ -271,9 +271,9 @@ def testBasicCase2(self, use_groups=False):
-                 '  -h, --help \\s+ show this help message and exit\n'
-                 '  --genome GENOME \\s+ Path to genome file\n'
-                 '  -v\n'
--                '  -g MY_CFG_FILE, --my-cfg-file MY_CFG_FILE\n'
--                '  -d DBSNP, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
--                '  -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
-+                '  -g( MY_CFG_FILE)?, --my-cfg-file MY_CFG_FILE\n'
-+                '  -d( DBSNP)?, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
-+                '  -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
-                 7*r'(.+\s*)')
-         else:
-             self.assertRegex(self.format_help(),
-@@ -286,10 +286,10 @@ def testBasicCase2(self, use_groups=False):
-                 'g1:\n'
-                 '  --genome GENOME \\s+ Path to genome file\n'
-                 '  -v\n'
--                '  -g MY_CFG_FILE, --my-cfg-file MY_CFG_FILE\n\n'
-+                '  -g( MY_CFG_FILE)?, --my-cfg-file MY_CFG_FILE\n\n'
-                 'g2:\n'
--                '  -d DBSNP, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
--                '  -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
-+                '  -d( DBSNP)?, --dbsnp DBSNP\\s+\\[env var: DBSNP_PATH\\]\n'
-+                '  -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n\n'%OPTIONAL_ARGS_STRING +
-                 7*r'(.+\s*)')
- 
-         self.assertParseArgsRaises("invalid choice: 'ZZZ'",
-@@ -387,9 +387,9 @@ def testMutuallyExclusiveArgs(self):
-             ' \\s*-f2 TYPE2_CFG_FILE\\)\\s+\\(-f FRMT \\| -b\\)\n\n'
-             '%s:\n'
-             '  -h, --help            show this help message and exit\n'
--            '  -f1 TYPE1_CFG_FILE, --type1-cfg-file TYPE1_CFG_FILE\n'
--            '  -f2 TYPE2_CFG_FILE, --type2-cfg-file TYPE2_CFG_FILE\n'
--            '  -f FRMT, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n'
-+            '  -f1( TYPE1_CFG_FILE)?, --type1-cfg-file TYPE1_CFG_FILE\n'
-+            '  -f2( TYPE2_CFG_FILE)?, --type2-cfg-file TYPE2_CFG_FILE\n'
-+            '  -f( FRMT)?, --format FRMT\\s+\\[env var: OUTPUT_FORMAT\\]\n'
-             '  -b, --bam\\s+\\[env var: BAM_FORMAT\\]\n\n'
-             'group1:\n'
-             '  --genome GENOME       Path to genome file\n'
-@@ -875,7 +875,7 @@ def testConstructor_ConfigFileArgs(self):
-             'usage: .* \\[-h\\] -c CONFIG_FILE --genome GENOME\n\n'
-             '%s:\n'
-             '  -h, --help\\s+ show this help message and exit\n'
--            '  -c CONFIG_FILE, --config CONFIG_FILE\\s+ my config file\n'
-+            '  -c( CONFIG_FILE)?, --config CONFIG_FILE\\s+ my config file\n'
-             '  --genome GENOME\\s+ Path to genome file\n\n'%OPTIONAL_ARGS_STRING +
-             5*r'(.+\s*)')
- 
-@@ -935,8 +935,8 @@ def test_FormatHelp(self):
-             r'\[-w CONFIG_OUTPUT_PATH\]\s* --arg1\s+ARG1\s*\[--flag\]\s*'
-             '%s:\\s*'
-             '-h, --help \\s* show this help message and exit '
--            r'-c CONFIG_FILE, --config CONFIG_FILE\s+my config file '
--            r'-w CONFIG_OUTPUT_PATH, --write-config CONFIG_OUTPUT_PATH takes '
-+            r'-c( CONFIG_FILE)?, --config CONFIG_FILE\s+my config file '
-+            r'-w( CONFIG_OUTPUT_PATH)?, --write-config CONFIG_OUTPUT_PATH takes '
-             r'the current command line args and writes them '
-             r'out to a config file at the given path, then exits '
-             r'--arg1 ARG1 Arg1 help text '
-
-From 5e9f442374bc6d9707a43df13aaff684dff6b535 Mon Sep 17 00:00:00 2001
-From: =?UTF-8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
-Date: Fri, 12 Jul 2024 08:25:30 +0200
-Subject: [PATCH 2/2] skip exit_on_error* tests to fix 3.13 test failures
-
-Skip `exit_on_error*` tests from `test.test_argparse` to avoid test
-failures on Python 3.13.  The `exit_on_error=False` semantics
-is not supported by ConfigArgParse at the moment.
----
- tests/test_configargparse.py | 3 ++-
- 1 file changed, 2 insertions(+), 1 deletion(-)
-
-diff --git a/tests/test_configargparse.py b/tests/test_configargparse.py
-index e325afd..9718d86 100644
---- a/tests/test_configargparse.py
-+++ b/tests/test_configargparse.py
-@@ -1533,7 +1533,8 @@ def testYAMLConfigFileParser_w_ArgumentParser_parsed_values(self):
-     test_argparse_source_code = test_argparse_source_code.replace(
-         'argparse.ArgumentParser', 'configargparse.ArgumentParser').replace(
-         'TestHelpFormattingMetaclass', '_TestHelpFormattingMetaclass').replace(
--        'test_main', '_test_main')
-+        'test_main', '_test_main').replace(
-+        'test_exit_on_error', '_test_exit_on_error')
- 
-     # pytest tries to collect tests from TestHelpFormattingMetaclass, and
-     # test_main, and raises a warning when it finds it's not a test class
diff --git a/pkgs/development/python-modules/confluent-kafka/default.nix b/pkgs/development/python-modules/confluent-kafka/default.nix
index e4f6805921f5..7b19da5033d5 100644
--- a/pkgs/development/python-modules/confluent-kafka/default.nix
+++ b/pkgs/development/python-modules/confluent-kafka/default.nix
@@ -32,7 +32,7 @@
 
 buildPythonPackage rec {
   pname = "confluent-kafka";
-  version = "2.10.0";
+  version = "2.11.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -41,7 +41,7 @@ buildPythonPackage rec {
     owner = "confluentinc";
     repo = "confluent-kafka-python";
     tag = "v${version}";
-    hash = "sha256-JJSGYGM/ukEABgzlHbw8xJr1HKVm/EW6EXEIJQBSCt8=";
+    hash = "sha256-s4UeuFXieyUcFJsYHTaJBKfUssYZ7mt4YoHgXN7bZKI=";
   };
 
   buildInputs = [ rdkafka ];
@@ -101,12 +101,15 @@ buildPythonPackage rec {
     "tests/integration/"
     "tests/test_Admin.py"
     "tests/test_misc.py"
+    # Failed: async def functions are not natively supported.
+    "tests/schema_registry/_async"
     # missing cel-python dependency
-    "tests/schema_registry/test_avro_serdes.py"
-    "tests/schema_registry/test_json_serdes.py"
-    "tests/schema_registry/test_proto_serdes.py"
+    "tests/schema_registry/_sync/test_avro_serdes.py"
+    "tests/schema_registry/_sync/test_json_serdes.py"
+    "tests/schema_registry/_sync/test_proto_serdes.py"
     # missing tink dependency
-    "tests/schema_registry/test_config.py"
+    "tests/schema_registry/_async/test_config.py"
+    "tests/schema_registry/_sync/test_config.py"
     # crashes the test runner on shutdown
     "tests/test_KafkaError.py"
   ];
diff --git a/pkgs/development/python-modules/cons/default.nix b/pkgs/development/python-modules/cons/default.nix
index 2bf66255fd27..14c4c08d0b13 100644
--- a/pkgs/development/python-modules/cons/default.nix
+++ b/pkgs/development/python-modules/cons/default.nix
@@ -6,24 +6,28 @@
   py,
   pytestCheckHook,
   pytest-html,
-  pythonOlder,
+  setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "cons";
-  version = "0.4.6";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "0.4.7";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pythological";
     repo = "python-cons";
     tag = "v${version}";
-    hash = "sha256-XssERKiv4A8x7dZhLeFSciN6RCEfGs0or3PAQiYSPII=";
+    hash = "sha256-BS7lThnv+dxtztvw2aRhQa8yx2cRfrZLiXjcwvZ8QR0=";
   };
 
-  propagatedBuildInputs = [ logical-unification ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  dependencies = [ logical-unification ];
 
   nativeCheckInputs = [
     py
@@ -41,7 +45,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Implementation of Lisp/Scheme-like cons in Python";
     homepage = "https://github.com/pythological/python-cons";
-    changelog = "https://github.com/pythological/python-cons/releases/tag/v${version}";
+    changelog = "https://github.com/pythological/python-cons/releases/tag/${src.tag}";
     license = licenses.gpl3Only;
     maintainers = with maintainers; [ Etjean ];
   };
diff --git a/pkgs/development/python-modules/contourpy/default.nix b/pkgs/development/python-modules/contourpy/default.nix
index 3215238120ff..d85e5f8dfbdf 100644
--- a/pkgs/development/python-modules/contourpy/default.nix
+++ b/pkgs/development/python-modules/contourpy/default.nix
@@ -31,7 +31,7 @@
 let
   contourpy = buildPythonPackage rec {
     pname = "contourpy";
-    version = "1.3.2";
+    version = "1.3.3";
     format = "pyproject";
 
     disabled = pythonOlder "3.8";
@@ -40,7 +40,7 @@ let
       owner = "contourpy";
       repo = "contourpy";
       tag = "v${version}";
-      hash = "sha256-mtD54KfCm1vNBjcGuAKqRpKF+FLy3WmTYo7FLoE01QY=";
+      hash = "sha256-/tE+F1wH7YkqfgenXwtcfkjxUR5FwfgoS4NYC6n+/2M=";
     };
 
     # prevent unnecessary references to the build python when cross compiling
@@ -92,7 +92,7 @@ let
     '';
 
     meta = with lib; {
-      changelog = "https://github.com/contourpy/contourpy/releases/tag/v${version}";
+      changelog = "https://github.com/contourpy/contourpy/releases/tag/${src.tag}";
       description = "Python library for calculating contours in 2D quadrilateral grids";
       homepage = "https://github.com/contourpy/contourpy";
       license = licenses.bsd3;
diff --git a/pkgs/development/python-modules/control/default.nix b/pkgs/development/python-modules/control/default.nix
index e7f449273b62..16bb10a94ea0 100644
--- a/pkgs/development/python-modules/control/default.nix
+++ b/pkgs/development/python-modules/control/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "control";
-  version = "0.10.1";
+  version = "0.10.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python-control";
     repo = "python-control";
     tag = version;
-    hash = "sha256-wLDYPuLnsZ2+cXf7j3BxUbn4IjHPt09LE9cjQGXWrO0=";
+    hash = "sha256-E9RZDUK01hzjutq83XdLr3d97NwjmQzt65hqVg2TBGE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/copier/default.nix b/pkgs/development/python-modules/copier/default.nix
index 0ec4b1471609..74fe3d969934 100644
--- a/pkgs/development/python-modules/copier/default.nix
+++ b/pkgs/development/python-modules/copier/default.nix
@@ -6,6 +6,8 @@
   fetchFromGitHub,
   funcy,
   git,
+  hatchling,
+  hatch-vcs,
   iteration-utilities,
   jinja2,
   jinja2-ansible-filters,
@@ -17,8 +19,6 @@
   packaging,
   pathspec,
   plumbum,
-  poetry-core,
-  poetry-dynamic-versioning,
   pydantic,
   pygments,
   pyyaml,
@@ -28,7 +28,7 @@
 
 buildPythonPackage rec {
   pname = "copier";
-  version = "9.6.0";
+  version = "9.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
@@ -39,14 +39,14 @@ buildPythonPackage rec {
     postFetch = ''
       rm $out/tests/demo/doc/ma*ana.txt
     '';
-    hash = "sha256-mezmXrOvfqbZGZadNZklQZt/OEKqRYnwugNkZc88t6o=";
+    hash = "sha256-J+8MSlVKJb6Dr48pgy2OCBZpctGsVm23BcV4B9nk7o4=";
   };
 
   POETRY_DYNAMIC_VERSIONING_BYPASS = version;
 
   build-system = [
-    poetry-core
-    poetry-dynamic-versioning
+    hatchling
+    hatch-vcs
   ];
 
   dependencies = [
@@ -77,7 +77,7 @@ buildPythonPackage rec {
   meta = {
     description = "Library and command-line utility for rendering projects templates";
     homepage = "https://copier.readthedocs.io";
-    changelog = "https://github.com/copier-org/copier/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/copier-org/copier/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ greg ];
     mainProgram = "copier";
diff --git a/pkgs/development/python-modules/coredis/default.nix b/pkgs/development/python-modules/coredis/default.nix
index 1ed84d1ceb43..c3bd2b0f1859 100644
--- a/pkgs/development/python-modules/coredis/default.nix
+++ b/pkgs/development/python-modules/coredis/default.nix
@@ -1,6 +1,7 @@
 {
   lib,
   async-timeout,
+  beartype,
   buildPythonPackage,
   setuptools,
   versioneer,
@@ -18,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "coredis";
-  version = "4.24.0";
+  version = "5.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "alisaifee";
     repo = "coredis";
     tag = version;
-    hash = "sha256-vqgxj366x+TphGxUBXUHJpEM0zAdr6Ia4pDPKGWUx14=";
+    hash = "sha256-LDK/tVGBsuhf0WzGjdCJznUVh9vrtRrjtU0wKpsr/Ag=";
   };
 
   postPatch = ''
@@ -44,6 +45,7 @@ buildPythonPackage rec {
 
   dependencies = [
     async-timeout
+    beartype
     deprecated
     packaging
     pympler
diff --git a/pkgs/development/python-modules/coverage/default.nix b/pkgs/development/python-modules/coverage/default.nix
index f9b863a8cc0b..06eb295484f3 100644
--- a/pkgs/development/python-modules/coverage/default.nix
+++ b/pkgs/development/python-modules/coverage/default.nix
@@ -15,22 +15,16 @@
 
 buildPythonPackage rec {
   pname = "coverage";
-  version = "7.8.2";
+  version = "7.10.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nedbat";
     repo = "coveragepy";
     tag = version;
-    hash = "sha256-PCMGxyG5zIc8iigi9BsuhyuyQindZnewqTgxErT/jHw=";
+    hash = "sha256-OXi5FCLcfhseNDerwHdsVHF31Jy+ZSz2RU05vqPxQis=";
   };
 
-  postPatch = ''
-    # don't write to Nix store
-    substituteInPlace tests/conftest.py \
-      --replace-fail 'if WORKER == "none":' "if False:"
-  '';
-
   build-system = [ setuptools ];
 
   optional-dependencies = {
diff --git a/pkgs/development/python-modules/cppy/default.nix b/pkgs/development/python-modules/cppy/default.nix
index b0f48f69927d..14fc793caaba 100644
--- a/pkgs/development/python-modules/cppy/default.nix
+++ b/pkgs/development/python-modules/cppy/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "cppy";
-  version = "1.3.0";
+  version = "1.3.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "nucleic";
     repo = "cppy";
     tag = version;
-    hash = "sha256-RwwXwdjpq4ZjUyHkWoh3eaJDzIV3MargeoBJ+nTHsyg=";
+    hash = "sha256-/u9JQ2ivjSlBPodfAjeDmJ+HUu1rFZ58p3V5L2dy4Jk=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/craft-parts/default.nix b/pkgs/development/python-modules/craft-parts/default.nix
index cc5769fa57bd..c675d3d4834f 100644
--- a/pkgs/development/python-modules/craft-parts/default.nix
+++ b/pkgs/development/python-modules/craft-parts/default.nix
@@ -31,7 +31,7 @@
 
 buildPythonPackage rec {
   pname = "craft-parts";
-  version = "2.19.0";
+  version = "2.20.0";
 
   pyproject = true;
 
@@ -39,7 +39,7 @@ buildPythonPackage rec {
     owner = "canonical";
     repo = "craft-parts";
     tag = version;
-    hash = "sha256-qzaQW+bKq+sDjRsDDY5oYQWMX50rEskgxyKwhLpFpt4=";
+    hash = "sha256-apuAV17IlxbkaQvCzyqEhQwTYvqHibwvWHUEPYUiCJQ=";
   };
 
   patches = [ ./bash-path.patch ];
diff --git a/pkgs/development/python-modules/crccheck/default.nix b/pkgs/development/python-modules/crccheck/default.nix
index 0964aa45f5c5..b822ef875f06 100644
--- a/pkgs/development/python-modules/crccheck/default.nix
+++ b/pkgs/development/python-modules/crccheck/default.nix
@@ -2,27 +2,31 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  isPy3k,
   unittestCheckHook,
+  setuptools,
+  setuptools-scm,
 }:
 
 let
   pname = "crccheck";
-  version = "1.3.0";
+  version = "1.3.1";
 in
 buildPythonPackage {
   inherit pname version;
-  format = "setuptools";
-
-  disabled = !isPy3k;
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "MartinScharrer";
     repo = "crccheck";
     tag = "v${version}";
-    hash = "sha256-nujt3RWupvCtk7gORejtSwqqVjW9VwztOVGXBHW9T+k=";
+    hash = "sha256-hT+8+moni7turn5MK719b4Xy336htyWWmoMnhgxKkYo=";
   };
 
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
   nativeCheckInputs = [ unittestCheckHook ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/cupy/default.nix b/pkgs/development/python-modules/cupy/default.nix
index a8f0cde1f0ca..719a23037325 100644
--- a/pkgs/development/python-modules/cupy/default.nix
+++ b/pkgs/development/python-modules/cupy/default.nix
@@ -58,7 +58,7 @@ let
 in
 buildPythonPackage rec {
   pname = "cupy";
-  version = "13.3.0";
+  version = "13.5.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -69,7 +69,7 @@ buildPythonPackage rec {
     owner = "cupy";
     repo = "cupy";
     tag = "v${version}";
-    hash = "sha256-eQZwOGCaWZ4b0JCHZlrPHVQVXQwSkibHb02j0czAMt8=";
+    hash = "sha256-8RgyvsU3lnt6nO0J1tiLBOdYsX0jJkjPH/SpKQz4o7s=";
     fetchSubmodules = true;
   };
 
@@ -126,7 +126,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "NumPy-compatible matrix library accelerated by CUDA";
     homepage = "https://cupy.chainer.org/";
-    changelog = "https://github.com/cupy/cupy/releases/tag/v${version}";
+    changelog = "https://github.com/cupy/cupy/releases/tag/${src.tag}";
     license = licenses.mit;
     platforms = [
       "aarch64-linux"
diff --git a/pkgs/development/python-modules/curio/default.nix b/pkgs/development/python-modules/curio/default.nix
index 1806677f2483..8e30e56018dd 100644
--- a/pkgs/development/python-modules/curio/default.nix
+++ b/pkgs/development/python-modules/curio/default.nix
@@ -38,6 +38,7 @@ buildPythonPackage rec {
     "test_ssl_outgoing" # touches network
     "test_unix_echo" # socket bind error on hydra when built with other packages
     "test_unix_ssl_server" # socket bind error on hydra when built with other packages
+    "test_task_group_thread" # stuck
   ]
   ++ lib.optionals stdenv.hostPlatform.isDarwin [
     # connects to python.org:1, expects an OsError, hangs in the darwin sandbox
diff --git a/pkgs/development/python-modules/curl-cffi/default.nix b/pkgs/development/python-modules/curl-cffi/default.nix
index 6294177d069e..79db35a65e95 100644
--- a/pkgs/development/python-modules/curl-cffi/default.nix
+++ b/pkgs/development/python-modules/curl-cffi/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "curl-cffi";
-  version = "0.11.1";
+  version = "0.12.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lexiforest";
     repo = "curl_cffi";
     tag = "v${version}";
-    hash = "sha256-hpsAga5741oTBT87Rt7XTyxxu7SQ5Usw+2VVr54oA8k=";
+    hash = "sha256-VE/b1Cs/wpZlu7lOURT/QfP7DuNudD441zG603LT4LM=";
   };
 
   patches = [ ./use-system-libs.patch ];
diff --git a/pkgs/development/python-modules/cvss/default.nix b/pkgs/development/python-modules/cvss/default.nix
index 791bd43df9fe..c348337e0cca 100644
--- a/pkgs/development/python-modules/cvss/default.nix
+++ b/pkgs/development/python-modules/cvss/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "cvss";
-  version = "3.4";
+  version = "3.6";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "RedHatProductSecurity";
     repo = "cvss";
     tag = "v${version}";
-    hash = "sha256-g6+ccoIgqs7gZPrTuKm3em+PzLvpupb9JXOGMqf2Uv0=";
+    hash = "sha256-udUs76wfvC9LfjlKyWmuPV0RT2P/COTwYw3hgDt3tPs=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/cyclonedx-python-lib/default.nix b/pkgs/development/python-modules/cyclonedx-python-lib/default.nix
index 140adeda4e8d..2b3b5c5c27b8 100644
--- a/pkgs/development/python-modules/cyclonedx-python-lib/default.nix
+++ b/pkgs/development/python-modules/cyclonedx-python-lib/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "cyclonedx-python-lib";
-  version = "8.8.0";
+  version = "11.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "CycloneDX";
     repo = "cyclonedx-python-lib";
     tag = "v${version}";
-    hash = "sha256-igT1QroP260cqSAiaJv4Zrji691WIjyDLZ1p5dtPF5Y=";
+    hash = "sha256-TS/3O/ojabMUUW8RVd1ymo67rjNoRCtrIqZcUygpW+Y=";
   };
 
   pythonRelaxDeps = [ "py-serializable" ];
diff --git a/pkgs/development/python-modules/cynthion/default.nix b/pkgs/development/python-modules/cynthion/default.nix
index 1d265c8da52d..f0d8d55b6c94 100644
--- a/pkgs/development/python-modules/cynthion/default.nix
+++ b/pkgs/development/python-modules/cynthion/default.nix
@@ -26,14 +26,14 @@
 }:
 buildPythonPackage rec {
   pname = "cynthion";
-  version = "0.2.2";
+  version = "0.2.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "greatscottgadgets";
     repo = "cynthion";
     tag = version;
-    hash = "sha256-xL1/ckX+xKUQpugQkLB3SlZeNcBEaTMascTgoQ4C+hA=";
+    hash = "sha256-NAsELeOnWgMa6iWCJ0+hpbHIO3BsZBv0N/nK1XP+IpU=";
   };
 
   sourceRoot = "${src.name}/cynthion/python";
diff --git a/pkgs/development/python-modules/cython/default.nix b/pkgs/development/python-modules/cython/default.nix
index 45fc174577ae..f62acbab3b90 100644
--- a/pkgs/development/python-modules/cython/default.nix
+++ b/pkgs/development/python-modules/cython/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "cython";
-  version = "3.0.12";
+  version = "3.1.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "cython";
     repo = "cython";
     tag = version;
-    hash = "sha256-clJXjQb6rVECirKRUGX0vD5a6LILzPwNo7+6KKYs2pI=";
+    hash = "sha256-lP8ILCzAZuoPzFhCqGXwIpifN8XoWz93SJ7c3XVe69Y=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/dash/default.nix b/pkgs/development/python-modules/dash/default.nix
index 3f185c962a25..953eb9064a74 100644
--- a/pkgs/development/python-modules/dash/default.nix
+++ b/pkgs/development/python-modules/dash/default.nix
@@ -36,14 +36,14 @@
 
 buildPythonPackage rec {
   pname = "dash";
-  version = "3.0.4";
+  version = "3.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "plotly";
     repo = "dash";
     tag = "v${version}";
-    hash = "sha256-KCGVdD1L+U2KbktU2GU19BQ6wRcmEeYtC/v8UrFTyto=";
+    hash = "sha256-7wSUPAcPvY5Q5Ws2mLjiY599oZlo5SA6Pa8QnS7pgvg=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/dask/default.nix b/pkgs/development/python-modules/dask/default.nix
index 9322d3c03aba..fd60adb945d1 100644
--- a/pkgs/development/python-modules/dask/default.nix
+++ b/pkgs/development/python-modules/dask/default.nix
@@ -38,14 +38,14 @@
 
 buildPythonPackage rec {
   pname = "dask";
-  version = "2025.3.0";
+  version = "2025.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "dask";
     repo = "dask";
     tag = version;
-    hash = "sha256-j25+DfWReonXKqxkX9OVHjKo+Indh13rlBE5PyGe69c=";
+    hash = "sha256-bwM4Q95YTEp9pDz6LmBLOeYjmi8nH8Cc/srZlXfEIlg=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/databricks-sql-connector/default.nix b/pkgs/development/python-modules/databricks-sql-connector/default.nix
index 9d4689b5f147..f351e8d0b03b 100644
--- a/pkgs/development/python-modules/databricks-sql-connector/default.nix
+++ b/pkgs/development/python-modules/databricks-sql-connector/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "databricks-sql-connector";
-  version = "4.0.3";
+  version = "4.0.5";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -29,10 +29,11 @@ buildPythonPackage rec {
     owner = "databricks";
     repo = "databricks-sql-python";
     tag = "v${version}";
-    hash = "sha256-9+U5XOlvPQF6fLkT6/bgjSqSlGj0995mNVH0PCGQEYE=";
+    hash = "sha256-CzS6aVOFkBSJ9+0KJOaJLxK2ZiRY4OybNkCX5VdybqY=";
   };
 
   pythonRelaxDeps = [
+    "pandas"
     "pyarrow"
     "thrift"
   ];
diff --git a/pkgs/development/python-modules/datamodel-code-generator/default.nix b/pkgs/development/python-modules/datamodel-code-generator/default.nix
index f4a8c4377666..114c02db162a 100644
--- a/pkgs/development/python-modules/datamodel-code-generator/default.nix
+++ b/pkgs/development/python-modules/datamodel-code-generator/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "datamodel-code-generator";
-  version = "0.26.5";
+  version = "0.32.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "koxudaxi";
     repo = "datamodel-code-generator";
     tag = version;
-    hash = "sha256-CYNEpQFIWR7i7I7YJ5q/34KNhtQ7cjya97Z0fyeO5g8=";
+    hash = "sha256-sFMNs8wHRTxK1TU4IWfbKf/qUCb11bh2Td1/FngFavo=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/datasalad/default.nix b/pkgs/development/python-modules/datasalad/default.nix
index 0e0eaacbea2f..9ea994007bed 100644
--- a/pkgs/development/python-modules/datasalad/default.nix
+++ b/pkgs/development/python-modules/datasalad/default.nix
@@ -4,6 +4,7 @@
   hatchling,
   hatch-vcs,
   lib,
+  gitMinimal,
   more-itertools,
   psutil,
   pytestCheckHook,
@@ -12,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "datasalad";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "datalad";
     repo = "datasalad";
     tag = "v${version}";
-    hash = "sha256-UIrbvFz674+HarFbv1eF++flj1hOR0cZyqKQSl+G7xY=";
+    hash = "sha256-v0qq9uzO2nD2RZ9LlmBzs3OOAriylrq9mcmgpDga4gw=";
   };
 
   build-system = [
@@ -28,6 +29,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    gitMinimal
     pytestCheckHook
     more-itertools
     psutil
diff --git a/pkgs/development/python-modules/datasets/default.nix b/pkgs/development/python-modules/datasets/default.nix
index 49e474a53b49..7986fe8ff6bb 100644
--- a/pkgs/development/python-modules/datasets/default.nix
+++ b/pkgs/development/python-modules/datasets/default.nix
@@ -19,14 +19,14 @@
 }:
 buildPythonPackage rec {
   pname = "datasets";
-  version = "3.6.0";
+  version = "4.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = "datasets";
     tag = version;
-    hash = "sha256-/xhu0cDKfCEwrp9IzKd0+AeQky1198f9sba/pdutvAk=";
+    hash = "sha256-Cr25PgLNGX/KcFZE5h1oiaDW9J50ccMqA5z3q4sITus=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/dateparser/default.nix b/pkgs/development/python-modules/dateparser/default.nix
index 5fd9a6d5f6d3..a874c2575860 100644
--- a/pkgs/development/python-modules/dateparser/default.nix
+++ b/pkgs/development/python-modules/dateparser/default.nix
@@ -8,7 +8,7 @@
   pytz,
   regex,
   tzlocal,
-  hijri-converter,
+  hijridate,
   convertdate,
   fasttext,
   langdetect,
@@ -46,7 +46,7 @@ buildPythonPackage rec {
 
   optional-dependencies = {
     calendars = [
-      hijri-converter
+      hijridate
       convertdate
     ];
     fasttext = [ fasttext ];
diff --git a/pkgs/development/python-modules/dazl/default.nix b/pkgs/development/python-modules/dazl/default.nix
index ee74e5e21878..be4ac05588ff 100644
--- a/pkgs/development/python-modules/dazl/default.nix
+++ b/pkgs/development/python-modules/dazl/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "dazl";
-  version = "8.3.0";
+  version = "8.4.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "digital-asset";
     repo = "dazl-client";
     tag = "v${version}";
-    hash = "sha256-w0jWhOOjOVLKUcfY2zR8dgckp7r/Gko+p3cuO8IIrM4=";
+    hash = "sha256-NJHcjzdtKTUnFideUm4fHof4A16nEFeYIXehR9/Bn1s=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/db-dtypes/default.nix b/pkgs/development/python-modules/db-dtypes/default.nix
index 5c17b49c2b03..23713484c397 100644
--- a/pkgs/development/python-modules/db-dtypes/default.nix
+++ b/pkgs/development/python-modules/db-dtypes/default.nix
@@ -6,14 +6,14 @@
   packaging,
   pandas,
   pyarrow,
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonOlder,
   setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "db-dtypes";
-  version = "1.4.2";
+  version = "1.4.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "googleapis";
     repo = "python-db-dtypes-pandas";
     tag = "v${version}";
-    hash = "sha256-CW8BgUZu6EGOXEwapwXadjySbzlo8j9I8ft7OuSMVqs=";
+    hash = "sha256-AyO/GwtExMWi4mB3OMtYPFvAVS/ylcBXGiGXgaScyCA=";
   };
 
   build-system = [ setuptools ];
@@ -34,7 +34,14 @@ buildPythonPackage rec {
     pyarrow
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest8_3CheckHook ];
+
+  disabledTests = [
+    # ValueError: Unable to avoid copy while creating an array as requested.
+    "test_array_interface_copy"
+    # Failed: DID NOT RAISE <class 'TypeError'>
+    "test_reduce_series_numeric"
+  ];
 
   pythonImportsCheck = [ "db_dtypes" ];
 
diff --git a/pkgs/development/python-modules/dbt-adapters/default.nix b/pkgs/development/python-modules/dbt-adapters/default.nix
index a142a26f0026..ca491b9afbbe 100644
--- a/pkgs/development/python-modules/dbt-adapters/default.nix
+++ b/pkgs/development/python-modules/dbt-adapters/default.nix
@@ -3,6 +3,7 @@
   agate,
   buildPythonPackage,
   dbt-common,
+  dbt-protos,
   fetchPypi,
   hatchling,
   mashumaro,
@@ -14,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "dbt-adapters";
-  version = "1.14.8";
+  version = "1.16.3";
   pyproject = true;
 
   # missing tags on GitHub
   src = fetchPypi {
     pname = "dbt_adapters";
     inherit version;
-    hash = "sha256-lowoP5Ny5kObKMuscecSUuqQXG7GxEDlbp8HQkLifBc=";
+    hash = "sha256-1J0+V776ujbt8Anm/gAdld0MkC5apmeN8IEtzZBSWf8=";
   };
 
   build-system = [ hatchling ];
@@ -34,6 +35,7 @@ buildPythonPackage rec {
   dependencies = [
     agate
     dbt-common
+    dbt-protos
     mashumaro
     protobuf
     pytz
diff --git a/pkgs/development/python-modules/dbt-core/default.nix b/pkgs/development/python-modules/dbt-core/default.nix
index 2f6937cda7f2..4fd76d96d919 100644
--- a/pkgs/development/python-modules/dbt-core/default.nix
+++ b/pkgs/development/python-modules/dbt-core/default.nix
@@ -13,6 +13,7 @@
   dbt-adapters,
   dbt-common,
   dbt-extractor,
+  dbt-protos,
   dbt-semantic-interfaces,
   jinja2,
   logbook,
@@ -36,23 +37,16 @@
 
 buildPythonPackage rec {
   pname = "dbt-core";
-  version = "1.10.0b2";
+  version = "1.10.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "dbt-labs";
     repo = "dbt-core";
     tag = "v${version}";
-    hash = "sha256-MTrdpbPqdakFDmLKRFJ23u9hLgGhZ5T+r4om9HPBjkw=";
+    hash = "sha256-tMrtn5NYkRpok6mv4/CBXGPQuHWpL/raejPXyagj7Bs=";
   };
 
-  postPatch = ''
-    substituteInPlace dbt/utils/artifact_upload.py \
-      --replace-fail \
-        "from pydantic import BaseSettings" \
-        "from pydantic_settings import BaseSettings"
-  '';
-
   sourceRoot = "${src.name}/core";
 
   pythonRelaxDeps = [
@@ -80,6 +74,7 @@ buildPythonPackage rec {
     dbt-adapters
     dbt-common
     dbt-extractor
+    dbt-protos
     dbt-semantic-interfaces
     jinja2
     logbook
diff --git a/pkgs/development/python-modules/dbt-protos/default.nix b/pkgs/development/python-modules/dbt-protos/default.nix
new file mode 100644
index 000000000000..c3601a48b7d6
--- /dev/null
+++ b/pkgs/development/python-modules/dbt-protos/default.nix
@@ -0,0 +1,39 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  setuptools,
+  protobuf,
+}:
+
+buildPythonPackage rec {
+  pname = "dbt-protos";
+  version = "1.0.351";
+  pyproject = true;
+
+  src = fetchFromGitHub {
+    owner = "dbt-labs";
+    repo = "proto-python-public";
+    tag = "v${version}";
+    hash = "sha256-GZwSJAElE/aUS4cCqMlmUJVtm+OACjKakXUxkrpVUyE=";
+  };
+
+  build-system = [
+    setuptools
+  ];
+
+  dependencies = [
+    protobuf
+  ];
+
+  pythonImportsCheck = [
+    "dbtlabs.proto.public.v1"
+  ];
+
+  meta = {
+    description = "dbt public protos";
+    homepage = "https://github.com/dbt-labs/proto-python-public";
+    license = lib.licenses.asl20;
+    maintainers = with lib.maintainers; [ ];
+  };
+}
diff --git a/pkgs/development/python-modules/dbus-fast/default.nix b/pkgs/development/python-modules/dbus-fast/default.nix
index 6a1d1b2b10f0..2a2a171502c7 100644
--- a/pkgs/development/python-modules/dbus-fast/default.nix
+++ b/pkgs/development/python-modules/dbus-fast/default.nix
@@ -29,6 +29,11 @@ buildPythonPackage rec {
     hash = "sha256-ZpTQjAmrLoenDWzd/0NpD7fqTd6Dv1J0Ks0db4twwYk=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "Cython>=3,<3.1.0" Cython
+  '';
+
   # The project can build both an optimized cython version and an unoptimized
   # python version. This ensures we fail if we build the wrong one.
   env.REQUIRE_CYTHON = 1;
diff --git a/pkgs/development/python-modules/dbutils/default.nix b/pkgs/development/python-modules/dbutils/default.nix
index 2995db09d4a6..e287ecb5caad 100644
--- a/pkgs/development/python-modules/dbutils/default.nix
+++ b/pkgs/development/python-modules/dbutils/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "dbutils";
-  version = "3.1.0";
+  version = "3.1.1";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "DBUtils";
-    hash = "sha256-6lKLoRBjJA7qgjRevG98yTJMBuQulCCwC80kWpW/zCQ=";
+    hash = "sha256-reefvFeG10ltQThyL7yiQ0DPfHO11m3wUpb2Vv8Ia78=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/deep-chainmap/default.nix b/pkgs/development/python-modules/deep-chainmap/default.nix
index 9b3c6c9ac240..1b12d8bd9d56 100644
--- a/pkgs/development/python-modules/deep-chainmap/default.nix
+++ b/pkgs/development/python-modules/deep-chainmap/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "deep-chainmap";
-  version = "0.1.2";
+  version = "0.1.3";
   pyproject = true;
 
   src = fetchPypi {
     pname = "deep_chainmap";
     inherit version;
-    hash = "sha256-R7Pfh+1bYJ7LCU+0SyZi2XGOsgL1zWiMkp1z9HD1I1w=";
+    hash = "sha256-Cw6Eiey501mzeigfdwnMuZH28abG4rcoACUGlmkzECA=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/deepface/default.nix b/pkgs/development/python-modules/deepface/default.nix
index f6984e4da51b..cc877c8d8ea9 100644
--- a/pkgs/development/python-modules/deepface/default.nix
+++ b/pkgs/development/python-modules/deepface/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "deepface";
-  version = "0.0.93";
+  version = "0.0.94";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "serengil";
     repo = "deepface";
     tag = "v${version}";
-    hash = "sha256-G/e0tvf4GbXPjqJCTMgWDe59701fxfrtAf+bioEn8io=";
+    hash = "sha256-jtDj1j2STjoEW6MdQai6ZuRYVmLo0Ga+VPJ01105Byc=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/defcon/default.nix b/pkgs/development/python-modules/defcon/default.nix
index 06efc8018d32..4c9beacba974 100644
--- a/pkgs/development/python-modules/defcon/default.nix
+++ b/pkgs/development/python-modules/defcon/default.nix
@@ -11,15 +11,14 @@
 
 buildPythonPackage rec {
   pname = "defcon";
-  version = "0.12.1";
+  version = "0.12.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-rKhnSo9xcjr2oI8zLz7TFWug/gBZHrWv91csqtFHLQk=";
-    extension = "zip";
+    hash = "sha256-Jd/n/QFSzPKSyxkNGSikfViImcILBGhUKT4DnhyT5eA=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/dep-logic/default.nix b/pkgs/development/python-modules/dep-logic/default.nix
index c85fc1b95e29..845203c5d99f 100644
--- a/pkgs/development/python-modules/dep-logic/default.nix
+++ b/pkgs/development/python-modules/dep-logic/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "dep-logic";
-  version = "0.5.1";
+  version = "0.5.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "pdm-project";
     repo = "dep-logic";
     tag = version;
-    hash = "sha256-W/y5iM9dHnle7y3VzqvW7DSGy8ALvjqt5CN/2z5oEi8=";
+    hash = "sha256-BjqPtfYsHSDQoaYs+hB0r/mRuONqBHOb6goi1dxkFWo=";
   };
 
   nativeBuildInputs = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/dependency-groups/default.nix b/pkgs/development/python-modules/dependency-groups/default.nix
new file mode 100644
index 000000000000..6bfbe3e79977
--- /dev/null
+++ b/pkgs/development/python-modules/dependency-groups/default.nix
@@ -0,0 +1,53 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  flit-core,
+  packaging,
+  pytestCheckHook,
+  tomli,
+}:
+
+buildPythonPackage rec {
+  pname = "dependency-groups";
+  version = "1.3.1";
+  pyproject = true;
+
+  src = fetchFromGitHub {
+    owner = "pypa";
+    repo = "dependency-groups";
+    tag = version;
+    hash = "sha256-suuSx3zf0Y45FJdH8Cb6N7hcvPnzleREpHhtdiG2CLg=";
+  };
+
+  build-system = [
+    flit-core
+  ];
+
+  dependencies = [
+    packaging
+    tomli
+  ];
+
+  optional-dependencies = {
+    cli = [
+      tomli
+    ];
+  };
+
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
+
+  pythonImportsCheck = [
+    "dependency_groups"
+  ];
+
+  meta = {
+    description = "A standalone implementation of PEP 735 Dependency Groups";
+    homepage = "https://github.com/pypa/dependency-groups";
+    changelog = "https://github.com/pypa/dependency-groups/blob/${src.tag}/CHANGELOG.rst";
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [ hexa ];
+  };
+}
diff --git a/pkgs/development/python-modules/dependency-injector/default.nix b/pkgs/development/python-modules/dependency-injector/default.nix
index cd48ac472e5e..54154d299104 100644
--- a/pkgs/development/python-modules/dependency-injector/default.nix
+++ b/pkgs/development/python-modules/dependency-injector/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "dependency-injector";
-  version = "4.42.0";
+  version = "4.48.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "ets-labs";
     repo = "python-dependency-injector";
     tag = version;
-    hash = "sha256-ryPNmiIKQzR4WSjt7hi4C+iTsYvfj5TYGy+9PJxX+10=";
+    hash = "sha256-jsV+PmUGtK8QiI2ga963H/gkd31UEq0SouEia+spSpg=";
   };
 
   build-system = [ setuptools ];
@@ -64,7 +64,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Dependency injection microframework for Python";
     homepage = "https://github.com/ets-labs/python-dependency-injector";
-    changelog = "https://github.com/ets-labs/python-dependency-injector/blob/${version}/docs/main/changelog.rst";
+    changelog = "https://github.com/ets-labs/python-dependency-injector/blob/${src.tag}/docs/main/changelog.rst";
     license = licenses.bsd3;
     maintainers = with maintainers; [ gerschtli ];
     # https://github.com/ets-labs/python-dependency-injector/issues/726
diff --git a/pkgs/development/python-modules/devolo-plc-api/default.nix b/pkgs/development/python-modules/devolo-plc-api/default.nix
index d9dcbbb73a3f..89f1bbb6853b 100644
--- a/pkgs/development/python-modules/devolo-plc-api/default.nix
+++ b/pkgs/development/python-modules/devolo-plc-api/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   httpx,
   protobuf,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-httpx,
   pytest-mock,
   pytestCheckHook,
@@ -48,7 +48,7 @@ buildPythonPackage rec {
   __darwinAllowLocalNetworking = true;
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-httpx
     pytest-mock
     pytestCheckHook
diff --git a/pkgs/development/python-modules/devpi-common/default.nix b/pkgs/development/python-modules/devpi-common/default.nix
index 7197be7d2336..99ddb9b692ef 100644
--- a/pkgs/development/python-modules/devpi-common/default.nix
+++ b/pkgs/development/python-modules/devpi-common/default.nix
@@ -15,15 +15,15 @@
 
 buildPythonPackage rec {
   pname = "devpi-common";
-  version = "4.0.4";
+  version = "4.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
-    pname = "devpi_common";
+    pname = "devpi-common";
     inherit version;
-    hash = "sha256-I1oKmkXJblTGC6a6L3fYVs+Q8aacG+6UmIfp7cA6Qcw=";
+    hash = "sha256-WNf3YeP+f9/kScSmqeI1DU3fvrZssPbSCAJRQpQwMNM=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/dicomweb-client/default.nix b/pkgs/development/python-modules/dicomweb-client/default.nix
index 0e886d8325b0..2d34fa5b8455 100644
--- a/pkgs/development/python-modules/dicomweb-client/default.nix
+++ b/pkgs/development/python-modules/dicomweb-client/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "dicomweb-client";
-  version = "0.59.3";
+  version = "0.60.1";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "ImagingDataCommons";
     repo = "dicomweb-client";
     tag = "v${version}";
-    hash = "sha256-D3j5EujrEdGTfR8/V3o2VJ/VkGdZ8IifPYMhP4ppXhw=";
+    hash = "sha256-ZxeZiCw8I5+Bf266PQ6WQA8mBRC7K3/kZrmuW4l6kQU=";
   };
 
   build-system = [ setuptools ];
@@ -47,7 +47,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python client for DICOMweb RESTful services";
     homepage = "https://dicomweb-client.readthedocs.io";
-    changelog = "https://github.com/ImagingDataCommons/dicomweb-client/releases/tag/v${version}";
+    changelog = "https://github.com/ImagingDataCommons/dicomweb-client/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ bcdarwin ];
     mainProgram = "dicomweb_client";
diff --git a/pkgs/development/python-modules/diofant/default.nix b/pkgs/development/python-modules/diofant/default.nix
index 696e8e4e63ad..0deaf22888cb 100644
--- a/pkgs/development/python-modules/diofant/default.nix
+++ b/pkgs/development/python-modules/diofant/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "diofant";
-  version = "0.14.0";
+  version = "0.15.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "diofant";
     repo = "diofant";
     tag = "v${version}";
-    hash = "sha256-+VM5JBj4NRhNwyAVhnsACg5cVyyxJ3IcOKNL1osr67E=";
+    hash = "sha256-uQvAYSURDhuAKcX0WVMk4y2ZXiiq0lPZct/7A5n5t34=";
   };
 
   patches = [
@@ -81,7 +81,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "diofant" ];
 
   meta = with lib; {
-    changelog = "https://diofant.readthedocs.io/en/latest/release/notes-${version}.html";
+    changelog = "https://diofant.readthedocs.io/en/latest/release/notes-${src.tag}.html";
     description = "Python CAS library";
     homepage = "https://github.com/diofant/diofant";
     license = licenses.bsd3;
diff --git a/pkgs/development/python-modules/discid/default.nix b/pkgs/development/python-modules/discid/default.nix
index 83cc31223521..75439108a15b 100644
--- a/pkgs/development/python-modules/discid/default.nix
+++ b/pkgs/development/python-modules/discid/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "discid";
-  version = "1.2.0";
+  version = "1.3.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1fc6kvnqwaz9lrs2qgsp8wh0nabf49010r0r53wnsmpmafy315nd";
+    sha256 = "sha256-cWChIRrD1qbYIT+4jdPXPjKr5eATNqWkyYWwgql9QzU=";
   };
 
   patchPhase =
diff --git a/pkgs/development/python-modules/dissect-fve/default.nix b/pkgs/development/python-modules/dissect-fve/default.nix
index d8ffe7bbd871..a7608a4012af 100644
--- a/pkgs/development/python-modules/dissect-fve/default.nix
+++ b/pkgs/development/python-modules/dissect-fve/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "dissect-fve";
-  version = "4.1";
+  version = "4.2";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "fox-it";
     repo = "dissect.fve";
     tag = version;
-    hash = "sha256-xPjwyI134E0JWkM+S2ae9TuBGHMSrgyjooM9CGECqgg=";
+    hash = "sha256-OgagTnt4y6Fzd7jbsCgbkTzcsdnozImfdKI9ew9JaqI=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/distlib/default.nix b/pkgs/development/python-modules/distlib/default.nix
index 0a636477ea7b..02e084b0f686 100644
--- a/pkgs/development/python-modules/distlib/default.nix
+++ b/pkgs/development/python-modules/distlib/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "distlib";
-  version = "0.3.9";
+  version = "0.4.0";
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pg8g3qZGuKM/Pndy903AstB3LSg37hNCoAZFyB7flAM=";
+    hash = "sha256-/uxAB1vgOgRQGpc9gfYzc1tLafmLBUUFkjEMD0AaTg0=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/distributed/default.nix b/pkgs/development/python-modules/distributed/default.nix
index 6f2bb78a106f..db117b6a05af 100644
--- a/pkgs/development/python-modules/distributed/default.nix
+++ b/pkgs/development/python-modules/distributed/default.nix
@@ -28,14 +28,14 @@
 
 buildPythonPackage rec {
   pname = "distributed";
-  version = "2025.3.0";
+  version = "2025.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "dask";
     repo = "distributed";
     tag = version;
-    hash = "sha256-+vegdEXhQi3ns5iMs6FavKnAlRNIWCUNyZENVBWZsuQ=";
+    hash = "sha256-np4hCamNTbnmLdfjFeHsxEEm9XI1O0kOczDe1YjSziw=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/dj-rest-auth/default.nix b/pkgs/development/python-modules/dj-rest-auth/default.nix
index a00c31ab7aed..5191ff624b78 100644
--- a/pkgs/development/python-modules/dj-rest-auth/default.nix
+++ b/pkgs/development/python-modules/dj-rest-auth/default.nix
@@ -81,6 +81,9 @@ buildPythonPackage rec {
   disabledTests = [
     # Test connects to graph.facebook.com
     "TestSocialLoginSerializer"
+    # claim[user_id] is "1" (str) vs 1 (int)
+    "test_custom_jwt_claims"
+    "test_custom_jwt_claims_cookie_w_authentication"
   ];
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/django-allauth/default.nix b/pkgs/development/python-modules/django-allauth/default.nix
index 3e1b6e31a42c..e710032e9006 100644
--- a/pkgs/development/python-modules/django-allauth/default.nix
+++ b/pkgs/development/python-modules/django-allauth/default.nix
@@ -2,11 +2,13 @@
   lib,
   buildPythonPackage,
   fetchFromGitea,
+  fetchpatch,
   pythonOlder,
   python,
 
   # build-system
   setuptools,
+  setuptools-scm,
 
   # build-time dependencies
   gettext,
@@ -41,7 +43,7 @@
 
 buildPythonPackage rec {
   pname = "django-allauth";
-  version = "65.9.0";
+  version = "65.10.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -51,12 +53,23 @@ buildPythonPackage rec {
     owner = "allauth";
     repo = "django-allauth";
     tag = version;
-    hash = "sha256-gusA9TnsgSSnWBPwHsNYeESD9nX5DWh4HqMgcsoJRw0=";
+    hash = "sha256-pwWrdWk3bARM4dKbEnUWXuyjw/rTcOjk3YXowDa+Hm8=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "dj-rest-auth-compat.patch";
+      url = "https://github.com/pennersr/django-allauth/commit/d50a9b09bada6753b52e52571d0830d837dc08ee.patch";
+      hash = "sha256-cFj9HEAlAITbRcR23ptzUYamoLmdtFEUVkDtv4+BBY0=";
+    })
+  ];
+
   nativeBuildInputs = [ gettext ];
 
-  build-system = [ setuptools ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   dependencies = [
     asgiref
diff --git a/pkgs/development/python-modules/django-auditlog/default.nix b/pkgs/development/python-modules/django-auditlog/default.nix
index 4b488a328ae8..80af50656ca1 100644
--- a/pkgs/development/python-modules/django-auditlog/default.nix
+++ b/pkgs/development/python-modules/django-auditlog/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "django-auditlog";
-  version = "3.1.2";
+  version = "3.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jazzband";
     repo = "django-auditlog";
     tag = "v${version}";
-    hash = "sha256-xb6pTsXkB8HVpXvB9WzBUlRcjh5cn1CdmMYQQVCQ/GU=";
+    hash = "sha256-NOtpnYh6HUo7VRSyCUhbpNDv0V9KWST0OEzl7Pt6eR8=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/django-cachalot/default.nix b/pkgs/development/python-modules/django-cachalot/default.nix
index 3b83eb8f6a16..4c6c85a46d67 100644
--- a/pkgs/development/python-modules/django-cachalot/default.nix
+++ b/pkgs/development/python-modules/django-cachalot/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "django-cachalot";
-  version = "2.7.0";
+  version = "2.8.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "noripyt";
     repo = "django-cachalot";
     tag = "v${version}";
-    hash = "sha256-Fi5UvqH2bVb4v/GWDkEYIcBMBVos+35g4kcEnZTOQvw=";
+    hash = "sha256-3W+9cULL3mMtAkxbqetoIj2FL/HRbzWHIDMe9O1e6BM=";
   };
 
   patches = [
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "No effort, no worry, maximum performance";
     homepage = "https://github.com/noripyt/django-cachalot";
-    changelog = "https://github.com/noripyt/django-cachalot/blob/${src.rev}/CHANGELOG.rst";
+    changelog = "https://github.com/noripyt/django-cachalot/blob/${src.tag}/CHANGELOG.rst";
     license = licenses.bsd3;
     maintainers = with maintainers; [ onny ];
   };
diff --git a/pkgs/development/python-modules/django-cms/default.nix b/pkgs/development/python-modules/django-cms/default.nix
index a33caa7b8024..ca3034af5512 100644
--- a/pkgs/development/python-modules/django-cms/default.nix
+++ b/pkgs/development/python-modules/django-cms/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "django-cms";
-  version = "4.1.6";
+  version = "5.0.2";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -30,24 +30,9 @@ buildPythonPackage rec {
     owner = "django-cms";
     repo = "django-cms";
     tag = version;
-    hash = "sha256-KowhiJz84hR5VqW+WNIBEhC+X9zPE1opDWygFfsFfPE=";
+    hash = "sha256-qv6eVs5jKJXQczEa6+H5n4+pw1JFTkb7XJD+0DBVFM0=";
   };
 
-  patches = [
-    # Removed django-app-manage dependency by updating ./manage.py
-    # https://github.com/django-cms/django-cms/pull/8061
-    (fetchpatch {
-      url = "https://github.com/django-cms/django-cms/commit/3270edb72f6a736b5cb448864ce2eaf68f061740.patch";
-      hash = "sha256-DkgAfE/QGAXwKMNvgcYxtO0yAc7oAaAAui2My8ml1Vk=";
-      name = "remove_django_app_manage_dependency.patch";
-    })
-    (fetchpatch {
-      url = "https://github.com/django-cms/django-cms/pull/8061/commits/04005ff693e775db645c62fefbb62367822e66f9.patch";
-      hash = "sha256-4M/VKEv7pnqCk6fDyA6FurSCCu/k9tNnz16wT4Tr0Rw=";
-      name = "manage_py_update_dj_database_url.patch";
-    })
-  ];
-
   build-system = [ setuptools ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/django-csp/default.nix b/pkgs/development/python-modules/django-csp/default.nix
index 5c5920404fbc..70ec6444eee8 100644
--- a/pkgs/development/python-modules/django-csp/default.nix
+++ b/pkgs/development/python-modules/django-csp/default.nix
@@ -17,13 +17,13 @@
 
 buildPythonPackage rec {
   pname = "django-csp";
-  version = "3.8";
+  version = "4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit version;
     pname = "django_csp";
-    hash = "sha256-7w8an32Nporm4WnALprGYcDs8E23Dg0dhWQFEqaEccA=";
+    hash = "sha256-snAQu3Ausgo9rTKReN8rYaK4LTOLcPvcE8OjvShxKDM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/django-debug-toolbar/default.nix b/pkgs/development/python-modules/django-debug-toolbar/default.nix
index e7820589c481..a497e80beb69 100644
--- a/pkgs/development/python-modules/django-debug-toolbar/default.nix
+++ b/pkgs/development/python-modules/django-debug-toolbar/default.nix
@@ -16,13 +16,11 @@
   html5lib,
   jinja2,
   pygments,
-  pytest-django,
-  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "django-debug-toolbar";
-  version = "5.0.1";
+  version = "6.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -31,9 +29,14 @@ buildPythonPackage rec {
     owner = "jazzband";
     repo = "django-debug-toolbar";
     tag = version;
-    hash = "sha256-Q0joSIFXhoVmNQ+AfESdEWUGY1xmJzr4iR6Ak54YM7c=";
+    hash = "sha256-ZNevSqEpTdk0cZeMzOpbtatEiV9SAsVUlRb9YddcAGY=";
   };
 
+  postPatch = ''
+    # not actually used and we don't have django-template-partials packaged
+    sed -i "/template_partials/d" tests/settings.py
+  '';
+
   build-system = [ hatchling ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/django-graphiql-debug-toolbar/default.nix b/pkgs/development/python-modules/django-graphiql-debug-toolbar/default.nix
index 8569e756d5ee..3355b6e4af84 100644
--- a/pkgs/development/python-modules/django-graphiql-debug-toolbar/default.nix
+++ b/pkgs/development/python-modules/django-graphiql-debug-toolbar/default.nix
@@ -61,6 +61,8 @@ buildPythonPackage rec {
     export DJANGO_SETTINGS_MODULE=tests.settings
   '';
 
+  doCheck = false; # tests broke with django-debug-toolbar 6.0
+
   meta = with lib; {
     changelog = "https://github.com/flavors/django-graphiql-debug-toolbar/releases/tag/${src.rev}";
     description = "Django Debug Toolbar for GraphiQL IDE";
diff --git a/pkgs/development/python-modules/django-guardian/default.nix b/pkgs/development/python-modules/django-guardian/default.nix
index a6727b8f055b..2f03409bcd59 100644
--- a/pkgs/development/python-modules/django-guardian/default.nix
+++ b/pkgs/development/python-modules/django-guardian/default.nix
@@ -1,29 +1,32 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   django-environ,
-  mock,
   django,
   pytestCheckHook,
   pytest-django,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "django-guardian";
-  version = "2.4.0";
-  format = "setuptools";
+  version = "3.0.3";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "c58a68ae76922d33e6bdc0e69af1892097838de56e93e78a8361090bcd9f89a0";
+  src = fetchFromGitHub {
+    owner = "django-guardian";
+    repo = "django-guardian";
+    tag = version;
+    hash = "sha256-0rOEue+OApWQmSBuwTLnu/yU5HUa5pgvVBUG5fT4iwY=";
   };
 
-  propagatedBuildInputs = [ django ];
+  build-system = [ setuptools ];
+
+  dependencies = [ django ];
 
   nativeCheckInputs = [
     django-environ
-    mock
     pytestCheckHook
     pytest-django
   ];
@@ -33,10 +36,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Per object permissions for Django";
     homepage = "https://github.com/django-guardian/django-guardian";
-    license = with licenses; [
-      mit
-      bsd2
-    ];
+    license = with licenses; [ bsd2 ];
     maintainers = [ ];
   };
 }
diff --git a/pkgs/development/python-modules/django-health-check/default.nix b/pkgs/development/python-modules/django-health-check/default.nix
index 17d187a6a6cb..229f31e1892e 100644
--- a/pkgs/development/python-modules/django-health-check/default.nix
+++ b/pkgs/development/python-modules/django-health-check/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "django-health-check";
-  version = "3.18.3";
+  version = "3.20.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "KristianOellegaard";
     repo = "django-health-check";
     tag = version;
-    hash = "sha256-+6+YxB/x4JdKUCwxxe+YIc+r1YAzngFUHiS6atupWM8=";
+    hash = "sha256-qgABCDWKGYZ67sKvCozUQfmYcKWMpEVNLxInTnIaojk=";
   };
 
   build-system = [ setuptools-scm ];
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Pluggable app that runs a full check on the deployment";
     homepage = "https://github.com/KristianOellegaard/django-health-check";
-    changelog = "https://github.com/revsys/django-health-check/releases/tag/${version}";
+    changelog = "https://github.com/revsys/django-health-check/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ onny ];
   };
diff --git a/pkgs/development/python-modules/django-hijack/default.nix b/pkgs/development/python-modules/django-hijack/default.nix
index 55b6bf4244f9..872f77d95671 100644
--- a/pkgs/development/python-modules/django-hijack/default.nix
+++ b/pkgs/development/python-modules/django-hijack/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "django-hijack";
-  version = "3.7.2";
+  version = "3.7.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "django-hijack";
     repo = "django-hijack";
     tag = version;
-    hash = "sha256-JGcVXM/kWsahGNh1llV4NB+/FLAh3hqFRbs3PyYqRnA=";
+    hash = "sha256-0Ix8bTOt+5Bzvbx0OrgxvQU/t9IaZlq7gLtCeVPR2qc=";
   };
 
   build-system = [
@@ -52,7 +52,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Allows superusers to hijack (=login as) and work on behalf of another user";
     homepage = "https://github.com/django-hijack/django-hijack";
-    changelog = "https://github.com/django-hijack/django-hijack/releases/tag/${version}";
+    changelog = "https://github.com/django-hijack/django-hijack/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ ris ];
   };
diff --git a/pkgs/development/python-modules/django-mfa3/default.nix b/pkgs/development/python-modules/django-mfa3/default.nix
index 5651335e8c2f..2f7cfff01122 100644
--- a/pkgs/development/python-modules/django-mfa3/default.nix
+++ b/pkgs/development/python-modules/django-mfa3/default.nix
@@ -5,7 +5,7 @@
   django,
   setuptools,
   pyotp,
-  fido2_2,
+  fido2,
   qrcode,
   python,
 }:
@@ -27,7 +27,7 @@ buildPythonPackage rec {
   dependencies = [
     django
     pyotp
-    fido2_2
+    fido2
     qrcode
   ];
 
diff --git a/pkgs/development/python-modules/django-modeltranslation/default.nix b/pkgs/development/python-modules/django-modeltranslation/default.nix
index 65bcd446d902..91ee56a3382d 100644
--- a/pkgs/development/python-modules/django-modeltranslation/default.nix
+++ b/pkgs/development/python-modules/django-modeltranslation/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "django-modeltranslation";
-  version = "0.19.14";
+  version = "0.19.16";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "deschler";
     repo = "django-modeltranslation";
     tag = "v${version}";
-    hash = "sha256-jvVzSltq4wkSmndyyOGxldXJVpydmCCrHMGTGiMUNA0=";
+    hash = "sha256-8A5fIZuUMlXe8bHQR0Ha5HoT9VIQsgqpJVMONB5KqCI=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/django-multiselectfield/default.nix b/pkgs/development/python-modules/django-multiselectfield/default.nix
index ad365b7062f3..0945ab27d9e5 100644
--- a/pkgs/development/python-modules/django-multiselectfield/default.nix
+++ b/pkgs/development/python-modules/django-multiselectfield/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "django-multiselectfield";
-  version = "0.1.13";
+  version = "1.0.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "django_multiselectfield";
     inherit version;
-    hash = "sha256-Q31yYy9MDKQWlRkXYyUpw9HUK2K7bDwD4zlvpQJlvpQ=";
+    hash = "sha256-P4tP/z4H1Kkci7S4Cbw1yusitBdptgb0ye3FO41ypmc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/django-pattern-library/default.nix b/pkgs/development/python-modules/django-pattern-library/default.nix
index 268187cf852c..da43dd05c8ac 100644
--- a/pkgs/development/python-modules/django-pattern-library/default.nix
+++ b/pkgs/development/python-modules/django-pattern-library/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "django-pattern-library";
-  version = "1.3.0";
+  version = "1.5.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "torchbox";
     repo = "django-pattern-library";
     tag = "v${version}";
-    hash = "sha256-2a/Rg6ljBe1J0FOob7Z9aNVZZ3l+gTD34QCRjk4PiQg=";
+    hash = "sha256-urK34rlBU5GuEOlUtmJLGv6wlTP5H/RMAkwQu5S2Jbo=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "UI pattern libraries for Django templates";
     homepage = "https://github.com/torchbox/django-pattern-library/";
-    changelog = "https://github.com/torchbox/django-pattern-library/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/torchbox/django-pattern-library/blob/${src.tag}/CHANGELOG.md";
     license = licenses.bsd3;
     maintainers = with maintainers; [ sephi ];
   };
diff --git a/pkgs/development/python-modules/django-polymorphic/default.nix b/pkgs/development/python-modules/django-polymorphic/default.nix
index ff2682c6d3e7..bcc8f58aae38 100644
--- a/pkgs/development/python-modules/django-polymorphic/default.nix
+++ b/pkgs/development/python-modules/django-polymorphic/default.nix
@@ -11,21 +11,16 @@
 
 buildPythonPackage rec {
   pname = "django-polymorphic";
-  version = "4.0.0";
+  version = "4.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "django-polymorphic";
     repo = "django-polymorphic";
     tag = "v${version}";
-    hash = "sha256-cEV9gnc9gLpAVmYkzSaQwDbgXsklMTq71edndDJeP9E=";
+    hash = "sha256-QcJUKGhWPUHhVVsEZhhjN411Pz4Wn7OL2fhotPOGVm4=";
   };
 
-  patches = [
-    # https://github.com/jazzband/django-polymorphic/issues/616
-    ./django-5.1-compat.patch
-  ];
-
   build-system = [ setuptools ];
 
   dependencies = [ django ];
diff --git a/pkgs/development/python-modules/django-polymorphic/django-5.1-compat.patch b/pkgs/development/python-modules/django-polymorphic/django-5.1-compat.patch
deleted file mode 100644
index 42976118728a..000000000000
--- a/pkgs/development/python-modules/django-polymorphic/django-5.1-compat.patch
+++ /dev/null
@@ -1,22 +0,0 @@
-From a2c48cedc45db52469b93b6fa7a5d50c6722586f Mon Sep 17 00:00:00 2001
-From: Ben Gosney <bengosney@googlemail.com>
-Date: Sun, 25 Aug 2024 14:49:33 +0100
-Subject: [PATCH] fix(query): handle None
-
----
- polymorphic/query.py | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/polymorphic/query.py b/polymorphic/query.py
-index 8e93281a..2d2df6c3 100644
---- a/polymorphic/query.py
-+++ b/polymorphic/query.py
-@@ -278,7 +278,7 @@ def tree_node_test___lookup(my_model, node):
-             elif hasattr(a, "get_source_expressions"):
-                 for source_expression in a.get_source_expressions():
-                     test___lookup(source_expression)
--            else:
-+            elif a is not None:
-                 assert "___" not in a.name, ___lookup_assert_msg
- 
-         for a in args:
diff --git a/pkgs/development/python-modules/django-q2/default.nix b/pkgs/development/python-modules/django-q2/default.nix
index b520ea436776..53f3d46dfd90 100644
--- a/pkgs/development/python-modules/django-q2/default.nix
+++ b/pkgs/development/python-modules/django-q2/default.nix
@@ -10,10 +10,10 @@
   django-redis,
   fetchFromGitHub,
   hiredis,
-  pkgs,
   poetry-core,
   pytest-django,
   pytestCheckHook,
+  redisTestHook,
   stdenv,
 }:
 
@@ -49,31 +49,14 @@ buildPythonPackage rec {
     blessed
     croniter
     django-redis
-    # pyredis refuses to load with hiredis<3.0.0
-    (hiredis.overrideAttrs (
-      new: old: {
-        version = "3.1.0";
-        src = old.src.override {
-          tag = "v${new.version}";
-          hash = "sha256-ID5OJdARd2N2GYEpcYOpxenpZlhWnWr5fAClAgqEgGg=";
-        };
-      }
-    ))
+    hiredis
     pytest-django
     pytestCheckHook
+    redisTestHook
   ];
 
   pythonImportsCheck = [ "django_q" ];
 
-  preCheck = ''
-    ${pkgs.valkey}/bin/redis-server &
-    REDIS_PID=$!
-  '';
-
-  postCheck = ''
-    kill $REDIS_PID
-  '';
-
   env = {
     MONGO_HOST = "127.0.0.1";
     REDIS_HOST = "127.0.0.1";
diff --git a/pkgs/development/python-modules/django-rq/default.nix b/pkgs/development/python-modules/django-rq/default.nix
index 9d5c228222c1..1cbd4d7c3011 100644
--- a/pkgs/development/python-modules/django-rq/default.nix
+++ b/pkgs/development/python-modules/django-rq/default.nix
@@ -1,34 +1,44 @@
 {
   lib,
   buildPythonPackage,
-  isPy27,
   fetchFromGitHub,
+  hatchling,
   django,
   redis,
   rq,
+  prometheus-client,
   sentry-sdk,
+  psycopg,
+  pytest-django,
+  pytestCheckHook,
+  redisTestHook,
 }:
 
 buildPythonPackage rec {
   pname = "django-rq";
-  version = "3.0.1";
-  format = "setuptools";
-  disabled = isPy27;
+  version = "3.1";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "rq";
     repo = "django-rq";
     tag = "v${version}";
-    hash = "sha256-f4ilMKMWNr/NVKRhylr0fFiKFEKHXU/zIlPnq7fCYNs=";
+    hash = "sha256-TnOKgw52ykKcR0gHXcdYfv77js7I63PE1F3POdwJgvc=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ hatchling ];
+
+  dependencies = [
     django
     redis
     rq
-    sentry-sdk
   ];
 
+  optional-dependencies = {
+    prometheus = [ prometheus-client ];
+    sentry = [ sentry-sdk ];
+  };
+
   pythonImportsCheck = [ "django_rq" ];
 
   doCheck = false; # require redis-server
diff --git a/pkgs/development/python-modules/django-scim2/default.nix b/pkgs/development/python-modules/django-scim2/default.nix
index 7125394c00fe..fa91f8fe1e76 100644
--- a/pkgs/development/python-modules/django-scim2/default.nix
+++ b/pkgs/development/python-modules/django-scim2/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "django-scim2";
-  version = "0.19.0";
+  version = "0.20.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "15five";
     repo = "django-scim2";
     tag = version;
-    hash = "sha256-larDh4f9/xVr11/n/WfkJ2Tx45DMQqyK3ZzkWAvzeig=";
+    hash = "sha256-OsfC6Jc/oQl6nzy3Nr3vkY+XicRxUoV62hK8MHa3LJ8=";
   };
 
   # remove this when upstream releases a new version > 0.19.0
@@ -51,7 +51,7 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
-    changelog = "https://github.com/15five/django-scim2/blob/${src.rev}/CHANGES.txt";
+    changelog = "https://github.com/15five/django-scim2/blob/${src.tag}/CHANGES.txt";
     description = "SCIM 2.0 Service Provider Implementation (for Django)";
     homepage = "https://github.com/15five/django-scim2";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/django-simple-history/default.nix b/pkgs/development/python-modules/django-simple-history/default.nix
index 248d70052120..730217b039da 100644
--- a/pkgs/development/python-modules/django-simple-history/default.nix
+++ b/pkgs/development/python-modules/django-simple-history/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "django-simple-history";
-  version = "3.9.0";
+  version = "3.10.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "jazzband";
     repo = "django-simple-history";
     tag = version;
-    hash = "sha256-df6AWyliKSqKH0yacpHgGZXNvmjiJuFJWoJ7502IMB4=";
+    hash = "sha256-th0ZkHMKWcI6nNhgjpkvmyKaJ/TdWK12mBPUTFab8g4=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/django-stubs-ext/default.nix b/pkgs/development/python-modules/django-stubs-ext/default.nix
index 40464d29fcff..1931b9f6b6c5 100644
--- a/pkgs/development/python-modules/django-stubs-ext/default.nix
+++ b/pkgs/development/python-modules/django-stubs-ext/default.nix
@@ -2,29 +2,34 @@
   lib,
   buildPythonPackage,
   django,
-  fetchPypi,
+  fetchFromGitHub,
+  hatchling,
   oracledb,
+  pytest-mypy-plugins,
+  pytest-xdist,
   pytestCheckHook,
-  pythonOlder,
   redis,
-  setuptools,
   typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "django-stubs-ext";
-  version = "5.2.0";
+  version = "5.2.2";
   pyproject = true;
 
-  disabled = pythonOlder "3.10";
-
-  src = fetchPypi {
-    pname = "django_stubs_ext";
-    inherit version;
-    hash = "sha256-AMSuMHtTj1ZDr3YakUw/jk4/JfTnxtcJjxkGwNjyqsk=";
+  src = fetchFromGitHub {
+    owner = "typeddjango";
+    repo = "django-stubs";
+    tag = version;
+    hash = "sha256-kF5g0/rkMQxYTfSrTqzZ6BuqGlE42K/AVhc1/ARc+/c=";
   };
 
-  build-system = [ setuptools ];
+  postPatch = ''
+    cd ext
+    ln -s ../scripts
+  '';
+
+  build-system = [ hatchling ];
 
   dependencies = [
     django
@@ -36,7 +41,16 @@ buildPythonPackage rec {
     oracle = [ oracledb ];
   };
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [
+    pytest-mypy-plugins
+    pytest-xdist
+    pytestCheckHook
+  ];
+
+  disabledTestPaths = [
+    # error: Skipping analyzing "django.db": module is installed, but missing library stubs or py.typed marker  [import-untyped] (diff)
+    "tests/typecheck"
+  ];
 
   pythonImportsCheck = [ "django_stubs_ext" ];
 
diff --git a/pkgs/development/python-modules/django-stubs/default.nix b/pkgs/development/python-modules/django-stubs/default.nix
index bc7897dd6ba9..e80d281e5200 100644
--- a/pkgs/development/python-modules/django-stubs/default.nix
+++ b/pkgs/development/python-modules/django-stubs/default.nix
@@ -3,11 +3,12 @@
   buildPythonPackage,
   django,
   django-stubs-ext,
-  fetchPypi,
+  fetchFromGitHub,
   mypy,
+  pytest-mypy-plugins,
   pytestCheckHook,
   pythonOlder,
-  setuptools,
+  hatchling,
   tomli,
   types-pytz,
   types-pyyaml,
@@ -16,23 +17,17 @@
 
 buildPythonPackage rec {
   pname = "django-stubs";
-  version = "5.2.0";
+  version = "5.2.2";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
-  src = fetchPypi {
-    pname = "django_stubs";
-    inherit version;
-    hash = "sha256-B+JcLTy/9b5UAif/N3GcyJ8hXfqqpesDinWwG7+7JyI=";
+  src = fetchFromGitHub {
+    owner = "typeddjango";
+    repo = "django-stubs";
+    tag = version;
+    hash = "sha256-kF5g0/rkMQxYTfSrTqzZ6BuqGlE42K/AVhc1/ARc+/c=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace-fail "setuptools<79.0.0" setuptools
-  '';
-
-  build-system = [ setuptools ];
+  build-system = [ hatchling ];
 
   dependencies = [
     django
@@ -48,9 +43,19 @@ buildPythonPackage rec {
   };
 
   nativeCheckInputs = [
+    pytest-mypy-plugins
     pytestCheckHook
   ]
-  ++ lib.flatten (builtins.attrValues optional-dependencies);
+  ++ lib.flatten (lib.attrValues optional-dependencies);
+
+  disabledTests = [
+    # AttributeError: module 'django.contrib.auth.forms' has no attribute 'SetUnusablePasswordMixin'
+    "test_find_classes_inheriting_from_generic"
+  ];
+
+  disabledTestPaths = [
+    "tests/typecheck"
+  ];
 
   pythonImportsCheck = [ "django-stubs" ];
 
diff --git a/pkgs/development/python-modules/django-tasks/default.nix b/pkgs/development/python-modules/django-tasks/default.nix
index b7798dce2319..e8d556f773b4 100644
--- a/pkgs/development/python-modules/django-tasks/default.nix
+++ b/pkgs/development/python-modules/django-tasks/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "django-tasks";
-  version = "0.7.0";
+  version = "0.8.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "RealOrangeOne";
     repo = "django-tasks";
     tag = version;
-    hash = "sha256-AWsqAvn11uklrFXtiV2a6fR3owZ02osEzrdHZgDKkOM=";
+    hash = "sha256-fXXqPmpyIq+66okWDmTIBaoaslY8BSILXjJWn8cXnMM=";
   };
 
   build-system = [
@@ -65,6 +65,8 @@ buildPythonPackage rec {
     "test_dry_run"
     # AssertionError: '' != 'Deleted 1 task result(s)'
     "test_prunes_tasks"
+    # AssertionError: 'Run maximum tasks (2)' not found in ''
+    "test_max_tasks"
   ];
 
   preCheck = ''
@@ -74,7 +76,7 @@ buildPythonPackage rec {
   meta = {
     description = "Reference implementation and backport of background workers and tasks in Django";
     homepage = "https://github.com/RealOrangeOne/django-tasks";
-    changelog = "https://github.com/RealOrangeOne/django-tasks/releases/tag/${version}";
+    changelog = "https://github.com/RealOrangeOne/django-tasks/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/django-webpack-loader/default.nix b/pkgs/development/python-modules/django-webpack-loader/default.nix
index 30bd093ac061..1d9693514dca 100644
--- a/pkgs/development/python-modules/django-webpack-loader/default.nix
+++ b/pkgs/development/python-modules/django-webpack-loader/default.nix
@@ -2,29 +2,27 @@
   lib,
   buildPythonPackage,
   django,
-  fetchPypi,
-  pythonOlder,
+  fetchFromGitHub,
   setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "django-webpack-loader";
-  version = "3.1.1";
+  version = "3.2.1";
   pyproject = true;
 
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-8Rt5cA0b/BKZExvfS6R5wewgD4OhQA4aL+tcK6e2+MQ=";
+  src = fetchFromGitHub {
+    owner = "django-webpack";
+    repo = "django-webpack-loader";
+    tag = version;
+    hash = "sha256-2CmIaVDSZlqfSJVPVBmOcT89znjxQhe7ZHhe7i6DCGY=";
   };
 
   build-system = [ setuptools-scm ];
 
   dependencies = [ django ];
 
-  # django.core.exceptions.ImproperlyConfigured (path issue with DJANGO_SETTINGS_MODULE?)
-  doCheck = false;
+  doCheck = false; # tests require fetching node_modules
 
   pythonImportsCheck = [ "webpack_loader" ];
 
diff --git a/pkgs/development/python-modules/django/3.13.6-html-parser.patch b/pkgs/development/python-modules/django/3.13.6-html-parser.patch
new file mode 100644
index 000000000000..6d986be38478
--- /dev/null
+++ b/pkgs/development/python-modules/django/3.13.6-html-parser.patch
@@ -0,0 +1,58 @@
+From e0a1e8d549e7be25960b8ad060c63def3dc35d1d Mon Sep 17 00:00:00 2001
+From: Natalia <124304+nessita@users.noreply.github.com>
+Date: Mon, 21 Jul 2025 15:23:32 -0300
+Subject: [PATCH 1/2] Fixed test_utils.tests.HTMLEqualTests.test_parsing_errors
+ following Python's HTMLParser fixed parsing.
+
+Further details about Python changes can be found in:
+https://github.com/python/cpython/commit/0243f97cbadec8d985e63b1daec5d1cbc850cae3.
+
+Thank you Clifford Gama for the thorough review!
+---
+ tests/test_utils/tests.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/tests/test_utils/tests.py b/tests/test_utils/tests.py
+index 37e87aa1022c..9c22b61b4ff2 100644
+--- a/tests/test_utils/tests.py
++++ b/tests/test_utils/tests.py
+@@ -962,7 +962,7 @@ def test_parsing_errors(self):
+             "('Unexpected end tag `div` (Line 1, Column 6)', (1, 6))"
+         )
+         with self.assertRaisesMessage(AssertionError, error_msg):
+-            self.assertHTMLEqual("< div></ div>", "<div></div>")
++            self.assertHTMLEqual("< div></div>", "<div></div>")
+         with self.assertRaises(HTMLParseError):
+             parse_html("</p>")
+ 
+
+From e8afcf0e644553bcba3e5f931266963bffc46748 Mon Sep 17 00:00:00 2001
+From: Natalia <124304+nessita@users.noreply.github.com>
+Date: Mon, 14 Jul 2025 14:45:03 -0300
+Subject: [PATCH 2/2] Fixed #36499 -- Adjusted
+ utils_tests.test_html.TestUtilsHtml.test_strip_tags following Python's
+ HTMLParser new behavior.
+
+Python fixed a quadratic complexity processing for HTMLParser in:
+https://github.com/python/cpython/commit/6eb6c5dbfb528bd07d77b60fd71fd05d81d45c41.
+---
+ tests/utils_tests/test_html.py | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/tests/utils_tests/test_html.py b/tests/utils_tests/test_html.py
+index 284f33aedcfb..51573b81eb9d 100644
+--- a/tests/utils_tests/test_html.py
++++ b/tests/utils_tests/test_html.py
+@@ -142,10 +142,10 @@ def test_strip_tags(self):
+             ("&gotcha&#;<>", "&gotcha&#;<>"),
+             ("<sc<!-- -->ript>test<<!-- -->/script>", "ript>test"),
+             ("<script>alert()</script>&h", "alert()h"),
+-            ("><!" + ("&" * 16000) + "D", "><!" + ("&" * 16000) + "D"),
++            ("><!" + ("&" * 16000) + "D", ">"),
+             ("X<<<<br>br>br>br>X", "XX"),
+             ("<" * 50 + "a>" * 50, ""),
+-            (">" + "<a" * 500 + "a", ">" + "<a" * 500 + "a"),
++            (">" + "<a" * 500 + "a", ">"),
+             ("<a" * 49 + "a" * 951, "<a" * 49 + "a" * 951),
+             ("<" + "a" * 1_002, "<" + "a" * 1_002),
+         )
diff --git a/pkgs/development/python-modules/django/4.nix b/pkgs/development/python-modules/django/4.nix
index 2bd5b6ae34ce..04a73e71871a 100644
--- a/pkgs/development/python-modules/django/4.nix
+++ b/pkgs/development/python-modules/django/4.nix
@@ -79,6 +79,12 @@ buildPythonPackage rec {
       includes = [ "django/*" ]; # tests don't apply
       hash = "sha256-8YwdOBNJq6+GNoxzdLyN9HEEIWRXGQk9YbyfPwYVkwU=";
     })
+
+  ]
+  ++ lib.optionals (pythonAtLeast "3.13") [
+    # https://code.djangoproject.com/ticket/36499
+    # https://github.com/django/django/pull/19639
+    ./3.13.6-html-parser.patch
   ]
   ++ lib.optionals withGdal [
     (replaceVars ./django_4_set_geos_gdal_lib.patch {
diff --git a/pkgs/development/python-modules/django/5_1.nix b/pkgs/development/python-modules/django/5_1.nix
index 4b2b815d9d11..bf01cf87c85c 100644
--- a/pkgs/development/python-modules/django/5_1.nix
+++ b/pkgs/development/python-modules/django/5_1.nix
@@ -4,6 +4,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   fetchpatch,
+  pythonAtLeast,
   pythonOlder,
   replaceVars,
 
@@ -71,6 +72,11 @@ buildPythonPackage rec {
       hash = "sha256-+K20/V8sh036Ox9U7CSPgfxue7f28Sdhr3MsB7erVOk=";
     })
   ]
+  ++ lib.optionals (pythonAtLeast "3.13") [
+    # https://code.djangoproject.com/ticket/36499
+    # https://github.com/django/django/pull/19639
+    ./3.13.6-html-parser.patch
+  ]
   ++ lib.optionals withGdal [
     (replaceVars ./django_5_set_geos_gdal_lib.patch {
       geos = geos;
diff --git a/pkgs/development/python-modules/django/5_2.nix b/pkgs/development/python-modules/django/5_2.nix
index 7d28672ec604..c1db9106da63 100644
--- a/pkgs/development/python-modules/django/5_2.nix
+++ b/pkgs/development/python-modules/django/5_2.nix
@@ -3,7 +3,7 @@
   stdenv,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
+  pythonAtLeast,
   pythonOlder,
   replaceVars,
 
@@ -43,7 +43,7 @@
 
 buildPythonPackage rec {
   pname = "django";
-  version = "5.2.4";
+  version = "5.2.5";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -52,7 +52,7 @@ buildPythonPackage rec {
     owner = "django";
     repo = "django";
     rev = "refs/tags/${version}";
-    hash = "sha256-0AtH3vyEeQUKep17j5koiUi/ACgLc9JLMxkwWovCkvE=";
+    hash = "sha256-1Lw0L+mPynf9CmioiTQhePgqCLniUkv9E0ZIoHhhBTs=";
   };
 
   patches = [
@@ -64,6 +64,11 @@ buildPythonPackage rec {
     # disable test that expects timezone issues
     ./django_5_disable_failing_tests.patch
   ]
+  ++ lib.optionals (pythonAtLeast "3.13") [
+    # https://code.djangoproject.com/ticket/36499
+    # https://github.com/django/django/pull/19639
+    ./3.13.6-html-parser.patch
+  ]
   ++ lib.optionals withGdal [
     (replaceVars ./django_5_set_geos_gdal_lib.patch {
       geos = geos;
diff --git a/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
index ed2d7aa31830..07794f2a21d4 100644
--- a/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
+++ b/pkgs/development/python-modules/djangorestframework-simplejwt/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "djangorestframework-simplejwt";
-  version = "5.5.0";
+  version = "5.5.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "djangorestframework_simplejwt";
     inherit version;
-    hash = "sha256-R0obc3Bn5kYrNgliejktE6Taigix8FdBBKxtexQG+Q4=";
+    hash = "sha256-5yxVcvUdeAMCEojiBXr8vQPxf+EdSECW9ApGCrx26H8=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/djangorestframework-stubs/default.nix b/pkgs/development/python-modules/djangorestframework-stubs/default.nix
index b0434f169f43..941f231d288d 100644
--- a/pkgs/development/python-modules/djangorestframework-stubs/default.nix
+++ b/pkgs/development/python-modules/djangorestframework-stubs/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "djangorestframework-stubs";
-  version = "3.16.0";
+  version = "3.16.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "typeddjango";
     repo = "djangorestframework-stubs";
     tag = version;
-    hash = "sha256-q/9tCMT79TMHIQ4KH8tiunaTt7L6IItwNYBFlbNxBcE=";
+    hash = "sha256-TTv6v7G3LODrUDSYSNNa4+dujih7QElmvK3mMQg9EuQ=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/djoser/default.nix b/pkgs/development/python-modules/djoser/default.nix
index cffcd3376600..cad26f0dc57c 100644
--- a/pkgs/development/python-modules/djoser/default.nix
+++ b/pkgs/development/python-modules/djoser/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "djoser";
-  version = "2.3.1";
+  version = "2.3.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "sunscrapers";
     repo = "djoser";
     tag = version;
-    hash = "sha256-xPhf7FiJSq5bHfAU5RKbobgnsRh/6cLcXP6vfrLdzJA=";
+    hash = "sha256-RFOKEjAh5k/Bx7cj6ty2vQsW61lsXfJIJDOZeqL6iCE=";
   };
 
   build-system = [ poetry-core ];
@@ -34,7 +34,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "djoser" ];
 
   meta = {
-    changelog = "https://github.com/sunscrapers/djoser/releases/tag/${version}";
+    changelog = "https://github.com/sunscrapers/djoser/releases/tag/${src.tag}";
     description = "REST implementation of Django authentication system";
     homepage = "https://github.com/sunscrapers/djoser";
     maintainers = with lib.maintainers; [ MostafaKhaled ];
diff --git a/pkgs/development/python-modules/dnachisel/default.nix b/pkgs/development/python-modules/dnachisel/default.nix
index e2e7de4adb18..ad0ec55aec7c 100644
--- a/pkgs/development/python-modules/dnachisel/default.nix
+++ b/pkgs/development/python-modules/dnachisel/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "dnachisel";
-  version = "3.2.13";
+  version = "3.2.16";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "Edinburgh-Genome-Foundry";
     repo = "DnaChisel";
     tag = "v${version}";
-    hash = "sha256-XmaUkmRGD1py5+8gfRe/6WegX1bOQtbTDDUT6RO2rBk=";
+    hash = "sha256-F+G7dwehUCHYKSGsLQR4OZg2NQ4677XMlN6jOcmz8No=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/docling-jobkit/default.nix b/pkgs/development/python-modules/docling-jobkit/default.nix
index c9e6e82b2dec..43bc73a5c1fe 100644
--- a/pkgs/development/python-modules/docling-jobkit/default.nix
+++ b/pkgs/development/python-modules/docling-jobkit/default.nix
@@ -36,14 +36,14 @@
 
 buildPythonPackage rec {
   pname = "docling-jobkit";
-  version = "1.1.1";
+  version = "1.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "docling-project";
     repo = "docling-jobkit";
     tag = "v${version}";
-    hash = "sha256-Q4RCA/gJxyfOfzuRnuCmndVEeV0JUCTU389KSEv7vVk=";
+    hash = "sha256-bLLcMbN6GNpZ8U5Fhyq/XaHawOFcrFrobY7Jtpdm8Qo=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/docling-serve/default.nix b/pkgs/development/python-modules/docling-serve/default.nix
index af20571493ae..0b0230b88d39 100644
--- a/pkgs/development/python-modules/docling-serve/default.nix
+++ b/pkgs/development/python-modules/docling-serve/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "docling-serve";
-  version = "1.0.1";
+  version = "1.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "docling-project";
     repo = "docling-serve";
     tag = "v${version}";
-    hash = "sha256-/jaSmDk8eweXbYO0yyhXiLvp/T4viFsNC4vGoTMhbbU=";
+    hash = "sha256-A8q1mjrtm8VgwsOpBCVD61K88wrjsYHiWdbv0XvACG4=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/docling/default.nix b/pkgs/development/python-modules/docling/default.nix
index cbb5993b93d7..54731e8bcb56 100644
--- a/pkgs/development/python-modules/docling/default.nix
+++ b/pkgs/development/python-modules/docling/default.nix
@@ -52,14 +52,14 @@
 
 buildPythonPackage rec {
   pname = "docling";
-  version = "2.42.0";
+  version = "2.43.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "docling-project";
     repo = "docling";
     tag = "v${version}";
-    hash = "sha256-9HUomW55Yg5N7u3Wb4imzRUYECeGkb3lkHPLEGzuAnA=";
+    hash = "sha256-fMLED97DhfHp74GVDtdPXrJvfpKw6bOvQAaGTWZrPyE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/docplex/default.nix b/pkgs/development/python-modules/docplex/default.nix
index 2095590adb2c..5931a41fbdbc 100644
--- a/pkgs/development/python-modules/docplex/default.nix
+++ b/pkgs/development/python-modules/docplex/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "docplex";
-  version = "2.29.245";
+  version = "2.30.251";
   pyproject = true;
 
   # No source available from official repo
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pCb+P6WQUPX+dzFfe6Hcfao1fH2NDtBmpYNWRx2FPko=";
+    hash = "sha256-ZQMhn1tRJ1p+TnfKQzKQOw+Akl0gUDCkjT9qp8oNvyo=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/docstring-to-markdown/default.nix b/pkgs/development/python-modules/docstring-to-markdown/default.nix
index ae8696f13418..c47f3f3338e0 100644
--- a/pkgs/development/python-modules/docstring-to-markdown/default.nix
+++ b/pkgs/development/python-modules/docstring-to-markdown/default.nix
@@ -2,28 +2,35 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  importlib-metadata,
   pytestCheckHook,
-  pythonOlder,
+  setuptools,
+  typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "docstring-to-markdown";
-  version = "0.15";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "0.17";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python-lsp";
     repo = "docstring-to-markdown";
     tag = "v${version}";
-    hash = "sha256-ykqY7LFIOTuAddYkKDzIltq8FpLVz4v2ZA3Y0cZH9ms=";
+    hash = "sha256-conwwToBrlDL487zf2ldCOxFFKxP1a8LnU0KocI8riI=";
   };
 
   postPatch = ''
     sed -i -E '/--(cov|flake8)/d' setup.cfg
   '';
 
+  build-system = [ setuptools ];
+
+  dependencies = [
+    importlib-metadata
+    typing-extensions
+  ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "docstring_to_markdown" ];
@@ -31,7 +38,7 @@ buildPythonPackage rec {
   meta = with lib; {
     homepage = "https://github.com/python-lsp/docstring-to-markdown";
     description = "On the fly conversion of Python docstrings to markdown";
-    changelog = "https://github.com/python-lsp/docstring-to-markdown/releases/tag/v${version}";
+    changelog = "https://github.com/python-lsp/docstring-to-markdown/releases/tag/${src.tag}";
     license = licenses.lgpl2Plus;
     maintainers = with maintainers; [ doronbehar ];
   };
diff --git a/pkgs/development/python-modules/dom-toml/default.nix b/pkgs/development/python-modules/dom-toml/default.nix
index 0b190913a658..3c54e8023d70 100644
--- a/pkgs/development/python-modules/dom-toml/default.nix
+++ b/pkgs/development/python-modules/dom-toml/default.nix
@@ -9,13 +9,13 @@
 }:
 buildPythonPackage rec {
   pname = "dom-toml";
-  version = "2.0.1";
+  version = "2.1.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit version;
     pname = "dom_toml";
-    hash = "sha256-McWHRZXHd/QcwZHDTGbb6iFcgomnsUi0Jft6EMP0+8g=";
+    hash = "sha256-XMDdEM4lZtNbwdlKbvFsBilx/wMYxvNwWADWHSB1raw=";
   };
 
   build-system = [ flit-core ];
diff --git a/pkgs/development/python-modules/drf-standardized-errors/default.nix b/pkgs/development/python-modules/drf-standardized-errors/default.nix
index 484e5c12325c..457849c8df4a 100644
--- a/pkgs/development/python-modules/drf-standardized-errors/default.nix
+++ b/pkgs/development/python-modules/drf-standardized-errors/default.nix
@@ -15,24 +15,16 @@
 
 buildPythonPackage rec {
   pname = "drf-standardized-errors";
-  version = "0.14.1";
+  version = "0.15.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ghazi-git";
     repo = "drf-standardized-errors";
     tag = "v${version}";
-    hash = "sha256-Gr4nj2dd0kZTc4IbLhb0i3CnY+VZaNnr3YJctyxIgQU=";
+    hash = "sha256-OM1bTqM3yQSPuerTrq5FKTf5eKpZsF6/QgupMtnnT4Q=";
   };
 
-  patches = [
-    # fix test_openapi_utils test
-    (fetchpatch {
-      url = "https://github.com/ghazi-git/drf-standardized-errors/commit/dbc37d4228bdefa858ab299517097d6e52a0b698.patch";
-      hash = "sha256-CZTBmhAFKODGLiN2aQNKMaR8VyKs0H55Tzu4Rh6X9R8=";
-    })
-  ];
-
   build-system = [ flit-core ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/dtlssocket/default.nix b/pkgs/development/python-modules/dtlssocket/default.nix
index a9810c51cb07..699032aee4e1 100644
--- a/pkgs/development/python-modules/dtlssocket/default.nix
+++ b/pkgs/development/python-modules/dtlssocket/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "dtlssocket";
-  version = "0.2.2";
+  version = "0.2.3";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-TnbXFXJuDEbcCeNdqbZxewY8I4mwbBcj3sw7o4tzh/Q=";
+    hash = "sha256-8Gy+Mt+FYtu8y+J0qvJ9J3PoSSqGxBwzSzoKcKUAN88=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/duckduckgo-search/default.nix b/pkgs/development/python-modules/duckduckgo-search/default.nix
index 644f6dc45646..4e82b6382161 100644
--- a/pkgs/development/python-modules/duckduckgo-search/default.nix
+++ b/pkgs/development/python-modules/duckduckgo-search/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "duckduckgo-search";
-  version = "8.1.1";
+  version = "9.5.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "deedy5";
     repo = "ddgs";
     tag = "v${version}";
-    hash = "sha256-ikNGBkDRyhX8yO/7DYMh1w4q3LCN7A7jsuqFsNQGsy4=";
+    hash = "sha256-8OGO70J/o6oUfgdMKgZOtmOf4Nenk3VcV8kxU6UnEFQ=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/dulwich/default.nix b/pkgs/development/python-modules/dulwich/default.nix
index 00f06e0a8c4b..09dd99fbb1e3 100644
--- a/pkgs/development/python-modules/dulwich/default.nix
+++ b/pkgs/development/python-modules/dulwich/default.nix
@@ -1,7 +1,7 @@
 {
   lib,
-  stdenv,
   buildPythonPackage,
+  cargo,
   fastimport,
   fetchFromGitHub,
   gevent,
@@ -10,17 +10,22 @@
   glibcLocales,
   gnupg,
   gpgme,
+  merge3,
   paramiko,
   pytestCheckHook,
   pythonOlder,
+  rich,
+  rustPlatform,
+  rustc,
   setuptools,
   setuptools-rust,
+  typing-extensions,
   urllib3,
 }:
 
 buildPythonPackage rec {
   pname = "dulwich";
-  version = "0.22.8";
+  version = "0.24.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -29,21 +34,37 @@ buildPythonPackage rec {
     owner = "jelmer";
     repo = "dulwich";
     tag = "dulwich-${version}";
-    hash = "sha256-T0Tmu5sblTkqiak9U4ltkGbWw8ZE91pTlhPVMRi5Pxk=";
+    hash = "sha256-GGVvTKDLWPcx1f28Esl9sDXj33157NhSssYD/C+fLy4=";
   };
 
+  cargoDeps = rustPlatform.fetchCargoVendor {
+    inherit pname version src;
+    hash = "sha256-qGAvy0grueKI+A0nsXntf/EWtozSc138iFDhlfiktK8=";
+  };
+
+  nativeBuildInputs = [
+    rustPlatform.cargoSetupHook
+    cargo
+    rustc
+  ];
+
   build-system = [
     setuptools
     setuptools-rust
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     urllib3
+  ]
+  ++ lib.optionals (pythonOlder "3.11") [
+    typing-extensions
   ];
 
   optional-dependencies = {
+    colordiff = [ rich ];
     fastimport = [ fastimport ];
     https = [ urllib3 ];
+    merge = [ merge3 ];
     pgp = [
       gpgme
       gnupg
@@ -65,6 +86,14 @@ buildPythonPackage rec {
   disabledTests = [
     # AssertionError: 'C:\\\\foo.bar\\\\baz' != 'C:\\foo.bar\\baz'
     "test_file_win"
+    # dulwich.errors.NotGitRepository: No git repository was found at .
+    "WorktreeCliTests"
+    # 'SwiftPackData' object has no attribute '_file'
+    "test_iterobjects_subset_all_present"
+    "test_iterobjects_subset_missing_allowed"
+    "test_iterobjects_subset_missing_not_allowed"
+    # Adding a symlink to a directory outside the repo doesn't raise
+    "test_add_symlink_absolute_to_system"
   ];
 
   disabledTestPaths = [
diff --git a/pkgs/development/python-modules/dunamai/default.nix b/pkgs/development/python-modules/dunamai/default.nix
index 105302ca0d3a..9de31f0a3dd5 100644
--- a/pkgs/development/python-modules/dunamai/default.nix
+++ b/pkgs/development/python-modules/dunamai/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "dunamai";
-  version = "1.23.0";
+  version = "1.25.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mtkennerly";
     repo = "dunamai";
     tag = "v${version}";
-    hash = "sha256-JuW/VL8kfzz5mSXRHtrg/hHykgcewaQYfDuO2PALbWc=";
+    hash = "sha256-kPOEhJwsSzGea7fS5y5tbAvzZZ+OxIyjpYpS6i++rHE=";
   };
 
   build-system = [ poetry-core ];
@@ -55,7 +55,7 @@ buildPythonPackage rec {
     description = "Dynamic version generation";
     mainProgram = "dunamai";
     homepage = "https://github.com/mtkennerly/dunamai";
-    changelog = "https://github.com/mtkennerly/dunamai/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/mtkennerly/dunamai/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ jmgilman ];
   };
diff --git a/pkgs/development/python-modules/dvc-data/default.nix b/pkgs/development/python-modules/dvc-data/default.nix
index da6dafe5f08b..fc17f023f46d 100644
--- a/pkgs/development/python-modules/dvc-data/default.nix
+++ b/pkgs/development/python-modules/dvc-data/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "dvc-data";
-  version = "3.16.10";
+  version = "3.16.11";
   pyproject = true;
 
   disabled = pythonOlder "3.12";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "iterative";
     repo = "dvc-data";
     tag = version;
-    hash = "sha256-kYPgEsLrcSYf6YAjFENf2HZKdQ4391pFxaZDIFOubkY=";
+    hash = "sha256-BuGJzIZzHr/Q7N+bO3WUb92I6fs3tWxb/xdf22vFbj8=";
   };
 
   build-system = [ setuptools-scm ];
@@ -51,7 +51,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "DVC's data management subsystem";
     homepage = "https://github.com/iterative/dvc-data";
-    changelog = "https://github.com/iterative/dvc-data/releases/tag/${version}";
+    changelog = "https://github.com/iterative/dvc-data/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
     mainProgram = "dvc-data";
diff --git a/pkgs/development/python-modules/dvclive/default.nix b/pkgs/development/python-modules/dvclive/default.nix
index 0e0a75c5c4e1..31d2539af170 100644
--- a/pkgs/development/python-modules/dvclive/default.nix
+++ b/pkgs/development/python-modules/dvclive/default.nix
@@ -33,7 +33,7 @@
 
 buildPythonPackage rec {
   pname = "dvclive";
-  version = "3.48.3";
+  version = "3.48.4";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -42,7 +42,7 @@ buildPythonPackage rec {
     owner = "iterative";
     repo = "dvclive";
     tag = version;
-    hash = "sha256-peT7L4SpCtjOVr4qaLyFtqEIiqAnEaTMfYxu02L9q2s=";
+    hash = "sha256-fs0NbsjpGaR4cXE/ajfeF6ZJ3fc7K28KDJ0LIJ/vsdg=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/e3-core/default.nix b/pkgs/development/python-modules/e3-core/default.nix
index a391fe073081..3c5f7e79ee60 100644
--- a/pkgs/development/python-modules/e3-core/default.nix
+++ b/pkgs/development/python-modules/e3-core/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "e3-core";
-  version = "22.6.0";
+  version = "22.10.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "AdaCore";
     repo = "e3-core";
     tag = "v${version}";
-    hash = "sha256-6rClGDo8KhBbOg/Rw0nVISVtOAACf5cwSafNInlBGCw=";
+    hash = "sha256-LHWtgIvbS1PaF85aOpdhR0rWQGRUtbY0Qg1SZxQOsSc=";
   };
 
   build-system = [ setuptools ];
@@ -61,7 +61,7 @@ buildPythonPackage rec {
   doCheck = false;
 
   meta = with lib; {
-    changelog = "https://github.com/AdaCore/e3-core/releases/tag/v${version}";
+    changelog = "https://github.com/AdaCore/e3-core/releases/tag/${src.tag}";
     homepage = "https://github.com/AdaCore/e3-core/";
     description = "Core framework for developing portable automated build systems";
     license = licenses.gpl3Only;
diff --git a/pkgs/development/python-modules/ebooklib/default.nix b/pkgs/development/python-modules/ebooklib/default.nix
index 67e00275f3b9..a253169235be 100644
--- a/pkgs/development/python-modules/ebooklib/default.nix
+++ b/pkgs/development/python-modules/ebooklib/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "ebooklib";
-  version = "0.18";
+  version = "0.19";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "aerkalov";
     repo = "ebooklib";
-    rev = "v${version}";
-    hash = "sha256-Ciks/eeRpkqkWnyLgyHC+x/dSOcj/ZT45KUElKqv1F8=";
+    tag = "v${version}";
+    hash = "sha256-al5iSw3sIIjIYRZPrYgbBQ7V324f6OTxmtrnoOHafSQ=";
   };
 
   propagatedBuildInputs = [
@@ -28,7 +28,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python E-book library for handling books in EPUB2/EPUB3  format";
     homepage = "https://github.com/aerkalov/ebooklib";
-    changelog = "https://github.com/aerkalov/ebooklib/blob/${src.rev}/CHANGES.txt";
+    changelog = "https://github.com/aerkalov/ebooklib/blob/${src.tag}/CHANGES.txt";
     license = licenses.agpl3Only;
     maintainers = with maintainers; [ Scrumplex ];
   };
diff --git a/pkgs/development/python-modules/echo/default.nix b/pkgs/development/python-modules/echo/default.nix
index 71bdcd1b40a4..ca2d32af37a7 100644
--- a/pkgs/development/python-modules/echo/default.nix
+++ b/pkgs/development/python-modules/echo/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "echo";
-  version = "0.10.0";
+  version = "0.11.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "glue-viz";
     repo = "echo";
     tag = "v${version}";
-    sha256 = "sha256-RlTscoStJQ0vjrrk14xHRsMZOJt8eJSqinc4rY/lW4k=";
+    sha256 = "sha256-Uikzn9vbLctiZ6W0uA6hNvr7IB/FhCcHk+JxBW7yrA4=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/elasticsearch8/default.nix b/pkgs/development/python-modules/elasticsearch8/default.nix
index 2e4deb6c103a..de8d5ebb3730 100644
--- a/pkgs/development/python-modules/elasticsearch8/default.nix
+++ b/pkgs/development/python-modules/elasticsearch8/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "elasticsearch8";
-  version = "8.17.2";
+  version = "8.19.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-j6FaQWPFJ8kqoTwjIPyMDcOZBg8mOO0BbKCFn4ESCAM=";
+    hash = "sha256-7D4M4iw+d2Ok21twUxX/PKDxtC6++bPicYI18jrHlY0=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/elementpath/default.nix b/pkgs/development/python-modules/elementpath/default.nix
index 6f0a61cfcb7e..de31d75927d9 100644
--- a/pkgs/development/python-modules/elementpath/default.nix
+++ b/pkgs/development/python-modules/elementpath/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "elementpath";
-  version = "4.8.0";
+  version = "5.0.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "sissaschool";
     repo = "elementpath";
     tag = "v${version}";
-    hash = "sha256-MHE3uzO1HTd1CGWwTeztDjNIe2EvS8AOYJhCZ2Wjjzo=";
+    hash = "sha256-gjJsgc3JrFHgdhDDzLHQspoj99jHmIbkCULEq20yAss=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/elevenlabs/default.nix b/pkgs/development/python-modules/elevenlabs/default.nix
index a1f3fe145dfb..0a0fb3b88b5e 100644
--- a/pkgs/development/python-modules/elevenlabs/default.nix
+++ b/pkgs/development/python-modules/elevenlabs/default.nix
@@ -13,7 +13,7 @@
 }:
 
 let
-  version = "2.7.1";
+  version = "2.8.2";
   tag = "v${version}";
 in
 buildPythonPackage {
@@ -25,7 +25,7 @@ buildPythonPackage {
     owner = "elevenlabs";
     repo = "elevenlabs-python";
     inherit tag;
-    hash = "sha256-QbjVd+cVe6Y/deTeO31bwjGHNl9ykOrWFdFhOepFnxY=";
+    hash = "sha256-QHWY8I4saucDLDX29EmyPFKCS5MxAC5Le2GEFZk4GBw=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/epicstore-api/default.nix b/pkgs/development/python-modules/epicstore-api/default.nix
index 5c7cb927b3f3..4bc4e125c364 100644
--- a/pkgs/development/python-modules/epicstore-api/default.nix
+++ b/pkgs/development/python-modules/epicstore-api/default.nix
@@ -3,25 +3,25 @@
   fetchFromGitHub,
   lib,
   pytestCheckHook,
-  requests,
+  cloudscraper,
   setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "epicstore-api";
-  version = "0.1.9";
+  version = "0.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "SD4RK";
     repo = "epicstore_api";
     tag = "v_${version}";
-    hash = "sha256-9Gh9bsNgZx/SinKr7t1dvqrOUP+z4Gs8BFMLYtboFmg=";
+    hash = "sha256-XSynUz8rAl/+jcPMCZoVKlGZLVcTCAr36VEWVhAydoM=";
   };
 
   build-system = [ setuptools ];
 
-  dependencies = [ requests ];
+  dependencies = [ cloudscraper ];
 
   pythonImportsCheck = [ "epicstore_api" ];
 
@@ -31,7 +31,7 @@ buildPythonPackage rec {
   doCheck = false;
 
   meta = {
-    changelog = "https://github.com/SD4RK/epicstore_api/releases/tag/v_${version}";
+    changelog = "https://github.com/SD4RK/epicstore_api/releases/tag/v_${src.tag}";
     description = "Epic Games Store Web API Wrapper written in Python";
     homepage = "https://github.com/SD4RK/epicstore_api";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/eradicate/default.nix b/pkgs/development/python-modules/eradicate/default.nix
index 987cfbd7d0ce..621f0bdb5dd8 100644
--- a/pkgs/development/python-modules/eradicate/default.nix
+++ b/pkgs/development/python-modules/eradicate/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "eradicate";
-  version = "2.3.0";
+  version = "3.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "wemake-services";
     repo = "eradicate";
     tag = version;
-    hash = "sha256-ikiqNe1a+OeRraNBbtAx6v3LsTajWlgxm4wR2Tcbmjk=";
+    hash = "sha256-V3g9qYM/TiOz83IMoUwu0CvFWBxB5Yk3Dy3G/Dz3vYw=";
   };
 
   nativeCheckInputs = [ pytestCheckHook ];
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     description = "Library to remove commented-out code from Python files";
     mainProgram = "eradicate";
     homepage = "https://github.com/myint/eradicate";
-    changelog = "https://github.com/wemake-services/eradicate/releases/tag/${version}";
+    changelog = "https://github.com/wemake-services/eradicate/releases/tag/${src.tag}";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ mmlb ];
   };
diff --git a/pkgs/development/python-modules/es-client/default.nix b/pkgs/development/python-modules/es-client/default.nix
index da67670cc4ea..5f8397da9b3e 100644
--- a/pkgs/development/python-modules/es-client/default.nix
+++ b/pkgs/development/python-modules/es-client/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "es-client";
-  version = "8.17.4";
+  version = "8.18.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "untergeek";
     repo = "es_client";
     tag = "v${version}";
-    hash = "sha256-43LB0QceljuS3k+yYtJCbJsstsFr3d2h2Gnjal2HcdQ=";
+    hash = "sha256-siB17xVRS/eeKOsJcWdh4foOHXbeV8wwRclXDHodADM=";
   };
 
   pythonRelaxDeps = true;
diff --git a/pkgs/development/python-modules/esprima/default.nix b/pkgs/development/python-modules/esprima/default.nix
index fde0d9260063..957b7bbb6f3c 100644
--- a/pkgs/development/python-modules/esprima/default.nix
+++ b/pkgs/development/python-modules/esprima/default.nix
@@ -3,7 +3,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   pythonOlder,
-  pytestCheckHook,
+  pytest8_3CheckHook,
 }:
 
 buildPythonPackage rec {
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     sha256 = "WtkPCReXhxyr6pOzE9gsdIeBlLk+nSnbxkS3OowEaHo=";
   };
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest8_3CheckHook ];
 
   enabledTestPaths = [ "test/__main__.py::TestEsprima" ];
 
diff --git a/pkgs/development/python-modules/essentials/default.nix b/pkgs/development/python-modules/essentials/default.nix
index f0174bb0a081..9854a018afae 100644
--- a/pkgs/development/python-modules/essentials/default.nix
+++ b/pkgs/development/python-modules/essentials/default.nix
@@ -8,14 +8,14 @@
 }:
 buildPythonPackage rec {
   pname = "essentials";
-  version = "1.1.5";
+  version = "1.1.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Neoteroi";
     repo = "essentials";
-    rev = "v${version}";
-    hash = "sha256-WMHjBVkeSoQ4Naj1U7Bg9j2hcoErH1dx00BPKiom9T4=";
+    tag = "v${version}";
+    hash = "sha256-wOZ0y6sAPEy2MgcwmM9SjnULe6oWlVuNeC7Zl070CK4=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -33,7 +33,7 @@ buildPythonPackage rec {
   meta = with lib; {
     homepage = "https://github.com/Neoteroi/essentials";
     description = "General purpose classes and functions";
-    changelog = "https://github.com/Neoteroi/essentials/releases/v${version}";
+    changelog = "https://github.com/Neoteroi/essentials/releases/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [
       aldoborrero
diff --git a/pkgs/development/python-modules/eternalegypt/default.nix b/pkgs/development/python-modules/eternalegypt/default.nix
index e1e103482e62..14ee157d9e30 100644
--- a/pkgs/development/python-modules/eternalegypt/default.nix
+++ b/pkgs/development/python-modules/eternalegypt/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "eternalegypt";
-  version = "0.0.16";
+  version = "0.0.17";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "amelchio";
     repo = "eternalegypt";
     tag = "v${version}";
-    hash = "sha256-ubKepd3yBaoYrIUe5WCt1zd4CjvU7SeftOR+2cBaEf0=";
+    hash = "sha256-Qb8s8jU5yn7BIXVIV5cjwE0OnZOWEK8dzTmQDJM22rE=";
   };
 
   propagatedBuildInputs = [
@@ -34,7 +34,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python API for Netgear LTE modems";
     homepage = "https://github.com/amelchio/eternalegypt";
-    changelog = "https://github.com/amelchio/eternalegypt/releases/tag/v${version}";
+    changelog = "https://github.com/amelchio/eternalegypt/releases/tag/${src.tag}";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/etuples/default.nix b/pkgs/development/python-modules/etuples/default.nix
index 855e42fa6e86..cbdcba528193 100644
--- a/pkgs/development/python-modules/etuples/default.nix
+++ b/pkgs/development/python-modules/etuples/default.nix
@@ -7,24 +7,28 @@
   py,
   pytestCheckHook,
   pytest-html,
-  pythonOlder,
+  setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "etuples";
-  version = "0.3.9";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.8";
+  version = "0.3.10";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pythological";
     repo = "etuples";
     tag = "v${version}";
-    hash = "sha256-dl+exar98PnqEiCNX+Ydllp7aohsAYrFtxb2Q1Lxx6Y=";
+    hash = "sha256-h5MLj1z3qZiUXcNIDtUIbV5zeyTzxerbSezFD5Q27n0=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  dependencies = [
     cons
     multipledispatch
   ];
@@ -45,7 +49,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python S-expression emulation using tuple-like objects";
     homepage = "https://github.com/pythological/etuples";
-    changelog = "https://github.com/pythological/etuples/releases/tag/v${version}";
+    changelog = "https://github.com/pythological/etuples/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ Etjean ];
   };
diff --git a/pkgs/development/python-modules/executing/default.nix b/pkgs/development/python-modules/executing/default.nix
index cee6db453e43..edf61a807868 100644
--- a/pkgs/development/python-modules/executing/default.nix
+++ b/pkgs/development/python-modules/executing/default.nix
@@ -2,6 +2,7 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  fetchpatch,
   pythonAtLeast,
   pythonOlder,
 
@@ -30,6 +31,14 @@ buildPythonPackage rec {
     hash = "sha256-2BT4VTZBAJx8Gk4qTTyhSoBMjJvKzmL4PO8IfTpN+2g=";
   };
 
+  patches = [
+    (fetchpatch {
+      name = "pytest-8.4.1-compat.patch";
+      url = "https://github.com/alexmojaki/executing/commit/fae0dd2f4bd0e74b8a928e19407fd4167f4b2295.patch";
+      hash = "sha256-ccYBeP4yXf3U4sRyeGUYhLz7QHbXFiMviQ1n+AIVMdo=";
+    })
+  ];
+
   build-system = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/exifread/default.nix b/pkgs/development/python-modules/exifread/default.nix
index a517d5adf55a..d1d3198525fa 100644
--- a/pkgs/development/python-modules/exifread/default.nix
+++ b/pkgs/development/python-modules/exifread/default.nix
@@ -2,19 +2,21 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "exifread";
-  version = "3.0.0";
-  format = "setuptools";
+  version = "3.4.0";
+  pyproject = true;
 
   src = fetchPypi {
-    pname = "ExifRead";
-    inherit version;
-    hash = "sha256-CsWjZBadvfK9YvlPXAc5cKtmlKMWYXf15EixDJQ+LKQ=";
+    inherit pname version;
+    hash = "sha256-3H+Np3OWcJykFKDu4cJikC9xOvycBDuqi4IzfXYwb/w=";
   };
 
+  build-system = [ setuptools ];
+
   meta = with lib; {
     description = "Easy to use Python module to extract Exif metadata from tiff and jpeg files";
     mainProgram = "EXIF.py";
diff --git a/pkgs/development/python-modules/expandvars/default.nix b/pkgs/development/python-modules/expandvars/default.nix
index 3a2c00137820..627093b5d5b1 100644
--- a/pkgs/development/python-modules/expandvars/default.nix
+++ b/pkgs/development/python-modules/expandvars/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "expandvars";
-  version = "1.0.0";
+  version = "1.1.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-8EBwuCYCZBhfgRQs2F5d+c7vcinoNsWEQwLEzPoAww0=";
+    hash = "sha256-mK3YJot2Df7kV73hwXv3RXlf3rwit92rdf0yeGU/HgU=";
   };
 
   nativeBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/extension-helpers/default.nix b/pkgs/development/python-modules/extension-helpers/default.nix
index 1202333dd8a4..6908f66127ef 100644
--- a/pkgs/development/python-modules/extension-helpers/default.nix
+++ b/pkgs/development/python-modules/extension-helpers/default.nix
@@ -2,17 +2,19 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  pip,
+  build,
+  cython,
   pytestCheckHook,
   pythonOlder,
   setuptools-scm,
   setuptools,
   tomli,
+  wheel,
 }:
 
 buildPythonPackage rec {
   pname = "extension-helpers";
-  version = "1.2.0";
+  version = "1.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +23,7 @@ buildPythonPackage rec {
     owner = "astropy";
     repo = "extension-helpers";
     tag = "v${version}";
-    hash = "sha256-qneulhSYB2gYiCdgoU7Dqg1luLWhVouFVihcKeOA37E=";
+    hash = "sha256-coSgaPoz93CqJRb65xYs1sNOwoGhcxWGJF7Jc9N2W1I=";
   };
 
   build-system = [
@@ -32,8 +34,10 @@ buildPythonPackage rec {
   dependencies = [ setuptools ] ++ lib.optionals (pythonOlder "3.11") [ tomli ];
 
   nativeCheckInputs = [
+    build
+    cython
     pytestCheckHook
-    pip
+    wheel
   ];
 
   pythonImportsCheck = [ "extension_helpers" ];
@@ -43,12 +47,14 @@ buildPythonPackage rec {
   disabledTests = [
     # Test require network access
     "test_only_pyproject"
+    # ModuleNotFoundError
+    "test_no_setup_py"
   ];
 
   meta = with lib; {
     description = "Helpers to assist with building Python packages with compiled C/Cython extensions";
     homepage = "https://github.com/astropy/extension-helpers";
-    changelog = "https://github.com/astropy/extension-helpers/blob/${version}/CHANGES.md";
+    changelog = "https://github.com/astropy/extension-helpers/blob/${src.tag}/CHANGES.md";
     license = licenses.bsd3;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/eyed3/default.nix b/pkgs/development/python-modules/eyed3/default.nix
index be683a9cc0c9..10dc8a3bf455 100644
--- a/pkgs/development/python-modules/eyed3/default.nix
+++ b/pkgs/development/python-modules/eyed3/default.nix
@@ -1,37 +1,42 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   isPyPy,
-  six,
+  setuptools,
   filetype,
   deprecation,
 }:
 
 buildPythonPackage rec {
-  version = "0.9.7";
-  format = "setuptools";
-  pname = "eyeD3";
+  version = "0.9.8";
+  pname = "eyed3";
+  pyproject = true;
+
   disabled = isPyPy;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-k7GOk5M3akURT5QJ18yhGftvT5o31LaXtQCvSLTFzw8=";
+  src = fetchFromGitHub {
+    owner = "nicfit";
+    repo = "eyeD3";
+    tag = "v${version}";
+    hash = "sha256-erjTgHjtrUMBj09/s3sZzct6Tg979a16a4fVGnwT0qk=";
   };
 
+  build-system = [ setuptools ];
+
+  dependencies = [
+    deprecation
+    filetype
+  ];
+
   # requires special test data:
   # https://github.com/nicfit/eyeD3/blob/103198e265e3279384f35304e8218be6717c2976/Makefile#L97
   doCheck = false;
 
-  propagatedBuildInputs = [
-    deprecation
-    filetype
-    six
-  ];
-
   meta = with lib; {
     description = "Python module and command line program for processing ID3 tags";
     mainProgram = "eyeD3";
+    downloadPage = "https://github.com/nicfit/eyeD3";
     homepage = "https://eyed3.nicfit.net/";
     license = licenses.gpl2;
     maintainers = with maintainers; [ lovek323 ];
diff --git a/pkgs/development/python-modules/fabric/default.nix b/pkgs/development/python-modules/fabric/default.nix
index cc77add86616..ada40a9ba905 100644
--- a/pkgs/development/python-modules/fabric/default.nix
+++ b/pkgs/development/python-modules/fabric/default.nix
@@ -61,6 +61,11 @@ buildPythonPackage rec {
     # https://github.com/fabric/fabric/issues/2341
     "client_defaults_to_a_new_SSHClient"
     "defaults_to_auto_add"
+
+    # Fixture "fake_agent" called directly. Fixtures are not meant to be called directly
+    "no_stdin"
+    "fake_agent"
+    "fake"
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/facedancer/default.nix b/pkgs/development/python-modules/facedancer/default.nix
index e341d09aff69..a3720a6d4cec 100644
--- a/pkgs/development/python-modules/facedancer/default.nix
+++ b/pkgs/development/python-modules/facedancer/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "facedancer";
-  version = "3.1.0";
+  version = "3.1.1";
   pyproject = true;
   disabled = pythonOlder "3.10";
 
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "greatscottgadgets";
     repo = "facedancer";
     tag = version;
-    hash = "sha256-u1fvrfjk79R16MUuYx8m63EkgHJiMmAksaduk4lVnTw=";
+    hash = "sha256-Qe8DPUKwlukPftc7SOZIcY/do/14UdS61WH0g5dFeMI=";
   };
 
   postPatch = ''
@@ -45,7 +45,7 @@ buildPythonPackage rec {
   ];
 
   meta = {
-    changelog = "https://github.com/greatscottgadgets/facedancer/releases/tag/${version}";
+    changelog = "https://github.com/greatscottgadgets/facedancer/releases/tag/${src.tag}";
     description = "Implement your own USB device in Python, supported by a hardware peripheral such as Cynthion or GreatFET";
     homepage = "https://github.com/greatscottgadgets/facedancer";
     license = lib.licenses.bsd3;
diff --git a/pkgs/development/python-modules/faker/default.nix b/pkgs/development/python-modules/faker/default.nix
index 6ae251e20af2..6107ff2350e4 100644
--- a/pkgs/development/python-modules/faker/default.nix
+++ b/pkgs/development/python-modules/faker/default.nix
@@ -15,12 +15,12 @@
 
 buildPythonPackage rec {
   pname = "faker";
-  version = "37.3.0";
+  version = "37.5.3";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-d7eeeiIo1XF1Ezrwu83SbcYj34HbOQ7lL1EE1GwBDy8=";
+    hash = "sha256-gxXY/01vT1iL1C/+Y6vVmYhseFBz4mpEcH4Q7rpXE9w=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/fakeredis/default.nix b/pkgs/development/python-modules/fakeredis/default.nix
index 78151cd6f485..0a475eccd8ec 100644
--- a/pkgs/development/python-modules/fakeredis/default.nix
+++ b/pkgs/development/python-modules/fakeredis/default.nix
@@ -5,9 +5,9 @@
   hypothesis,
   jsonpath-ng,
   lupa,
-  poetry-core,
+  hatchling,
   pyprobables,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-mock,
   pytestCheckHook,
   pythonOlder,
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "fakeredis";
-  version = "2.29.0";
+  version = "2.30.3";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -27,10 +27,10 @@ buildPythonPackage rec {
     owner = "dsoftwareinc";
     repo = "fakeredis-py";
     tag = "v${version}";
-    hash = "sha256-wBUsoPmTIE3VFvmMnW4B9Unw/V63dIvsBTYCloElamA=";
+    hash = "sha256-SQVLuO5cA+XO7hEBph7XGlnomTcysB3ye9jZ8sy9GAI=";
   };
 
-  build-system = [ poetry-core ];
+  build-system = [ hatchling ];
 
   dependencies = [
     redis
@@ -47,7 +47,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     hypothesis
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-mock
     pytestCheckHook
     redisTestHook
@@ -57,6 +57,11 @@ buildPythonPackage rec {
 
   disabledTestMarks = [ "slow" ];
 
+  disabledTests = [
+    "test_init_args" # AttributeError: module 'fakeredis' has no attribute 'FakeValkey'
+    "test_async_init_kwargs" # AttributeError: module 'fakeredis' has no attribute 'FakeAsyncValkey'"
+  ];
+
   preCheck = ''
     redisTestPort=6390
   '';
@@ -64,7 +69,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Fake implementation of Redis API";
     homepage = "https://github.com/dsoftwareinc/fakeredis-py";
-    changelog = "https://github.com/cunla/fakeredis-py/releases/tag/v${version}";
+    changelog = "https://github.com/cunla/fakeredis-py/releases/tag/${src.tag}";
     license = with licenses; [ bsd3 ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/fastapi-cli/default.nix b/pkgs/development/python-modules/fastapi-cli/default.nix
index 89384a31070b..b40e8800e684 100644
--- a/pkgs/development/python-modules/fastapi-cli/default.nix
+++ b/pkgs/development/python-modules/fastapi-cli/default.nix
@@ -15,14 +15,14 @@
 let
   self = buildPythonPackage rec {
     pname = "fastapi-cli";
-    version = "0.0.7";
+    version = "0.0.8";
     pyproject = true;
 
     src = fetchFromGitHub {
       owner = "tiangolo";
       repo = "fastapi-cli";
       tag = version;
-      hash = "sha256-LLk9DMYRqSgiisDfJVP961Blp2u8XLeGDVuDY7IBv/k=";
+      hash = "sha256-7SYsIgRSFZgtIHBC5Ic9Nlh+LtGJDz0Xx1yxMarAuYY=";
     };
 
     build-system = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/fastapi/default.nix b/pkgs/development/python-modules/fastapi/default.nix
index a18094d8defa..77246fb7eb78 100644
--- a/pkgs/development/python-modules/fastapi/default.nix
+++ b/pkgs/development/python-modules/fastapi/default.nix
@@ -41,7 +41,7 @@
 
 buildPythonPackage rec {
   pname = "fastapi";
-  version = "0.115.12";
+  version = "0.116.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -50,7 +50,7 @@ buildPythonPackage rec {
     owner = "tiangolo";
     repo = "fastapi";
     tag = version;
-    hash = "sha256-qUJFBOwXIizgIrTYbueflimni+/BhbuTEf45dsjShKE=";
+    hash = "sha256-sd0SnaxuuF3Zaxx7rffn4ttBpRmWQoOtXln/amx9rII=";
   };
 
   build-system = [ pdm-backend ];
@@ -136,7 +136,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "fastapi" ];
 
   meta = with lib; {
-    changelog = "https://github.com/fastapi/fastapi/releases/tag/${version}";
+    changelog = "https://github.com/fastapi/fastapi/releases/tag/${src.tag}";
     description = "Web framework for building APIs";
     homepage = "https://github.com/fastapi/fastapi";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/fastavro/default.nix b/pkgs/development/python-modules/fastavro/default.nix
index 9fbbaccbc289..04c419eaedcd 100644
--- a/pkgs/development/python-modules/fastavro/default.nix
+++ b/pkgs/development/python-modules/fastavro/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "fastavro";
-  version = "1.11.1";
+  version = "1.12.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "fastavro";
     repo = "fastavro";
     tag = version;
-    hash = "sha256-I8Te1Ae20UrE5qI2nwktU0Ubip7Jx4/NWteSKsSz7tg=";
+    hash = "sha256-r/dNXBmsNnvYbvXdZC5++1B9884dQV76pLga6u3XtO8=";
   };
 
   preBuild = ''
@@ -72,7 +72,7 @@ buildPythonPackage rec {
     description = "Fast read/write of AVRO files";
     mainProgram = "fastavro";
     homepage = "https://github.com/fastavro/fastavro";
-    changelog = "https://github.com/fastavro/fastavro/blob/${version}/ChangeLog";
+    changelog = "https://github.com/fastavro/fastavro/blob/${src.tag}/ChangeLog";
     license = licenses.mit;
     maintainers = with maintainers; [ samuela ];
   };
diff --git a/pkgs/development/python-modules/fastbencode/default.nix b/pkgs/development/python-modules/fastbencode/default.nix
index ab515a234fa1..bb93f32fc693 100644
--- a/pkgs/development/python-modules/fastbencode/default.nix
+++ b/pkgs/development/python-modules/fastbencode/default.nix
@@ -1,33 +1,49 @@
 {
   lib,
   buildPythonPackage,
-  cython,
-  fetchPypi,
-  python,
-  pythonOlder,
+  fetchFromGitHub,
+  cargo,
+  rustc,
+  rustPlatform,
   setuptools,
+  setuptools-rust,
+  python,
 }:
 
 buildPythonPackage rec {
   pname = "fastbencode";
-  version = "0.3.2";
+  version = "0.3.5";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-o0wyxQSw7J3hpJk0btJJMjWetGI0sotwl1pQ/fqhSrU=";
+  src = fetchFromGitHub {
+    owner = "breezy-team";
+    repo = "fastbencode";
+    tag = "v${version}";
+    hash = "sha256-E02MASmHsXWIqVQuFVwXK0MRocrA7LSga7o42au1gGE=";
   };
 
-  build-system = [ setuptools ];
+  cargoDeps = rustPlatform.fetchCargoVendor {
+    inherit pname version src;
+    hash = "sha256-r229xfSrkbDEfm/nGFuQshyP4o04US0xJiRK4oXtaYE=";
+  };
 
-  nativeBuildInputs = [ cython ];
+  nativeBuildInputs = [
+    cargo
+    rustPlatform.cargoSetupHook
+    rustc
+  ];
+
+  build-system = [
+    setuptools
+    setuptools-rust
+  ];
 
   pythonImportsCheck = [ "fastbencode" ];
 
   checkPhase = ''
-    ${python.interpreter} -m unittest fastbencode.tests.test_suite
+    runHook preCheck
+    ${python.interpreter} -m unittest tests.test_suite
+    runHook postCheck
   '';
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/fastjet/default.nix b/pkgs/development/python-modules/fastjet/default.nix
index f1708d02cf81..08b3098d4825 100644
--- a/pkgs/development/python-modules/fastjet/default.nix
+++ b/pkgs/development/python-modules/fastjet/default.nix
@@ -31,13 +31,13 @@ in
 
 buildPythonPackage rec {
   pname = "fastjet";
-  version = "3.4.3.1";
+  version = "3.5.1.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "fastjet";
     inherit version;
-    hash = "sha256-c9LE3axkm3tJt6RfHHIbJZsA/0s2Cl1UqxGKqKvospI=";
+    hash = "sha256-2GG9A+/2rgYpsJo1tu3BprOM7bKwYVV6/qIIMtYSr9o=";
   };
 
   # unvendor fastjet/fastjet-contrib
diff --git a/pkgs/development/python-modules/fastmcp/default.nix b/pkgs/development/python-modules/fastmcp/default.nix
index c87ef6e3e938..418fdfef0075 100644
--- a/pkgs/development/python-modules/fastmcp/default.nix
+++ b/pkgs/development/python-modules/fastmcp/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "fastmcp";
-  version = "2.10.6";
+  version = "2.11.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jlowin";
     repo = "fastmcp";
     tag = "v${version}";
-    hash = "sha256-Wxugk2ocuur710WZLG7xph2R/n02Y9BvH7Lf4BuEMYs=";
+    hash = "sha256-Y71AJdWcRBDbq63p+lcQplqutz2UTQ3f+pTyhcolpuw=";
   };
 
   postPatch = ''
@@ -115,7 +115,7 @@ buildPythonPackage rec {
 
   meta = {
     description = "Fast, Pythonic way to build MCP servers and clients";
-    changelog = "https://github.com/jlowin/fastmcp/releases/tag/v${version}";
+    changelog = "https://github.com/jlowin/fastmcp/releases/tag/${src.tag}";
     homepage = "https://github.com/jlowin/fastmcp";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ GaetanLepage ];
diff --git a/pkgs/development/python-modules/feedgenerator/default.nix b/pkgs/development/python-modules/feedgenerator/default.nix
index 725150b18fb6..0f79decf5377 100644
--- a/pkgs/development/python-modules/feedgenerator/default.nix
+++ b/pkgs/development/python-modules/feedgenerator/default.nix
@@ -2,39 +2,28 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  glibcLocales,
+  hatchling,
+  pytest-cov-stub,
   pytestCheckHook,
-  pythonOlder,
-  pytz,
-  six,
 }:
 
 buildPythonPackage rec {
   pname = "feedgenerator";
-  version = "2.1.0";
-  format = "setuptools";
-  disabled = pythonOlder "3.6";
+  version = "2.2.0";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-8HXyPyj9In8JfDayEhYcbPAS4cbKr3/1PV1rsCzUK50=";
+    hash = "sha256-KXb2zMWYmpZyAto0PqFFwhrtq74ANccIjWS6CqlyWmA=";
   };
 
-  postPatch = ''
-    sed -i '/cov/d' setup.cfg
-  '';
+  build-system = [ hatchling ];
 
-  buildInputs = [ glibcLocales ];
-
-  LC_ALL = "en_US.UTF-8";
-
-  propagatedBuildInputs = [
-    pytz
-    six
+  nativeCheckInputs = [
+    pytest-cov-stub
+    pytestCheckHook
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
-
   pythonImportsCheck = [ "feedgenerator" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/fido2/2.nix b/pkgs/development/python-modules/fido2/2.nix
deleted file mode 100644
index a9f8a826e43e..000000000000
--- a/pkgs/development/python-modules/fido2/2.nix
+++ /dev/null
@@ -1,50 +0,0 @@
-{
-  lib,
-  buildPythonPackage,
-  cryptography,
-  fetchPypi,
-  poetry-core,
-  pyscard,
-  pythonOlder,
-  pytestCheckHook,
-}:
-
-buildPythonPackage rec {
-  pname = "fido2";
-  version = "2.0.0";
-  pyproject = true;
-
-  disabled = pythonOlder "3.8";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-MGHNBec7Og72r8O4A9V8gmqi1qlzLRar1ydzYfWOeWQ=";
-  };
-
-  build-system = [ poetry-core ];
-
-  pythonRelaxDeps = [ "cryptography" ];
-
-  dependencies = [ cryptography ];
-
-  optional-dependencies = {
-    pcsc = [ pyscard ];
-  };
-
-  nativeCheckInputs = [ pytestCheckHook ];
-
-  unittestFlagsArray = [ "-v" ];
-
-  # Disable tests which require physical device
-  pytestFlagsArray = [ "--no-device" ];
-
-  pythonImportsCheck = [ "fido2" ];
-
-  meta = {
-    description = "Provides library functionality for FIDO 2.0, including communication with a device over USB";
-    homepage = "https://github.com/Yubico/python-fido2";
-    changelog = "https://github.com/Yubico/python-fido2/releases/tag/${version}";
-    license = lib.licenses.bsd2;
-    maintainers = with lib.maintainers; [ prusnak ];
-  };
-}
diff --git a/pkgs/development/python-modules/fido2/default.nix b/pkgs/development/python-modules/fido2/default.nix
index 9b08a708cfb1..48bafe381f7d 100644
--- a/pkgs/development/python-modules/fido2/default.nix
+++ b/pkgs/development/python-modules/fido2/default.nix
@@ -5,20 +5,17 @@
   fetchPypi,
   poetry-core,
   pyscard,
-  pythonOlder,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "fido2";
-  version = "1.2.0";
+  version = "2.0.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-45+VkgEi1kKD/aXlWB2VogbnBPpChGv6RmL4aqDTMzs=";
+    hash = "sha256-MGHNBec7Og72r8O4A9V8gmqi1qlzLRar1ydzYfWOeWQ=";
   };
 
   build-system = [ poetry-core ];
@@ -33,7 +30,10 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
-  unittestFlagsArray = [ "-v" ];
+  pytestFlags = [
+    "-v"
+    "--no-device"
+  ];
 
   pythonImportsCheck = [ "fido2" ];
 
diff --git a/pkgs/development/python-modules/file-read-backwards/default.nix b/pkgs/development/python-modules/file-read-backwards/default.nix
index ddb141b8ac7c..37669b8f32b7 100644
--- a/pkgs/development/python-modules/file-read-backwards/default.nix
+++ b/pkgs/development/python-modules/file-read-backwards/default.nix
@@ -2,15 +2,15 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  mock,
   pythonOlder,
   setuptools,
-  unittestCheckHook,
+  pytest-mock,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "file-read-backwards";
-  version = "3.1.0";
+  version = "3.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,14 +18,14 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "file_read_backwards";
     inherit version;
-    hash = "sha256-vQRZO8GTigAyJL5FHV1zXx9EkOHnClaM6NMwu3ZSpoQ=";
+    hash = "sha256-VHjTBeuuquj+PGWFok38MmIXAiRFCsyTITmPDSbN0Qk=";
   };
 
   build-system = [ setuptools ];
 
   nativeCheckInputs = [
-    mock
-    unittestCheckHook
+    pytest-mock
+    pytestCheckHook
   ];
 
   pythonImportsCheck = [ "file_read_backwards" ];
diff --git a/pkgs/development/python-modules/findpython/default.nix b/pkgs/development/python-modules/findpython/default.nix
index b755709b553a..4116f0ec2c88 100644
--- a/pkgs/development/python-modules/findpython/default.nix
+++ b/pkgs/development/python-modules/findpython/default.nix
@@ -9,6 +9,7 @@
 
   # runtime
   packaging,
+  platformdirs,
 
   # tests
   pytestCheckHook,
@@ -16,22 +17,23 @@
 
 let
   pname = "findpython";
-  version = "0.6.3";
+  version = "0.7.0";
 in
 buildPythonPackage {
   inherit pname version;
-  format = "pyproject";
-
-  disabled = pythonOlder "3.7";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-WGPqVVVtiq3Gk0gaFKxPNiSVJxnvwcVZGrsLSp6WXJQ=";
+    hash = "sha256-izFkfHY1J3mjwaCAZpm2jmp73AtcLd2a8qB6DUDGc9w=";
   };
 
-  nativeBuildInputs = [ pdm-backend ];
+  build-system = [ pdm-backend ];
 
-  propagatedBuildInputs = [ packaging ];
+  dependencies = [
+    packaging
+    platformdirs
+  ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/fiona/default.nix b/pkgs/development/python-modules/fiona/default.nix
index 5c3b15d96bef..6a7c8b51bee3 100644
--- a/pkgs/development/python-modules/fiona/default.nix
+++ b/pkgs/development/python-modules/fiona/default.nix
@@ -39,6 +39,11 @@ buildPythonPackage rec {
     hash = "sha256-5NN6PBh+6HS9OCc9eC2TcBvkcwtI4DV8qXnz4tlaMXc=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "cython~=3.0.2" cython
+  '';
+
   build-system = [
     cython
     gdal # for gdal-config
diff --git a/pkgs/development/python-modules/firebase-admin/default.nix b/pkgs/development/python-modules/firebase-admin/default.nix
index 2b4f9f979d73..65e61d7321e0 100644
--- a/pkgs/development/python-modules/firebase-admin/default.nix
+++ b/pkgs/development/python-modules/firebase-admin/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "firebase-admin";
-  version = "6.9.0";
+  version = "7.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "firebase";
     repo = "firebase-admin-python";
     tag = "v${version}";
-    hash = "sha256-TB5YIprtSXHbeWlu9U4fDjWCZdO5vM695u28Hv6w2e0=";
+    hash = "sha256-xlKrtH8f9UzY9OGYrpNH0i2OAlcxTrpzPC5JEuL8plM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/firecrawl-py/default.nix b/pkgs/development/python-modules/firecrawl-py/default.nix
index 73985ce40596..10d957fecdea 100644
--- a/pkgs/development/python-modules/firecrawl-py/default.nix
+++ b/pkgs/development/python-modules/firecrawl-py/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "firecrawl-py";
-  version = "1.7.0";
+  version = "1.15.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mendableai";
     repo = "firecrawl";
     tag = "v${version}";
-    hash = "sha256-Tsw5OMjv/t9lt3seG31958R9o+s/6N7MGzHgqgkHrzQ=";
+    hash = "sha256-GIde8FiU1/gS3oFfTf7f7Tc4KvDVL873VE5kjyh33Is=";
   };
 
   sourceRoot = "${src.name}/apps/python-sdk";
diff --git a/pkgs/development/python-modules/firedrake/default.nix b/pkgs/development/python-modules/firedrake/default.nix
index b223e632552c..63977170c065 100644
--- a/pkgs/development/python-modules/firedrake/default.nix
+++ b/pkgs/development/python-modules/firedrake/default.nix
@@ -57,14 +57,14 @@ let
 in
 buildPythonPackage rec {
   pname = "firedrake";
-  version = "2025.4.2";
+  version = "20250331.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "firedrakeproject";
     repo = "firedrake";
-    tag = version;
-    hash = "sha256-bAGmXoHPAdMYJMMQYVq98LYro1Vd+o9pfvXC3BsQUf0=";
+    tag = "Firedrake_${version}";
+    hash = "sha256-J0oAZWkzcrgbry5OTG8hKrIgHcwJtzaDw8staOLM9u4=";
   };
 
   postPatch =
diff --git a/pkgs/development/python-modules/fixtures/default.nix b/pkgs/development/python-modules/fixtures/default.nix
index 8989e474942f..1396001b00fd 100644
--- a/pkgs/development/python-modules/fixtures/default.nix
+++ b/pkgs/development/python-modules/fixtures/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "fixtures";
-  version = "4.2.4.post1";
+  version = "4.2.6";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-A0xL0d6qYKW/y2CM5T2Z6Dkr9HyRplNgWuvdagUkjy4=";
+    hash = "sha256-lUcrFbFFBjpnL74zsSRMz/gp++yX1TDYYtJvQW0WyQs=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/flake8-import-order/default.nix b/pkgs/development/python-modules/flake8-import-order/default.nix
index ea860b563edb..9dd465ada993 100644
--- a/pkgs/development/python-modules/flake8-import-order/default.nix
+++ b/pkgs/development/python-modules/flake8-import-order/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "flake8-import-order";
-  version = "0.18.2";
+  version = "0.19.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-4jlB+JLaPgwJ1xG6u7DHO8c1JC6bIWtyZhZ1ipINkA4=";
+    hash = "sha256-Ezs8VUl2MeQjUHT8mKlQeLuoF4MjefIqMfCtJFW8sLI=";
   };
 
   propagatedBuildInputs = [ pycodestyle ];
diff --git a/pkgs/development/python-modules/flametree/default.nix b/pkgs/development/python-modules/flametree/default.nix
index 0dfd2447b7aa..8070c91bc66e 100644
--- a/pkgs/development/python-modules/flametree/default.nix
+++ b/pkgs/development/python-modules/flametree/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "flametree";
-  version = "0.2.0";
+  version = "0.2.1";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "Edinburgh-Genome-Foundry";
     repo = "Flametree";
     tag = "v${version}";
-    hash = "sha256-4yU4u5OmVP3adz9DNsU0BtuQ7LZYqbOLxbuS48lksHM=";
+    hash = "sha256-5vtDfGmSX5niMXLnMqmafhq6D1gxhxVS3xbOAvQs3Po=";
   };
 
   nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/flashinfer/default.nix b/pkgs/development/python-modules/flashinfer/default.nix
index 430d5254c3e6..5c4c653ed981 100644
--- a/pkgs/development/python-modules/flashinfer/default.nix
+++ b/pkgs/development/python-modules/flashinfer/default.nix
@@ -19,13 +19,13 @@
 
 let
   pname = "flashinfer";
-  version = "0.2.5";
+  version = "0.2.9";
 
   src_cutlass = fetchFromGitHub {
     owner = "NVIDIA";
     repo = "cutlass";
     # Using the revision obtained in submodule inside flashinfer's `3rdparty`.
-    rev = "df8a550d3917b0e97f416b2ed8c2d786f7f686a3";
+    tag = "v${version}";
     hash = "sha256-d4czDoEv0Focf1bJHOVGX4BDS/h5O7RPoM/RrujhgFQ=";
   };
 
@@ -38,7 +38,7 @@ buildPythonPackage {
     owner = "flashinfer-ai";
     repo = "flashinfer";
     tag = "v${version}";
-    hash = "sha256-YrYfatkI9DQkFEEGiF8CK/bTafaNga4Ufyt+882C0bQ=";
+    hash = "sha256-M0q6d+EpuTehbw68AQ73Fhwmw2tzjymYjSXaol9QC7Y=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/flask-appbuilder/default.nix b/pkgs/development/python-modules/flask-appbuilder/default.nix
index a4d08de5452b..8203e26e075a 100644
--- a/pkgs/development/python-modules/flask-appbuilder/default.nix
+++ b/pkgs/development/python-modules/flask-appbuilder/default.nix
@@ -27,7 +27,7 @@
 
 buildPythonPackage rec {
   pname = "flask-appbuilder";
-  version = "4.6.1";
+  version = "4.8.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -35,7 +35,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Flask-AppBuilder";
     inherit version;
-    hash = "sha256-Z1PZbSjiPb97ShMhkk6oyD9/AW/oAhDFZYkTErEZBmA=";
+    hash = "sha256-MrkDcUCNgHzHnTM3DJenPXOP7HLTTthD/YBtupNprhM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/flask-cors/default.nix b/pkgs/development/python-modules/flask-cors/default.nix
index e34dfee61402..6565d6ed6503 100644
--- a/pkgs/development/python-modules/flask-cors/default.nix
+++ b/pkgs/development/python-modules/flask-cors/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "flask-cors";
-  version = "6.0.0";
+  version = "6.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "corydolphin";
     repo = "flask-cors";
     tag = version;
-    hash = "sha256-J9OTWVS0GXxfSedfHeifaJ0LR8xFKksf0RGsKSc581E=";
+    hash = "sha256-ySn5o9yDlCYqHozGJ82cPtty/N+EK/NvIynxv9w+hwc=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/flask-restful/default.nix b/pkgs/development/python-modules/flask-restful/default.nix
index 5b25b9fc610e..cb3bdf117414 100644
--- a/pkgs/development/python-modules/flask-restful/default.nix
+++ b/pkgs/development/python-modules/flask-restful/default.nix
@@ -7,7 +7,7 @@
   flask,
   fetchpatch2,
   mock,
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonOlder,
   pytz,
   six,
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     blinker
     mock
-    pytestCheckHook
+    pytest8_3CheckHook
   ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/flask-swagger-ui/default.nix b/pkgs/development/python-modules/flask-swagger-ui/default.nix
index b8fbada07ee9..5b67e456d090 100644
--- a/pkgs/development/python-modules/flask-swagger-ui/default.nix
+++ b/pkgs/development/python-modules/flask-swagger-ui/default.nix
@@ -7,12 +7,13 @@
 
 buildPythonPackage rec {
   pname = "flask-swagger-ui";
-  version = "4.11.1";
+  version = "5.21.0";
   format = "setuptools";
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-o3AZmngNZ4sy448b4Q1Nge+g7mPp/i+3Zv8aS2w32sg=";
+    pname = "flask_swagger_ui";
+    inherit version;
+    hash = "sha256-hy0DjcEaaOrKuI9vBb48UzqjAEU+Jzd12tPgKbMeA9Q=";
   };
 
   doCheck = false; # there are no tests
diff --git a/pkgs/development/python-modules/flowjax/default.nix b/pkgs/development/python-modules/flowjax/default.nix
index 48cc10ee2233..16f7473b783c 100644
--- a/pkgs/development/python-modules/flowjax/default.nix
+++ b/pkgs/development/python-modules/flowjax/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "flowjax";
-  version = "17.1.2";
+  version = "17.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "danielward27";
     repo = "flowjax";
     tag = "v${version}";
-    hash = "sha256-NTP5QFJDe4tSAuHsQB4ZWyCcqLgW6uUaABfOG/TFgu0=";
+    hash = "sha256-gaHlXm1M41njtgQt+f77Wd7q+PQ+1ipZiLtv59z1ma4=";
   };
 
   build-system = [
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = {
     description = "Distributions, bijections and normalizing flows using Equinox and JAX";
     homepage = "https://github.com/danielward27/flowjax";
-    changelog = "https://github.com/danielward27/flowjax/releases/tag/v${version}";
+    changelog = "https://github.com/danielward27/flowjax/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/fnllm/default.nix b/pkgs/development/python-modules/fnllm/default.nix
index 5e1afe742821..d3368493a984 100644
--- a/pkgs/development/python-modules/fnllm/default.nix
+++ b/pkgs/development/python-modules/fnllm/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "fnllm";
-  version = "0.2.8";
+  version = "0.3.1";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-FafxygW5aZ3U24mesFZI5cmLd1L1FE8rHOrOgL3R+9g=";
+    hash = "sha256-q7aeFXuXIrwjjXEHVpACohWommIxJZo9PRUgh4uLtfA=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/fnv-hash-fast/default.nix b/pkgs/development/python-modules/fnv-hash-fast/default.nix
index ec767a4a1620..98ad5d699e0a 100644
--- a/pkgs/development/python-modules/fnv-hash-fast/default.nix
+++ b/pkgs/development/python-modules/fnv-hash-fast/default.nix
@@ -31,6 +31,8 @@ buildPythonPackage rec {
 
   dependencies = [ fnvhash ];
 
+  pythonRelaxDeps = [ "fnvhash" ];
+
   pythonImportsCheck = [ "fnv_hash_fast" ];
 
   nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/fnvhash/default.nix b/pkgs/development/python-modules/fnvhash/default.nix
index 76ec4ed770b4..1ee089150e1c 100644
--- a/pkgs/development/python-modules/fnvhash/default.nix
+++ b/pkgs/development/python-modules/fnvhash/default.nix
@@ -3,25 +3,33 @@
   buildPythonPackage,
   fetchFromGitHub,
   pytestCheckHook,
+  setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "fnvhash";
-  version = "0.1.0";
-  format = "setuptools";
+  version = "0.2.1";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "znerol";
     repo = "py-fnvhash";
-    rev = "v${version}";
-    sha256 = "00h8i70qd3dpsyf2dp7fkcb9m2prd6m3l33qv3wf6idpnqgjz6fq";
+    tag = "v${version}";
+    hash = "sha256-vAflKSvi0PD5r1q6GCTt6a4vTCsdBIebecRCKbbBphE=";
   };
 
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "fnvhash" ];
 
   meta = with lib; {
+    changelog = "https://github.com/znerol/py-fnvhash/releases/tag/${src.tag}";
     description = "Python FNV hash implementation";
     homepage = "https://github.com/znerol/py-fnvhash";
     license = with licenses; [ mit ];
diff --git a/pkgs/development/python-modules/folium/default.nix b/pkgs/development/python-modules/folium/default.nix
index cc77d9180111..a63d9626fb87 100644
--- a/pkgs/development/python-modules/folium/default.nix
+++ b/pkgs/development/python-modules/folium/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "folium";
-  version = "0.19.5";
+  version = "0.20.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "python-visualization";
     repo = "folium";
     tag = "v${version}";
-    hash = "sha256-jZrGJWSmQXQNlZYldeNSh5AhlTHow5gxCEkksEoKZ7E=";
+    hash = "sha256-yLF4TdrMVEtWvGXZGbwa3OxCkdXMsN4m45rPrGDHlCU=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/fontbakery/default.nix b/pkgs/development/python-modules/fontbakery/default.nix
index e2d2ab0c9218..38210d8004ae 100644
--- a/pkgs/development/python-modules/fontbakery/default.nix
+++ b/pkgs/development/python-modules/fontbakery/default.nix
@@ -47,12 +47,12 @@
 
 buildPythonPackage rec {
   pname = "fontbakery";
-  version = "0.13.2";
+  version = "1.0.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-/wyrBoSUVjdKIIlK3HoDeHQ3yhMPT/0G05llWzDoE50=";
+    hash = "sha256-OPOUNKy70sm/kqrxRi61MjfQp74AdqZh6Gt93LdlmU0=";
   };
 
   env.PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION = "python";
diff --git a/pkgs/development/python-modules/fontfeatures/default.nix b/pkgs/development/python-modules/fontfeatures/default.nix
index 11943c36e05b..5648e37ed9f1 100644
--- a/pkgs/development/python-modules/fontfeatures/default.nix
+++ b/pkgs/development/python-modules/fontfeatures/default.nix
@@ -9,17 +9,20 @@
   lxml,
   pytestCheckHook,
   youseedee,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "fontfeatures";
-  version = "1.8.0";
-  format = "setuptools";
+  version = "1.9.0";
+
+  pyproject = true;
+  build-system = [ setuptools-scm ];
 
   src = fetchPypi {
-    pname = "fontFeatures";
+    pname = "fontfeatures";
     inherit version;
-    hash = "sha256-XLJD91IyUUjeSqdhWFfIqv9yISPcbU4bgRvXETSHOiY=";
+    hash = "sha256-3PpUgaTXyFcthJrFaQqeUOvDYYFosJeXuRFnFrwp0R8=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/fontmake/default.nix b/pkgs/development/python-modules/fontmake/default.nix
index 770b40718ba1..8fb3c30f6df4 100644
--- a/pkgs/development/python-modules/fontmake/default.nix
+++ b/pkgs/development/python-modules/fontmake/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "fontmake";
-  version = "3.10.0";
+  version = "3.10.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googlefonts";
     repo = "fontmake";
     tag = "v${version}";
-    hash = "sha256-ZlK8QyZ5cIEphFiZXMV/Z5pL9H62X2UwLBtpwLGpUMQ=";
+    hash = "sha256-cHFxb7lWUj/7ATynoMGQkhArKWCHHLYvQG5IoaXwVBs=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/fonttools/default.nix b/pkgs/development/python-modules/fonttools/default.nix
index 42c64e016bf9..3c08366084f9 100644
--- a/pkgs/development/python-modules/fonttools/default.nix
+++ b/pkgs/development/python-modules/fonttools/default.nix
@@ -7,7 +7,6 @@
   fetchFromGitHub,
   setuptools,
   setuptools-scm,
-  fs,
   lxml,
   brotli,
   brotlicffi,
@@ -27,7 +26,7 @@
 
 buildPythonPackage rec {
   pname = "fonttools";
-  version = "4.56.0";
+  version = "4.59.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -36,15 +35,9 @@ buildPythonPackage rec {
     owner = "fonttools";
     repo = "fonttools";
     tag = version;
-    hash = "sha256-ZkC1+I2d9wY9J7IoCGHGWG2gOVN7wW274UpN1lQxmJY=";
+    hash = "sha256-f3iedVwwh98XkFzPJ/+XZ2n4pcDXDoPlQki+neGVuXE=";
   };
 
-  patches = [
-    # https://github.com/fonttools/fonttools/pull/3855
-    # FIXME: remove when merged
-    ./python-3.13.4.patch
-  ];
-
   build-system = [
     setuptools
     setuptools-scm
@@ -53,7 +46,7 @@ buildPythonPackage rec {
   optional-dependencies =
     let
       extras = {
-        ufo = [ fs ];
+        ufo = [ ];
         lxml = [ lxml ];
         woff = [
           (if isPyPy then brotlicffi else brotli)
@@ -108,19 +101,6 @@ buildPythonPackage rec {
     "test_ttcompile_timestamp_calcs"
   ];
 
-  disabledTestPaths = [
-    # avoid test which depend on fs and matplotlib
-    # fs and matplotlib were removed to prevent strong cyclic dependencies
-    "Tests/misc/plistlib_test.py"
-    "Tests/pens"
-    "Tests/ufoLib"
-
-    # test suite fails with pytest>=8.0.1
-    # https://github.com/fonttools/fonttools/issues/3458
-    "Tests/ttLib/woff2_test.py"
-    "Tests/ttx/ttx_test.py"
-  ];
-
   meta = with lib; {
     homepage = "https://github.com/fonttools/fonttools";
     description = "Library to manipulate font files from Python";
diff --git a/pkgs/development/python-modules/fonttools/python-3.13.4.patch b/pkgs/development/python-modules/fonttools/python-3.13.4.patch
deleted file mode 100644
index c05def255b17..000000000000
--- a/pkgs/development/python-modules/fonttools/python-3.13.4.patch
+++ /dev/null
@@ -1,25 +0,0 @@
-diff --git a/Lib/fontTools/feaLib/ast.py b/Lib/fontTools/feaLib/ast.py
-index efcce8c680..18e5a891d3 100644
---- a/Lib/fontTools/feaLib/ast.py
-+++ b/Lib/fontTools/feaLib/ast.py
-@@ -719,7 +719,8 @@ def __init__(self, prefix, glyphs, suffix, lookups, location=None):
-         for i, lookup in enumerate(lookups):
-             if lookup:
-                 try:
--                    (_ for _ in lookup)
-+                    for _ in lookup:
-+                        break
-                 except TypeError:
-                     self.lookups[i] = [lookup]
- 
-@@ -777,7 +778,8 @@ def __init__(self, prefix, glyphs, suffix, lookups, location=None):
-         for i, lookup in enumerate(lookups):
-             if lookup:
-                 try:
--                    (_ for _ in lookup)
-+                    for _ in lookup:
-+                        break
-                 except TypeError:
-                     self.lookups[i] = [lookup]
- 
-
diff --git a/pkgs/development/python-modules/foxdot/default.nix b/pkgs/development/python-modules/foxdot/default.nix
index c9bdda75abb6..1fdce0278694 100644
--- a/pkgs/development/python-modules/foxdot/default.nix
+++ b/pkgs/development/python-modules/foxdot/default.nix
@@ -3,22 +3,24 @@
   stdenv,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
   tkinter,
   supercollider,
 }:
 
 buildPythonPackage rec {
   pname = "foxdot";
-  version = "0.8.12";
-  format = "setuptools";
+  version = "0.9.0";
+  pyproject = true;
 
   src = fetchPypi {
-    pname = "FoxDot";
-    inherit version;
-    sha256 = "528999da55ad630e540a39c0eaeacd19c58c36f49d65d24ea9704d0781e18c90";
+    inherit pname version;
+    hash = "sha256-9dIaqrGcYpZeWlRlymRvG9YnTRav0zktfmUpFBlN/7E=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     tkinter
   ]
   # we currently build SuperCollider only on Linux
diff --git a/pkgs/development/python-modules/fpdf2/default.nix b/pkgs/development/python-modules/fpdf2/default.nix
index 55a223cc859a..41e518d00490 100644
--- a/pkgs/development/python-modules/fpdf2/default.nix
+++ b/pkgs/development/python-modules/fpdf2/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "fpdf2";
-  version = "2.8.2";
+  version = "2.8.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "py-pdf";
     repo = "fpdf2";
     tag = version;
-    hash = "sha256-NfHMmyFT+ZpqfRc41DetbFXs/twr12XagOkk3nGhrYk=";
+    hash = "sha256-uLaVRseakLg7Q9QO4F6BM7vQIFeA44ry8cqDfas8oMA=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -63,7 +63,7 @@ buildPythonPackage rec {
   meta = {
     homepage = "https://github.com/py-pdf/fpdf2";
     description = "Simple PDF generation for Python";
-    changelog = "https://github.com/py-pdf/fpdf2/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/py-pdf/fpdf2/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.lgpl3Only;
     maintainers = with lib.maintainers; [ jfvillablanca ];
   };
diff --git a/pkgs/development/python-modules/freezegun/default.nix b/pkgs/development/python-modules/freezegun/default.nix
index 046b3f20046f..991a4d67c5b1 100644
--- a/pkgs/development/python-modules/freezegun/default.nix
+++ b/pkgs/development/python-modules/freezegun/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "freezegun";
-  version = "1.5.1";
+  version = "1.5.4";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-sp3t/NptXo4IPOcbK1QnU61Iz+xEA3s/x5cC4pgKiek=";
+    hash = "sha256-eYuTcv3U2QfzPotqWLxk5oLZ/6jUlM5g94AZfugfrtE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/freud/default.nix b/pkgs/development/python-modules/freud/default.nix
index 360b15d8439c..b7f7646f18bd 100644
--- a/pkgs/development/python-modules/freud/default.nix
+++ b/pkgs/development/python-modules/freud/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "freud";
-  version = "3.1.0";
+  version = "3.3.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "glotzerlab";
     repo = "freud";
     tag = "v${version}";
-    hash = "sha256-jlscEHQ1q4oqxE06NhVWCOlPRcjDcJVrvy4h6iYrkz0=";
+    hash = "sha256-3THoGPjfaDy2s96+Oaf1f2SDzxTaqRDQlNa3gZ/ytUU=";
     fetchSubmodules = true;
   };
 
@@ -93,7 +93,7 @@ buildPythonPackage rec {
   meta = {
     description = "Powerful, efficient particle trajectory analysis in scientific Python";
     homepage = "https://github.com/glotzerlab/freud";
-    changelog = "https://github.com/glotzerlab/freud/blob/${src.rev}/ChangeLog.md";
+    changelog = "https://github.com/glotzerlab/freud/blob/${src.tag}/ChangeLog.md";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ doronbehar ];
   };
diff --git a/pkgs/development/python-modules/frozenlist/default.nix b/pkgs/development/python-modules/frozenlist/default.nix
index 967df73bac5d..3a18ffc017d6 100644
--- a/pkgs/development/python-modules/frozenlist/default.nix
+++ b/pkgs/development/python-modules/frozenlist/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "frozenlist";
-  version = "1.6.0";
+  version = "1.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "aio-libs";
     repo = "frozenlist";
     tag = "v${version}";
-    hash = "sha256-x2o4eiSDxA7nvrifzvV38kjIGmOY8gaQrPNDhCupovg=";
+    hash = "sha256-aBHX/U1L2mcah80edJFY/iXsM05DVas7lJT8yVTjER8=";
   };
 
   postPatch = ''
@@ -48,7 +48,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python module for list-like structure";
     homepage = "https://github.com/aio-libs/frozenlist";
-    changelog = "https://github.com/aio-libs/frozenlist/blob/v${version}/CHANGES.rst";
+    changelog = "https://github.com/aio-libs/frozenlist/blob/${src.tag}/CHANGES.rst";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/functions-framework/default.nix b/pkgs/development/python-modules/functions-framework/default.nix
index cd0e2177eba6..20cd253b2e0a 100644
--- a/pkgs/development/python-modules/functions-framework/default.nix
+++ b/pkgs/development/python-modules/functions-framework/default.nix
@@ -29,7 +29,7 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "GoogleCloudPlatform";
     repo = "functions-framework-python";
-    rev = "v${version}";
+    tag = "v${version}";
     hash = "sha256-TvC+URJtsquBX/5F5Z2Nw/4sD3hsvF2c/jlv87lGjfM=";
   };
 
@@ -67,7 +67,7 @@ buildPythonPackage rec {
   meta = {
     description = "FaaS (Function as a service) framework for writing portable Python functions";
     homepage = "https://github.com/GoogleCloudPlatform/functions-framework-python";
-    changelog = "https://github.com/GoogleCloudPlatform/functions-framework-python/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/GoogleCloudPlatform/functions-framework-python/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/functiontrace/default.nix b/pkgs/development/python-modules/functiontrace/default.nix
index 7da09ce41208..e08ca4340ac1 100644
--- a/pkgs/development/python-modules/functiontrace/default.nix
+++ b/pkgs/development/python-modules/functiontrace/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "functiontrace";
-  version = "0.3.10";
+  version = "0.5.1";
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-E2MNp3wKb9FEjEQK/vL/XBfScPuAwbWV5JeA9+ujckY=";
+    hash = "sha256-yRzcg8BDuwF74J2EYa/3GMkTaRGsx0WyDIQEWHwj12M=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/furo/default.nix b/pkgs/development/python-modules/furo/default.nix
index 71bc32d7a516..2bb4606fada4 100644
--- a/pkgs/development/python-modules/furo/default.nix
+++ b/pkgs/development/python-modules/furo/default.nix
@@ -1,48 +1,75 @@
 {
   lib,
+  buildNpmPackage,
   buildPythonPackage,
-  pythonOlder,
-  fetchPypi,
-  sphinx,
+  fetchFromGitHub,
+  flit-core,
+  accessible-pygments,
   beautifulsoup4,
+  pygments,
+  sphinx,
   sphinx-basic-ng,
 }:
 
-buildPythonPackage rec {
+let
   pname = "furo";
-  version = "2024.8.6";
-  format = "wheel";
+  version = "2025.07.19";
 
-  disabled = pythonOlder "3.8";
-
-  src = fetchPypi {
-    inherit pname version format;
-    dist = "py3";
-    python = "py3";
-    hash = "sha256-bNl8WLR4E9NhnmPpCBFpiA++Mx8MqIPIcf8fPxGBT1w=";
+  src = fetchFromGitHub {
+    owner = "pradyunsg";
+    repo = "furo";
+    tag = version;
+    hash = "sha256-pIF5zrh5YbkuSkrateEB/tDULSNbeVn2Qx+Fm3nOYGE=";
   };
 
+  web = buildNpmPackage {
+    pname = "${pname}-web";
+    inherit version src;
+
+    npmDepsHash = "sha256-dcdHoyqF9zC/eKtEqMho7TK2E1KIvoXo0iwSPTzj+Kw=";
+
+    installPhase = ''
+      pushd src/furo/theme/furo/static
+      mkdir $out
+      cp -rv scripts styles $out/
+      popd
+    '';
+  };
+in
+
+buildPythonPackage rec {
+  inherit pname version src;
+  pyproject = true;
+
+  postPatch = ''
+    # build with boring backend that does not manage a node env
+    substituteInPlace pyproject.toml \
+      --replace-fail "sphinx-theme-builder >= 0.2.0a10" "flit-core" \
+      --replace-fail "sphinx_theme_builder" "flit_core.buildapi"
+
+    pushd src/furo/theme/furo/static
+    cp -rv ${web}/{scripts,styles} .
+    popd
+  '';
+
+  build-system = [ flit-core ];
+
   pythonRelaxDeps = [ "sphinx" ];
 
-  propagatedBuildInputs = [
-    sphinx
+  dependencies = [
+    accessible-pygments
     beautifulsoup4
+    pygments
+    sphinx
     sphinx-basic-ng
   ];
 
-  installCheckPhase = ''
-    # furo was built incorrectly if this directory is empty
-    # Ignore the hidden file .gitignore
-    cd "$out/lib/python"*
-    if [ "$(ls 'site-packages/furo/theme/furo/static/' | wc -l)" -le 0 ]; then
-      echo 'static directory must not be empty'
-      exit 1
-    fi
-    cd -
-  '';
-
   pythonImportsCheck = [ "furo" ];
 
+  passthru = {
+    inherit web;
+  };
+
   meta = with lib; {
     description = "Clean customizable documentation theme for Sphinx";
     homepage = "https://github.com/pradyunsg/furo";
diff --git a/pkgs/development/python-modules/fyta-cli/default.nix b/pkgs/development/python-modules/fyta-cli/default.nix
index c81ec0c160a6..4c92997a7fa8 100644
--- a/pkgs/development/python-modules/fyta-cli/default.nix
+++ b/pkgs/development/python-modules/fyta-cli/default.nix
@@ -33,6 +33,8 @@ buildPythonPackage rec {
     mashumaro
   ];
 
+  doCheck = false; # Failed: async def functions are not natively supported.
+
   nativeCheckInputs = [
     aioresponses
     pytest-asyncio
diff --git a/pkgs/development/python-modules/gdsfactory/default.nix b/pkgs/development/python-modules/gdsfactory/default.nix
index cfd04c5ec56a..b591a368133f 100644
--- a/pkgs/development/python-modules/gdsfactory/default.nix
+++ b/pkgs/development/python-modules/gdsfactory/default.nix
@@ -46,14 +46,14 @@
 }:
 buildPythonPackage rec {
   pname = "gdsfactory";
-  version = "9.5.2";
+  version = "9.12.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "gdsfactory";
     repo = "gdsfactory";
     tag = "v${version}";
-    hash = "sha256-BcFEMcHt0qUQ0hTLSznuIH37rAk+10JGrPdrhE/sTfU=";
+    hash = "sha256-en976F8BjMK8Ku1QXz4MIxTs+mswVBascmGguPXeEbI=";
   };
 
   build-system = [ flit-core ];
diff --git a/pkgs/development/python-modules/geoalchemy2/default.nix b/pkgs/development/python-modules/geoalchemy2/default.nix
index ac3b0e6e2057..5609564aeb0c 100644
--- a/pkgs/development/python-modules/geoalchemy2/default.nix
+++ b/pkgs/development/python-modules/geoalchemy2/default.nix
@@ -8,13 +8,14 @@
   shapely,
   sqlalchemy,
   alembic,
+  pytest-benchmark,
   pytestCheckHook,
   pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "geoalchemy2";
-  version = "0.17.1";
+  version = "0.18.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -23,7 +24,7 @@ buildPythonPackage rec {
     owner = "geoalchemy";
     repo = "geoalchemy2";
     tag = version;
-    hash = "sha256-ze0AWwlmBsMUhbmaCNUeEwhFcLxRDeal0IDO421++ck=";
+    hash = "sha256-xQxry/JJTkhsailk12lhu1SkpLlx0By/D35VSw+S/4M=";
   };
 
   build-system = [
@@ -38,10 +39,13 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     alembic
+    pytest-benchmark
     pytestCheckHook
   ]
   ++ optional-dependencies.shapely;
 
+  pytestFlags = [ "--benchmark-disable" ];
+
   disabledTestPaths = [
     # tests require live databases
     "tests/gallery/test_decipher_raster.py"
diff --git a/pkgs/development/python-modules/geocachingapi/default.nix b/pkgs/development/python-modules/geocachingapi/default.nix
index 47364ccbea16..554df72a7009 100644
--- a/pkgs/development/python-modules/geocachingapi/default.nix
+++ b/pkgs/development/python-modules/geocachingapi/default.nix
@@ -33,6 +33,8 @@ buildPythonPackage rec {
     yarl
   ];
 
+  pythonRelaxDeps = [ "reverse_geocode" ];
+
   # Tests require a token and network access
   doCheck = false;
 
diff --git a/pkgs/development/python-modules/geoip2/default.nix b/pkgs/development/python-modules/geoip2/default.nix
index 01c3a58f6fb4..0a397725ac9c 100644
--- a/pkgs/development/python-modules/geoip2/default.nix
+++ b/pkgs/development/python-modules/geoip2/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "geoip2";
-  version = "5.0.1";
+  version = "5.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-kK+LbTaH877yUfJwitAXsw1ifRFEwAQOq8TJAXqAfYY=";
+    hash = "sha256-7j+H8M6TJetkhP4Yy9l3GgPQorrR3RVvo1hPr6Vi05o=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/geopandas/default.nix b/pkgs/development/python-modules/geopandas/default.nix
index 9d7d1e1d9bf4..3c9c36b0311b 100644
--- a/pkgs/development/python-modules/geopandas/default.nix
+++ b/pkgs/development/python-modules/geopandas/default.nix
@@ -1,11 +1,8 @@
 {
   lib,
-  stdenv,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
   pytestCheckHook,
-  pythonOlder,
   setuptools,
 
   packaging,
@@ -29,27 +26,16 @@
 
 buildPythonPackage rec {
   pname = "geopandas";
-  version = "1.0.1";
+  version = "1.1.1";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchFromGitHub {
     owner = "geopandas";
     repo = "geopandas";
     tag = "v${version}";
-    hash = "sha256-SZizjwkx8dsnaobDYpeQm9jeXZ4PlzYyjIScnQrH63Q=";
+    hash = "sha256-7ZsO4jresikA17M8cyHskdcVnTscGHxTCLJv5p1SvfI=";
   };
 
-  patches = [
-    (fetchpatch {
-      # Remove geom_almost_equals, because it broke with shapely 2.1.0 and is not being updated
-      url = "https://github.com/geopandas/geopandas/commit/0e1f871a02e9612206dcadd6817284131026f61c.patch";
-      excludes = [ "CHANGELOG.md" ];
-      hash = "sha256-n9AmmbjjNwV66lxDQV2hfkVVfxRgMfEGfHZT6bql684=";
-    })
-  ];
-
   build-system = [ setuptools ];
 
   dependencies = [
@@ -102,7 +88,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python geospatial data analysis framework";
     homepage = "https://geopandas.org";
-    changelog = "https://github.com/geopandas/geopandas/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/geopandas/geopandas/blob/${src.tag}/CHANGELOG.md";
     license = licenses.bsd3;
     teams = [ teams.geospatial ];
   };
diff --git a/pkgs/development/python-modules/geopy/default.nix b/pkgs/development/python-modules/geopy/default.nix
index b9cf371ab744..6da0af5310e9 100644
--- a/pkgs/development/python-modules/geopy/default.nix
+++ b/pkgs/development/python-modules/geopy/default.nix
@@ -4,7 +4,7 @@
   docutils,
   fetchFromGitHub,
   geographiclib,
-  pytestCheckHook,
+  pytest7CheckHook,
   pythonAtLeast,
   pythonOlder,
   pytz,
@@ -27,7 +27,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     docutils
-    pytestCheckHook
+    pytest7CheckHook
     pytz
   ];
 
diff --git a/pkgs/development/python-modules/gevent/default.nix b/pkgs/development/python-modules/gevent/default.nix
index bc996a338ab3..4158ef056ad5 100644
--- a/pkgs/development/python-modules/gevent/default.nix
+++ b/pkgs/development/python-modules/gevent/default.nix
@@ -11,10 +11,8 @@
   greenlet,
   importlib-metadata,
   setuptools,
-  wheel,
   zope-event,
   zope-interface,
-  pythonOlder,
   c-ares,
   libuv,
 
@@ -26,20 +24,17 @@
 
 buildPythonPackage rec {
   pname = "gevent";
-  version = "24.11.1";
-  format = "pyproject";
-
-  disabled = pythonOlder "3.7";
+  version = "25.5.1";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-i9FBkRTp5KPtM6W612av/5o892XLRApYKhs6m8gMGso=";
+    hash = "sha256-WCyUj6miMYi4kNC8Ewc0pQbQOaLlrYfa4nakVsxoPmE=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     cython
     setuptools
-    wheel
   ]
   ++ lib.optionals (!isPyPy) [ cffi ];
 
@@ -49,7 +44,7 @@ buildPythonPackage rec {
     c-ares
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     importlib-metadata
     zope-event
     zope-interface
diff --git a/pkgs/development/python-modules/githubkit/default.nix b/pkgs/development/python-modules/githubkit/default.nix
index 4b8b24fdf04b..b24fdbe1e639 100644
--- a/pkgs/development/python-modules/githubkit/default.nix
+++ b/pkgs/development/python-modules/githubkit/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "githubkit";
-  version = "0.12.13";
+  version = "0.13.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "yanyongyu";
     repo = "githubkit";
     tag = "v${version}";
-    hash = "sha256-TMn81YY44bXUyU6GHSGtLtQ7aC2/vA9nZf/PaGhBi0s=";
+    hash = "sha256-BhTGik8JZ9QxE8zmfgToU7rVkY8T5iykJx4Bg4evyzY=";
   };
 
   pythonRelaxDeps = [ "hishel" ];
diff --git a/pkgs/development/python-modules/gitingest/default.nix b/pkgs/development/python-modules/gitingest/default.nix
index cbd1942461cb..f78f92500c83 100644
--- a/pkgs/development/python-modules/gitingest/default.nix
+++ b/pkgs/development/python-modules/gitingest/default.nix
@@ -28,14 +28,14 @@
 
 buildPythonPackage rec {
   pname = "gitingest";
-  version = "0.1.5";
+  version = "0.3.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "cyclotruc";
     repo = "gitingest";
     tag = "v${version}";
-    hash = "sha256-f/srwLhTXboSlW28qnShqTuc2yLMuHH3MyzfKpDIitQ=";
+    hash = "sha256-drsncGneZyOCC2GJbrDM+bf4QGI2luacxMhrmdk03l4=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/gitpython/default.nix b/pkgs/development/python-modules/gitpython/default.nix
index e3e9d05ae8d8..5bfda634e136 100644
--- a/pkgs/development/python-modules/gitpython/default.nix
+++ b/pkgs/development/python-modules/gitpython/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "gitpython";
-  version = "3.1.44";
+  version = "3.1.45";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "gitpython-developers";
     repo = "GitPython";
     tag = version;
-    hash = "sha256-KnKaBv/tKk4wiGWUWCEgd1vgrTouwUhqxJ1/nMjRaWk=";
+    hash = "sha256-VHnuHliZEc/jiSo/Zi9J/ipAykj7D6NttuzPZiE8svM=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/glean-parser/default.nix b/pkgs/development/python-modules/glean-parser/default.nix
index cdb94a007b64..fb91ab4ebe95 100644
--- a/pkgs/development/python-modules/glean-parser/default.nix
+++ b/pkgs/development/python-modules/glean-parser/default.nix
@@ -4,34 +4,29 @@
   click,
   diskcache,
   fetchPypi,
+  hatchling,
+  hatch-vcs,
   jinja2,
   jsonschema,
   platformdirs,
   pytestCheckHook,
   pyyaml,
-  setuptools,
-  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "glean-parser";
-  version = "17.1.0";
+  version = "17.3.0";
   pyproject = true;
 
   src = fetchPypi {
     pname = "glean_parser";
     inherit version;
-    hash = "sha256-pZq2bdc0qL6n16LLYyJ2YC3YmUEe4cHLifQ5qDO6FZg=";
+    hash = "sha256-9w+0SWQ2Bo+B73hgKaGzafYa4vkyfusvpQM126We4hQ=";
   };
 
-  postPatch = ''
-    substituteInPlace setup.py \
-      --replace-fail "pytest-runner" ""
-  '';
-
   build-system = [
-    setuptools
-    setuptools-scm
+    hatchling
+    hatch-vcs
   ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/globus-sdk/default.nix b/pkgs/development/python-modules/globus-sdk/default.nix
index d0fda3d3ef12..f63db1ad80ce 100644
--- a/pkgs/development/python-modules/globus-sdk/default.nix
+++ b/pkgs/development/python-modules/globus-sdk/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "globus-sdk";
-  version = "3.61.0";
+  version = "3.62.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "globus";
     repo = "globus-sdk-python";
     tag = version;
-    hash = "sha256-DFLWFdwgKLhGde8ZH40YJ2434cl9nSrEfU6DfHANChE=";
+    hash = "sha256-uvvv96ztvzCmXx63brvnoKcfXUsDgZA9cNeCB7jdawQ=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/glocaltokens/default.nix b/pkgs/development/python-modules/glocaltokens/default.nix
index 42f0d66968a1..118ef46fe4d7 100644
--- a/pkgs/development/python-modules/glocaltokens/default.nix
+++ b/pkgs/development/python-modules/glocaltokens/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "glocaltokens";
-  version = "0.7.5";
+  version = "0.7.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "leikoilja";
     repo = "glocaltokens";
     tag = "v${version}";
-    hash = "sha256-anIiYNUVHHzv21yV7Y3S+lIst3iWEwgQZD9Ymx86tbk=";
+    hash = "sha256-+7HpyZUumu1r/UXM4awckjTkpVbCz7MsAJOp2JiJzho=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/glueviz/default.nix b/pkgs/development/python-modules/glueviz/default.nix
index 31d3a412118c..e33d009e8748 100644
--- a/pkgs/development/python-modules/glueviz/default.nix
+++ b/pkgs/development/python-modules/glueviz/default.nix
@@ -26,7 +26,7 @@
 
 buildPythonPackage rec {
   pname = "glueviz";
-  version = "1.22.2";
+  version = "1.23.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -35,7 +35,7 @@ buildPythonPackage rec {
     owner = "glue-viz";
     repo = "glue";
     tag = "v${version}";
-    hash = "sha256-5YwZxVer3icA/7YmUIXTuyIlZYKrlFn5+4OYMbfvIlU=";
+    hash = "sha256-Ql5eMyMm48zNLQ3tkPyqM4+r3QfxqVAGHx1/LcLUiyo=";
   };
 
   buildInputs = [ pyqt-builder ];
diff --git a/pkgs/development/python-modules/glyphslib/default.nix b/pkgs/development/python-modules/glyphslib/default.nix
index 3cd569339bf0..5827c8bdabef 100644
--- a/pkgs/development/python-modules/glyphslib/default.nix
+++ b/pkgs/development/python-modules/glyphslib/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "glyphslib";
-  version = "6.11.0";
+  version = "6.11.4";
 
   pyproject = true;
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "googlefonts";
     repo = "glyphsLib";
     tag = "v${version}";
-    hash = "sha256-hJLJ30ZT6uRSVTUi6XPGyn9fncy1A1hvhgRKTL9a2gs=";
+    hash = "sha256-gOzETXI2ZgW69qxbrXxsXfBEJaVhYrcqwjRjCsryqmk=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/google-api-core/default.nix b/pkgs/development/python-modules/google-api-core/default.nix
index 76b7f78528eb..9269c2d259cd 100644
--- a/pkgs/development/python-modules/google-api-core/default.nix
+++ b/pkgs/development/python-modules/google-api-core/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "google-api-core";
-  version = "2.24.2";
+  version = "2.25.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "googleapis";
     repo = "python-api-core";
     tag = "v${version}";
-    hash = "sha256-7/9oU8KqwvL7DIDKDIUlGxfJZp7kGp1W6/tsEp6zcuc=";
+    hash = "sha256-lh4t03upQQxY2KGwucXfEeNvqVVXlZ6hjR/e47imetk=";
   };
 
   build-system = [ setuptools ];
@@ -86,7 +86,7 @@ buildPythonPackage rec {
       helpers used by all Google API clients.
     '';
     homepage = "https://github.com/googleapis/python-api-core";
-    changelog = "https://github.com/googleapis/python-api-core/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/googleapis/python-api-core/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/google-api-python-client/default.nix b/pkgs/development/python-modules/google-api-python-client/default.nix
index 35a3b4b54d75..304595531a24 100644
--- a/pkgs/development/python-modules/google-api-python-client/default.nix
+++ b/pkgs/development/python-modules/google-api-python-client/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "google-api-python-client";
-  version = "2.169.0";
+  version = "2.177.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-api-python-client";
     tag = "v${version}";
-    hash = "sha256-XJwZ/gWL2pO9P+HuN6BtVbacNjwbZV2jW6FVLgNsj/0=";
+    hash = "sha256-CEjbUIXtG5z1/28DsNCm/npMSd/+DyY5PMJHm9XDe2M=";
   };
 
   build-system = [ setuptools ];
@@ -43,7 +43,7 @@ buildPythonPackage rec {
       any new features.
     '';
     homepage = "https://github.com/google/google-api-python-client";
-    changelog = "https://github.com/googleapis/google-api-python-client/releases/tag/v${version}";
+    changelog = "https://github.com/googleapis/google-api-python-client/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/google-auth/default.nix b/pkgs/development/python-modules/google-auth/default.nix
index 1990720e3159..e0389c8f8f41 100644
--- a/pkgs/development/python-modules/google-auth/default.nix
+++ b/pkgs/development/python-modules/google-auth/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "google-auth";
-  version = "2.40.2";
+  version = "2.40.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-auth-library-python";
     tag = "v${version}";
-    hash = "sha256-jO6brNdTH8BitLKKP/nwrlUo5hfQnThT/bPbzefvRbM=";
+    hash = "sha256-X1HTh24oos2GUxB9DDLtNH7BsBRLD0S/ngjsDAQYvhI=";
   };
 
   build-system = [ setuptools ];
@@ -64,6 +64,8 @@ buildPythonPackage rec {
     requests = [ requests ];
   };
 
+  pythonRelaxDeps = [ "cachetools" ];
+
   nativeCheckInputs = [
     aioresponses
     flask
@@ -101,7 +103,7 @@ buildPythonPackage rec {
       authentication mechanisms to access Google APIs.
     '';
     homepage = "https://github.com/googleapis/google-auth-library-python";
-    changelog = "https://github.com/googleapis/google-auth-library-python/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/googleapis/google-auth-library-python/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/google-cloud-artifact-registry/default.nix b/pkgs/development/python-modules/google-cloud-artifact-registry/default.nix
index b5016ef74760..965c6bab7362 100644
--- a/pkgs/development/python-modules/google-cloud-artifact-registry/default.nix
+++ b/pkgs/development/python-modules/google-cloud-artifact-registry/default.nix
@@ -7,6 +7,7 @@
   lib,
   proto-plus,
   protobuf,
+  pytest-asyncio,
   pytestCheckHook,
   pythonOlder,
   setuptools,
@@ -36,7 +37,10 @@ buildPythonPackage rec {
   ]
   ++ google-api-core.optional-dependencies.grpc;
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [
+    pytest-asyncio
+    pytestCheckHook
+  ];
 
   pythonImportsCheck = [
     "google.cloud.artifactregistry"
diff --git a/pkgs/development/python-modules/google-cloud-asset/default.nix b/pkgs/development/python-modules/google-cloud-asset/default.nix
index 6c8f06f8d6f3..6cc9e31a97f5 100644
--- a/pkgs/development/python-modules/google-cloud-asset/default.nix
+++ b/pkgs/development/python-modules/google-cloud-asset/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-asset";
-  version = "3.30.1";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-cloud-asset-v${version}";
-    sha256 = "sha256-4Ifg9igzsVR8pWH/lcrGwCnByqYQjPKChNPJGmmQbKI=";
+    tag = "google-cloud-build-v${version}";
+    sha256 = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-cloud-asset";
@@ -76,7 +76,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python Client for Google Cloud Asset API";
     homepage = "https://github.com/googleapis/google-cloud-python/tree/main/packages/google-cloud-asset";
-    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-asset-v${version}/packages/google-cloud-asset/CHANGELOG.md";
+    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-asset-${src.tag}/packages/google-cloud-asset/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/google-cloud-bigquery-storage/default.nix b/pkgs/development/python-modules/google-cloud-bigquery-storage/default.nix
index 2d63743221f3..f146ff26ee1d 100644
--- a/pkgs/development/python-modules/google-cloud-bigquery-storage/default.nix
+++ b/pkgs/development/python-modules/google-cloud-bigquery-storage/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-bigquery-storage";
-  version = "2.30.0";
+  version = "2.32.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "google_cloud_bigquery_storage";
     inherit version;
-    hash = "sha256-QayD+p7dvIIBAhd5hKuS+Le736fZDqZLOgr17LT8o/I=";
+    hash = "sha256-6UT19DhfC+J+BJ5z5NzPVIt3NIMBZjp3O10Dq9vUniA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/google-cloud-bigquery/default.nix b/pkgs/development/python-modules/google-cloud-bigquery/default.nix
index b98ab101924b..73cb6d083298 100644
--- a/pkgs/development/python-modules/google-cloud-bigquery/default.nix
+++ b/pkgs/development/python-modules/google-cloud-bigquery/default.nix
@@ -37,13 +37,13 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-bigquery";
-  version = "3.31.0";
+  version = "3.35.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "google_cloud_bigquery";
     inherit version;
-    hash = "sha256-uJ3HFtvkq9t6T4c/cFAQAoe8mFFOBhTF1UzWqOn7CZE=";
+    hash = "sha256-WZ8mys8ZCs/ogAD2zF9Lyea6rHiZ5PQGygVPGQb3GWA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/google-cloud-container/default.nix b/pkgs/development/python-modules/google-cloud-container/default.nix
index 46434bc8abab..ee481619546d 100644
--- a/pkgs/development/python-modules/google-cloud-container/default.nix
+++ b/pkgs/development/python-modules/google-cloud-container/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-container";
-  version = "2.58.0";
+  version = "2.59.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "google_cloud_container";
     inherit version;
-    hash = "sha256-dA7lsWf3BmxIXXnPejksi21A7N9V0Ka27MeET8TNmts=";
+    hash = "sha256-ZsTKUV0zzGbzf9jltrqJBjsG66sz4UlbjEJMcgs/tgM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/google-cloud-datacatalog/default.nix b/pkgs/development/python-modules/google-cloud-datacatalog/default.nix
index de60cd24d2a3..86061cedbc54 100644
--- a/pkgs/development/python-modules/google-cloud-datacatalog/default.nix
+++ b/pkgs/development/python-modules/google-cloud-datacatalog/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-datacatalog";
-  version = "3.27.1";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-cloud-datacatalog-v${version}";
-    hash = "sha256-4Ifg9igzsVR8pWH/lcrGwCnByqYQjPKChNPJGmmQbKI=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-cloud-datacatalog";
@@ -57,7 +57,7 @@ buildPythonPackage rec {
   meta = {
     description = "Google Cloud Data Catalog API API client library";
     homepage = "https://github.com/googleapis/google-cloud-python/tree/main/packages/google-cloud-datacatalog";
-    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-datacatalog-v${version}/packages/google-cloud-datacatalog/CHANGELOG.md";
+    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-datacatalog-${src.tag}/packages/google-cloud-datacatalog/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/google-cloud-iam/default.nix b/pkgs/development/python-modules/google-cloud-iam/default.nix
index a9f77a1c8582..21e96f3e9aa9 100644
--- a/pkgs/development/python-modules/google-cloud-iam/default.nix
+++ b/pkgs/development/python-modules/google-cloud-iam/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-iam";
-  version = "2.19.0";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-cloud-iam-v${version}";
-    hash = "sha256-E1LISOLQcXqUMTTPLR+lwkR6gF1fuGGB44j38cIK/Z4=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-cloud-iam";
diff --git a/pkgs/development/python-modules/google-cloud-kms/default.nix b/pkgs/development/python-modules/google-cloud-kms/default.nix
index b671e36c0c90..7dafc791f334 100644
--- a/pkgs/development/python-modules/google-cloud-kms/default.nix
+++ b/pkgs/development/python-modules/google-cloud-kms/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-kms";
-  version = "3.4.1";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-cloud-kms-v${version}";
-    hash = "sha256-5PzidE1CWN+pt7+gcAtbuXyL/pq6cnn0MCRkBfmeUSw=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-cloud-kms";
diff --git a/pkgs/development/python-modules/google-cloud-netapp/default.nix b/pkgs/development/python-modules/google-cloud-netapp/default.nix
index 8cb21256a174..7b8efdc6c254 100644
--- a/pkgs/development/python-modules/google-cloud-netapp/default.nix
+++ b/pkgs/development/python-modules/google-cloud-netapp/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-netapp";
-  version = "0.3.23";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    rev = "google-cloud-netapp-v${version}";
-    hash = "sha256-ietiyPCghGUD1jlGdZMhVgVozAlyfdvYgkV6NNlzLQg=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-cloud-netapp";
@@ -55,7 +55,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python Client for NetApp API";
     homepage = "https://github.com/googleapis/google-cloud-python/tree/main/packages/google-cloud-netapp";
-    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-netapp-v${version}/packages/google-cloud-netapp/CHANGELOG.md";
+    changelog = "https://github.com/googleapis/google-cloud-python/blob/google-cloud-netapp-${src.tag}/packages/google-cloud-netapp/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/google-cloud-storage/default.nix b/pkgs/development/python-modules/google-cloud-storage/default.nix
index 431672efee5a..84fa74f9e9e0 100644
--- a/pkgs/development/python-modules/google-cloud-storage/default.nix
+++ b/pkgs/development/python-modules/google-cloud-storage/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "google-cloud-storage";
-  version = "3.1.0";
+  version = "3.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "google_cloud_storage";
     inherit version;
-    hash = "sha256-lEJzF5iXx8igfuFfLmRmoC2gx8S57M6sKiYBfLKXIEk=";
+    hash = "sha256-3syoQwdgNvRWMxmMEl0YYf+/R+v1wOO5jcubLbFViWw=";
   };
 
   pythonRelaxDeps = [ "google-auth" ];
diff --git a/pkgs/development/python-modules/google-genai/default.nix b/pkgs/development/python-modules/google-genai/default.nix
index 76c5c3b78d66..35a27dd48fd0 100644
--- a/pkgs/development/python-modules/google-genai/default.nix
+++ b/pkgs/development/python-modules/google-genai/default.nix
@@ -12,6 +12,7 @@
   pytestCheckHook,
   requests,
   setuptools,
+  tenacity,
   twine,
   typing-extensions,
   websockets,
@@ -19,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "google-genai";
-  version = "1.20.0";
+  version = "1.28.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "python-genai";
     tag = "v${version}";
-    hash = "sha256-7DwLIK3/VCVSt9lq0Q0IRbhfLXOWw1TbPpDgI4jr9cg=";
+    hash = "sha256-tQ6iWIUUl9mtWz6Pa0tBOsoGcFQNe62NqXhob53AVq4=";
   };
 
   build-system = [
@@ -36,7 +37,9 @@ buildPythonPackage rec {
     twine
   ];
 
-  pythonRelaxDeps = [ "websockets" ];
+  pythonRelaxDeps = [
+    "tenacity"
+  ];
 
   dependencies = [
     anyio
@@ -44,6 +47,7 @@ buildPythonPackage rec {
     httpx
     pydantic
     requests
+    tenacity
     typing-extensions
     websockets
   ];
diff --git a/pkgs/development/python-modules/google-geo-type/default.nix b/pkgs/development/python-modules/google-geo-type/default.nix
index 5bacb21694c7..4dff787e4bf7 100644
--- a/pkgs/development/python-modules/google-geo-type/default.nix
+++ b/pkgs/development/python-modules/google-geo-type/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "google-geo-type";
-  version = "0.3.13";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-geo-type-v${version}";
-    hash = "sha256-VYkgkVrUgBiUEFF2J8ZFrh2Sw7h653stYxNcpYfRAj4=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-geo-type";
diff --git a/pkgs/development/python-modules/google-maps-routing/default.nix b/pkgs/development/python-modules/google-maps-routing/default.nix
index a6b7031eb30b..d2669fb55b7d 100644
--- a/pkgs/development/python-modules/google-maps-routing/default.nix
+++ b/pkgs/development/python-modules/google-maps-routing/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "google-maps-routing";
-  version = "0.6.16";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "google-maps-routing-v${version}";
-    hash = "sha256-VYkgkVrUgBiUEFF2J8ZFrh2Sw7h653stYxNcpYfRAj4=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/google-maps-routing";
diff --git a/pkgs/development/python-modules/google-re2/default.nix b/pkgs/development/python-modules/google-re2/default.nix
index dea16732f29a..da3a9ab52a23 100644
--- a/pkgs/development/python-modules/google-re2/default.nix
+++ b/pkgs/development/python-modules/google-re2/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "google-re2";
-  version = "1.1.20240702";
+  version = "1.1.20250722";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "google_re2";
     inherit version;
-    hash = "sha256-h4jbafbJPLIp32LHSy2aqOZL91TpSVcA+FgSr6Mu/Ss=";
+    hash = "sha256-XipGTfddvO+f4Nrxinj3PD8KUbgc24ZUYKBXmyJvLvM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/googleapis-common-protos/default.nix b/pkgs/development/python-modules/googleapis-common-protos/default.nix
index 5195d3472c5f..0c065525c0ce 100644
--- a/pkgs/development/python-modules/googleapis-common-protos/default.nix
+++ b/pkgs/development/python-modules/googleapis-common-protos/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "googleapis-common-protos";
-  version = "1.70.0";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    rev = "googleapis-common-protos-v${version}";
-    hash = "sha256-E1LISOLQcXqUMTTPLR+lwkR6gF1fuGGB44j38cIK/Z4=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/googleapis-common-protos";
@@ -50,7 +50,7 @@ buildPythonPackage rec {
   meta = {
     description = "Common protobufs used in Google APIs";
     homepage = "https://github.com/googleapis/python-api-common-protos";
-    changelog = "https://github.com/googleapis/python-api-common-protos/releases/tag/v${version}";
+    changelog = "https://github.com/googleapis/python-api-common-protos/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = [ lib.maintainers.sarahec ];
   };
diff --git a/pkgs/development/python-modules/gotrue/default.nix b/pkgs/development/python-modules/gotrue/default.nix
index 8ef7436ecc04..28cdc92a1307 100644
--- a/pkgs/development/python-modules/gotrue/default.nix
+++ b/pkgs/development/python-modules/gotrue/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "gotrue";
-  version = "2.12.0";
+  version = "2.12.3";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ueoWTuUpZNg2TFUM3hbdDpV2JBpM/+qlLsozn2HR0Us=";
+    hash = "sha256-+HTPnQsvAzW/vQ1uKeP3r/eZmM0cFNKtgU24wGzuOFI=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/gpsoauth/default.nix b/pkgs/development/python-modules/gpsoauth/default.nix
index d40d2f3c6174..bf604c9f7138 100644
--- a/pkgs/development/python-modules/gpsoauth/default.nix
+++ b/pkgs/development/python-modules/gpsoauth/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "gpsoauth";
-  version = "1.1.1";
+  version = "2.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-WCAu0wM5fSkntGTcleJxS///haGw+Iv2jzrWOFnr5DU=";
+    hash = "sha256-njt2WmpOA2TewbxBV70+1+XsMGZYnihdC0aYaRCqa9I=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/gql/default.nix b/pkgs/development/python-modules/gql/default.nix
index 42141609db83..93a380706c89 100644
--- a/pkgs/development/python-modules/gql/default.nix
+++ b/pkgs/development/python-modules/gql/default.nix
@@ -11,7 +11,7 @@
   httpx,
   mock,
   parse,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-console-scripts,
   pytestCheckHook,
   pythonOlder,
@@ -51,7 +51,7 @@ buildPythonPackage rec {
     aiofiles
     mock
     parse
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-console-scripts
     pytestCheckHook
     vcrpy
diff --git a/pkgs/development/python-modules/gradient/default.nix b/pkgs/development/python-modules/gradient/default.nix
index 36c3e2d82495..f8a9896b1f8b 100644
--- a/pkgs/development/python-modules/gradient/default.nix
+++ b/pkgs/development/python-modules/gradient/default.nix
@@ -24,12 +24,12 @@
 
 buildPythonPackage rec {
   pname = "gradient";
-  version = "2.0.6";
+  version = "2.99.3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pqyyNzx2YPP3qmWQbzGd3q2HzCkrWlIVSJZeFrGm9dk=";
+    hash = "sha256-Ep3Qh9Q1xWt2JveCf/A/KInQ3cnGE7D1YNdavDS0ZE8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/graphql-core/default.nix b/pkgs/development/python-modules/graphql-core/default.nix
index fa1aa996d623..c1c49ee45448 100644
--- a/pkgs/development/python-modules/graphql-core/default.nix
+++ b/pkgs/development/python-modules/graphql-core/default.nix
@@ -6,27 +6,23 @@
   pytest-benchmark,
   pytest-asyncio,
   pytestCheckHook,
-  pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "graphql-core";
-  version = "3.2.5";
+  version = "3.2.6";
   pyproject = true;
 
-  disabled = pythonOlder "3.6";
-
   src = fetchFromGitHub {
     owner = "graphql-python";
     repo = "graphql-core";
     tag = "v${version}";
-    hash = "sha256-xZOiQOFWnImDXuvHP9V6BDjIZwlwHSxN/os+UYV4A0M=";
+    hash = "sha256-RkVyoTSVmtKhs42IK+oOrOL4uBs3As3N5KY0Sz1VaDQ=";
   };
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-      --replace-fail "poetry_core>=1,<2" "poetry-core" \
-      --replace-fail ', "setuptools>=59,<70"' ""
+      --replace-fail ', "setuptools>=59,<76"' ""
   '';
 
   build-system = [
@@ -44,7 +40,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "graphql" ];
 
   meta = with lib; {
-    changelog = "https://github.com/graphql-python/graphql-core/releases/tag/v${version}";
+    changelog = "https://github.com/graphql-python/graphql-core/releases/tag/${src.tag}";
     description = "Port of graphql-js to Python";
     homepage = "https://github.com/graphql-python/graphql-core";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/graphrag/default.nix b/pkgs/development/python-modules/graphrag/default.nix
index 606bf11bb936..f44129f282af 100644
--- a/pkgs/development/python-modules/graphrag/default.nix
+++ b/pkgs/development/python-modules/graphrag/default.nix
@@ -40,14 +40,14 @@
 
 buildPythonPackage rec {
   pname = "graphrag";
-  version = "1.2.0";
+  version = "2.4.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "graphrag";
-    tag = "v${version}";
-    hash = "sha256-z3gO0wV8YBNi2Z53avujAt/Es9mSzugEFa/qRgq7ItM=";
+    tag = "v.${version}";
+    hash = "sha256-a8t6Nl9W/Cr7eueAvJ3dbz5G0oIhddqFMIm7HeZ8N9A=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/great-expectations/default.nix b/pkgs/development/python-modules/great-expectations/default.nix
index ca563093c75e..8ba61a03efae 100644
--- a/pkgs/development/python-modules/great-expectations/default.nix
+++ b/pkgs/development/python-modules/great-expectations/default.nix
@@ -40,14 +40,14 @@
 
 buildPythonPackage rec {
   pname = "great-expectations";
-  version = "1.3.2";
+  version = "1.5.7";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "great-expectations";
     repo = "great_expectations";
     tag = version;
-    hash = "sha256-MV6T8PyOyAQ2SfT8B38YdCtqj6oeZCW+z08koBR739A=";
+    hash = "sha256-pa44metr9KP2KF2ulq7kd84BVdBMvMhsWJeBsJ2AnG0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/greenlet/default.nix b/pkgs/development/python-modules/greenlet/default.nix
index aecb96244991..03638e41377b 100644
--- a/pkgs/development/python-modules/greenlet/default.nix
+++ b/pkgs/development/python-modules/greenlet/default.nix
@@ -1,4 +1,5 @@
 {
+  stdenv,
   lib,
   buildPythonPackage,
   fetchPypi,
@@ -16,12 +17,12 @@
 let
   greenlet = buildPythonPackage rec {
     pname = "greenlet";
-    version = "3.2.2";
+    version = "3.2.3";
     pyproject = true;
 
     src = fetchPypi {
       inherit pname version;
-      hash = "sha256-rQU9NEIaLeu6Rao8w5rPRUrLzQJbP8Gp+KDe4jer1IU=";
+      hash = "sha256-iw3YrkwNb15U7lW6k17rPXNam1iooeW1y6tk4Bo582U=";
     };
 
     build-system = [ setuptools ];
@@ -35,6 +36,9 @@ let
       unittestCheckHook
     ];
 
+    # https://github.com/python-greenlet/greenlet/issues/395
+    env.NIX_CFLAGS_COMPILE = lib.optionalString stdenv.hostPlatform.isPower64 "-fomit-frame-pointer";
+
     preCheck = ''
       pushd ${placeholder "out"}/${python.sitePackages}
     '';
diff --git a/pkgs/development/python-modules/greynoise/default.nix b/pkgs/development/python-modules/greynoise/default.nix
index 716e0fc1b498..935b0220e619 100644
--- a/pkgs/development/python-modules/greynoise/default.nix
+++ b/pkgs/development/python-modules/greynoise/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "greynoise";
-  version = "2.3.0";
+  version = "3.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "GreyNoise-Intelligence";
     repo = "pygreynoise";
     tag = "v${version}";
-    hash = "sha256-17NieDQ57qVT2i4S26vLS9N6zALZ+eTtCCcBbhQ8fhQ=";
+    hash = "sha256-wJDO666HC3EohfR+LbG5F0Cp/eL7q4kXniWhJfc7C3s=";
   };
 
   propagatedBuildInputs = [
@@ -57,7 +57,7 @@ buildPythonPackage rec {
     description = "Python3 library and command line for GreyNoise";
     mainProgram = "greynoise";
     homepage = "https://github.com/GreyNoise-Intelligence/pygreynoise";
-    changelog = "https://github.com/GreyNoise-Intelligence/pygreynoise/blob/${src.rev}/CHANGELOG.rst";
+    changelog = "https://github.com/GreyNoise-Intelligence/pygreynoise/blob/${src.tag}/CHANGELOG.rst";
     license = licenses.mit;
     maintainers = with maintainers; [ mbalatsko ];
   };
diff --git a/pkgs/development/python-modules/griffe/default.nix b/pkgs/development/python-modules/griffe/default.nix
index 375ff0c717cd..33c4c9f5a4e1 100644
--- a/pkgs/development/python-modules/griffe/default.nix
+++ b/pkgs/development/python-modules/griffe/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "griffe";
-  version = "1.8.0";
+  version = "1.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mkdocstrings";
     repo = "griffe";
     tag = version;
-    hash = "sha256-p+igAui0LNMj8tMBmw59K8mNdixqfxU8P9lHDZkoFaY=";
+    hash = "sha256-kP3n9NJ9dW8S2zEMAHgtWbJUQiYt7NadgrR7DD67+Vs=";
   };
 
   build-system = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/grpc-google-iam-v1/default.nix b/pkgs/development/python-modules/grpc-google-iam-v1/default.nix
index c0aaca146664..aba72a96b8aa 100644
--- a/pkgs/development/python-modules/grpc-google-iam-v1/default.nix
+++ b/pkgs/development/python-modules/grpc-google-iam-v1/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "grpc-google-iam-v1";
-  version = "0.14.2";
+  version = "3.31.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "googleapis";
     repo = "google-cloud-python";
-    tag = "grpc-google-iam-v1-v${version}";
-    hash = "sha256-5PzidE1CWN+pt7+gcAtbuXyL/pq6cnn0MCRkBfmeUSw=";
+    tag = "google-cloud-build-v${version}";
+    hash = "sha256-qQ+8X6I8lt4OTgbvODsbdab2dYUk0wxWsbaVT2T651U=";
   };
 
   sourceRoot = "${src.name}/packages/grpc-google-iam-v1";
diff --git a/pkgs/development/python-modules/grpclib/default.nix b/pkgs/development/python-modules/grpclib/default.nix
index c9553e5c81b1..35494aa1d7ce 100644
--- a/pkgs/development/python-modules/grpclib/default.nix
+++ b/pkgs/development/python-modules/grpclib/default.nix
@@ -8,7 +8,7 @@
   googleapis-common-protos,
   h2,
   multidict,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pythonOlder,
   setuptools,
@@ -37,7 +37,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     pytestCheckHook
-    pytest-asyncio
+    pytest-asyncio_0
     async-timeout
     faker
     googleapis-common-protos
diff --git a/pkgs/development/python-modules/guidance/default.nix b/pkgs/development/python-modules/guidance/default.nix
index 2f9c1bfe8ffd..ed279cf885ae 100644
--- a/pkgs/development/python-modules/guidance/default.nix
+++ b/pkgs/development/python-modules/guidance/default.nix
@@ -36,14 +36,14 @@
 
 buildPythonPackage rec {
   pname = "guidance";
-  version = "0.2.1";
+  version = "0.2.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "guidance-ai";
     repo = "guidance";
     tag = version;
-    hash = "sha256-FBnND9kCIVmE/IEz3TNOww8x0EAH6TTBYfKTprqSbDg=";
+    hash = "sha256-dTMJOBGirEumbpTanCVZQJATfLxqxmpUCqE7pah97Zw=";
   };
 
   build-system = [
@@ -119,7 +119,7 @@ buildPythonPackage rec {
   meta = {
     description = "Guidance language for controlling large language models";
     homepage = "https://github.com/guidance-ai/guidance";
-    changelog = "https://github.com/guidance-ai/guidance/releases/tag/v${version}";
+    changelog = "https://github.com/guidance-ai/guidance/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ natsukium ];
   };
diff --git a/pkgs/development/python-modules/gym-notices/default.nix b/pkgs/development/python-modules/gym-notices/default.nix
index 0a4e2bd4089c..1132fa795d5b 100644
--- a/pkgs/development/python-modules/gym-notices/default.nix
+++ b/pkgs/development/python-modules/gym-notices/default.nix
@@ -2,18 +2,22 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "gym-notices";
-  version = "0.0.8";
-  format = "setuptools";
+  version = "0.1.0";
+  pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-rSXiAEh8r6NpcoYl/gZOiK2hNGYYUmECZZtGQPK0uRE=";
+    pname = "gym_notices";
+    inherit version;
+    hash = "sha256-n5R372iowV5CYl1PpTYxI34+aulH8yW1wUnAgUma3Bs=";
   };
 
+  build-system = [ setuptools ];
+
   pythonImportsCheck = [ "gym_notices" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/h3/default.nix b/pkgs/development/python-modules/h3/default.nix
index f1379544ba21..5d9b87746bfc 100644
--- a/pkgs/development/python-modules/h3/default.nix
+++ b/pkgs/development/python-modules/h3/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "h3";
-  version = "4.2.2";
+  version = "4.3.0";
   pyproject = true;
 
   # pypi version does not include tests
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "uber";
     repo = "h3-py";
     tag = "v${version}";
-    hash = "sha256-HvJT5SuE7UHhGMlaQG3YSHfGkgsdDAVVGsGRsAeNHGQ=";
+    hash = "sha256-D2imgxGzJpOEQ3xddM42SKWPZEIwuXQ31mm8ZIQhqkE=";
   };
 
   dontConfigure = true;
diff --git a/pkgs/development/python-modules/h5py/default.nix b/pkgs/development/python-modules/h5py/default.nix
index cd43c0e05798..1deb3ab9f2cf 100644
--- a/pkgs/development/python-modules/h5py/default.nix
+++ b/pkgs/development/python-modules/h5py/default.nix
@@ -22,7 +22,7 @@ let
   mpiSupport = hdf5.mpiSupport;
 in
 buildPythonPackage rec {
-  version = "3.13.0";
+  version = "3.14.0";
   pname = "h5py";
   pyproject = true;
 
@@ -30,7 +30,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-GHDkZRhyACPahdCJWhlg/yzjmMVnHqw7GkHsaWtxBcM=";
+    hash = "sha256-I3IRay4NXT5ecFt/Zj98jZb6eaQFLSUEhO+R0k1qCPQ=";
   };
 
   pythonRelaxDeps = [ "mpi4py" ];
diff --git a/pkgs/development/python-modules/ha-silabs-firmware-client/default.nix b/pkgs/development/python-modules/ha-silabs-firmware-client/default.nix
index 2264a9a20d2f..dd983d98cdd4 100644
--- a/pkgs/development/python-modules/ha-silabs-firmware-client/default.nix
+++ b/pkgs/development/python-modules/ha-silabs-firmware-client/default.nix
@@ -4,6 +4,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   lib,
+  pytest-asyncio,
   pytestCheckHook,
   pythonOlder,
   setuptools,
@@ -41,6 +42,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     aioresponses
+    pytest-asyncio
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/habluetooth/default.nix b/pkgs/development/python-modules/habluetooth/default.nix
index ab77d4cdfeb1..b491a740e1d4 100644
--- a/pkgs/development/python-modules/habluetooth/default.nix
+++ b/pkgs/development/python-modules/habluetooth/default.nix
@@ -33,6 +33,11 @@ buildPythonPackage rec {
     hash = "sha256-82eV76oY/exkHbhZt3OaifOoKxN2D6npstvfBDVgszw=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail 'Cython>=3,<3.1' 'Cython'
+  '';
+
   build-system = [
     cython
     poetry-core
diff --git a/pkgs/development/python-modules/hass-nabucasa/default.nix b/pkgs/development/python-modules/hass-nabucasa/default.nix
index 15bbb7d091ab..4dfcb4a63f91 100644
--- a/pkgs/development/python-modules/hass-nabucasa/default.nix
+++ b/pkgs/development/python-modules/hass-nabucasa/default.nix
@@ -43,6 +43,7 @@ buildPythonPackage rec {
   pythonRelaxDeps = [
     "acme"
     "josepy"
+    "snitun"
   ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/hassil/default.nix b/pkgs/development/python-modules/hassil/default.nix
index 9c68f8c18c3c..ec274094ab26 100644
--- a/pkgs/development/python-modules/hassil/default.nix
+++ b/pkgs/development/python-modules/hassil/default.nix
@@ -2,7 +2,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  pythonOlder,
 
   # build-system
   setuptools,
@@ -17,9 +16,9 @@
 
 let
   pname = "hassil";
-  version = "2.2.3";
+  version = "3.1.0";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   inherit pname version;
   pyproject = true;
 
@@ -27,7 +26,7 @@ buildPythonPackage {
     owner = "home-assistant";
     repo = "hassil";
     tag = "v${version}";
-    hash = "sha256-rP7F0BovD0Klf06lywo+1uFhPf+dS0qbNBZluun8+cE=";
+    hash = "sha256-GwlnlOeG4uMMbT09Nm+UIr5FcOJf00+7r/2Kls4Rb4g=";
   };
 
   build-system = [ setuptools ];
@@ -39,8 +38,13 @@ buildPythonPackage {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
+  disabledTestPaths = [
+    # infinite recursion with home-assistant.intents
+    "tests/test_fuzzy.py"
+  ];
+
   meta = with lib; {
-    changelog = "https://github.com/home-assistant/hassil/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/home-assistant/hassil/blob/${src.tag}/CHANGELOG.md";
     description = "Intent parsing for Home Assistant";
     mainProgram = "hassil";
     homepage = "https://github.com/home-assistant/hassil";
diff --git a/pkgs/development/python-modules/hatch-fancy-pypi-readme/default.nix b/pkgs/development/python-modules/hatch-fancy-pypi-readme/default.nix
index c8efd2065cc4..61b5824ba7b7 100644
--- a/pkgs/development/python-modules/hatch-fancy-pypi-readme/default.nix
+++ b/pkgs/development/python-modules/hatch-fancy-pypi-readme/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "hatch-fancy-pypi-readme";
-  version = "24.1.0";
+  version = "25.1.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "hatch_fancy_pypi_readme";
     inherit version;
-    hash = "sha256-RN0jnxp3m53PjryUAaYR/X9+PhRXjc8iwmXfr3wVFLg=";
+    hash = "sha256-nFjtPf+Q1R9DQUzjcAmtHVsPCP/J/CFpmKBjgPAcAEU=";
   };
 
   nativeBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/hatch-nodejs-version/default.nix b/pkgs/development/python-modules/hatch-nodejs-version/default.nix
index 376f3f1390a2..e46a1d40b92f 100644
--- a/pkgs/development/python-modules/hatch-nodejs-version/default.nix
+++ b/pkgs/development/python-modules/hatch-nodejs-version/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "hatch-nodejs-version";
-  version = "0.3.2";
+  version = "0.4.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "agoose77";
     repo = "hatch-nodejs-version";
     tag = "v${version}";
-    hash = "sha256-hknlb11DCe+b55CfF3Pr62ccWPxVrjQ197ZagSiH/zU=";
+    hash = "sha256-Oe07HFzhhnAGTWM51xSgRmpJgIZg0oMIxkmMxKRPMwI=";
   };
 
   propagatedBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/hatch-vcs/default.nix b/pkgs/development/python-modules/hatch-vcs/default.nix
index e3be83a0f2d4..2bdb4e7622a5 100644
--- a/pkgs/development/python-modules/hatch-vcs/default.nix
+++ b/pkgs/development/python-modules/hatch-vcs/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "hatch-vcs";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "hatch_vcs";
     inherit version;
-    hash = "sha256-CTgQdI/gHbDUUfq88sGsJojK79Iy1O3pZwkLHBsH2fc=";
+    hash = "sha256-A5X6EmlANAIVCQw0Siv04qd7y+faqxb0Gze5jJWAn/k=";
   };
 
   build-system = [ hatchling ];
@@ -35,15 +35,8 @@ buildPythonPackage rec {
   ];
 
   disabledTests = [
-    # incompatible with setuptools-scm>=7
-    # https://github.com/ofek/hatch-vcs/issues/8
-    "test_write"
-  ]
-  ++ lib.optionals (pythonOlder "3.11") [
-    # https://github.com/pypa/setuptools_scm/issues/1038, fixed in setuptools_scm@8.1.0
-    "test_basic"
-    "test_root"
-    "test_metadata"
+    # reacts to our setup-hook pretending a version
+    "test_custom_tag_pattern_get_version"
   ];
 
   pythonImportsCheck = [ "hatch_vcs" ];
diff --git a/pkgs/development/python-modules/haystack-ai/default.nix b/pkgs/development/python-modules/haystack-ai/default.nix
index dec9d6684d27..ba792ffa3e7f 100644
--- a/pkgs/development/python-modules/haystack-ai/default.nix
+++ b/pkgs/development/python-modules/haystack-ai/default.nix
@@ -91,14 +91,14 @@
 
 buildPythonPackage rec {
   pname = "haystack-ai";
-  version = "2.9.0";
+  version = "2.16.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "deepset-ai";
     repo = "haystack";
     tag = "v${version}";
-    hash = "sha256-h/4KskpzO3+e6aLQlBb8yitmfdbdc+J6Hz6TMs8bnr8=";
+    hash = "sha256-Z5T5X92Hig7nW1fUc8b+LuegJlIZbMfyjJ0PnVudPew=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/hg-evolve/default.nix b/pkgs/development/python-modules/hg-evolve/default.nix
index d332237010f2..a6f28d87a60d 100644
--- a/pkgs/development/python-modules/hg-evolve/default.nix
+++ b/pkgs/development/python-modules/hg-evolve/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "hg-evolve";
-  version = "11.1.8";
+  version = "11.1.9";
   pyproject = true;
 
   src = fetchPypi {
     pname = "hg_evolve";
     inherit version;
-    hash = "sha256-JIberZCiRmxPkn0P+Dsps42jHWhkA1hLKGXPlbb+APU=";
+    hash = "sha256-sypSfUqXQkmDSITJq/XHH82EGNIMvjgocc+3mLK+n0A=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/hid-parser/default.nix b/pkgs/development/python-modules/hid-parser/default.nix
index 1106accebf07..91cb21d24cfa 100644
--- a/pkgs/development/python-modules/hid-parser/default.nix
+++ b/pkgs/development/python-modules/hid-parser/default.nix
@@ -1,26 +1,28 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
-  setuptools,
-  pytest7CheckHook,
+  fetchFromGitHub,
+  flit-core,
+  pytestCheckHook,
   hypothesis,
 }:
 
 buildPythonPackage rec {
   pname = "hid-parser";
-  version = "0.0.3";
-  format = "pyproject";
+  version = "0.1.0";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-zbm+h+ieDmd1K0uH+9B8EWtYScxqYJXVpY9bXdBivA4=";
+  src = fetchFromGitHub {
+    owner = "usb-tools";
+    repo = "python-hid-parser";
+    tag = version;
+    hash = "sha256-8aGyLTsBK5etwbqFkNinbLHCt20fsQEmuBvu3RrwCDA=";
   };
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [ flit-core ];
 
   nativeCheckInputs = [
-    pytest7CheckHook
+    pytestCheckHook
     hypothesis
   ];
 
diff --git a/pkgs/development/python-modules/hijri-converter/default.nix b/pkgs/development/python-modules/hijri-converter/default.nix
deleted file mode 100644
index f99bddec4593..000000000000
--- a/pkgs/development/python-modules/hijri-converter/default.nix
+++ /dev/null
@@ -1,32 +0,0 @@
-{
-  lib,
-  buildPythonPackage,
-  fetchPypi,
-  pytestCheckHook,
-  pythonOlder,
-}:
-
-buildPythonPackage rec {
-  pname = "hijri-converter";
-  version = "2.3.1";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-BptniSkeCDD0hgp53NNPs87qO5VRbtQBAgK5ZWuhq2E=";
-  };
-
-  nativeCheckInputs = [ pytestCheckHook ];
-
-  pythonImportsCheck = [ "hijri_converter" ];
-
-  meta = with lib; {
-    description = "Accurate Hijri-Gregorian date converter based on the Umm al-Qura calendar";
-    homepage = "https://github.com/dralshehri/hijri-converter";
-    changelog = "https://github.com/dralshehri/hijridate/blob/v${version}/CHANGELOG.md";
-    license = licenses.mit;
-    maintainers = with maintainers; [ hexa ];
-  };
-}
diff --git a/pkgs/development/python-modules/hijridate/default.nix b/pkgs/development/python-modules/hijridate/default.nix
new file mode 100644
index 000000000000..904159b7144a
--- /dev/null
+++ b/pkgs/development/python-modules/hijridate/default.nix
@@ -0,0 +1,38 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  hatchling,
+  hatch-fancy-pypi-readme,
+  pytestCheckHook,
+}:
+
+buildPythonPackage rec {
+  pname = "hijridate";
+  version = "2.5.0";
+  pyproject = true;
+
+  src = fetchFromGitHub {
+    owner = "dralshehri";
+    repo = "hijridate";
+    tag = "v${version}";
+    hash = "sha256-IT5OnFDuNQ9tMfuZ5pFqnAPd7nspIfAmeN6Pqtn0OwA=";
+  };
+
+  build-system = [
+    hatchling
+    hatch-fancy-pypi-readme
+  ];
+
+  nativeCheckInputs = [ pytestCheckHook ];
+
+  pythonImportsCheck = [ "hijridate" ];
+
+  meta = with lib; {
+    description = "Accurate Hijri-Gregorian date converter based on the Umm al-Qura calendar";
+    homepage = "https://github.com/dralshehri/hijridate";
+    changelog = "https://github.com/dralshehri/hijridate/blob/v${version}/CHANGELOG.md";
+    license = licenses.mit;
+    maintainers = with maintainers; [ hexa ];
+  };
+}
diff --git a/pkgs/development/python-modules/hikari-crescent/default.nix b/pkgs/development/python-modules/hikari-crescent/default.nix
index 28e809136ed3..b13050474204 100644
--- a/pkgs/development/python-modules/hikari-crescent/default.nix
+++ b/pkgs/development/python-modules/hikari-crescent/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "hikari-crescent";
-  version = "1.2.0";
+  version = "1.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "hikari-crescent";
     repo = "hikari-crescent";
     tag = "v${version}";
-    hash = "sha256-aQjT5sAaqConUtRGcqddzwcbBJkbwYOCxvnNJpKu3yI=";
+    hash = "sha256-wFWltwhayvv/zkIWMGogjTqy/qZfO1hUU6CzF3T9E1Y=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/hikari-lightbulb/default.nix b/pkgs/development/python-modules/hikari-lightbulb/default.nix
index f9af95b70147..92d2ea4d1f0f 100644
--- a/pkgs/development/python-modules/hikari-lightbulb/default.nix
+++ b/pkgs/development/python-modules/hikari-lightbulb/default.nix
@@ -2,30 +2,30 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  setuptools,
-  wheel,
+  flit-core,
   hikari,
   croniter,
+  typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "hikari-lightbulb";
-  version = "2.3.5.post1";
+  version = "3.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "tandemdude";
     repo = "hikari-lightbulb";
     tag = version;
-    hash = "sha256-sxBrOgMgUcPjqtNuuq5+NfyxR5V812dfHnGoO9DhdXU=";
+    hash = "sha256-hsd7K7VFXndQ3tE8UkIcFXADgG/Kjd2oNWdFvwAwUtw=";
   };
 
-  nativeBuildInputs = [
-    setuptools
-    wheel
-  ];
+  build-system = [ flit-core ];
 
-  propagatedBuildInputs = [ hikari ];
+  dependencies = [
+    hikari
+    typing-extensions
+  ];
 
   optional-dependencies = {
     crontrigger = [ croniter ];
@@ -34,6 +34,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "lightbulb" ];
 
   meta = with lib; {
+    broken = true; # missing linkd and confspec dependencies
     description = "Command handler for Hikari, the Python Discord API wrapper library";
     longDescription = ''
       Lightbulb is designed to be an easy to use command handler library that integrates with the Discord API wrapper library for Python, Hikari.
diff --git a/pkgs/development/python-modules/hikari/default.nix b/pkgs/development/python-modules/hikari/default.nix
index 7be50c2b2d2b..ee7fce10d6fc 100644
--- a/pkgs/development/python-modules/hikari/default.nix
+++ b/pkgs/development/python-modules/hikari/default.nix
@@ -4,6 +4,7 @@
   fetchFromGitHub,
   pytestCheckHook,
   pythonOlder,
+  hatchling,
   aiohttp,
   attrs,
   multidict,
@@ -16,14 +17,14 @@
 }:
 buildPythonPackage rec {
   pname = "hikari";
-  version = "2.1.0";
-  format = "setuptools";
+  version = "2.3.5";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "hikari-py";
     repo = "hikari";
     tag = version;
-    hash = "sha256-/A3D3nG1lSCQU92dM+6YroxWlGKrv47ntkZaJZTAJUA=";
+    hash = "sha256-jcPgO4tJKHzrA1fFeksSL9PVMsxnHuzh4CLVwTq06sM=";
     # The git commit is part of the `hikari.__git_sha1__` original output;
     # leave that output the same in nixpkgs. Use the `.git` directory
     # to retrieve the commit SHA, and remove the directory afterwards,
@@ -36,6 +37,8 @@ buildPythonPackage rec {
     '';
   };
 
+  build-system = [ hatchling ];
+
   propagatedBuildInputs = [
     aiohttp
     attrs
@@ -72,7 +75,7 @@ buildPythonPackage rec {
   meta = {
     description = "Discord API wrapper for Python written with asyncio";
     homepage = "https://www.hikari-py.dev/";
-    changelog = "https://github.com/hikari-py/hikari/releases/tag/${version}";
+    changelog = "https://github.com/hikari-py/hikari/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [
       tomodachi94
diff --git a/pkgs/development/python-modules/holidays/default.nix b/pkgs/development/python-modules/holidays/default.nix
index 5ec47d5f6efc..95e439e827d0 100644
--- a/pkgs/development/python-modules/holidays/default.nix
+++ b/pkgs/development/python-modules/holidays/default.nix
@@ -60,7 +60,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Generate and work with holidays in Python";
     homepage = "https://github.com/vacanza/python-holidays";
-    changelog = "https://github.com/vacanza/python-holidays/releases/tag/v${version}";
+    changelog = "https://github.com/vacanza/python-holidays/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [
       fab
diff --git a/pkgs/development/python-modules/home-assistant-bluetooth/default.nix b/pkgs/development/python-modules/home-assistant-bluetooth/default.nix
index dfa41a0bfedf..d1ea3bd04662 100644
--- a/pkgs/development/python-modules/home-assistant-bluetooth/default.nix
+++ b/pkgs/development/python-modules/home-assistant-bluetooth/default.nix
@@ -2,7 +2,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
   pythonOlder,
 
   # build-system
@@ -20,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "home-assistant-bluetooth";
-  version = "1.13.1";
+  version = "2.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -29,18 +28,9 @@ buildPythonPackage rec {
     owner = "home-assistant-libs";
     repo = "home-assistant-bluetooth";
     tag = "v${version}";
-    hash = "sha256-piX812Uzd2F8A8+IF/17N+xy6ENpfRVJ1BxsAxL5aj0=";
+    hash = "sha256-A29Jezj9kQ/v4irvpcpCiZlrNQBQwByrSJOx4HaXTdc=";
   };
 
-  patches = [
-    (fetchpatch {
-      name = "fix-tests-with-habluetooth-3.42.0.patch";
-      url = "https://github.com/home-assistant-libs/home-assistant-bluetooth/commit/515516bf9b2577c5d4af25cd2f052023ccb8b108.patch";
-      includes = [ "tests/test_models.py" ];
-      hash = "sha256-9t8VRKQSDxSYiy7bFII62B4O5w5Hx9AbRgvzcT6z1BQ=";
-    })
-  ];
-
   build-system = [
     poetry-core
     setuptools
diff --git a/pkgs/development/python-modules/html2image/default.nix b/pkgs/development/python-modules/html2image/default.nix
index 4e5d1d50dbd6..bca718a33311 100644
--- a/pkgs/development/python-modules/html2image/default.nix
+++ b/pkgs/development/python-modules/html2image/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "html2image";
-  version = "2.0.5";
+  version = "2.0.7";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "vgalin";
     repo = "html2image";
     tag = version;
-    hash = "sha256-k5y89nUF+fhUj9uzTAPkkAdOb2TsTL2jm/ZXwHlxu/A=";
+    hash = "sha256-qGp6i4fNmduTZfdxNvYJTAQV/Ovm3XFNOJ8uSj6Ipic=";
   };
 
   postPatch = ''
@@ -37,7 +37,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Package acting as a wrapper around the headless mode of existing web browsers to generate images from URLs and from HTML+CSS strings or files";
     homepage = "https://github.com/vgalin/html2image";
-    changelog = "https://github.com/vgalin/html2image/releases/tag/${version}";
+    changelog = "https://github.com/vgalin/html2image/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ happysalada ];
   };
diff --git a/pkgs/development/python-modules/html2text/default.nix b/pkgs/development/python-modules/html2text/default.nix
index 656370931ca4..bf13a97b9561 100644
--- a/pkgs/development/python-modules/html2text/default.nix
+++ b/pkgs/development/python-modules/html2text/default.nix
@@ -5,11 +5,12 @@
   pythonOlder,
   pytestCheckHook,
   setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "html2text";
-  version = "2024.2.26";
+  version = "2025.4.15";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,10 +19,13 @@ buildPythonPackage rec {
     owner = "Alir3z4";
     repo = "html2text";
     tag = version;
-    hash = "sha256-1CLkTFR+/XQ428WjMF7wliyAG6CB+n8JSsLDdLHPO7I=";
+    hash = "sha256-SMdILvCVXMe3Tlf3kK54VfEKsQ/KvpBZK3xZ4zVwcfo=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
@@ -30,7 +34,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Turn HTML into equivalent Markdown-structured text";
     homepage = "https://github.com/Alir3z4/html2text/";
-    changelog = "https://github.com/Alir3z4/html2text/blob/${src.rev}/ChangeLog.rst";
+    changelog = "https://github.com/Alir3z4/html2text/blob/${src.tag}/ChangeLog.rst";
     license = licenses.gpl3Only;
     maintainers = [ ];
     mainProgram = "html2text";
diff --git a/pkgs/development/python-modules/htmldate/default.nix b/pkgs/development/python-modules/htmldate/default.nix
index 9fa529db9c2d..c97199f97a3d 100644
--- a/pkgs/development/python-modules/htmldate/default.nix
+++ b/pkgs/development/python-modules/htmldate/default.nix
@@ -38,6 +38,8 @@ buildPythonPackage rec {
     urllib3
   ];
 
+  pythonRelaxDeps = [ "lxml" ];
+
   optional-dependencies = {
     speed = [
       faust-cchardet
diff --git a/pkgs/development/python-modules/http-message-signatures/default.nix b/pkgs/development/python-modules/http-message-signatures/default.nix
index d3fcc3296dad..c5877acb8119 100644
--- a/pkgs/development/python-modules/http-message-signatures/default.nix
+++ b/pkgs/development/python-modules/http-message-signatures/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "http-message-signatures";
-  version = "0.5.0";
+  version = "1.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,8 +20,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pyauth";
     repo = "http-message-signatures";
-    rev = "v${version}";
-    hash = "sha256-Jsivw4lNA/2oqsOGGx8D4gUPftzuys877A9RXyapnSQ=";
+    tag = "v${version}";
+    hash = "sha256-vPZeAS3hR7Bmj2FtME+V9WU3TViBndrBb9GLkdMVh2Q=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/httpx-sse/default.nix b/pkgs/development/python-modules/httpx-sse/default.nix
index 622e8ae033d4..a719fe96f369 100644
--- a/pkgs/development/python-modules/httpx-sse/default.nix
+++ b/pkgs/development/python-modules/httpx-sse/default.nix
@@ -2,10 +2,8 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch2,
   setuptools,
   setuptools-scm,
-  wheel,
   httpx,
   pytest-asyncio,
   pytestCheckHook,
@@ -14,23 +12,16 @@
 
 buildPythonPackage rec {
   pname = "httpx-sse";
-  version = "0.4.0";
+  version = "0.4.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "florimondmanca";
     repo = "httpx-sse";
     tag = version;
-    hash = "sha256-nU8vkmV/WynzQrSrq9+FQXtfAJPVLpMsRSuntU0HWrE=";
+    hash = "sha256-bSozSZmbRU5sc3jvVUOAXQWVBA8GhzM2R26uPdabS+w=";
   };
 
-  patches = [
-    (fetchpatch2 {
-      url = "https://github.com/florimondmanca/httpx-sse/commit/643938c805e671fa20adcf314b447f862b77bcda.patch?full_index=1";
-      hash = "sha256-V2PyTlleyoLa0DuvdlU8zGNsI9C8bTjMUcLjx81/e5k=";
-    })
-  ];
-
   # pytest-cov configuration is not necessary for packaging
   postPatch = ''
     rm setup.cfg
@@ -39,7 +30,6 @@ buildPythonPackage rec {
   build-system = [
     setuptools
     setuptools-scm
-    wheel
   ];
 
   dependencies = [ httpx ];
@@ -55,7 +45,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Consume Server-Sent Event (SSE) messages with HTTPX";
     homepage = "https://github.com/florimondmanca/httpx-sse";
-    changelog = "https://github.com/florimondmanca/httpx-sse/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/florimondmanca/httpx-sse/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ natsukium ];
   };
diff --git a/pkgs/development/python-modules/hydra-core/default.nix b/pkgs/development/python-modules/hydra-core/default.nix
index 132c8faba6a7..92ff70c9020b 100644
--- a/pkgs/development/python-modules/hydra-core/default.nix
+++ b/pkgs/development/python-modules/hydra-core/default.nix
@@ -20,7 +20,7 @@
   packaging,
 
   # tests
-  pytestCheckHook,
+  pytest8_3CheckHook,
   pythonAtLeast,
 }:
 
@@ -70,7 +70,7 @@ buildPythonPackage rec {
     packaging
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest8_3CheckHook ];
 
   pytestFlags = [
     "-Wignore::UserWarning"
diff --git a/pkgs/development/python-modules/hyperion-py/default.nix b/pkgs/development/python-modules/hyperion-py/default.nix
index 5cb6a69ec2ac..a6803e8bc26e 100644
--- a/pkgs/development/python-modules/hyperion-py/default.nix
+++ b/pkgs/development/python-modules/hyperion-py/default.nix
@@ -5,7 +5,7 @@
   fetchFromGitHub,
   poetry-core,
   pytest-aiohttp,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-cov-stub,
   pytest-timeout,
   pytestCheckHook,
@@ -28,8 +28,8 @@ buildPythonPackage rec {
   dependencies = [ aiohttp ];
 
   nativeCheckInputs = [
-    pytest-asyncio
-    pytest-aiohttp
+    pytest-asyncio_0
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
     pytest-cov-stub
     pytest-timeout
     pytestCheckHook
diff --git a/pkgs/development/python-modules/hyperscan/default.nix b/pkgs/development/python-modules/hyperscan/default.nix
index 8850d1a53283..e63a155781d3 100644
--- a/pkgs/development/python-modules/hyperscan/default.nix
+++ b/pkgs/development/python-modules/hyperscan/default.nix
@@ -23,14 +23,14 @@ let
 in
 buildPythonPackage rec {
   pname = "hyperscan";
-  version = "0.7.16";
+  version = "0.7.22";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "darvid";
     repo = "python-hyperscan";
     tag = "v${version}";
-    hash = "sha256-iinBu/6zSbRiuxytHnS3G+8OffcdLdCTqKzj44NQqcU=";
+    hash = "sha256-99PkxxGCwyGa5xhfHLa7+1JnTgcRfDEKcTRopGzqkh8=";
   };
 
   env.CMAKE_ARGS = "-DHS_SRC_ROOT=${pkgs.hyperscan.src} -DHS_BUILD_LIB_ROOT=${lib-deps}/lib";
diff --git a/pkgs/development/python-modules/hypothesis/default.nix b/pkgs/development/python-modules/hypothesis/default.nix
index a46583e063b5..ea6abf7e8384 100644
--- a/pkgs/development/python-modules/hypothesis/default.nix
+++ b/pkgs/development/python-modules/hypothesis/default.nix
@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "hypothesis";
-  version = "6.131.17";
+  version = "6.136.9";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -32,8 +32,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "HypothesisWorks";
     repo = "hypothesis";
-    rev = "hypothesis-python-${version}";
-    hash = "sha256-bNaDC2n0VaI7L4/FdD8eQ4cqn5ewquy89wV/pQn9uo0=";
+    tag = "hypothesis-python-${version}";
+    hash = "sha256-Q1wxIJwAYKZ0x6c85CJSGgcdKw9a3xFw8YpJROElSNU=";
   };
 
   # I tried to package sphinx-selective-exclude, but it throws
diff --git a/pkgs/development/python-modules/ibis-framework/default.nix b/pkgs/development/python-modules/ibis-framework/default.nix
index e800262be966..2939b7c2ab9c 100644
--- a/pkgs/development/python-modules/ibis-framework/default.nix
+++ b/pkgs/development/python-modules/ibis-framework/default.nix
@@ -98,14 +98,14 @@ in
 
 buildPythonPackage rec {
   pname = "ibis-framework";
-  version = "10.5.0";
+  version = "10.8.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ibis-project";
     repo = "ibis";
     tag = version;
-    hash = "sha256-KJPl5bkD/tQlHY2k0b9zok5YCPekaXw7Y9z8P4AD3FQ=";
+    hash = "sha256-Uuqm9Exu/oK3BGBL4ViUOGArMWhVutUn1gFRj1I4vt4=";
   };
 
   build-system = [
@@ -142,6 +142,7 @@ buildPythonPackage rec {
 
   pytestFlags = [
     "--benchmark-disable"
+    "-Wignore::FutureWarning"
   ];
 
   enabledTestMarks = testBackends ++ [ "core" ];
@@ -353,7 +354,7 @@ buildPythonPackage rec {
   meta = {
     description = "Productivity-centric Python Big Data Framework";
     homepage = "https://github.com/ibis-project/ibis";
-    changelog = "https://github.com/ibis-project/ibis/blob/${version}/docs/release_notes.md";
+    changelog = "https://github.com/ibis-project/ibis/blob/${src.tag}/docs/release_notes.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [
       cpcloud
diff --git a/pkgs/development/python-modules/icalendar/default.nix b/pkgs/development/python-modules/icalendar/default.nix
index a7ed92051f65..c483932f3d4f 100644
--- a/pkgs/development/python-modules/icalendar/default.nix
+++ b/pkgs/development/python-modules/icalendar/default.nix
@@ -48,6 +48,8 @@ buildPythonPackage rec {
     # AssertionError: assert {'Atlantic/Jan_Mayen'} == {'Arctic/Longyearbyen'}
     "test_dateutil_timezone_is_matched_with_tzname"
     "test_docstring_of_python_file"
+    # AssertionError: assert $TZ not in set()
+    "test_add_missing_timezones_to_example"
   ];
 
   enabledTestPaths = [ "src/icalendar" ];
diff --git a/pkgs/development/python-modules/icecream/default.nix b/pkgs/development/python-modules/icecream/default.nix
index 6ae3f20ad9ad..f3ed505cfae5 100644
--- a/pkgs/development/python-modules/icecream/default.nix
+++ b/pkgs/development/python-modules/icecream/default.nix
@@ -18,12 +18,12 @@
 
 buildPythonPackage rec {
   pname = "icecream";
-  version = "2.1.4";
+  version = "2.1.5";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-WHVeWDl9U1CnbyWXbe57YH9f67PG4c3f5rGVGJbpFXM=";
+    hash = "sha256-FNIeM4MyammowaO88R+DKDRZ8NJp7OWvg/ziwNZj7+w=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/imagecodecs/default.nix b/pkgs/development/python-modules/imagecodecs/default.nix
index 30dfe4dc7de7..6d0411ce16d9 100644
--- a/pkgs/development/python-modules/imagecodecs/default.nix
+++ b/pkgs/development/python-modules/imagecodecs/default.nix
@@ -21,9 +21,9 @@
 }:
 
 let
-  version = "2025.3.30";
+  version = "2025.8.2";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "imagecodecs";
   inherit version;
   pyproject = true;
@@ -32,7 +32,7 @@ buildPythonPackage {
     owner = "cgohlke";
     repo = "imagecodecs";
     tag = "v${version}";
-    hash = "sha256-KtrQNABQOr3mNiWOfaZBcFceSCixPGV8Hte2uPKn1+k=";
+    hash = "sha256-HDyA5SQNZe9G83ARfvD4AAIIos8Oatp+RhnEQTdnRp4=";
   };
 
   build-system = [
@@ -83,7 +83,7 @@ buildPythonPackage {
   meta = {
     description = "Image transformation, compression, and decompression codecs";
     homepage = "https://github.com/cgohlke/imagecodecs";
-    changelog = "https://github.com/cgohlke/imagecodecs/blob/v${version}/CHANGES.rst";
+    changelog = "https://github.com/cgohlke/imagecodecs/blob/${src.tag}/CHANGES.rst";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ yzx9 ];
   };
diff --git a/pkgs/development/python-modules/imagededup/default.nix b/pkgs/development/python-modules/imagededup/default.nix
index 4ecc2f693c78..d5993e358643 100644
--- a/pkgs/development/python-modules/imagededup/default.nix
+++ b/pkgs/development/python-modules/imagededup/default.nix
@@ -33,7 +33,7 @@ let
 in
 buildPythonPackage rec {
   pname = "imagededup";
-  version = "0.3.2";
+  version = "03.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -42,7 +42,7 @@ buildPythonPackage rec {
     owner = "idealo";
     repo = "imagededup";
     tag = "v${version}";
-    hash = "sha256-B2IuNMTZnzBi6IxrHBoMDsmIcqGQpznd/2f1XKo1Oa4=";
+    hash = "sha256-tm6WGf74xu3CcwpyeA7+rvO5wemO0daXpj/jvYrH19E=";
   };
 
   nativeBuildInputs = [
@@ -88,7 +88,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     homepage = "https://idealo.github.io/imagededup/";
-    changelog = "https://github.com/idealo/imagededup/releases/tag/v${version}";
+    changelog = "https://github.com/idealo/imagededup/releases/tag/${src.tag}";
     description = "Finding duplicate images made easy";
     license = licenses.asl20;
     maintainers = with maintainers; [ stunkymonkey ];
diff --git a/pkgs/development/python-modules/imap-tools/default.nix b/pkgs/development/python-modules/imap-tools/default.nix
index e71956c5835e..ec192f63fbc0 100644
--- a/pkgs/development/python-modules/imap-tools/default.nix
+++ b/pkgs/development/python-modules/imap-tools/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "imap-tools";
-  version = "1.10.0";
+  version = "1.11.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ikvk";
     repo = "imap_tools";
     tag = "v${version}";
-    hash = "sha256-lan12cHkoxCKadgyFey4ShcnwFg3Gl/VqKWlYAkvF3Y=";
+    hash = "sha256-8oPiCFoJ0mV7ZnteM9lufIbxwA/7hV91959weEx/e30=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/inkbird-ble/default.nix b/pkgs/development/python-modules/inkbird-ble/default.nix
index b2a31ed4c13c..4d507af22ac1 100644
--- a/pkgs/development/python-modules/inkbird-ble/default.nix
+++ b/pkgs/development/python-modules/inkbird-ble/default.nix
@@ -6,6 +6,7 @@
   fetchFromGitHub,
   home-assistant-bluetooth,
   poetry-core,
+  pytest-asyncio,
   pytest-cov-stub,
   pytestCheckHook,
   pythonOlder,
@@ -36,6 +37,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    pytest-asyncio
     pytest-cov-stub
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/inkex/default.nix b/pkgs/development/python-modules/inkex/default.nix
index 3195032e03e9..534aa8ae551d 100644
--- a/pkgs/development/python-modules/inkex/default.nix
+++ b/pkgs/development/python-modules/inkex/default.nix
@@ -27,7 +27,10 @@ buildPythonPackage {
 
   build-system = [ poetry-core ];
 
-  pythonRelaxDeps = [ "numpy" ];
+  pythonRelaxDeps = [
+    "lxml"
+    "numpy"
+  ];
 
   dependencies = [
     cssselect
diff --git a/pkgs/development/python-modules/inline-snapshot/default.nix b/pkgs/development/python-modules/inline-snapshot/default.nix
index 635bdf36c530..bff769ab1ec5 100644
--- a/pkgs/development/python-modules/inline-snapshot/default.nix
+++ b/pkgs/development/python-modules/inline-snapshot/default.nix
@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "inline-snapshot";
-  version = "0.23.0";
+  version = "0.24.0";
   pyproject = true;
 
   src = fetchFromGitHub {
diff --git a/pkgs/development/python-modules/instructor/default.nix b/pkgs/development/python-modules/instructor/default.nix
index 97c1d863d189..959449e53e76 100644
--- a/pkgs/development/python-modules/instructor/default.nix
+++ b/pkgs/development/python-modules/instructor/default.nix
@@ -23,6 +23,7 @@
   anthropic,
   diskcache,
   fastapi,
+  google-genai,
   google-generativeai,
   pytest-asyncio,
   pytestCheckHook,
@@ -32,16 +33,14 @@
 
 buildPythonPackage rec {
   pname = "instructor";
-  version = "1.7.9";
+  version = "1.10.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchFromGitHub {
     owner = "jxnl";
     repo = "instructor";
     tag = version;
-    hash = "sha256-3IwvbepDrylOIlL+IteyFChqYc/ZIu6IieIkbAPL+mw=";
+    hash = "sha256-vknPfRHyLoLo2838p/fbjrqyaBORZzLp9+fN98yVDz0=";
   };
 
   build-system = [ hatchling ];
@@ -65,6 +64,7 @@ buildPythonPackage rec {
     anthropic
     diskcache
     fastapi
+    google-genai
     google-generativeai
     pytest-asyncio
     pytestCheckHook
@@ -90,12 +90,20 @@ buildPythonPackage rec {
     # Performance benchmarks that sometimes fail when running many parallel builds
     "test_combine_system_messages_benchmark"
     "test_extract_system_messages_benchmark"
+
+    # pydantic validation mismatch
+    "test_control_characters_not_allowed_in_anthropic_json_strict_mode"
+    "test_control_characters_allowed_in_anthropic_json_non_strict_mode"
   ];
 
   disabledTestPaths = [
     # Tests require OpenAI API key
-    "tests/test_distil.py"
     "tests/llm/"
+    # Network and requires API keys
+    "tests/test_auto_client.py"
+    # annoying dependencies
+    "tests/docs"
+    "examples"
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/intensity-normalization/default.nix b/pkgs/development/python-modules/intensity-normalization/default.nix
index e0beea29d83f..a6f9db795795 100644
--- a/pkgs/development/python-modules/intensity-normalization/default.nix
+++ b/pkgs/development/python-modules/intensity-normalization/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "intensity-normalization";
-  version = "2.2.4";
+  version = "3.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "intensity_normalization";
     inherit version;
-    hash = "sha256-s/trDIRoqLFj3NO+iv3E+AEB4grBAHDlEL6+TCdsgmg=";
+    hash = "sha256-d5f+Ug/ta9RQjk3JwHmVJQr8g93glzf7IcmLxLeA1tQ=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/ionoscloud/default.nix b/pkgs/development/python-modules/ionoscloud/default.nix
index 8c4d079a5b9e..d0ee3b283306 100644
--- a/pkgs/development/python-modules/ionoscloud/default.nix
+++ b/pkgs/development/python-modules/ionoscloud/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "ionoscloud";
-  version = "6.1.11";
+  version = "6.1.12";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-OQNdif263rY7c3tytKPMjXESmYsCBVtk0M25M3XDSJM=";
+    hash = "sha256-sc1qJjfLiI+KjLe3b+JE66giV1pIakYT7FsSjQjWA30=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/iplotx/default.nix b/pkgs/development/python-modules/iplotx/default.nix
index bb7623222c28..f01b9b0f0ef3 100644
--- a/pkgs/development/python-modules/iplotx/default.nix
+++ b/pkgs/development/python-modules/iplotx/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "iplotx";
-  version = "0.4.0";
+  version = "0.6.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "fabilab";
     repo = "iplotx";
     tag = version;
-    hash = "sha256-5piMXKr61F3euiCOlamZD7Iv6FQtrlbxwYYbZmD92Cg=";
+    hash = "sha256-RleGCDsH9VLX5hgU1l5pN6a1x9p52VA35CM5B9rJiy0=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/ipykernel/default.nix b/pkgs/development/python-modules/ipykernel/default.nix
index 2ccb4cd94ee3..8751238168fe 100644
--- a/pkgs/development/python-modules/ipykernel/default.nix
+++ b/pkgs/development/python-modules/ipykernel/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "ipykernel";
-  version = "6.29.5";
+  version = "6.30.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-8JOiLEpA+IKPjjMKnCl8uT3KsTvZZ43tbejlz4HFYhU=";
+    hash = "sha256-arsnAWGJZALna5E5T83OXRvl1F9FZnHlCAVy+FBb45s=";
   };
 
   # debugpy is optional, see https://github.com/ipython/ipykernel/pull/767
diff --git a/pkgs/development/python-modules/ipyniivue/default.nix b/pkgs/development/python-modules/ipyniivue/default.nix
index cdc0a1d2308d..6668878703a0 100644
--- a/pkgs/development/python-modules/ipyniivue/default.nix
+++ b/pkgs/development/python-modules/ipyniivue/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "ipyniivue";
-  version = "2.1.0";
+  version = "2.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "niivue";
     repo = "ipyniivue";
-    rev = "v${version}";
-    hash = "sha256-rgScBBJ0Jqr5REZ+YFJcKwWcV33RzJ/sn6RqTL/limo=";
+    tag = "v${version}";
+    hash = "sha256-APxxYflEYcjQGloLvdOGMlOnOL/0ttGVvTCLEMqp1W0=";
   };
 
   npmDeps = fetchNpmDeps {
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Show a nifti image in a webgl 2.0 canvas within a jupyter notebook cell";
     homepage = "https://github.com/niivue/ipyniivue";
-    changelog = "https://github.com/niivue/ipyniivue/releases/tag/${version}";
+    changelog = "https://github.com/niivue/ipyniivue/releases/tag/${src.tag}";
     license = licenses.bsd3;
     maintainers = with maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/ipython/default.nix b/pkgs/development/python-modules/ipython/default.nix
index 66680b336217..a2f8bac3b77a 100644
--- a/pkgs/development/python-modules/ipython/default.nix
+++ b/pkgs/development/python-modules/ipython/default.nix
@@ -36,12 +36,12 @@
 
 buildPythonPackage rec {
   pname = "ipython";
-  version = "9.3.0";
+  version = "9.4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-eeuJb58j9QrRbDvCBfaG9uAwrSRswwnGJ5okKxSv6dg=";
+    hash = "sha256-wDPG1OeRTD2XaKq+drvoe6HcZqkqBdtr+hEl2B8u4nA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/israel-rail-api/default.nix b/pkgs/development/python-modules/israel-rail-api/default.nix
index 885d284a4256..2a5c46e00199 100644
--- a/pkgs/development/python-modules/israel-rail-api/default.nix
+++ b/pkgs/development/python-modules/israel-rail-api/default.nix
@@ -32,7 +32,7 @@ buildPythonPackage rec {
   nativeCheckInputs = [ pytestCheckHook ];
 
   meta = {
-    changelog = "https://github.com/sh0oki/israel-rail-api/releases/tag/v${version}";
+    changelog = "https://github.com/sh0oki/israel-rail-api/releases/tag/${src.tag}";
     description = "Python wrapping of the Israeli Rail API";
     homepage = "https://github.com/sh0oki/israel-rail-api";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/itemadapter/default.nix b/pkgs/development/python-modules/itemadapter/default.nix
index 459c6b9a76fc..72c2d930334d 100644
--- a/pkgs/development/python-modules/itemadapter/default.nix
+++ b/pkgs/development/python-modules/itemadapter/default.nix
@@ -3,25 +3,23 @@
   attrs,
   buildPythonPackage,
   fetchPypi,
+  hatchling,
   pydantic,
   pythonOlder,
   scrapy,
-  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "itemadapter";
-  version = "0.11.0";
+  version = "0.12.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Ow8n9MXi6K5BXYPj1g0zrbe6CbmMMGOLxgb7Hf8uzdI=";
+    hash = "sha256-pQiCQ+iO/jCY8XIIVecHF25zVa2H0dIOKwMpf10V0b4=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [ hatchling ];
 
   optional-dependencies = {
     attrs = [ attrs ];
diff --git a/pkgs/development/python-modules/itemdb/default.nix b/pkgs/development/python-modules/itemdb/default.nix
index 20148a8b6d0c..5b92b75044b0 100644
--- a/pkgs/development/python-modules/itemdb/default.nix
+++ b/pkgs/development/python-modules/itemdb/default.nix
@@ -6,7 +6,7 @@
 
 buildPythonPackage rec {
   pname = "itemdb";
-  version = "1.2.0";
+  version = "1.3.0";
   format = "setuptools";
 
   # PyPI tarball doesn't include tests directory
@@ -14,7 +14,7 @@ buildPythonPackage rec {
     owner = "almarklein";
     repo = "itemdb";
     tag = "v${version}";
-    sha256 = "sha256-egxQ1tGC6R5p1stYm4r05+b2HkuT+nBySTZPGqeAbSE=";
+    sha256 = "sha256-HXdOERq2td6CME8zWN0DRVkSlmdqTg2po7aJrOuITHE=";
   };
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/iterm2/default.nix b/pkgs/development/python-modules/iterm2/default.nix
index 22ddacfb0cba..6e92003720ef 100644
--- a/pkgs/development/python-modules/iterm2/default.nix
+++ b/pkgs/development/python-modules/iterm2/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "iterm2";
-  version = "2.9";
+  version = "2.10";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-FoR17UloBtFg3pRurquHCzGaySehUPhVtmQmNkhWTz4=";
+    hash = "sha256-jAz5X/yp8b90CYg2GN7uZqzXPGOSkiLiNDV4DcxRaGk=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/jaraco-abode/default.nix b/pkgs/development/python-modules/jaraco-abode/default.nix
index e5c4147dd0ac..fe1f78a4c250 100644
--- a/pkgs/development/python-modules/jaraco-abode/default.nix
+++ b/pkgs/development/python-modules/jaraco-abode/default.nix
@@ -25,16 +25,20 @@
 
 buildPythonPackage rec {
   pname = "jaraco-abode";
-  version = "6.3.0";
+  version = "6.4.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jaraco";
     repo = "jaraco.abode";
     tag = "v${version}";
-    hash = "sha256-AqnyQdLkg2vobVJ84X15AB0Yyj3gZf4rP3pEdk3MqZ4=";
+    hash = "sha256-nnnVtNXQ7Sa4wXl0ay3OyjvOq2j90pTwhK24WR8mrBo=";
   };
 
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
   build-system = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/jaraco-collections/default.nix b/pkgs/development/python-modules/jaraco-collections/default.nix
index 128592ba047d..8f913f2d11a3 100644
--- a/pkgs/development/python-modules/jaraco-collections/default.nix
+++ b/pkgs/development/python-modules/jaraco-collections/default.nix
@@ -10,18 +10,17 @@
 
 buildPythonPackage rec {
   pname = "jaraco-collections";
-  version = "5.1.0";
+  version = "5.2.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "jaraco_collections";
     inherit version;
-    hash = "sha256-DkgpQJ05rRikCqZ1T+4nZ/TZcwxLpm3J34nx0nVplMI=";
+    hash = "sha256-2rgZcLrW8KtTsgdF8bAdo3km5MD81CUEaqReDY76GO0=";
   };
 
   postPatch = ''
-    # break dependency cycle
-    sed -i "/'jaraco.text',/d" setup.cfg
+    sed -i "/coherent\.licensed/d" pyproject.toml
   '';
 
   build-system = [
diff --git a/pkgs/development/python-modules/jaraco-functools/default.nix b/pkgs/development/python-modules/jaraco-functools/default.nix
index 20f50cb6a789..90b983a1c504 100644
--- a/pkgs/development/python-modules/jaraco-functools/default.nix
+++ b/pkgs/development/python-modules/jaraco-functools/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "jaraco-functools";
-  version = "4.1.0";
+  version = "4.2.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,9 +21,13 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "jaraco_functools";
     inherit version;
-    hash = "sha256-cPfg4q4HZJjiElYjJegFIE/Akte0wX4OhslZ4klwGp0=";
+    hash = "sha256-vmNKv8yrzlb6MFP4x+vje2gmg6Tud5NnDO0XurAIc1M=";
   };
 
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
   build-system = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/jaraco-itertools/default.nix b/pkgs/development/python-modules/jaraco-itertools/default.nix
index 07c1cd338518..971dbd9aba1c 100644
--- a/pkgs/development/python-modules/jaraco-itertools/default.nix
+++ b/pkgs/development/python-modules/jaraco-itertools/default.nix
@@ -1,41 +1,40 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   setuptools-scm,
   inflect,
   more-itertools,
-  six,
-  pytest,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "jaraco-itertools";
-  version = "6.4.1";
-  format = "pyproject";
+  version = "6.4.3";
+  pyproject = true;
 
-  src = fetchPypi {
-    pname = "jaraco.itertools";
-    inherit version;
-    hash = "sha256-MU/OVi67RepIIqmLvXsi5f6sfVEY28Gk8ess0Ea/+kc=";
+  src = fetchFromGitHub {
+    owner = "jaraco";
+    repo = "jaraco.itertools";
+    tag = "v${version}";
+    hash = "sha256-LjWkyY9I8BBYpFm8TT3kq4vk63pNQrnZ15haJCQ5xlk=";
   };
 
   pythonNamespaces = [ "jaraco" ];
 
-  nativeBuildInputs = [ setuptools-scm ];
+  build-system = [ setuptools-scm ];
 
-  propagatedBuildInputs = [
+  postPatch = ''
+    # downloads license texts at build time
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
+  dependencies = [
     inflect
     more-itertools
-    six
   ];
-  nativeCheckInputs = [ pytest ];
 
-  # tests no longer available through pypi
-  doCheck = false;
-  checkPhase = ''
-    pytest
-  '';
+  nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "jaraco.itertools" ];
 
diff --git a/pkgs/development/python-modules/jaraco-logging/default.nix b/pkgs/development/python-modules/jaraco-logging/default.nix
index 3368ac4ae19e..44e8ad050bcf 100644
--- a/pkgs/development/python-modules/jaraco-logging/default.nix
+++ b/pkgs/development/python-modules/jaraco-logging/default.nix
@@ -10,17 +10,21 @@
 
 buildPythonPackage rec {
   pname = "jaraco-logging";
-  version = "3.3.0";
+  version = "3.4.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
-    pname = "jaraco.logging";
+    pname = "jaraco_logging";
     inherit version;
-    hash = "sha256-9KfPusuGqDTCiGwBo7UrxM3icowdlxfEnU3OHWJI8Hs=";
+    hash = "sha256-59bcg2hHfOaesdbthR2AWJahypQs4/0Xc1gDEbC3dfs=";
   };
 
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
   pythonNamespaces = [ "jaraco" ];
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/jiwer/default.nix b/pkgs/development/python-modules/jiwer/default.nix
index 5f0ab0b1b73d..86891d10edcb 100644
--- a/pkgs/development/python-modules/jiwer/default.nix
+++ b/pkgs/development/python-modules/jiwer/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "jiwer";
-  version = "3.04";
+  version = "4.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "jitsi";
     repo = "jiwer";
     tag = "v${version}";
-    hash = "sha256-2LzAOgABK00Pz3v5WWYUAcZOYcTbRKfgw7U5DOohB/Q=";
+    hash = "sha256-iyFcxZGYMeQXSZBHJg7kBWyOciZyEV7gSzSy4SvBGzw=";
   };
 
   build-system = [
@@ -39,7 +39,7 @@ buildPythonPackage rec {
     description = "Simple and fast python package to evaluate an automatic speech recognition system";
     mainProgram = "jiwer";
     homepage = "https://github.com/jitsi/jiwer";
-    changelog = "https://github.com/jitsi/jiwer/releases/tag/v${version}";
+    changelog = "https://github.com/jitsi/jiwer/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/joblib/default.nix b/pkgs/development/python-modules/joblib/default.nix
index ac35a717420d..4959b53e2283 100644
--- a/pkgs/development/python-modules/joblib/default.nix
+++ b/pkgs/development/python-modules/joblib/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "joblib";
-  version = "1.5.0";
+  version = "1.5.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2HV/lVOJo916IxUuQ7wpfC4MLTBgBW2tD+78iKBpObU=";
+    hash = "sha256-9PhuNR85/j0NMqnyw9ivHuTOwoWq/LJwA92lIFV2tEQ=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/josepy/default.nix b/pkgs/development/python-modules/josepy/default.nix
index 7358a9375e00..15f1282b8bf0 100644
--- a/pkgs/development/python-modules/josepy/default.nix
+++ b/pkgs/development/python-modules/josepy/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "josepy";
-  version = "2.0.0";
+  version = "2.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "certbot";
     repo = "josepy";
     tag = "v${version}";
-    hash = "sha256-9hY3A+XSoVrRLds4tNV+5HWkmMwcS9UtehrKoj0OIEw=";
+    hash = "sha256-gXXsipvlxLs/dc0rjnaKlR4lySDfDfpo0tcSVrOz9P4=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/joserfc/default.nix b/pkgs/development/python-modules/joserfc/default.nix
index 9823612e5371..5cbe913821b5 100644
--- a/pkgs/development/python-modules/joserfc/default.nix
+++ b/pkgs/development/python-modules/joserfc/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "joserfc";
-  version = "1.1.0";
+  version = "1.2.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "authlib";
     repo = "joserfc";
     tag = version;
-    hash = "sha256-95xtUzzIxxvDtpHX/5uCHnTQTB8Fc08DZGUOR/SdKLs=";
+    hash = "sha256-GS1UvhOdeuyGaF/jS0zgdYkRxz6M8w4lFXcbtIPqQcY=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/jsonfield/default.nix b/pkgs/development/python-modules/jsonfield/default.nix
index bf7e67eb6207..b6139135a560 100644
--- a/pkgs/development/python-modules/jsonfield/default.nix
+++ b/pkgs/development/python-modules/jsonfield/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "jsonfield";
-  version = "3.1.0";
+  version = "3.2.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0yl828cd0m8jsyr4di6hcjdqmi31ijh5vk57mbpfl7p2gmcq8kky";
+    sha256 = "sha256-ylOHG8MwiuT0zdw7T5ntXG/Gq7GDL7+0mbxtpWbHDko=";
   };
 
   nativeCheckInputs = [
diff --git a/pkgs/development/python-modules/jsonpickle/default.nix b/pkgs/development/python-modules/jsonpickle/default.nix
index d8da4abe884d..c67eb0b78f00 100644
--- a/pkgs/development/python-modules/jsonpickle/default.nix
+++ b/pkgs/development/python-modules/jsonpickle/default.nix
@@ -15,12 +15,12 @@
 
 buildPythonPackage rec {
   pname = "jsonpickle";
-  version = "4.0.5";
+  version = "4.1.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-8pmBizk2fDYbPya9uoJ9QkmrXTg82TFE0PlLVBeqyzU=";
+    hash = "sha256-+G4Y8T4rlsHB7t4Le5AJW7th2Z/twUgTxE3C82HbuuE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/jsonrpc-websocket/default.nix b/pkgs/development/python-modules/jsonrpc-websocket/default.nix
index 8047a7a7ebec..8fd8391120a6 100644
--- a/pkgs/development/python-modules/jsonrpc-websocket/default.nix
+++ b/pkgs/development/python-modules/jsonrpc-websocket/default.nix
@@ -5,7 +5,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   jsonrpc-base,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pythonOlder,
   setuptools,
@@ -34,7 +34,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/jsonschema/default.nix b/pkgs/development/python-modules/jsonschema/default.nix
index 0407a46ba198..9eb7cdf30e5c 100644
--- a/pkgs/development/python-modules/jsonschema/default.nix
+++ b/pkgs/development/python-modules/jsonschema/default.nix
@@ -6,12 +6,10 @@
   hatch-fancy-pypi-readme,
   hatch-vcs,
   hatchling,
-  importlib-resources,
+  jsonpath-ng,
   jsonschema-specifications,
-  pkgutil-resolve-name,
   pip,
   pytestCheckHook,
-  pythonOlder,
   referencing,
   rpds-py,
 
@@ -23,20 +21,19 @@
   rfc3339-validator,
   rfc3986-validator,
   rfc3987,
+  rfc3987-syntax,
   uri-template,
   webcolors,
 }:
 
 buildPythonPackage rec {
   pname = "jsonschema";
-  version = "4.23.0";
+  version = "4.25.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-1xSX/vJjUaMyZTN/p3/+uCQj8+ohKDzZRnuwOZkma8Q=";
+    hash = "sha256-5jrPXBF2LA5mcv+2FIK99X8IdmhNjSScD+LXMNSLxV8=";
   };
 
   postPatch = ''
@@ -51,13 +48,10 @@ buildPythonPackage rec {
 
   dependencies = [
     attrs
+    jsonpath-ng
     jsonschema-specifications
     referencing
     rpds-py
-  ]
-  ++ lib.optionals (pythonOlder "3.9") [
-    importlib-resources
-    pkgutil-resolve-name
   ];
 
   optional-dependencies = {
@@ -78,6 +72,7 @@ buildPythonPackage rec {
       jsonpointer
       rfc3339-validator
       rfc3986-validator
+      rfc3987-syntax
       uri-template
       webcolors
     ];
diff --git a/pkgs/development/python-modules/jug/default.nix b/pkgs/development/python-modules/jug/default.nix
index ed62d6306221..311ace4bcdc8 100644
--- a/pkgs/development/python-modules/jug/default.nix
+++ b/pkgs/development/python-modules/jug/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "jug";
-  version = "2.3.1";
+  version = "2.4.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Jug";
     inherit version;
-    hash = "sha256-Y2TWqJi7GjmWUFpe1b150NgwRw9VKhCk5EoN5NDcPXU=";
+    hash = "sha256-B6We+9bW0dfT5DUsxU212e7ueyRc8GgBVPVnIek8ckU=";
   };
 
   propagatedBuildInputs = [ bottle ];
diff --git a/pkgs/development/python-modules/jupyter-lsp/default.nix b/pkgs/development/python-modules/jupyter-lsp/default.nix
index 54ce115af8df..d2c97fb65985 100644
--- a/pkgs/development/python-modules/jupyter-lsp/default.nix
+++ b/pkgs/development/python-modules/jupyter-lsp/default.nix
@@ -8,12 +8,13 @@
 
 buildPythonPackage rec {
   pname = "jupyter-lsp";
-  version = "2.2.5";
+  version = "2.2.6";
   pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-eTFHoFrURvgJ/VPvHNGan1JW/Qota3zpQ6mCy09UUAE=";
+    pname = "jupyter_lsp";
+    inherit version;
+    hash = "sha256-BWa9m7BP2eZ3SpN+0BUitVW6eL43vr73h8irIt5MA2E=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/jupyter-repo2docker/default.nix b/pkgs/development/python-modules/jupyter-repo2docker/default.nix
index e88befd0acd1..bcf31bfb43af 100644
--- a/pkgs/development/python-modules/jupyter-repo2docker/default.nix
+++ b/pkgs/development/python-modules/jupyter-repo2docker/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "jupyter-repo2docker";
-  version = "2024.07.0";
+  version = "2025.08.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "jupyterhub";
     repo = "repo2docker";
     tag = version;
-    hash = "sha256-ZzZBuJBPDG4to1fSYn2xysupXbPS9Q6wqWr3Iq/Vds8=";
+    hash = "sha256-vqLZbqshEl3xC5hcE4OkWfZpPSlSfv70oygEYPFqyFE=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -64,7 +64,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Turn code repositories into Jupyter enabled Docker Images";
     homepage = "https://repo2docker.readthedocs.io/";
-    changelog = "https://github.com/jupyterhub/repo2docker/blob/${src.rev}/docs/source/changelog.md";
+    changelog = "https://github.com/jupyterhub/repo2docker/blob/${src.tag}/docs/source/changelog.md";
     license = licenses.bsd3;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/jupyterlab/default.nix b/pkgs/development/python-modules/jupyterlab/default.nix
index 1be0da1b95ea..5a95b9481025 100644
--- a/pkgs/development/python-modules/jupyterlab/default.nix
+++ b/pkgs/development/python-modules/jupyterlab/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "jupyterlab";
-  version = "4.4.3";
+  version = "4.4.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jupyterlab";
     repo = "jupyterlab";
     tag = "v${version}";
-    hash = "sha256-ZenPoUnUlNLiOVI6tkF/Lq6l3tMA8WXKg9ENwOgS720=";
+    hash = "sha256-Joc8gtUJS8J2SLJqBV3f4bzmOje1grdgIMUkcwl9K44=";
   };
 
   nativeBuildInputs = [
@@ -48,7 +48,7 @@ buildPythonPackage rec {
   offlineCache = yarn-berry_3.fetchYarnBerryDeps {
     inherit src;
     sourceRoot = "${src.name}/jupyterlab/staging";
-    hash = "sha256-qW0SiISQhwVPk0wwnEtxB4fJMyVS3wzp/4pS8bPleM4=";
+    hash = "sha256-EwR1gVrEy7QV8DnJBPx1AlbWY10FFngpLXdAIKn1HI0=";
   };
 
   preBuild = ''
diff --git a/pkgs/development/python-modules/kajiki/default.nix b/pkgs/development/python-modules/kajiki/default.nix
index 1632d83f1af9..e801f49aca4a 100644
--- a/pkgs/development/python-modules/kajiki/default.nix
+++ b/pkgs/development/python-modules/kajiki/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "kajiki";
-  version = "0.9.2";
+  version = "1.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "jackrosenthal";
     repo = "kajiki";
     tag = "v${version}";
-    hash = "sha256-EbXe4Jh2IKAYw9GE0kFgKVv9c9uAOiFFYaMF8CGaOfg=";
+    hash = "sha256-5qsRxKeWCndi2r1HaIX/bm92oOWU4J4eM9aud6ai8ZQ=";
   };
 
   propagatedBuildInputs = [ linetable ];
@@ -35,7 +35,7 @@ buildPythonPackage rec {
     description = "Module provides fast well-formed XML templates";
     mainProgram = "kajiki";
     homepage = "https://github.com/nandoflorestan/kajiki";
-    changelog = "https://github.com/jackrosenthal/kajiki/releases/tag/v${version}";
+    changelog = "https://github.com/jackrosenthal/kajiki/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ onny ];
   };
diff --git a/pkgs/development/python-modules/karton-core/default.nix b/pkgs/development/python-modules/karton-core/default.nix
index 57b51af427f6..dd9293b0f273 100644
--- a/pkgs/development/python-modules/karton-core/default.nix
+++ b/pkgs/development/python-modules/karton-core/default.nix
@@ -26,7 +26,10 @@ buildPythonPackage rec {
 
   build-system = [ setuptools ];
 
-  pythonRelaxDeps = [ "boto3" ];
+  pythonRelaxDeps = [
+    "aioboto3"
+    "boto3"
+  ];
 
   dependencies = [
     aioboto3
diff --git a/pkgs/development/python-modules/kernels/default.nix b/pkgs/development/python-modules/kernels/default.nix
index 4f97afd113e0..47e087b90b3f 100644
--- a/pkgs/development/python-modules/kernels/default.nix
+++ b/pkgs/development/python-modules/kernels/default.nix
@@ -7,14 +7,14 @@
 }:
 buildPythonPackage rec {
   pname = "kernels";
-  version = "0.7.0";
+  version = "0.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = "kernels";
     tag = "v${version}";
-    hash = "sha256-IbOadtnuRgN54Sg+mFULkkqi6LVlW+ohBgtemz/Pxxc=";
+    hash = "sha256-lREccuvahjNV44reYNF8fkJ2o4fMZRB9Ddr9r4HmT2k=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/kestra/default.nix b/pkgs/development/python-modules/kestra/default.nix
index 31653a931a3c..c6039c8a121c 100644
--- a/pkgs/development/python-modules/kestra/default.nix
+++ b/pkgs/development/python-modules/kestra/default.nix
@@ -9,14 +9,14 @@
 }:
 buildPythonPackage rec {
   pname = "kestra";
-  version = "0.21.0";
+  version = "0.23.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "kestra-io";
     repo = "libs";
     tag = "v${version}";
-    hash = "sha256-WaAw/PKoHPjbNrpCV6CuqUIb2Ysv4rHYFJbgGyU6li0=";
+    hash = "sha256-WtwvOSgAcN+ly0CnkL0Y7lrO4UhSSiXmoAyGXP/hFtE=";
   };
 
   sourceRoot = "${src.name}/python";
diff --git a/pkgs/development/python-modules/kfactory/default.nix b/pkgs/development/python-modules/kfactory/default.nix
index 2f661515e329..a164a03d5ccb 100644
--- a/pkgs/development/python-modules/kfactory/default.nix
+++ b/pkgs/development/python-modules/kfactory/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "kfactory";
-  version = "1.4.4";
+  version = "1.12.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "gdsfactory";
     repo = "kfactory";
     tag = "v${version}";
-    hash = "sha256-/dhlAcrqQP/YeKGhnBAVMEy80X3yShn65ywoZMRU/ZM=";
+    hash = "sha256-C7ner1jkMCHI8/sRiw82l+THhAIWhwJuZ/ctJ9V76Us=";
   };
 
   build-system = [
@@ -77,7 +77,7 @@ buildPythonPackage rec {
   meta = {
     description = "KLayout API implementation of gdsfactory";
     homepage = "https://github.com/gdsfactory/kfactory";
-    changelog = "https://github.com/gdsfactory/kfactory/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/gdsfactory/kfactory/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ fbeffa ];
   };
diff --git a/pkgs/development/python-modules/kiss-headers/default.nix b/pkgs/development/python-modules/kiss-headers/default.nix
index 3bc40680fb7e..79011b9660bf 100644
--- a/pkgs/development/python-modules/kiss-headers/default.nix
+++ b/pkgs/development/python-modules/kiss-headers/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "kiss-headers";
-  version = "2.4.3";
+  version = "2.5.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Ousret";
     repo = "kiss-headers";
     tag = version;
-    hash = "sha256-WeAzlC1yT+0nPSuB278z8T0XvPjbre051f/Rva5ujAk=";
+    hash = "sha256-h0e7kFbn6qxIeSG85qetBg6IeSi/2YAaZLGS0+JH2g8=";
   };
 
   nativeBuildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/kornia/default.nix b/pkgs/development/python-modules/kornia/default.nix
index 943bcf4931ac..0ea0b2eaf1b7 100644
--- a/pkgs/development/python-modules/kornia/default.nix
+++ b/pkgs/development/python-modules/kornia/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "kornia";
-  version = "0.8.0";
+  version = "0.8.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "kornia";
     repo = "kornia";
     tag = "v${version}";
-    hash = "sha256-pMCGL33DTnMLlxRbhBhRuR/ZA575+kbUJ59N3nuqpdI=";
+    hash = "sha256-LT+F/tskySvSmaBufIaQhI4+wK5DZBNanQbnYj4ywGo=";
   };
 
   build-system = [ setuptools ];
@@ -52,7 +52,7 @@ buildPythonPackage rec {
 
   meta = {
     homepage = "https://kornia.readthedocs.io";
-    changelog = "https://github.com/kornia/kornia/releases/tag/v${version}";
+    changelog = "https://github.com/kornia/kornia/releases/tag/${src.tag}";
     description = "Differentiable computer vision library";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ bcdarwin ];
diff --git a/pkgs/development/python-modules/kubernetes/default.nix b/pkgs/development/python-modules/kubernetes/default.nix
index de99487b2503..7861d5e2ff1b 100644
--- a/pkgs/development/python-modules/kubernetes/default.nix
+++ b/pkgs/development/python-modules/kubernetes/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "kubernetes";
-  version = "32.0.1";
+  version = "33.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "kubernetes-client";
     repo = "python";
     tag = "v${version}";
-    hash = "sha256-pQuo2oLWMmq4dHTqJYL+Z1xg3ZoYp9ZzLDT7jWIsglo=";
+    hash = "sha256-+jL0XS7Y8qOqzZ5DcG/hZFUpj7krJAaA4fgPNSEgIAE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/labelbox/default.nix b/pkgs/development/python-modules/labelbox/default.nix
index 50ba167f6f47..2c9d723afd2c 100644
--- a/pkgs/development/python-modules/labelbox/default.nix
+++ b/pkgs/development/python-modules/labelbox/default.nix
@@ -29,14 +29,14 @@
 }:
 
 let
-  version = "6.10.0";
+  version = "7.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Labelbox";
     repo = "labelbox-python";
-    tag = "v.${version}";
-    hash = "sha256-EstHsY9yFeUhQAx3pgvKk/o3EMkr3JeHDDg/p6meDIE=";
+    tag = "v${version}";
+    hash = "sha256-zlcyvouvemHhbD1UcYbbbkmCkTVwarSTF9mCi0I/ZzY=";
   };
 
   lbox-clients = buildPythonPackage {
diff --git a/pkgs/development/python-modules/labgrid/default.nix b/pkgs/development/python-modules/labgrid/default.nix
index f0e6b5b61a9e..a73a98615485 100644
--- a/pkgs/development/python-modules/labgrid/default.nix
+++ b/pkgs/development/python-modules/labgrid/default.nix
@@ -29,14 +29,14 @@
 
 buildPythonPackage rec {
   pname = "labgrid";
-  version = "25.0";
+  version = "25.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "labgrid-project";
     repo = "labgrid";
     tag = "v${version}";
-    hash = "sha256-Czq8Wx8ThKLcR8GjdlRND+Y1nY1PTl6wDkz9ml83DBk=";
+    hash = "sha256-cLofkkp2T6Y9nQ5LIS7w9URZlt8DQNN8dm3NnrvcKWY=";
   };
 
   # Remove after package bump
diff --git a/pkgs/development/python-modules/lacuscore/default.nix b/pkgs/development/python-modules/lacuscore/default.nix
index 573090fad011..3d29e1bdfe01 100644
--- a/pkgs/development/python-modules/lacuscore/default.nix
+++ b/pkgs/development/python-modules/lacuscore/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "lacuscore";
-  version = "1.14.0";
+  version = "1.16.6";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "ail-project";
     repo = "LacusCore";
     tag = "v${version}";
-    hash = "sha256-szcvg4jfJ84kHYWjPBwecfvfsc258SS0OIuYle1lC1g=";
+    hash = "sha256-LcqGJU+wMKTF1E4asysQPcfURqmgc4WQompPpHEgjb8=";
   };
 
   pythonRelaxDeps = [
@@ -60,7 +60,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Modulable part of Lacus";
     homepage = "https://github.com/ail-project/LacusCore";
-    changelog = "https://github.com/ail-project/LacusCore/releases/tag/v${version}";
+    changelog = "https://github.com/ail-project/LacusCore/releases/tag/${src.tag}";
     license = licenses.bsd3;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/langchain-anthropic/default.nix b/pkgs/development/python-modules/langchain-anthropic/default.nix
index 56bffb3d8dcb..5de2eacc5a5f 100644
--- a/pkgs/development/python-modules/langchain-anthropic/default.nix
+++ b/pkgs/development/python-modules/langchain-anthropic/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-anthropic";
-  version = "0.3.17";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-anthropic==${version}";
-    hash = "sha256-oUT4Mu/vG+bVF6zLQX2RbVUglJ6VMyBt8XtCBSlBlpU=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/anthropic";
diff --git a/pkgs/development/python-modules/langchain-azure-dynamic-sessions/default.nix b/pkgs/development/python-modules/langchain-azure-dynamic-sessions/default.nix
index a278a133bba1..f404c0562d97 100644
--- a/pkgs/development/python-modules/langchain-azure-dynamic-sessions/default.nix
+++ b/pkgs/development/python-modules/langchain-azure-dynamic-sessions/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-azure-dynamic-sessions";
-  version = "0.2.0";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-azure-dynamic-sessions==${version}";
-    hash = "sha256-ACR+JzKcnYXROGOQe6DlZeqcYd40KlesgXSUOybOT20=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/azure-dynamic-sessions";
diff --git a/pkgs/development/python-modules/langchain-chroma/default.nix b/pkgs/development/python-modules/langchain-chroma/default.nix
index 7b0c8ed4ca24..9c670e44b09e 100644
--- a/pkgs/development/python-modules/langchain-chroma/default.nix
+++ b/pkgs/development/python-modules/langchain-chroma/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-chroma";
-  version = "0.2.4";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-chroma==${version}";
-    hash = "sha256-w4xvPPLYkPiQA34bimVHLe+vghMI9Pq36CHoE/EMnr8=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/chroma";
diff --git a/pkgs/development/python-modules/langchain-deepseek/default.nix b/pkgs/development/python-modules/langchain-deepseek/default.nix
index 9830a391d323..f26769315352 100644
--- a/pkgs/development/python-modules/langchain-deepseek/default.nix
+++ b/pkgs/development/python-modules/langchain-deepseek/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-deepseek";
-  version = "0.1.4";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-deepseek==${version}";
-    hash = "sha256-lIlThVpyZF5osiCyYMO8kQUNtG5eUjXGZLdgRraj4Yc=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/deepseek";
diff --git a/pkgs/development/python-modules/langchain-fireworks/default.nix b/pkgs/development/python-modules/langchain-fireworks/default.nix
index 460c842ebebd..48a221a7766c 100644
--- a/pkgs/development/python-modules/langchain-fireworks/default.nix
+++ b/pkgs/development/python-modules/langchain-fireworks/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-fireworks";
-  version = "0.3.0";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-fireworks==${version}";
-    hash = "sha256-OZou323FAk2I4YuQV7sllbzDwFQWy/90FK3gIHnEBd0=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/fireworks";
diff --git a/pkgs/development/python-modules/langchain-google-genai/default.nix b/pkgs/development/python-modules/langchain-google-genai/default.nix
index c1b2989e55e5..9ebf4abbc76d 100644
--- a/pkgs/development/python-modules/langchain-google-genai/default.nix
+++ b/pkgs/development/python-modules/langchain-google-genai/default.nix
@@ -29,14 +29,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-google-genai";
-  version = "2.1.8";
+  version = "2.1.9";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain-google";
     tag = "libs/genai/v${version}";
-    hash = "sha256-ObeQuxBEiJhR2AgkFeIZ1oe2GxhhQywRA8eCALOwkT8=";
+    hash = "sha256-9jXiX4WDx5YY39MytuzAWGuDzLkGmtq95ShAIW3zH0U=";
   };
 
   sourceRoot = "${src.name}/libs/genai";
diff --git a/pkgs/development/python-modules/langchain-groq/default.nix b/pkgs/development/python-modules/langchain-groq/default.nix
index 58d01224f502..0acb97a7dc43 100644
--- a/pkgs/development/python-modules/langchain-groq/default.nix
+++ b/pkgs/development/python-modules/langchain-groq/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-groq";
-  version = "0.3.6";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-groq==${version}";
-    hash = "sha256-f0s8fBT1+uZbatWSPehKfrGYGotBFeNixCiGaAc753o=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/groq";
diff --git a/pkgs/development/python-modules/langchain-huggingface/default.nix b/pkgs/development/python-modules/langchain-huggingface/default.nix
index 0d267785c342..e95295bff6c2 100644
--- a/pkgs/development/python-modules/langchain-huggingface/default.nix
+++ b/pkgs/development/python-modules/langchain-huggingface/default.nix
@@ -33,14 +33,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-huggingface";
-  version = "0.3.0";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-huggingface==${version}";
-    hash = "sha256-+7fxCw4YYyfXwXw30lf1Xb01aj01C6X0B5yUrNPQzNY=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/huggingface";
diff --git a/pkgs/development/python-modules/langchain-mistralai/default.nix b/pkgs/development/python-modules/langchain-mistralai/default.nix
index 69ca22771391..e7e45057e77c 100644
--- a/pkgs/development/python-modules/langchain-mistralai/default.nix
+++ b/pkgs/development/python-modules/langchain-mistralai/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-mistralai";
-  version = "0.2.11";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-mistralai==${version}";
-    hash = "sha256-14mYvW7j2hxAFZanRhuuo1seX6E4+tAuEPExDbdwHKg=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/mistralai";
diff --git a/pkgs/development/python-modules/langchain-mongodb/default.nix b/pkgs/development/python-modules/langchain-mongodb/default.nix
index 978bfffbc6ed..212efde0e232 100644
--- a/pkgs/development/python-modules/langchain-mongodb/default.nix
+++ b/pkgs/development/python-modules/langchain-mongodb/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-mongodb";
-  version = "0.2.0";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-mongodb==${version}";
-    hash = "sha256-Jd9toXkS9dGtSIrJQ/5W+swV1z2BJOJKBtkyGzj3oSc=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/mongodb";
diff --git a/pkgs/development/python-modules/langchain-ollama/default.nix b/pkgs/development/python-modules/langchain-ollama/default.nix
index 75a6c8f8e55d..d76f1cef40c4 100644
--- a/pkgs/development/python-modules/langchain-ollama/default.nix
+++ b/pkgs/development/python-modules/langchain-ollama/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-ollama";
-  version = "0.3.6";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-ollama==${version}";
-    hash = "sha256-GQkyJaYvwRbjDR0Rfen7/X5hFhY2+WU74B6/9Ufhpo4=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/ollama";
diff --git a/pkgs/development/python-modules/langchain-openai/default.nix b/pkgs/development/python-modules/langchain-openai/default.nix
index fa62fad8522c..142098443e91 100644
--- a/pkgs/development/python-modules/langchain-openai/default.nix
+++ b/pkgs/development/python-modules/langchain-openai/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-openai";
-  version = "0.3.28";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-openai==${version}";
-    hash = "sha256-HpAdCHxmfGJcqXArvtlYagNuEBGBjrbICIwh9nI0qMQ=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/openai";
diff --git a/pkgs/development/python-modules/langchain-perplexity/default.nix b/pkgs/development/python-modules/langchain-perplexity/default.nix
index 0afbb0d521a4..79f6078643a5 100644
--- a/pkgs/development/python-modules/langchain-perplexity/default.nix
+++ b/pkgs/development/python-modules/langchain-perplexity/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-perplexity";
-  version = "0.1.2";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-perplexity==${version}";
-    hash = "sha256-4KYLyhGbG8Y8cDGffE4/8OM61eAKRFTgxKDKMTQExic=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/perplexity";
diff --git a/pkgs/development/python-modules/langchain-tests/default.nix b/pkgs/development/python-modules/langchain-tests/default.nix
index 495d77229666..42afbb15a0cc 100644
--- a/pkgs/development/python-modules/langchain-tests/default.nix
+++ b/pkgs/development/python-modules/langchain-tests/default.nix
@@ -20,7 +20,7 @@
 
   # tests
   numpy,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-socket,
   pytestCheckHook,
 
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-tests";
-  version = "0.3.20";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-tests==${version}";
-    hash = "sha256-RMuxWA/n8d71FReFKO3Y/5P0MYk4aZ5WU2/TRxf9UuE=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/standard-tests";
@@ -54,7 +54,7 @@ buildPythonPackage rec {
   dependencies = [
     httpx
     langchain-core
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-benchmark
     pytest-codspeed
     pytest-recording
diff --git a/pkgs/development/python-modules/langchain-text-splitters/default.nix b/pkgs/development/python-modules/langchain-text-splitters/default.nix
index 73398f9cf85b..53ddcc2ae78c 100644
--- a/pkgs/development/python-modules/langchain-text-splitters/default.nix
+++ b/pkgs/development/python-modules/langchain-text-splitters/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-text-splitters";
-  version = "0.3.9";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-text-splitters==${version}";
-    hash = "sha256-dMGvGZyux38Svl0OYgiAoYLdAf0lv27lzXgHFTBp3cs=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/text-splitters";
diff --git a/pkgs/development/python-modules/langchain-xai/default.nix b/pkgs/development/python-modules/langchain-xai/default.nix
index 655813d52e14..9d61f9437079 100644
--- a/pkgs/development/python-modules/langchain-xai/default.nix
+++ b/pkgs/development/python-modules/langchain-xai/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "langchain-xai";
-  version = "0.2.5";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain-xai==${version}";
-    hash = "sha256-nae7KwCKjkvenOO8vErxFQStHolc+N8EUuK6U8r48Kc=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/partners/xai";
diff --git a/pkgs/development/python-modules/langchain/default.nix b/pkgs/development/python-modules/langchain/default.nix
index 39b81c33af58..96754ea94d52 100644
--- a/pkgs/development/python-modules/langchain/default.nix
+++ b/pkgs/development/python-modules/langchain/default.nix
@@ -44,14 +44,14 @@
 
 buildPythonPackage rec {
   pname = "langchain";
-  version = "0.3.27";
+  version = "0.3.72";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langchain";
-    tag = "langchain==${version}";
-    hash = "sha256-bqzJ0017Td65rhDCr2wfx+SCaJzPZTFzQpzy3RlaRj4=";
+    tag = "langchain-core==${version}";
+    hash = "sha256-Q2uGMiODUtwkPdOyuSqp8vqjlLjiXk75QjXp7rr20tc=";
   };
 
   sourceRoot = "${src.name}/libs/langchain";
diff --git a/pkgs/development/python-modules/langfuse/default.nix b/pkgs/development/python-modules/langfuse/default.nix
index 11447656a919..d0331f9b16f6 100644
--- a/pkgs/development/python-modules/langfuse/default.nix
+++ b/pkgs/development/python-modules/langfuse/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "langfuse";
-  version = "2.60.7";
+  version = "3.2.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langfuse";
     repo = "langfuse-python";
     tag = "v${version}";
-    hash = "sha256-8IlqHO46Kzz+ifmIu2y5SxshNv/lpZO74b1KTE2Opk4=";
+    hash = "sha256-O2mu152aQnYZkPgJTf9TGrC4Ohcp89qQxxrup63yxu8=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/langgraph-checkpoint-postgres/default.nix b/pkgs/development/python-modules/langgraph-checkpoint-postgres/default.nix
index 590d0ecefcdb..c1ea48e77f52 100644
--- a/pkgs/development/python-modules/langgraph-checkpoint-postgres/default.nix
+++ b/pkgs/development/python-modules/langgraph-checkpoint-postgres/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "langgraph-checkpoint-postgres";
-  version = "2.0.23";
+  version = "2.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langgraph";
-    tag = "checkpointpostgres==${version}";
-    hash = "sha256-QAzT8T3bf3R3gwI/iWDYYDz0SxgLZsP61oMk72dYz4s=";
+    tag = "checkpoint==${version}";
+    hash = "sha256-UY3AChShKfOrtOQzOm5vi3Yy3rlBc+TAje9L2L6My/U=";
   };
 
   postgresqlTestSetupPost = ''
diff --git a/pkgs/development/python-modules/langgraph-cli/default.nix b/pkgs/development/python-modules/langgraph-cli/default.nix
index f395d6b61d2c..312d92cf4549 100644
--- a/pkgs/development/python-modules/langgraph-cli/default.nix
+++ b/pkgs/development/python-modules/langgraph-cli/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "langgraph-cli";
-  version = "0.3.6";
+  version = "2.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langgraph";
-    tag = "cli==${version}";
-    hash = "sha256-tBMdFOHSRjw0PtE19XytLU4MmjR3NBLJxUqWoG4L2F8=";
+    tag = "checkpoint==${version}";
+    hash = "sha256-UY3AChShKfOrtOQzOm5vi3Yy3rlBc+TAje9L2L6My/U=";
   };
 
   sourceRoot = "${src.name}/libs/cli";
@@ -87,7 +87,7 @@ buildPythonPackage rec {
   meta = {
     description = "Official CLI for LangGraph API";
     homepage = "https://github.com/langchain-ai/langgraph/tree/main/libs/cli";
-    changelog = "https://github.com/langchain-ai/langgraph/releases/tag/${version}";
+    changelog = "https://github.com/langchain-ai/langgraph/releases/tag/${src.tag}";
     mainProgram = "langgraph";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ sarahec ];
diff --git a/pkgs/development/python-modules/langgraph-sdk/default.nix b/pkgs/development/python-modules/langgraph-sdk/default.nix
index 0b1ce1827528..4b5515c2a5ea 100644
--- a/pkgs/development/python-modules/langgraph-sdk/default.nix
+++ b/pkgs/development/python-modules/langgraph-sdk/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "langgraph-sdk";
-  version = "0.2.0";
+  version = "2.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langgraph";
-    tag = "sdk==${version}";
-    hash = "sha256-uhVdtB/fLy0hfZKfzNV2eoO83bvKppGVl4Lm8IEscL0=";
+    tag = "checkpoint==${version}";
+    hash = "sha256-UY3AChShKfOrtOQzOm5vi3Yy3rlBc+TAje9L2L6My/U=";
   };
 
   sourceRoot = "${src.name}/libs/sdk-py";
diff --git a/pkgs/development/python-modules/langgraph/default.nix b/pkgs/development/python-modules/langgraph/default.nix
index fa5efe2b2ba3..75594ca5d28c 100644
--- a/pkgs/development/python-modules/langgraph/default.nix
+++ b/pkgs/development/python-modules/langgraph/default.nix
@@ -38,14 +38,14 @@
 }:
 buildPythonPackage rec {
   pname = "langgraph";
-  version = "0.6.1";
+  version = "2.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langgraph";
-    tag = version;
-    hash = "sha256-8mubZSV1CDgYzykKaaWqn04yJldAgdGmgZDm54towWc=";
+    tag = "checkpoint==${version}";
+    hash = "sha256-UY3AChShKfOrtOQzOm5vi3Yy3rlBc+TAje9L2L6My/U=";
   };
 
   postgresqlTestSetupPost = ''
diff --git a/pkgs/development/python-modules/langsmith/default.nix b/pkgs/development/python-modules/langsmith/default.nix
index dfa95995f5be..333f714777ca 100644
--- a/pkgs/development/python-modules/langsmith/default.nix
+++ b/pkgs/development/python-modules/langsmith/default.nix
@@ -5,7 +5,7 @@
   fetchFromGitHub,
 
   # build-system
-  poetry-core,
+  hatchling,
 
   # dependencies
   httpx,
@@ -31,21 +31,21 @@
 
 buildPythonPackage rec {
   pname = "langsmith";
-  version = "0.4.9";
+  version = "0.4.11";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "langchain-ai";
     repo = "langsmith-sdk";
     tag = "v${version}";
-    hash = "sha256-7XV85/IN1hG9hYBSg73pymIwIWYAay/18NAsV6Jz4Ik=";
+    hash = "sha256-bLHCkTMgnHM/m9EfzrfIY5148IpAnaCPft718b9/2jM=";
   };
 
   sourceRoot = "${src.name}/python";
 
   pythonRelaxDeps = [ "orjson" ];
 
-  build-system = [ poetry-core ];
+  build-system = [ hatchling ];
 
   dependencies = [
     httpx
diff --git a/pkgs/development/python-modules/lazy-object-proxy/default.nix b/pkgs/development/python-modules/lazy-object-proxy/default.nix
index 33467e6f3b1e..a3d7834f7f50 100644
--- a/pkgs/development/python-modules/lazy-object-proxy/default.nix
+++ b/pkgs/development/python-modules/lazy-object-proxy/default.nix
@@ -1,27 +1,24 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   pytestCheckHook,
   setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "lazy-object-proxy";
-  version = "1.10.0";
-  format = "setuptools";
+  version = "1.11.0";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-eCR7bUX0OlLvNcJbVYFFnoURciVAikEoo9r4v5ZIrGk=";
+  src = fetchFromGitHub {
+    owner = "ionelmc";
+    repo = "python-lazy-object-proxy";
+    tag = "v${version}";
+    hash = "sha256-iOftyGx5wLxIUwlmo1lY06MXqgxfZek6RR1S5UydOEs=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
-
-  postPatch = ''
-    substituteInPlace pyproject.toml --replace ",<6.0" ""
-    substituteInPlace setup.cfg --replace ",<6.0" ""
-  '';
+  build-system = [ setuptools-scm ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/ledgerblue/default.nix b/pkgs/development/python-modules/ledgerblue/default.nix
index a53dfbce8b96..95c9c6cb6474 100644
--- a/pkgs/development/python-modules/ledgerblue/default.nix
+++ b/pkgs/development/python-modules/ledgerblue/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "ledgerblue";
-  version = "0.1.54";
+  version = "0.1.55";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Hn99ST6RnER6XI6+rqA3O9/aC+whYoTOzeoHGF/fFz4=";
+    hash = "sha256-6s2V8cXik6jEg8z3UK49qVwodPbwXMIkWk7iJ7OY0rM=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/levenshtein/default.nix b/pkgs/development/python-modules/levenshtein/default.nix
index a218eec80568..9b1b1ca28f85 100644
--- a/pkgs/development/python-modules/levenshtein/default.nix
+++ b/pkgs/development/python-modules/levenshtein/default.nix
@@ -23,6 +23,11 @@ buildPythonPackage rec {
     hash = "sha256-EFEyP7eqB4sUQ2ksD67kCr0BEShTiKWbk1PxXOUOGc4=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "Cython>=3.0.12,<3.1.0" Cython
+  '';
+
   build-system = [
     cmake
     cython
diff --git a/pkgs/development/python-modules/lib4sbom/default.nix b/pkgs/development/python-modules/lib4sbom/default.nix
index 5b8b4297cdf3..9515619827df 100644
--- a/pkgs/development/python-modules/lib4sbom/default.nix
+++ b/pkgs/development/python-modules/lib4sbom/default.nix
@@ -3,16 +3,18 @@
   buildPythonPackage,
   defusedxml,
   fetchFromGitHub,
+  jsonschema,
   pytestCheckHook,
   pythonOlder,
   pyyaml,
   semantic-version,
   setuptools,
+  xmlschema,
 }:
 
 buildPythonPackage rec {
   pname = "lib4sbom";
-  version = "0.8.4";
+  version = "0.8.7";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,15 +23,17 @@ buildPythonPackage rec {
     owner = "anthonyharrison";
     repo = "lib4sbom";
     tag = "v${version}";
-    hash = "sha256-QTYtaEo5LdDPfv8KgQ3IUJgKphQl2xyQXrcSn19IeKo=";
+    hash = "sha256-qHKedDh7G6yvk6LOs5drJJbkLo20/dP49GG7Q/pOmBw=";
   };
 
   build-system = [ setuptools ];
 
   dependencies = [
     defusedxml
+    jsonschema
     pyyaml
     semantic-version
+    xmlschema
   ];
 
   nativeCheckInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/libarchive-c/default.nix b/pkgs/development/python-modules/libarchive-c/default.nix
index 4eb83031c885..286148a639a7 100644
--- a/pkgs/development/python-modules/libarchive-c/default.nix
+++ b/pkgs/development/python-modules/libarchive-c/default.nix
@@ -3,7 +3,6 @@
   stdenv,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
   libarchive,
   glibcLocales,
   mock,
@@ -12,28 +11,20 @@
 
 buildPythonPackage rec {
   pname = "libarchive-c";
-  version = "5.1";
+  version = "5.3";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "Changaco";
     repo = "python-${pname}";
     tag = version;
-    sha256 = "sha256-CO9llPIbVTuE74AeohrMAu5ICkuT/MorRlYEEFne6Uk=";
+    sha256 = "sha256-JqXTV1aD3k88OlW+8rT3xsDuW34+1xErG7hkupvL7Uo=";
   };
 
-  patches = [
-    (fetchpatch {
-      name = "fix-tests-with-recent-libarchive.patch";
-      url = "https://github.com/Changaco/python-libarchive-c/commit/a56e9402c76c2fb9631651de7bae07b5fbb0b624.patch";
-      hash = "sha256-OLwJQurEFAmwZJbQfhkibrR7Rcnc9vpWwBuhKxgmT7g=";
-    })
-  ];
-
   LC_ALL = "en_US.UTF-8";
 
   postPatch = ''
-    substituteInPlace libarchive/ffi.py --replace \
+    substituteInPlace libarchive/ffi.py --replace-fail \
       "find_library('archive')" "'${libarchive.lib}/lib/libarchive${stdenv.hostPlatform.extensions.sharedLibrary}'"
   '';
 
diff --git a/pkgs/development/python-modules/libbs/default.nix b/pkgs/development/python-modules/libbs/default.nix
index d52182af3482..b69b2c3ddde6 100644
--- a/pkgs/development/python-modules/libbs/default.nix
+++ b/pkgs/development/python-modules/libbs/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "libbs";
-  version = "2.13.0";
+  version = "2.15.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "binsync";
     repo = "libbs";
     tag = "v${version}";
-    hash = "sha256-QNiI8qNqh3DlYoGcfExu5PXK1FHXRmcyefMsAfpOMy0=";
+    hash = "sha256-i5y0aPCBcCzR2pYYtdxy9OEFFF47chINMRfhj9zAf7g=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/libevdev/default.nix b/pkgs/development/python-modules/libevdev/default.nix
index 1d511b3afae5..814dee247324 100644
--- a/pkgs/development/python-modules/libevdev/default.nix
+++ b/pkgs/development/python-modules/libevdev/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "libevdev";
-  version = "0.11";
+  version = "0.12";
   format = "setuptools";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-6coAak3ySIpgvZp0ABHulI2BkEviNk8BflYBaVCPVg8=";
+    hash = "sha256-AulSYy7GwknLucZvb6AAEupEiwZgbHfNE5EzvC/kawg=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/libpass/default.nix b/pkgs/development/python-modules/libpass/default.nix
index cfa17149b350..80480c9e22c8 100644
--- a/pkgs/development/python-modules/libpass/default.nix
+++ b/pkgs/development/python-modules/libpass/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "libpass";
-  version = "1.9.1";
+  version = "1.9.1.post0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ThirVondukr";
     repo = "passlib";
     tag = version;
-    hash = "sha256-G6Fu1RjVb+OPdxt2hWpgAzTefRA41S0zV4hSvvCEWEA=";
+    hash = "sha256-4J18UktqllRA8DVdHL4AJUuAkjZRdUjiql9a71XXhCA=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/limnoria/default.nix b/pkgs/development/python-modules/limnoria/default.nix
index bef6495dd28f..951b441068f6 100644
--- a/pkgs/development/python-modules/limnoria/default.nix
+++ b/pkgs/development/python-modules/limnoria/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "limnoria";
-  version = "2025.5.3";
+  version = "2025.7.18";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EZ42Ufnw3sUM1fM3+hTreKr58QOgeRANilXP9uxU/Cs=";
+    hash = "sha256-iXu+ObOFd0iQae8/mY2ztt7s4kuKutX3huHN7jP3cHE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/line-profiler/default.nix b/pkgs/development/python-modules/line-profiler/default.nix
index 7d1642440914..5bc0a75e4209 100644
--- a/pkgs/development/python-modules/line-profiler/default.nix
+++ b/pkgs/development/python-modules/line-profiler/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "line-profiler";
-  version = "4.2.0";
+  version = "5.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.8" || isPyPy;
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "line_profiler";
     inherit version;
-    hash = "sha256-CeEPJfh2UUOAs/rubek/sMIoq7qFgguhpZHds+tFGpY=";
+    hash = "sha256-qA8K+wW6DSddnd3F/5fqtjdHEWf/Pmbcx9E1dVBZOYw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/litestar/default.nix b/pkgs/development/python-modules/litestar/default.nix
index abf46e6fce89..ed087bbc005d 100644
--- a/pkgs/development/python-modules/litestar/default.nix
+++ b/pkgs/development/python-modules/litestar/default.nix
@@ -43,14 +43,14 @@
 
 buildPythonPackage rec {
   pname = "litestar";
-  version = "2.13.0";
+  version = "2.16.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "litestar-org";
     repo = "litestar";
     tag = "v${version}";
-    hash = "sha256-PR2DVNRtILHs7XwVi9/ZCVRJQFqfGLn1x2gpYtYjHDo=";
+    hash = "sha256-67O/NxPBBLa1QfH1o9laOAQEin8jRA8SkcV7QEzCjI0=";
   };
 
   build-system = [
@@ -105,7 +105,7 @@ buildPythonPackage rec {
     homepage = "https://litestar.dev/";
     platforms = lib.platforms.unix;
     maintainers = with lib.maintainers; [ bot-wxt1221 ];
-    changelog = "https://github.com/litestar-org/litestar/releases/tag/v${version}";
+    changelog = "https://github.com/litestar-org/litestar/releases/tag/${src.tag}";
     description = "Production-ready, Light, Flexible and Extensible ASGI API framework";
     license = lib.licenses.mit;
     mainProgram = "litestar";
diff --git a/pkgs/development/python-modules/livekit-api/default.nix b/pkgs/development/python-modules/livekit-api/default.nix
index d1b13ef1e49f..6dc8377f023a 100644
--- a/pkgs/development/python-modules/livekit-api/default.nix
+++ b/pkgs/development/python-modules/livekit-api/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "livekit-api";
-  version = "1.0.5";
+  version = "1.0.12";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "livekit";
     repo = "python-sdks";
-    tag = "api-v${version}";
-    hash = "sha256-GoVPOLA4aCC26+x9//mlmOO6tb3dczN+s1C+VtGRiRE=";
+    tag = "rtc-v${version}";
+    hash = "sha256-NfFlj44aRMA7oUXyIKljNdtb/2MLvjIJGcAvIGNbNxM=";
   };
 
   pypaBuildFlags = [ "livekit-api" ];
diff --git a/pkgs/development/python-modules/livekit-protocol/default.nix b/pkgs/development/python-modules/livekit-protocol/default.nix
index af1cf54caf20..c2dfe95f1243 100644
--- a/pkgs/development/python-modules/livekit-protocol/default.nix
+++ b/pkgs/development/python-modules/livekit-protocol/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "livekit-protocol";
-  version = "1.0.4";
+  version = "1.0.12";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "livekit";
     repo = "python-sdks";
-    tag = "protocol-v${version}";
-    hash = "sha256-W9WmruzN5Nm9vrjG1Kcf3Orst0b2Mxm80hKLjwXowl8=";
+    tag = "rtc-v${version}";
+    hash = "sha256-NfFlj44aRMA7oUXyIKljNdtb/2MLvjIJGcAvIGNbNxM=";
   };
 
   pypaBuildFlags = [ "livekit-protocol" ];
diff --git a/pkgs/development/python-modules/livisi/default.nix b/pkgs/development/python-modules/livisi/default.nix
index 5bb7bfc5208d..ac9f5f3d24ad 100644
--- a/pkgs/development/python-modules/livisi/default.nix
+++ b/pkgs/development/python-modules/livisi/default.nix
@@ -4,20 +4,21 @@
   colorlog,
   fetchFromGitHub,
   lib,
+  python-dateutil,
   setuptools,
   websockets,
 }:
 
 buildPythonPackage rec {
   pname = "livisi";
-  version = "0.0.25";
+  version = "1.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "planbnet";
     repo = "livisi";
     tag = "v${version}";
-    hash = "sha256-kEkbuZmYzxhrbTdo7eZJYu2N2uJtfspgqepplXvSXFg=";
+    hash = "sha256-5TRJfI4irg2/ZxpfgzShXE08HWU2aWLR8zGbrZKpwbc=";
   };
 
   pythonRelaxDeps = [ "colorlog" ];
@@ -27,6 +28,7 @@ buildPythonPackage rec {
   dependencies = [
     aiohttp
     colorlog
+    python-dateutil
     websockets
   ];
 
diff --git a/pkgs/development/python-modules/llama-cloud/default.nix b/pkgs/development/python-modules/llama-cloud/default.nix
index 532633f8a955..b74c23ce0d30 100644
--- a/pkgs/development/python-modules/llama-cloud/default.nix
+++ b/pkgs/development/python-modules/llama-cloud/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-cloud";
-  version = "0.1.34";
+  version = "0.1.37";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_cloud";
     inherit version;
-    hash = "sha256-aGbkurR9LBhAvfFpwTwGF2kxwdMGl6wfpxureUKgQek=";
+    hash = "sha256-ttYuc4bRqoWQW34/fBmkBpS+VMFZZmi86qRWzYTt5mY=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-cli/default.nix b/pkgs/development/python-modules/llama-index-cli/default.nix
index 64e8f8d4d8ec..62517983f525 100644
--- a/pkgs/development/python-modules/llama-index-cli/default.nix
+++ b/pkgs/development/python-modules/llama-index-cli/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "llama-index-cli";
-  version = "0.4.4";
+  version = "0.5.0";
   pyproject = true;
 
   src = fetchPypi {
     pname = "llama_index_cli";
     inherit version;
-    hash = "sha256-w68M8eKn5e9E0Lrlqo6IcrVMXda3Ma+66fE//rSZe+A=";
+    hash = "sha256-LrlCYjLo2J/98PpnhP+NoJRJ2SDXHQ/MgdB76Tz5Np8=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-core/default.nix b/pkgs/development/python-modules/llama-index-core/default.nix
index 3109f18373b7..688c6238544a 100644
--- a/pkgs/development/python-modules/llama-index-core/default.nix
+++ b/pkgs/development/python-modules/llama-index-core/default.nix
@@ -39,7 +39,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-core";
-  version = "0.12.46";
+  version = "0.13.0.post1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -48,7 +48,7 @@ buildPythonPackage rec {
     owner = "run-llama";
     repo = "llama_index";
     tag = "v${version}";
-    hash = "sha256-B1i5zabacapc/ipPTQtQzLVZql5ifqxfFoDhaBR+eYc=";
+    hash = "sha256-X4PDvxynQkHOdhDC5Aqwnr3jSF/83VgbFiDD1M9LOoM=";
   };
 
   sourceRoot = "${src.name}/${pname}";
diff --git a/pkgs/development/python-modules/llama-index-embeddings-gemini/default.nix b/pkgs/development/python-modules/llama-index-embeddings-gemini/default.nix
index 8022f766c45c..2bf7acb72d83 100644
--- a/pkgs/development/python-modules/llama-index-embeddings-gemini/default.nix
+++ b/pkgs/development/python-modules/llama-index-embeddings-gemini/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-embeddings-gemini";
-  version = "0.3.2";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_embeddings_gemini";
     inherit version;
-    hash = "sha256-Ske1mqNVBXYirf3BGFAkZqeFywXntMLHNuR/+pjDupU=";
+    hash = "sha256-Cyy89LP4B+J4fbMQmyZyH3VrRSnX7A0U6zGIvS0xPqw=";
   };
 
   pythonRelaxDeps = [ "google-generativeai" ];
diff --git a/pkgs/development/python-modules/llama-index-embeddings-google/default.nix b/pkgs/development/python-modules/llama-index-embeddings-google/default.nix
index b5cfb79df1ff..e984a934cc0b 100644
--- a/pkgs/development/python-modules/llama-index-embeddings-google/default.nix
+++ b/pkgs/development/python-modules/llama-index-embeddings-google/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-embeddings-google";
-  version = "0.3.1";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_embeddings_google";
     inherit version;
-    hash = "sha256-gMFfA/USIYkOIaNPZfpLoRzkDGnN2e+gNlylAOrTxKs=";
+    hash = "sha256-wVtJ+BAX49/Ijga9cUXB6xcOrK+IkOzjj+Wgd0cRRb0=";
   };
 
   pythonRelaxDeps = [ "google-generativeai" ];
diff --git a/pkgs/development/python-modules/llama-index-embeddings-huggingface/default.nix b/pkgs/development/python-modules/llama-index-embeddings-huggingface/default.nix
index 39c334ced50f..5add4ba28966 100644
--- a/pkgs/development/python-modules/llama-index-embeddings-huggingface/default.nix
+++ b/pkgs/development/python-modules/llama-index-embeddings-huggingface/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-embeddings-huggingface";
-  version = "0.5.5";
+  version = "0.6.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_embeddings_huggingface";
     inherit version;
-    hash = "sha256-f26aAx2RRvI131l8DM1igM3pa5tDf5kFLOebty5frF4=";
+    hash = "sha256-Ps59jFtoPSBV/t7KRFfeoT91yBptf7lNd+h4zXPZDZc=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-embeddings-ollama/default.nix b/pkgs/development/python-modules/llama-index-embeddings-ollama/default.nix
index 4ad411a7a43b..b6e00c2d616c 100644
--- a/pkgs/development/python-modules/llama-index-embeddings-ollama/default.nix
+++ b/pkgs/development/python-modules/llama-index-embeddings-ollama/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-embeddings-ollama";
-  version = "0.6.0";
+  version = "0.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_embeddings_ollama";
     inherit version;
-    hash = "sha256-7GL6vymKzrNNIFpQmKLcK9eSTT2bVmwkyh69ZLw9/pA=";
+    hash = "sha256-StV3rCFInL4oi/YEytu9s1a9rx9qdC7MG6uN855pOvQ=";
   };
 
   pythonRelaxDeps = [ "ollama" ];
diff --git a/pkgs/development/python-modules/llama-index-embeddings-openai/default.nix b/pkgs/development/python-modules/llama-index-embeddings-openai/default.nix
index 4040659ac664..1f4da3f6b17c 100644
--- a/pkgs/development/python-modules/llama-index-embeddings-openai/default.nix
+++ b/pkgs/development/python-modules/llama-index-embeddings-openai/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-embeddings-openai";
-  version = "0.3.1";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_embeddings_openai";
     inherit version;
-    hash = "sha256-E2iq084ky67SPVrSUTQ87x63tKBtZWPWYG1ZyzR/7yA=";
+    hash = "sha256-rFh4OaERCJ6opiVfkhQBbXqBOzg7u7+SB3mb4RAHWOs=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-graph-stores-nebula/default.nix b/pkgs/development/python-modules/llama-index-graph-stores-nebula/default.nix
index b89b802b0d77..f08c410a191e 100644
--- a/pkgs/development/python-modules/llama-index-graph-stores-nebula/default.nix
+++ b/pkgs/development/python-modules/llama-index-graph-stores-nebula/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-graph-stores-nebula";
-  version = "0.4.2";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_graph_stores_nebula";
     inherit version;
-    hash = "sha256-0CooGtmDz9OAJ+B543eFbrFTzii5iXwmo0dV4c/E/es=";
+    hash = "sha256-BzArWYZIY1SRl1q48wAdAy+mWoId+lNbcsw9LQmmw7Q=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-graph-stores-neo4j/default.nix b/pkgs/development/python-modules/llama-index-graph-stores-neo4j/default.nix
index 0c253982aa61..ee1a9fa73c3f 100644
--- a/pkgs/development/python-modules/llama-index-graph-stores-neo4j/default.nix
+++ b/pkgs/development/python-modules/llama-index-graph-stores-neo4j/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-graph-stores-neo4j";
-  version = "0.4.6";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_graph_stores_neo4j";
     inherit version;
-    hash = "sha256-wTmLGWu/Wnrs1sXqs4LFigJVR+/iAGWxUv6oTFGfLBQ=";
+    hash = "sha256-Iumsnln5iGMAoB3aY4haecm87jYXlEW4/2+uppW8m9c=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-graph-stores-neptune/default.nix b/pkgs/development/python-modules/llama-index-graph-stores-neptune/default.nix
index 98bf1e735e19..79c0866688bb 100644
--- a/pkgs/development/python-modules/llama-index-graph-stores-neptune/default.nix
+++ b/pkgs/development/python-modules/llama-index-graph-stores-neptune/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-graph-stores-neptune";
-  version = "0.3.3";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_graph_stores_neptune";
     inherit version;
-    hash = "sha256-IqY4dEWcbM9371vuZ7C9NlDux9O/j6wF7Hcc4aiBiIE=";
+    hash = "sha256-kSAfIh683fwahMjSgp0dYHmNR+NGBr71Q/OFxGtkUTc=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-indices-managed-llama-cloud/default.nix b/pkgs/development/python-modules/llama-index-indices-managed-llama-cloud/default.nix
index 0372283f8d2a..4d4ebf6add42 100644
--- a/pkgs/development/python-modules/llama-index-indices-managed-llama-cloud/default.nix
+++ b/pkgs/development/python-modules/llama-index-indices-managed-llama-cloud/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-indices-managed-llama-cloud";
-  version = "0.7.10";
+  version = "0.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_indices_managed_llama_cloud";
     inherit version;
-    hash = "sha256-UyZ5B+I9j7y7l8epYXekFEbeGFUMpgMCdgkuc7RcqIA=";
+    hash = "sha256-+6rbauPucS2vQ5qpvjZ+3h+LGQAYtVAQ18NTddKc5Lc=";
   };
 
   pythonRelaxDeps = [ "llama-cloud" ];
diff --git a/pkgs/development/python-modules/llama-index-llms-ollama/default.nix b/pkgs/development/python-modules/llama-index-llms-ollama/default.nix
index 85be869d1e2d..675e10bbd9fb 100644
--- a/pkgs/development/python-modules/llama-index-llms-ollama/default.nix
+++ b/pkgs/development/python-modules/llama-index-llms-ollama/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-llms-ollama";
-  version = "0.6.2";
+  version = "0.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_llms_ollama";
     inherit version;
-    hash = "sha256-G+QIHwupyd07XScMLoAJwlaztqExLLOKDHJNuousEwQ=";
+    hash = "sha256-ThKtTl6mEAZsTgeTVpnFnZMkffIhh27X9+Gn9wwzs8c=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-llms-openai-like/default.nix b/pkgs/development/python-modules/llama-index-llms-openai-like/default.nix
index 7fb71c87f8e5..1668fd637929 100644
--- a/pkgs/development/python-modules/llama-index-llms-openai-like/default.nix
+++ b/pkgs/development/python-modules/llama-index-llms-openai-like/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-llms-openai-like";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_llms_openai_like";
     inherit version;
-    hash = "sha256-Fa4cFrAboL+oItU5APA+NcGf/ke1KJWCNL8ZQqkfWHw=";
+    hash = "sha256-lFe+3rY7aVThUPxntC5EbjdTpxSqkDoAdiUvt8IN/+4=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-llms-openai/default.nix b/pkgs/development/python-modules/llama-index-llms-openai/default.nix
index 6c8184258300..b81017db54ed 100644
--- a/pkgs/development/python-modules/llama-index-llms-openai/default.nix
+++ b/pkgs/development/python-modules/llama-index-llms-openai/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-llms-openai";
-  version = "0.4.7";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_llms_openai";
     inherit version;
-    hash = "sha256-Vkr4qzn7Pzrf6uc6WcDcpGwJmrhEoo5yXu4MVR1Iafg=";
+    hash = "sha256-CJlnMoLFjRmlu/ImFqAQkCROMIcm05KiTkZJOZMkdg8=";
   };
 
   pythonRemoveDeps = [
diff --git a/pkgs/development/python-modules/llama-index-multi-modal-llms-openai/default.nix b/pkgs/development/python-modules/llama-index-multi-modal-llms-openai/default.nix
index 63bac0367ff0..2b1954b76fa3 100644
--- a/pkgs/development/python-modules/llama-index-multi-modal-llms-openai/default.nix
+++ b/pkgs/development/python-modules/llama-index-multi-modal-llms-openai/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "llama-index-multi-modal-llms-openai";
-  version = "0.5.1";
+  version = "0.6.0";
   pyproject = true;
 
   src = fetchPypi {
     pname = "llama_index_multi_modal_llms_openai";
     inherit version;
-    hash = "sha256-3zr/AMNgI8X4xJ+XKjJfcYI+0PTdnNR5lV12r8FGV18=";
+    hash = "sha256-4YWvPQH5GevRVsmegIXU5AApt+nsMEj0DSDebWsPYR4=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-readers-database/default.nix b/pkgs/development/python-modules/llama-index-readers-database/default.nix
index aecb2c627899..c52b6f97c072 100644
--- a/pkgs/development/python-modules/llama-index-readers-database/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-database/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-database";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_database";
     inherit version;
-    hash = "sha256-BdZzn2T3EkR0N3C0uEF3kj1QV5Qnzut7yapAVxdc7C8=";
+    hash = "sha256-5eaNufjXiM4sgc101d19Z3W3CQLE3m8uLa1GOPh05ek=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-readers-file/default.nix b/pkgs/development/python-modules/llama-index-readers-file/default.nix
index ed3ba1adece5..c3af3b457026 100644
--- a/pkgs/development/python-modules/llama-index-readers-file/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-file/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-file";
-  version = "0.4.11";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_file";
     inherit version;
-    hash = "sha256-GyHLZteN1fYOhxZgfZpHzNgbs5EG1FlmW+HKd5npWXs=";
+    hash = "sha256-8yRhe/xNmzITbSX/U1G5K8C1aaKWFz7iqFkcH4hu/ww=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/llama-index-readers-json/default.nix b/pkgs/development/python-modules/llama-index-readers-json/default.nix
index f16f736469c2..434430ee7969 100644
--- a/pkgs/development/python-modules/llama-index-readers-json/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-json/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-json";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_json";
     inherit version;
-    hash = "sha256-mS8nEK8LV1wVh0wV7W8EujLH7QcPagHI4P5cT0bHAJ4=";
+    hash = "sha256-ThQWERdEzPIAUaYWQDkSJdIIvixrKv0eN4LGRaNaS3U=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-readers-llama-parse/default.nix b/pkgs/development/python-modules/llama-index-readers-llama-parse/default.nix
index d06fd69723ec..9b415779ee92 100644
--- a/pkgs/development/python-modules/llama-index-readers-llama-parse/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-llama-parse/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-llama-parse";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_llama_parse";
     inherit version;
-    hash = "sha256-6Z7Fb0+FRtf9oafBriYWL7mst+vKw0O1q9tCNLRkTg8=";
+    hash = "sha256-iRsh+2P+H+ci4jz6Jjp02ac1Tl2NegHy1AQKUvjY/u8=";
   };
 
   pythonRelaxDeps = [ "llama-parse" ];
diff --git a/pkgs/development/python-modules/llama-index-readers-s3/default.nix b/pkgs/development/python-modules/llama-index-readers-s3/default.nix
index f7cf53876802..9f40cadfdf5c 100644
--- a/pkgs/development/python-modules/llama-index-readers-s3/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-s3/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-s3";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_s3";
     inherit version;
-    hash = "sha256-oCXpLZyIrZKNNDg8hkEh5xxXEqz7B1hLjE5OUwEIozg=";
+    hash = "sha256-3wzxfKkwhC4YfUYPBa/XKqIZQ6zLgB9SSHR+vPhwzOA=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-readers-twitter/default.nix b/pkgs/development/python-modules/llama-index-readers-twitter/default.nix
index 6cc9844dcbc3..97e07d49f89d 100644
--- a/pkgs/development/python-modules/llama-index-readers-twitter/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-twitter/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-twitter";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_twitter";
     inherit version;
-    hash = "sha256-I7xZQj/Kpwl6D0ltNuKI7TYoQVD9lBiM6I63C23hCwY=";
+    hash = "sha256-AfruOaKbPJasPS0eQjr6501yt32nQ7PvFwD2QVdgBYA=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-readers-txtai/default.nix b/pkgs/development/python-modules/llama-index-readers-txtai/default.nix
index 4024b1c33f95..a6cfc2c6568b 100644
--- a/pkgs/development/python-modules/llama-index-readers-txtai/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-txtai/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-txtai";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_txtai";
     inherit version;
-    hash = "sha256-N5FiwVZ+KWEQlcfVqHVcHJHzRb6Ct+iR2Dc+Wee7y+M=";
+    hash = "sha256-0eOJ9r27lG6WwOz27+N5qldROoaU5UAewtY4N4m8Kcs=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-readers-weather/default.nix b/pkgs/development/python-modules/llama-index-readers-weather/default.nix
index 225cfb6c75b7..6b24f3b8f9f5 100644
--- a/pkgs/development/python-modules/llama-index-readers-weather/default.nix
+++ b/pkgs/development/python-modules/llama-index-readers-weather/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-readers-weather";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_readers_weather";
     inherit version;
-    hash = "sha256-oGk2M/YaVm8pY4JDFOWGkKbDhEfd/OYBgWLSzV3peAQ=";
+    hash = "sha256-qgrHlJXOKWY5UnB2lZAJun3xA9sxn5+ZNNI6+aDnE98=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/llama-index-vector-stores-chroma/default.nix b/pkgs/development/python-modules/llama-index-vector-stores-chroma/default.nix
index 1fb8eaf7c126..53d96d53493f 100644
--- a/pkgs/development/python-modules/llama-index-vector-stores-chroma/default.nix
+++ b/pkgs/development/python-modules/llama-index-vector-stores-chroma/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-vector-stores-chroma";
-  version = "0.4.2";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_vector_stores_chroma";
     inherit version;
-    hash = "sha256-F0YzgV4KiDiutiiBbiz10djG+PaEf0J+ADLTUHHq0ME=";
+    hash = "sha256-5gkwYvmBXeRxGBL1CoM5H/obYDTceap1TP00uv8SDs4=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llama-index-vector-stores-google/default.nix b/pkgs/development/python-modules/llama-index-vector-stores-google/default.nix
index ca7b63b1c078..7449e0113e1a 100644
--- a/pkgs/development/python-modules/llama-index-vector-stores-google/default.nix
+++ b/pkgs/development/python-modules/llama-index-vector-stores-google/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-vector-stores-google";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_vector_stores_google";
     inherit version;
-    hash = "sha256-6l4MFO7h5xJexN3Sf78F+OgzaKHNWxOffQvkqRhXEJw=";
+    hash = "sha256-EjokpP+46z/OwgmtQO4OnL+w4mUFR0M+2MmycojAc7E=";
   };
 
   pythonRelaxDeps = [ "google-generativeai" ];
diff --git a/pkgs/development/python-modules/llama-index-vector-stores-postgres/default.nix b/pkgs/development/python-modules/llama-index-vector-stores-postgres/default.nix
index ae044cb1e4a4..ab54499442bf 100644
--- a/pkgs/development/python-modules/llama-index-vector-stores-postgres/default.nix
+++ b/pkgs/development/python-modules/llama-index-vector-stores-postgres/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "llama-index-vector-stores-postgres";
-  version = "0.5.5";
+  version = "0.6.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "llama_index_vector_stores_postgres";
     inherit version;
-    hash = "sha256-R0dJXw6msPwO7kjsLLXyxSsmmAC64yviJZzb8YUbrlQ=";
+    hash = "sha256-E+PFvOTRO3FGGSwFwEUe0fEpmuE/fmRtiCGHwO53qm4=";
   };
 
   pythonRemoveDeps = [ "psycopg2-binary" ];
diff --git a/pkgs/development/python-modules/llama-index-vector-stores-qdrant/default.nix b/pkgs/development/python-modules/llama-index-vector-stores-qdrant/default.nix
index d5cc82737303..b77fe1aeee91 100644
--- a/pkgs/development/python-modules/llama-index-vector-stores-qdrant/default.nix
+++ b/pkgs/development/python-modules/llama-index-vector-stores-qdrant/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "llama-index-vector-stores-qdrant";
-  version = "0.6.1";
+  version = "0.7.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "llama_index_vector_stores_qdrant";
     inherit version;
-    hash = "sha256-14hQ/MCrwf1tucVprPbo2mLRuBWaHI0S515sbNB3Q1I=";
+    hash = "sha256-1RpWHcWq0nDEu+1yNwzqkALkty0AOOxbRl9rzbZ7EhM=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/llm-echo/default.nix b/pkgs/development/python-modules/llm-echo/default.nix
index 588b6f64909d..d0ed2f5ab533 100644
--- a/pkgs/development/python-modules/llm-echo/default.nix
+++ b/pkgs/development/python-modules/llm-echo/default.nix
@@ -5,6 +5,7 @@
   setuptools,
   llm,
   llm-echo,
+  pytest-asyncio,
   pytestCheckHook,
   writableTmpDirAsHomeHook,
 }:
@@ -26,6 +27,7 @@ buildPythonPackage rec {
   dependencies = [ llm ];
 
   nativeCheckInputs = [
+    pytest-asyncio
     pytestCheckHook
     writableTmpDirAsHomeHook
   ];
diff --git a/pkgs/development/python-modules/lm-eval/default.nix b/pkgs/development/python-modules/lm-eval/default.nix
index 63087a8505a0..ea57224a4d6c 100644
--- a/pkgs/development/python-modules/lm-eval/default.nix
+++ b/pkgs/development/python-modules/lm-eval/default.nix
@@ -46,14 +46,14 @@
 
 buildPythonPackage rec {
   pname = "lm-eval";
-  version = "0.4.8";
+  version = "0.4.9.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "EleutherAI";
     repo = "lm-evaluation-harness";
     tag = "v${version}";
-    hash = "sha256-F8oy6XTovqiU7FQyuubRsiblSdvfZg9RPIyzRw2GH18=";
+    hash = "sha256-N5NRRabjWxPchwOIkjqYTCKInCmVSY6T5cAmdxNbCkU=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/lm-format-enforcer/default.nix b/pkgs/development/python-modules/lm-format-enforcer/default.nix
index c44943046550..2086dcc17e90 100644
--- a/pkgs/development/python-modules/lm-format-enforcer/default.nix
+++ b/pkgs/development/python-modules/lm-format-enforcer/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "lm-format-enforcer";
-  version = "0.10.11";
+  version = "0.10.12";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "noamgat";
     repo = "lm-format-enforcer";
     tag = "v${version}";
-    hash = "sha256-8BsfA1R/X+wA0H0MqQKn+CljUIT8VdoInoczSGvu74o=";
+    hash = "sha256-7QNJtuRIuHHSXmiyO+6TDxswsbLET2ucXjhz0j7xTvQ=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/lmdb/default.nix b/pkgs/development/python-modules/lmdb/default.nix
index f78b3fe2cf11..a97f71dad212 100644
--- a/pkgs/development/python-modules/lmdb/default.nix
+++ b/pkgs/development/python-modules/lmdb/default.nix
@@ -3,6 +3,7 @@
   buildPythonPackage,
   fetchPypi,
   setuptools,
+  patch-ng,
   pytestCheckHook,
   cffi,
   lmdb,
@@ -11,20 +12,24 @@
 
 buildPythonPackage rec {
   pname = "lmdb";
-  version = "1.6.2";
+  version = "1.7.3";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-0o4/pZk1/2iIWHYOxS8gLsuMEImj9o0fFi6jB40VHnM=";
+    hash = "sha256-1KJ7evT+OPNAnZ+/v0e2F7PZTe6YoAvIwqgzbM0/mxU=";
   };
 
   build-system = [ setuptools ];
 
   buildInputs = [ lmdb ];
 
+  env.LMDB_FORCE_SYSTEM = 1;
+
+  dependencies = [ patch-ng ];
+
   pythonImportsCheck = [ "lmdb" ];
 
   nativeCheckInputs = [
@@ -32,8 +37,6 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
-  LMDB_FORCE_SYSTEM = 1;
-
   meta = {
     description = "Universal Python binding for the LMDB 'Lightning' Database";
     homepage = "https://github.com/dw/py-lmdb";
diff --git a/pkgs/development/python-modules/localstack-ext/default.nix b/pkgs/development/python-modules/localstack-ext/default.nix
index f1fa5ba5278f..0973bccb4157 100644
--- a/pkgs/development/python-modules/localstack-ext/default.nix
+++ b/pkgs/development/python-modules/localstack-ext/default.nix
@@ -21,13 +21,13 @@
 
 buildPythonPackage rec {
   pname = "localstack-ext";
-  version = "4.3.0";
+  version = "4.7.0";
   pyproject = true;
 
   src = fetchPypi {
     pname = "localstack_ext";
     inherit version;
-    hash = "sha256-YlKGdIteeIjqqO9L4BAfEEurOa7vrYaAmreH8gIRcPU=";
+    hash = "sha256-OLeCbAybP6SgHb2DNf8rXUrxt89mOiQfp2wxdh2A3F4=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/locust/default.nix b/pkgs/development/python-modules/locust/default.nix
index 1d7056d38a80..2ed342d62a4f 100644
--- a/pkgs/development/python-modules/locust/default.nix
+++ b/pkgs/development/python-modules/locust/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "locust";
-  version = "2.33.1";
+  version = "2.37.14";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "locustio";
     repo = "locust";
     tag = version;
-    hash = "sha256-cOYdf3F1OF1P4xFEG3isuiePIl1tHnjL7UVoFIpb40A=";
+    hash = "sha256-16pMl72OIZlAi6jNx0qv0TO9RTm6O9CgiE84sndsEhc=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/loopy/default.nix b/pkgs/development/python-modules/loopy/default.nix
index 0be0d9802eb9..4af0824f633a 100644
--- a/pkgs/development/python-modules/loopy/default.nix
+++ b/pkgs/development/python-modules/loopy/default.nix
@@ -30,7 +30,7 @@
 
 buildPythonPackage rec {
   pname = "loopy";
-  version = "2025.1";
+  version = "2025.2";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -39,7 +39,7 @@ buildPythonPackage rec {
     owner = "inducer";
     repo = "loopy";
     tag = "v${version}";
-    hash = "sha256-3Ebnje+EBw2Jdp2xLqffWx592OoUrSdRDXQkw6FpEzc=";
+    hash = "sha256-VgsUOMCIg61mYNDMcGpMs5I1CkobhUFVjoQFdD8Vchs=";
     fetchSubmodules = true; # submodule at `loopy/target/c/compyte`
   };
 
diff --git a/pkgs/development/python-modules/lsprotocol/default.nix b/pkgs/development/python-modules/lsprotocol/default.nix
index 06e85fae1e73..fdb10e5dd3c5 100644
--- a/pkgs/development/python-modules/lsprotocol/default.nix
+++ b/pkgs/development/python-modules/lsprotocol/default.nix
@@ -7,15 +7,14 @@
   flit-core,
   importlib-resources,
   jsonschema,
-  nox,
   pyhamcrest,
-  pytest,
+  pytestCheckHook,
   pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "lsprotocol";
-  version = "2023.0.1";
+  version = "2025.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -24,20 +23,23 @@ buildPythonPackage rec {
     owner = "microsoft";
     repo = "lsprotocol";
     tag = version;
-    hash = "sha256-PHjLKazMaT6W4Lve1xNxm6hEwqE3Lr2m5L7Q03fqb68=";
+    hash = "sha256-DrWXHMgDZSQQ6vsmorThMrUTX3UQU+DajSEOdxoXrFQ=";
   };
 
-  nativeBuildInputs = [
+  postPatch = ''
+    pushd packages/python
+  '';
+
+  build-system = [
     flit-core
-    nox
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     attrs
     cattrs
   ];
 
-  nativeCheckInputs = [ pytest ];
+  nativeCheckInputs = [ pytestCheckHook ];
 
   checkInputs = [
     importlib-resources
@@ -45,21 +47,12 @@ buildPythonPackage rec {
     pyhamcrest
   ];
 
-  preBuild = ''
-    cd packages/python
-  '';
+  disabledTests = [
+    "test_notebook_sync_options"
+  ];
 
   preCheck = ''
-    cd ../../
-  '';
-
-  checkPhase = ''
-    runHook preCheck
-
-    sed -i "/^    _install_requirements/d" noxfile.py
-    nox --session tests
-
-    runHook postCheck
+    popd
   '';
 
   pythonImportsCheck = [ "lsprotocol" ];
@@ -67,7 +60,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python implementation of the Language Server Protocol";
     homepage = "https://github.com/microsoft/lsprotocol";
-    changelog = "https://github.com/microsoft/lsprotocol/releases/tag/${version}";
+    changelog = "https://github.com/microsoft/lsprotocol/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [
       doronbehar
diff --git a/pkgs/development/python-modules/luna-usb/default.nix b/pkgs/development/python-modules/luna-usb/default.nix
index 313f626cd491..1ea097280ed0 100644
--- a/pkgs/development/python-modules/luna-usb/default.nix
+++ b/pkgs/development/python-modules/luna-usb/default.nix
@@ -20,14 +20,14 @@
 }:
 buildPythonPackage rec {
   pname = "luna-usb";
-  version = "0.2.1";
+  version = "0.2.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "greatscottgadgets";
     repo = "luna";
     tag = version;
-    hash = "sha256-8onTF0iJF7HpNCjNxUg89YRjfYb94CrFgGtmprp7g2E=";
+    hash = "sha256-gySaNbebWUS8wS8adPQo1mT+jmdb+2ddlMckTa36JCY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/lupa/default.nix b/pkgs/development/python-modules/lupa/default.nix
index a34a52b5988b..3acc709a3023 100644
--- a/pkgs/development/python-modules/lupa/default.nix
+++ b/pkgs/development/python-modules/lupa/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "lupa";
-  version = "2.4";
+  version = "2.5";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-UwDSH4GqG9TUX1XjHd26O4eYlWlgaKP4TPy1/ZFIqs0=";
+    hash = "sha256-acaonyt7CKMEDX7Soe7MujejHdyS+hmTOcU6KuPEjDQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/lxml/default.nix b/pkgs/development/python-modules/lxml/default.nix
index ec8c3e0c7a90..de73a2010d1c 100644
--- a/pkgs/development/python-modules/lxml/default.nix
+++ b/pkgs/development/python-modules/lxml/default.nix
@@ -3,7 +3,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
 
   # build-system
   cython,
@@ -18,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "lxml";
-  version = "5.4.0";
+  version = "6.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lxml";
     repo = "lxml";
     tag = "lxml-${version}";
-    hash = "sha256-yp0Sb/0Em3HX1XpDNFpmkvW/aXwffB4D1sDYEakwKeY=";
+    hash = "sha256-e1Lhtn8cjuDWkBV29icIqe0CJ59Ab05hBGMa+eRBzAw=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/m2crypto/default.nix b/pkgs/development/python-modules/m2crypto/default.nix
index ca976b887cf6..da94945fa869 100644
--- a/pkgs/development/python-modules/m2crypto/default.nix
+++ b/pkgs/development/python-modules/m2crypto/default.nix
@@ -13,21 +13,15 @@
 
 buildPythonPackage rec {
   pname = "m2crypto";
-  version = "0.45.0";
+  version = "0.45.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-/8ENTQmQFRT0CNx09gpNffIcROvJv3dslHv9xzWUIc8=";
+    hash = "sha256-0PyBqIKO2/QwhDKzBAvwa7JrrZWruefUaQthGFUeduw=";
   };
-  patches = [
-    (fetchurl {
-      url = "https://sources.debian.org/data/main/m/m2crypto/0.42.0-2.1/debian/patches/0004-swig-Workaround-for-reading-sys-select.h-ending-with.patch";
-      hash = "sha256-/Bkuqu/Od+S56AUWo0ZzpZF7FGMxP766K2GJnfKXrOI=";
-    })
-  ];
 
   build-system = [ setuptools ];
 
diff --git a/pkgs/development/python-modules/mail-parser/default.nix b/pkgs/development/python-modules/mail-parser/default.nix
index 25466ec4ff7f..5f31ca8d35c5 100644
--- a/pkgs/development/python-modules/mail-parser/default.nix
+++ b/pkgs/development/python-modules/mail-parser/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "mail-parser";
-  version = "4.1.3";
+  version = "4.1.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "SpamScope";
     repo = "mail-parser";
     tag = version;
-    hash = "sha256-aNPBWxAysxHTuzaupi/CSSBUsGTsFanuPldz6BRr2V0=";
+    hash = "sha256-wwLUD/k26utugK/Yx9eXYEdSOvrk0Cy6RkXGDnzZ+fE=";
   };
 
   LC_ALL = "en_US.utf-8";
diff --git a/pkgs/development/python-modules/makefun/default.nix b/pkgs/development/python-modules/makefun/default.nix
index 2a234b829c68..2929f361f5c2 100644
--- a/pkgs/development/python-modules/makefun/default.nix
+++ b/pkgs/development/python-modules/makefun/default.nix
@@ -8,7 +8,7 @@
   setuptools-scm,
 
   # tests
-  pytestCheckHook,
+  pytest7CheckHook,
 }:
 
 buildPythonPackage rec {
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     setuptools-scm
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest7CheckHook ];
 
   pythonImportsCheck = [ "makefun" ];
 
diff --git a/pkgs/development/python-modules/manifestoo-core/default.nix b/pkgs/development/python-modules/manifestoo-core/default.nix
index c9164c3bce05..8c5d9bebc78e 100644
--- a/pkgs/development/python-modules/manifestoo-core/default.nix
+++ b/pkgs/development/python-modules/manifestoo-core/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "manifestoo-core";
-  version = "1.9";
+  version = "1.10";
   format = "pyproject";
 
   src = fetchPypi {
     inherit version;
     pname = "manifestoo_core";
-    hash = "sha256-4cBgxbjXfOVMRQ+iQnjb/LdRUkoeb2hWI6VhSnqSMVM=";
+    hash = "sha256-LLxr96/cuAAncddMeBBVlFq2Hl5+pNXqgMbvbnfzcE8=";
   };
 
   nativeBuildInputs = [ hatch-vcs ];
diff --git a/pkgs/development/python-modules/manimpango/default.nix b/pkgs/development/python-modules/manimpango/default.nix
index 3137d1e594bb..58cfef91d255 100644
--- a/pkgs/development/python-modules/manimpango/default.nix
+++ b/pkgs/development/python-modules/manimpango/default.nix
@@ -25,6 +25,11 @@ buildPythonPackage rec {
     hash = "sha256-nN+XOnki8fG7URMy2Fhs2X+yNi8Y7wDo53d61xaRa3w=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "Cython>=3.0.2,<3.1" Cython
+  '';
+
   nativeBuildInputs = [ pkg-config ];
 
   buildInputs = [ pango ];
diff --git a/pkgs/development/python-modules/mapclassify/default.nix b/pkgs/development/python-modules/mapclassify/default.nix
index 7bf817fab321..ef30592b9b66 100644
--- a/pkgs/development/python-modules/mapclassify/default.nix
+++ b/pkgs/development/python-modules/mapclassify/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "mapclassify";
-  version = "2.8.1";
+  version = "2.10.0";
   pyproject = true;
   disabled = pythonOlder "3.9";
 
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "pysal";
     repo = "mapclassify";
     tag = "v${version}";
-    hash = "sha256-VClkMOR8P9sX3slVjJ2xYYLVnvZuOgVYZiCGrBxoZEc=";
+    hash = "sha256-OQpDrxa0zRPDAdyS6KP5enb/JZwbYoXTV8kUijV3tNM=";
   };
 
   build-system = [ setuptools-scm ];
@@ -59,7 +59,7 @@ buildPythonPackage rec {
   meta = {
     description = "Classification Schemes for Choropleth Maps";
     homepage = "https://pysal.org/mapclassify/";
-    changelog = "https://github.com/pysal/mapclassify/releases/tag/v${version}";
+    changelog = "https://github.com/pysal/mapclassify/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     teams = [ lib.teams.geospatial ];
   };
diff --git a/pkgs/development/python-modules/mariadb/default.nix b/pkgs/development/python-modules/mariadb/default.nix
index b4b20905dfd4..fde0be2c4c16 100644
--- a/pkgs/development/python-modules/mariadb/default.nix
+++ b/pkgs/development/python-modules/mariadb/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "mariadb";
-  version = "1.1.11";
+  version = "1.1.13";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "mariadb-corporation";
     repo = "mariadb-connector-python";
     tag = "v${version}";
-    hash = "sha256-f3WeVtsjxm/HVPv0cbpPkmklcNFWJaFqI2LxDElcCFw=";
+    hash = "sha256-BYE+W/P2/kPtbi6tzE1FQkI/KFCO5C1KQnB67XfJqkA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/marimo/default.nix b/pkgs/development/python-modules/marimo/default.nix
index 69ba558d227d..267cfc589754 100644
--- a/pkgs/development/python-modules/marimo/default.nix
+++ b/pkgs/development/python-modules/marimo/default.nix
@@ -33,13 +33,13 @@
 
 buildPythonPackage rec {
   pname = "marimo";
-  version = "0.13.6";
+  version = "0.14.16";
   pyproject = true;
 
   # The github archive does not include the static assets
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Qsz0SJvWOJ/MH9eIMyBODCBCGC7vp2lzPsq+32tRKU8=";
+    hash = "sha256-8PKRrH+m+HyAcvQBnG6fY1rX77N+AhTyJUPI3ZgwQtE=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/markdown/default.nix b/pkgs/development/python-modules/markdown/default.nix
index 87020cb9e10f..39f3dda5f21e 100644
--- a/pkgs/development/python-modules/markdown/default.nix
+++ b/pkgs/development/python-modules/markdown/default.nix
@@ -3,6 +3,7 @@
   buildPythonPackage,
   pythonOlder,
   fetchFromGitHub,
+  fetchpatch,
   importlib-metadata,
   pyyaml,
   setuptools,
@@ -11,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "markdown";
-  version = "3.8";
+  version = "3.8.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,9 +21,16 @@ buildPythonPackage rec {
     owner = "Python-Markdown";
     repo = "markdown";
     tag = version;
-    hash = "sha256-H1xvDM2ShiPbfcpW+XGrxCxtaRFVaquuMuGg1RhjeNA=";
+    hash = "sha256-L5OTjllMUrpsKZbK+EHcqlua/6I4onJvRC3povbHgfY=";
   };
 
+  patches = [
+    (fetchpatch {
+      url = "https://github.com/Python-Markdown/markdown/commit/23c301de28e12426408656efdfa153b11d4ff558.patch";
+      hash = "sha256-85HP97iL1umG60jwUgfnHvKHYmws5FSL0xfgZF95aiQ=";
+    })
+  ];
+
   build-system = [ setuptools ];
 
   dependencies = lib.optionals (pythonOlder "3.10") [ importlib-metadata ];
diff --git a/pkgs/development/python-modules/markdown2/default.nix b/pkgs/development/python-modules/markdown2/default.nix
index 832a20c670fd..01fa47856207 100644
--- a/pkgs/development/python-modules/markdown2/default.nix
+++ b/pkgs/development/python-modules/markdown2/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   latex2mathml,
   pygments,
-  pytestCheckHook,
+  pytest7CheckHook,
   pythonOlder,
   setuptools,
   wavedrom,
@@ -28,7 +28,7 @@ buildPythonPackage rec {
 
   pythonImportsCheck = [ "markdown2" ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [ pytest7CheckHook ];
 
   optional-dependencies = {
     code_syntax_highlighting = [ pygments ];
diff --git a/pkgs/development/python-modules/mashumaro/default.nix b/pkgs/development/python-modules/mashumaro/default.nix
index e9e06355a552..d0acb1d790d8 100644
--- a/pkgs/development/python-modules/mashumaro/default.nix
+++ b/pkgs/development/python-modules/mashumaro/default.nix
@@ -54,7 +54,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Serialization library on top of dataclasses";
     homepage = "https://github.com/Fatal1ty/mashumaro";
-    changelog = "https://github.com/Fatal1ty/mashumaro/releases/tag/v${version}";
+    changelog = "https://github.com/Fatal1ty/mashumaro/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ tjni ];
   };
diff --git a/pkgs/development/python-modules/matplotlib/default.nix b/pkgs/development/python-modules/matplotlib/default.nix
index 7f151fe2d364..4c23466b9880 100644
--- a/pkgs/development/python-modules/matplotlib/default.nix
+++ b/pkgs/development/python-modules/matplotlib/default.nix
@@ -80,7 +80,7 @@ let
 in
 
 buildPythonPackage rec {
-  version = "3.10.3";
+  version = "3.10.5";
   pname = "matplotlib";
   pyproject = true;
 
@@ -88,7 +88,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-L4LSxbt66TqqpM1CrKZdds5jdvgzBPo6YwtWmsonTfA=";
+    hash = "sha256-NS7WzPt5mKAIgWkvOLTKCDxpHT4nW0FFQjcEw0yQkHY=";
   };
 
   env.XDG_RUNTIME_DIR = "/tmp";
diff --git a/pkgs/development/python-modules/matrix-nio/default.nix b/pkgs/development/python-modules/matrix-nio/default.nix
index 8c8e0b3828b5..fba252975c70 100644
--- a/pkgs/development/python-modules/matrix-nio/default.nix
+++ b/pkgs/development/python-modules/matrix-nio/default.nix
@@ -29,6 +29,7 @@
   hyperframe,
   hypothesis,
   pytest-aiohttp,
+  pytest-asyncio_0,
   pytest-benchmark,
   pytestCheckHook,
 
@@ -93,7 +94,7 @@ buildPythonPackage rec {
     hpack
     hyperframe
     hypothesis
-    pytest-aiohttp
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
     pytest-benchmark
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/maxminddb/default.nix b/pkgs/development/python-modules/maxminddb/default.nix
index 25de18f228a2..df4ea5f300a9 100644
--- a/pkgs/development/python-modules/maxminddb/default.nix
+++ b/pkgs/development/python-modules/maxminddb/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "maxminddb";
-  version = "2.6.3";
+  version = "2.8.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-0sOAa6p6oEeqG6x0GefjU9tDX4jwnVEQaoTbrPZF0lQ=";
+    hash = "sha256-JqjlNiKNjMKMW49XSlcaJwS+/OOzaM7KWTp21WtlkPk=";
   };
 
   buildInputs = [ libmaxminddb ];
diff --git a/pkgs/development/python-modules/mdtraj/default.nix b/pkgs/development/python-modules/mdtraj/default.nix
index 6d8afed4ab34..fcbc8f4c931c 100644
--- a/pkgs/development/python-modules/mdtraj/default.nix
+++ b/pkgs/development/python-modules/mdtraj/default.nix
@@ -27,14 +27,14 @@
 
 buildPythonPackage rec {
   pname = "mdtraj";
-  version = "1.10.3";
+  version = "1.11.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mdtraj";
     repo = "mdtraj";
     tag = version;
-    hash = "sha256-xmxVPF6GhZpyuTxdmxB7mkfrDb1FIh9Z3obgUOdQmrw=";
+    hash = "sha256-Re8noXZGT+WEW8HzdoHSsr52R06TzLPzfPzHdvweRdQ=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/mesa/default.nix b/pkgs/development/python-modules/mesa/default.nix
index e34ce49d24ec..c26bf68c8582 100644
--- a/pkgs/development/python-modules/mesa/default.nix
+++ b/pkgs/development/python-modules/mesa/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "mesa";
-  version = "3.1.5";
+  version = "3.2.0";
   format = "setuptools";
 
   # According to their docs, this library is for Python 3+.
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "mesa";
     inherit version;
-    hash = "sha256-ZXWQrCwA8PCRNBGpVNxXrpxfx5wMtKPH2djmxqRwwdA=";
+    hash = "sha256-k4UjkUGL4qDgOhucQU7svRNZtM3ZqtO6NUxpl4NhQl0=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/mezzanine/default.nix b/pkgs/development/python-modules/mezzanine/default.nix
index d7f21ee8e2a6..c28ab57e67f8 100644
--- a/pkgs/development/python-modules/mezzanine/default.nix
+++ b/pkgs/development/python-modules/mezzanine/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "mezzanine";
-  version = "6.0.0";
+  version = "6.1.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7" || isPyPy;
@@ -31,7 +31,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Mezzanine";
     inherit version;
-    hash = "sha256-R/PB4PFQpVp6jnCasyPszgC294SKjLzq2oMkR2qV86s=";
+    hash = "sha256-RZ/9ltvZUz1eXxeaVqS9ZE69+a9XWt6fxMcss+yTVP4=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/microsoft-kiota-authentication-azure/default.nix b/pkgs/development/python-modules/microsoft-kiota-authentication-azure/default.nix
index 49a6c420de00..6a32370d1fdf 100644
--- a/pkgs/development/python-modules/microsoft-kiota-authentication-azure/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-authentication-azure/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-authentication-azure";
-  version = "1.9.3";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "microsoft";
     repo = "kiota-python";
     tag = "microsoft-kiota-serialization-text-v${version}";
-    hash = "sha256-FUfVkJbpD0X7U7DPzyoh+84Bk7C07iLT9dmbUeliFu8=";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/authentication/azure/";
diff --git a/pkgs/development/python-modules/microsoft-kiota-http/default.nix b/pkgs/development/python-modules/microsoft-kiota-http/default.nix
index b0633edf960e..2184b1b5378e 100644
--- a/pkgs/development/python-modules/microsoft-kiota-http/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-http/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-http";
-  version = "1.9.4";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "microsoft";
     repo = "kiota-python";
     tag = "microsoft-kiota-serialization-text-v${version}";
-    hash = "sha256-59vuJc7Wb/6PsPA4taAFA2UK8bdz+raZ+NB4S8LahtM=";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/http/httpx/";
diff --git a/pkgs/development/python-modules/microsoft-kiota-serialization-form/default.nix b/pkgs/development/python-modules/microsoft-kiota-serialization-form/default.nix
index 3436f98d41e6..925e3a068bad 100644
--- a/pkgs/development/python-modules/microsoft-kiota-serialization-form/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-serialization-form/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-serialization-form";
-  version = "1.9.3";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "kiota-python";
-    tag = "microsoft-kiota-serialization-form-v${version}";
-    hash = "sha256-FUfVkJbpD0X7U7DPzyoh+84Bk7C07iLT9dmbUeliFu8=";
+    tag = "microsoft-kiota-serialization-text-v${version}";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/serialization/form/";
diff --git a/pkgs/development/python-modules/microsoft-kiota-serialization-json/default.nix b/pkgs/development/python-modules/microsoft-kiota-serialization-json/default.nix
index d7aef7c3100e..3efa60b16cf8 100644
--- a/pkgs/development/python-modules/microsoft-kiota-serialization-json/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-serialization-json/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-serialization-json";
-  version = "1.9.3";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "kiota-python";
-    tag = "microsoft-kiota-serialization-json-v${version}";
-    hash = "sha256-FUfVkJbpD0X7U7DPzyoh+84Bk7C07iLT9dmbUeliFu8=";
+    tag = "microsoft-kiota-serialization-text-v${version}";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/serialization/json/";
diff --git a/pkgs/development/python-modules/microsoft-kiota-serialization-multipart/default.nix b/pkgs/development/python-modules/microsoft-kiota-serialization-multipart/default.nix
index eee939de8263..02a73cf76780 100644
--- a/pkgs/development/python-modules/microsoft-kiota-serialization-multipart/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-serialization-multipart/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-serialization-multipart";
-  version = "1.9.3";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "kiota-python";
-    tag = "microsoft-kiota-serialization-multipart-v${version}";
-    hash = "sha256-FUfVkJbpD0X7U7DPzyoh+84Bk7C07iLT9dmbUeliFu8=";
+    tag = "microsoft-kiota-serialization-text-v${version}";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/serialization/multipart/";
diff --git a/pkgs/development/python-modules/microsoft-kiota-serialization-text/default.nix b/pkgs/development/python-modules/microsoft-kiota-serialization-text/default.nix
index 4fc7fb84b474..4f627b3ee53d 100644
--- a/pkgs/development/python-modules/microsoft-kiota-serialization-text/default.nix
+++ b/pkgs/development/python-modules/microsoft-kiota-serialization-text/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "microsoft-kiota-serialization-text";
-  version = "1.9.3";
+  version = "1.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "microsoft";
     repo = "kiota-python";
     tag = "microsoft-kiota-serialization-text-v${version}";
-    hash = "sha256-FUfVkJbpD0X7U7DPzyoh+84Bk7C07iLT9dmbUeliFu8=";
+    hash = "sha256-h0sZhBIGZyhzYtCvLHRAn73HspgyOAKU3p4xSn+uXFU=";
   };
 
   sourceRoot = "${src.name}/packages/serialization/text/";
diff --git a/pkgs/development/python-modules/mindsdb-evaluator/default.nix b/pkgs/development/python-modules/mindsdb-evaluator/default.nix
index 3abef9cf4cda..2f7b18a34653 100644
--- a/pkgs/development/python-modules/mindsdb-evaluator/default.nix
+++ b/pkgs/development/python-modules/mindsdb-evaluator/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "mindsdb-evaluator";
-  version = "0.0.16";
+  version = "0.0.18";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "mindsdb_evaluator";
     inherit version;
-    hash = "sha256-92XGu6ob1AfOoqcB/hqDf+lSDAUjZ5SPju5FkpcbOHA=";
+    hash = "sha256-UGg7P/OKmRi70z2roRBsA95FAXm7CG+TdPzTRy7+p4w=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/minikanren/default.nix b/pkgs/development/python-modules/minikanren/default.nix
index 9e28d4c6bb8d..911b6edbbd65 100644
--- a/pkgs/development/python-modules/minikanren/default.nix
+++ b/pkgs/development/python-modules/minikanren/default.nix
@@ -10,21 +10,28 @@
   py,
   pytestCheckHook,
   pytest-html,
+  setuptools,
+  setuptools-scm,
 }:
 
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "minikanren";
-  version = "1.0.3";
-  format = "setuptools";
+  version = "1.0.5";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pythological";
     repo = "kanren";
-    rev = "5aa9b1734cbb3fe072a7c72b46e1b72a174d28ac";
-    hash = "sha256-daAtREgm91634Q0mc0/WZivDiyZHC7TIRoGRo8hMnGE=";
+    tag = "v${version}";
+    hash = "sha256-lCQ0mKT99zK5A74uoo/9bP+eFdm3MC43Fh8+P2krXrs=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  dependencies = [
     toolz
     cons
     multipledispatch
@@ -48,7 +55,7 @@ buildPythonPackage {
   meta = with lib; {
     description = "Relational programming in Python";
     homepage = "https://github.com/pythological/kanren";
-    changelog = "https://github.com/pythological/kanren/releases";
+    changelog = "https://github.com/pythological/kanren/releases/tag/${src.tag}";
     license = licenses.bsd3;
     maintainers = with maintainers; [ Etjean ];
   };
diff --git a/pkgs/development/python-modules/mistral-common/default.nix b/pkgs/development/python-modules/mistral-common/default.nix
index 2c6b42a76333..e245f5b7e524 100644
--- a/pkgs/development/python-modules/mistral-common/default.nix
+++ b/pkgs/development/python-modules/mistral-common/default.nix
@@ -16,13 +16,13 @@
 
 buildPythonPackage rec {
   pname = "mistral-common";
-  version = "1.5.6";
+  version = "1.8.3";
   pyproject = true;
 
   src = fetchPypi {
     pname = "mistral_common";
     inherit version;
-    hash = "sha256-TauSQwaEMhFKFfLEb/SRagViCnIrDfjetJ3POD+34r8=";
+    hash = "sha256-DRl52CIntiX21xs8goF28FnajQ9aMwfN9TtIQJo5cKQ=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/mkdocs-material/default.nix b/pkgs/development/python-modules/mkdocs-material/default.nix
index f7ad8267ef8c..3717e7e03b89 100644
--- a/pkgs/development/python-modules/mkdocs-material/default.nix
+++ b/pkgs/development/python-modules/mkdocs-material/default.nix
@@ -28,14 +28,14 @@
 
 buildPythonPackage rec {
   pname = "mkdocs-material";
-  version = "9.6.15";
+  version = "9.6.16";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "squidfunk";
     repo = "mkdocs-material";
     tag = version;
-    hash = "sha256-EksLvPl/VfGSufdqgWlQTd6kz07/pTIAOz7hMBdy8Ro=";
+    hash = "sha256-wGzrlDf6bJFIfJXlCMlOQvRlpOcDXeMVY2/GRjOG1H4=";
   };
 
   nativeBuildInputs = [
@@ -60,6 +60,8 @@ buildPythonPackage rec {
     requests
   ];
 
+  pythonRelaxDeps = [ "backrefs" ];
+
   optional-dependencies = {
     recommended = [
       mkdocs-minify-plugin
diff --git a/pkgs/development/python-modules/mkdocs-swagger-ui-tag/default.nix b/pkgs/development/python-modules/mkdocs-swagger-ui-tag/default.nix
index 095300fa5846..e3174f10b0ad 100644
--- a/pkgs/development/python-modules/mkdocs-swagger-ui-tag/default.nix
+++ b/pkgs/development/python-modules/mkdocs-swagger-ui-tag/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "mkdocs-swagger-ui-tag";
-  version = "0.6.11";
+  version = "0.7.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "Blueswen";
     repo = "mkdocs-swagger-ui-tag";
     tag = "v${version}";
-    hash = "sha256-hxf7onjH26QsdB19r71NSC/67u+pEYdJo3e4OvWGgtI=";
+    hash = "sha256-zn+ASunOiAg/kxsvaHUYKuWc5UZ406RO/LSQ+qkAEn0=";
   };
 
   propagatedBuildInputs = [
@@ -45,7 +45,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "MkDocs plugin supports for add Swagger UI in page";
     homepage = "https://github.com/Blueswen/mkdocs-swagger-ui-tag";
-    changelog = "https://github.com/blueswen/mkdocs-swagger-ui-tag/blob/v${version}/CHANGELOG";
+    changelog = "https://github.com/blueswen/mkdocs-swagger-ui-tag/blob/${src.tag}/CHANGELOG";
     license = licenses.mit;
     maintainers = with maintainers; [ snpschaaf ];
   };
diff --git a/pkgs/development/python-modules/mkl-service/default.nix b/pkgs/development/python-modules/mkl-service/default.nix
index a437f066f4b0..07e7a870b38d 100644
--- a/pkgs/development/python-modules/mkl-service/default.nix
+++ b/pkgs/development/python-modules/mkl-service/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "mkl-service";
-  version = "2.4.2";
+  version = "2.5.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "IntelPython";
     repo = "mkl-service";
     tag = "v${version}";
-    hash = "sha256-o5mjZhqQc7tu44EjrScuGzv6pZNlnZnndMIAhl8pY5o=";
+    hash = "sha256-uP4TzBLhlpT83FIYCjolP3QN5/90YjBOnauy780gUJc=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/mlcroissant/default.nix b/pkgs/development/python-modules/mlcroissant/default.nix
index 96bf7b6dc9f6..510c7d617ace 100644
--- a/pkgs/development/python-modules/mlcroissant/default.nix
+++ b/pkgs/development/python-modules/mlcroissant/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "mlcroissant";
-  version = "1.0.17";
+  version = "1.0.21";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mlcommons";
     repo = "croissant";
     tag = "v${version}";
-    hash = "sha256-jiyr8x+YRSsRwOVxDPaWemPqglTKVb5jg4rRzUXd3BE=";
+    hash = "sha256-yUAF/NQHz8WUIaIIsqOwTMppl5+EZhURFpHnde9OOpE=";
   };
 
   sourceRoot = "${src.name}/python/mlcroissant";
@@ -89,7 +89,7 @@ buildPythonPackage rec {
   meta = {
     description = "High-level format for machine learning datasets that brings together four rich layers";
     homepage = "https://github.com/mlcommons/croissant";
-    changelog = "https://github.com/mlcommons/croissant/releases/tag/v${version}";
+    changelog = "https://github.com/mlcommons/croissant/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ GaetanLepage ];
     platforms = lib.platforms.all;
diff --git a/pkgs/development/python-modules/mlflow/default.nix b/pkgs/development/python-modules/mlflow/default.nix
index bc36ab6d3465..3abe96a35935 100644
--- a/pkgs/development/python-modules/mlflow/default.nix
+++ b/pkgs/development/python-modules/mlflow/default.nix
@@ -71,14 +71,14 @@
 
 buildPythonPackage rec {
   pname = "mlflow";
-  version = "2.20.3";
+  version = "3.1.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mlflow";
     repo = "mlflow";
     tag = "v${version}";
-    hash = "sha256-kgohENAx5PpLQ9pBfl/zSq65l/DqJfufBf0gWR1WJHY=";
+    hash = "sha256-GU1CVwc31bLai8QoXch/UTx//+OG2V/6jG9Ocz4MDuA=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/mlx-lm/default.nix b/pkgs/development/python-modules/mlx-lm/default.nix
index e724bb22ff16..214232169490 100644
--- a/pkgs/development/python-modules/mlx-lm/default.nix
+++ b/pkgs/development/python-modules/mlx-lm/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "mlx-lm";
-  version = "0.26.0";
+  version = "0.26.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ml-explore";
     repo = "mlx-lm";
     tag = "v${version}";
-    hash = "sha256-J69XIqsjQ4sQqhx+EkjKcVXVlQ4A4PGJvICSiCfoSOA=";
+    hash = "sha256-D5csHfkmIM01PkCMT+DDJ2+6as6eVdKNvvHzXcVqdEY=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/mocket/default.nix b/pkgs/development/python-modules/mocket/default.nix
index 7dac034861b0..7c0ae8c4335b 100644
--- a/pkgs/development/python-modules/mocket/default.nix
+++ b/pkgs/development/python-modules/mocket/default.nix
@@ -36,12 +36,12 @@
 
 buildPythonPackage rec {
   pname = "mocket";
-  version = "3.13.4";
+  version = "3.13.10";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-KoZ2V0M4ezW58c65wc9vJHrYMZ2ywKUjCOietKYS94Q=";
+    hash = "sha256-MnFH77ryrLyu//IH6FYb3ZVFlsdkimJKzKGbDH1sgmw=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/modelcif/default.nix b/pkgs/development/python-modules/modelcif/default.nix
index e8b03321620f..242986272bc5 100644
--- a/pkgs/development/python-modules/modelcif/default.nix
+++ b/pkgs/development/python-modules/modelcif/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "modelcif";
-  version = "1.3";
+  version = "1.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ihmwg";
     repo = "python-modelcif";
     tag = version;
-    hash = "sha256-3wuKD6oQp3QdsWRpYsnC5IPpVRcQVDERSClEKJko3dg=";
+    hash = "sha256-Uj6E25uqFdCo2lGf0Cmhc7rs3Rwj7vkpe2G0uhv53gc=";
   };
 
   build-system = [
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python package for handling ModelCIF mmCIF and BinaryCIF files";
     homepage = "https://github.com/ihmwg/python-modelcif";
-    changelog = "https://github.com/ihmwg/python-modelcif/blob/${src.rev}/ChangeLog.rst";
+    changelog = "https://github.com/ihmwg/python-modelcif/blob/${src.tag}/ChangeLog.rst";
     license = licenses.mit;
     maintainers = with maintainers; [ natsukium ];
   };
diff --git a/pkgs/development/python-modules/monai-deploy/default.nix b/pkgs/development/python-modules/monai-deploy/default.nix
index fc5982711dfa..3ae67044ff93 100644
--- a/pkgs/development/python-modules/monai-deploy/default.nix
+++ b/pkgs/development/python-modules/monai-deploy/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "monai-deploy";
-  version = "0.5.1";
+  version = "3.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "Project-MONAI";
     repo = "monai-deploy-app-sdk";
     tag = version;
-    hash = "sha256-a5WtU+1XjsYsXB/uZS8ufE0fOOWDf+Wy7mOX2xPEQEg=";
+    hash = "sha256-W2GXVd4gWgfGLjXR+8m/Ztm52Agj4FGWtEFrh4mjYk0=";
   };
 
   postPatch = ''
@@ -68,7 +68,7 @@ buildPythonPackage rec {
     description = "Framework and tools to design, develop and verify AI applications in healthcare imaging";
     mainProgram = "monai-deploy";
     homepage = "https://monai.io/deploy.html";
-    changelog = "https://github.com/Project-MONAI/monai-deploy-app-sdk/blob/main/docs/source/release_notes/v${version}.md";
+    changelog = "https://github.com/Project-MONAI/monai-deploy-app-sdk/blob/main/docs/source/release_notes/${src.tag}.md";
     license = licenses.asl20;
     maintainers = with maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/moto/default.nix b/pkgs/development/python-modules/moto/default.nix
index 3fe8eaea2371..bf54158febbf 100644
--- a/pkgs/development/python-modules/moto/default.nix
+++ b/pkgs/development/python-modules/moto/default.nix
@@ -10,7 +10,6 @@
   cryptography,
   docker,
   fetchFromGitHub,
-  fetchpatch,
   flask-cors,
   flask,
   freezegun,
@@ -38,7 +37,7 @@
 
 buildPythonPackage rec {
   pname = "moto";
-  version = "5.1.4";
+  version = "5.1.9";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -47,18 +46,9 @@ buildPythonPackage rec {
     owner = "getmoto";
     repo = "moto";
     tag = version;
-    hash = "sha256-bDRd1FTBpv6t2j8cBzcYiK4B0F4sLcoW9K0Wnd0oo+4=";
+    hash = "sha256-UbCSGpvS8Jvpe8iV1rVplSoGykHSup9pVTd3odbPq6Y=";
   };
 
-  # Fix tests with botocore 1.38.32
-  # FIXME: remove in next update
-  patches = [
-    (fetchpatch {
-      url = "https://github.com/getmoto/moto/commit/8dcaaca0eefdf9ac957650c1562317b6d07fadf9.diff";
-      hash = "sha256-5zaerJR1rsMZQLn8cXjS8RYiKlSQ6azp7dk7JzLp+7I=";
-    })
-  ];
-
   build-system = [
     setuptools
   ];
@@ -364,9 +354,6 @@ buildPythonPackage rec {
     # Parameter validation fails
     "test_conditional_write"
 
-    # Requires newer botocore version
-    "test_dynamodb_with_account_id_routing"
-
     # Assumes too much about threading.Timer() behavior (that it honors the
     # timeout precisely and that the thread handler will complete in just 0.1s
     # from the requested timeout)
@@ -395,6 +382,9 @@ buildPythonPackage rec {
 
     # botocore.exceptions.ParamValidationError: Parameter validation failed: Unknown parameter in input: "EnableWorkDocs", must be one of: [...]
     "tests/test_workspaces/test_workspaces.py"
+
+    # Requires sagemaker client
+    "other_langs/tests_sagemaker_client/test_model_training.py"
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/motor/default.nix b/pkgs/development/python-modules/motor/default.nix
index f0d13adab90e..d62180f93e19 100644
--- a/pkgs/development/python-modules/motor/default.nix
+++ b/pkgs/development/python-modules/motor/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "motor";
-  version = "3.7.0";
+  version = "3.7.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mongodb";
     repo = "motor";
     tag = version;
-    hash = "sha256-O3MHVzL/ECO0vnzJItXTDmmMN8aicbvh0Sve/HlAlZw=";
+    hash = "sha256-ul2GKzSiAewwGEuCpQQ61h3cqrJikaJeKs5KlX+aAjo=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/mozjpeg_lossless_optimization/default.nix b/pkgs/development/python-modules/mozjpeg_lossless_optimization/default.nix
index 684d15400c4a..51353639a647 100644
--- a/pkgs/development/python-modules/mozjpeg_lossless_optimization/default.nix
+++ b/pkgs/development/python-modules/mozjpeg_lossless_optimization/default.nix
@@ -12,15 +12,15 @@
 }:
 buildPythonPackage rec {
   pname = "mozjpeg_lossless_optimization";
-  version = "1.3.0";
+  version = "1.3.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "wanadev";
     repo = "mozjpeg-lossless-optimization";
     # https://github.com/NixOS/nixpkgs/issues/26302
-    rev = "refs/tags/v${version}";
-    hash = "sha256-g2+QpV3F7wtu37qRJlA4a5r1J9yuJZcC99fDDy03JqU=";
+    tag = "v${version}";
+    hash = "sha256-HAOmD87oazwlGx1O+tAV5qzSn4EHbzeYQ5e8kmegwbo=";
     fetchSubmodules = true;
   };
 
@@ -46,7 +46,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python library to optimize JPEGs losslessly using MozJPEG";
     homepage = "https://github.com/wanadev/mozjpeg-lossless-optimization";
-    changelog = "https://github.com/wanadev/mozjpeg-lossless-optimization/releases/tag/v${version}";
+    changelog = "https://github.com/wanadev/mozjpeg-lossless-optimization/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = [ lib.maintainers.adfaure ];
   };
diff --git a/pkgs/development/python-modules/mpi4py/default.nix b/pkgs/development/python-modules/mpi4py/default.nix
index bf894a84e568..202ba506dfe1 100644
--- a/pkgs/development/python-modules/mpi4py/default.nix
+++ b/pkgs/development/python-modules/mpi4py/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "mpi4py";
-  version = "4.0.3";
+  version = "4.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     repo = "mpi4py";
     owner = "mpi4py";
     tag = version;
-    hash = "sha256-eN/tjlnNla6RHYOXcprVVqtec1nwCEGn+MBcV/5mHJg=";
+    hash = "sha256-Hm+x79utOrjAbprud2MECgakyOzgShSwNuoyZUcTluQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/mpl-typst/default.nix b/pkgs/development/python-modules/mpl-typst/default.nix
index 040807fde8cd..c2d0d1ffc697 100644
--- a/pkgs/development/python-modules/mpl-typst/default.nix
+++ b/pkgs/development/python-modules/mpl-typst/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "mpl-typst";
-  version = "0.1.0";
+  version = "0.2.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "daskol";
     repo = "mpl-typst";
     tag = "v${version}";
-    hash = "sha256-Pm5z4tkpgwjYtpBh9+AJWlsHl7HNGxyftfaNSwQDpdk=";
+    hash = "sha256-lkO4BTo3duNAsppTjteeBuzgSJL/UnKVW2QXgrfVrqM=";
   };
 
   build-system = [
@@ -46,7 +46,7 @@ buildPythonPackage rec {
   meta = {
     description = "Typst backend for matplotlib";
     homepage = "https://github.com/daskol/mpl-typst";
-    changelog = "https://github.com/daskol/mpl-typst/releases/tag/v${version}";
+    changelog = "https://github.com/daskol/mpl-typst/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ genga898 ];
   };
diff --git a/pkgs/development/python-modules/mplhep/default.nix b/pkgs/development/python-modules/mplhep/default.nix
index c34460357977..36729e8c5285 100644
--- a/pkgs/development/python-modules/mplhep/default.nix
+++ b/pkgs/development/python-modules/mplhep/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "mplhep";
-  version = "0.3.59";
+  version = "0.4.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scikit-hep";
     repo = "mplhep";
     tag = "v${version}";
-    hash = "sha256-Xanj2AkFRq/zu2ntTHVt1QkikN0bYfRcBj6CBho15os=";
+    hash = "sha256-VpdhgFUX1qUiUT5HlA2j3QQv7s3bF671e1I53MsML8w=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/mrsqm/default.nix b/pkgs/development/python-modules/mrsqm/default.nix
index e6828479a5dd..e8a2a0ffea8b 100644
--- a/pkgs/development/python-modules/mrsqm/default.nix
+++ b/pkgs/development/python-modules/mrsqm/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "mrsqm";
-  version = "0.0.7";
+  version = "4";
   pyproject = true;
 
   build-system = [
@@ -28,8 +28,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "mlgig";
     repo = "mrsqm";
-    tag = "v.${version}";
-    hash = "sha256-5K6vCU0HExnmYNThZNDCbEtII9bUGauxDtKkJXe/85Q=";
+    tag = "r${version}";
+    hash = "sha256-59f18zItV3K6tXcg1v1q2Z8HYrQB8T0ntaaqjxeAEbM=";
   };
 
   buildInputs = [ fftw ];
diff --git a/pkgs/development/python-modules/msal/default.nix b/pkgs/development/python-modules/msal/default.nix
index 955c4f97a85b..2d570ab0d594 100644
--- a/pkgs/development/python-modules/msal/default.nix
+++ b/pkgs/development/python-modules/msal/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "msal";
-  version = "1.32.3";
+  version = "1.33.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-XuoDhonHilpwyo7L4SRUWLVahXvQlu+2mJxpuhWYXTU=";
+    hash = "sha256-g2rYD6o+JafXEBXJkM5h9wSocyix5zvLsGI6GMvxdRA=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/msgpack/default.nix b/pkgs/development/python-modules/msgpack/default.nix
index ea30f58d8109..36f886ad7609 100644
--- a/pkgs/development/python-modules/msgpack/default.nix
+++ b/pkgs/development/python-modules/msgpack/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "msgpack";
-  version = "1.1.0";
+  version = "1.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "msgpack";
     repo = "msgpack-python";
     tag = "v${version}";
-    hash = "sha256-yKQcQi0oSJ33gzsx1Q6ME3GbuSaHR091n7maU6F5QlU=";
+    hash = "sha256-j1MpdnfG6tCgAFlza64erMhJm/MkSK2QnixNv7MrQes=";
   };
 
   build-system = [ setuptools ];
@@ -41,7 +41,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "MessagePack serializer implementation";
     homepage = "https://github.com/msgpack/msgpack-python";
-    changelog = "https://github.com/msgpack/msgpack-python/blob/v${version}/ChangeLog.rst";
+    changelog = "https://github.com/msgpack/msgpack-python/blob/${src.tag}/ChangeLog.rst";
     license = licenses.asl20;
     maintainers = with maintainers; [ nickcao ];
   };
diff --git a/pkgs/development/python-modules/msgraph-core/default.nix b/pkgs/development/python-modules/msgraph-core/default.nix
index a684239a6d01..235a8be3a46a 100644
--- a/pkgs/development/python-modules/msgraph-core/default.nix
+++ b/pkgs/development/python-modules/msgraph-core/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "msgraph-core";
-  version = "1.3.4";
+  version = "1.3.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "microsoftgraph";
     repo = "msgraph-sdk-python-core";
     tag = "v${version}";
-    hash = "sha256-F3vZUglO0AvWZPwV8329Wrd5S4PHShBv8Gg3Jvsz6Kk=";
+    hash = "sha256-0ey8sV0JDuOjdrOeO/hRxZ847DMcWai0B/YUWZ1VJ48=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/multidict/default.nix b/pkgs/development/python-modules/multidict/default.nix
index 7f731d7bb8c7..75f50f00d240 100644
--- a/pkgs/development/python-modules/multidict/default.nix
+++ b/pkgs/development/python-modules/multidict/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "multidict";
-  version = "6.4.4";
+  version = "6.6.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "aio-libs";
     repo = "multidict";
     tag = "v${version}";
-    hash = "sha256-crnWaThjymY0nbY4yvD+wX20vQcBkPrFAI+UkexNAbo=";
+    hash = "sha256-AB35kVgKizzPi3r4tDVQ7vI50Xsb2BeBp3rFh+UOXQc=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/multipart/default.nix b/pkgs/development/python-modules/multipart/default.nix
index 587c2e3aa109..4eb143a42c57 100644
--- a/pkgs/development/python-modules/multipart/default.nix
+++ b/pkgs/development/python-modules/multipart/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "multipart";
-  version = "1.2.1";
+  version = "1.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "defnull";
     repo = "multipart";
     tag = "v${version}";
-    hash = "sha256-mQMv5atWrWpwyY9YYjaRYNDm5AfW54drPSKL7qiae+I=";
+    hash = "sha256-6vlyoi4nayZOKyfO4jbKNzUy7G6K7mySYzkqfp+45O4=";
   };
 
   build-system = [ flit-core ];
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "multipart" ];
 
   meta = {
-    changelog = "https://github.com/defnull/multipart/blob/${src.rev}/CHANGELOG.rst";
+    changelog = "https://github.com/defnull/multipart/blob/${src.tag}/CHANGELOG.rst";
     description = "Parser for multipart/form-data";
     homepage = "https://github.com/defnull/multipart";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/mwparserfromhell/default.nix b/pkgs/development/python-modules/mwparserfromhell/default.nix
index 55d9c63c640d..b4f5e86efcbe 100644
--- a/pkgs/development/python-modules/mwparserfromhell/default.nix
+++ b/pkgs/development/python-modules/mwparserfromhell/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "mwparserfromhell";
-  version = "0.6.6";
+  version = "0.7.2";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ca/sHpeEulduldbzSEVYLTxzOjpSuncN2KnDpA5bZJ8=";
+    hash = "sha256-9Bkwcunqk7noj3cvYKAhJcBgLTKJDQu9yyde1YyLN2M=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/myst-nb/default.nix b/pkgs/development/python-modules/myst-nb/default.nix
index f12ee7e8c1b7..cba8ec711379 100644
--- a/pkgs/development/python-modules/myst-nb/default.nix
+++ b/pkgs/development/python-modules/myst-nb/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "myst-nb";
-  version = "1.2.0";
+  version = "1.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "myst_nb";
-    hash = "sha256-r0Wex1OzQZUhgrRbCoC0d2zr+Aye5qrKKj9AJ7RAyd4=";
+    hash = "sha256-3zzUaA9Rpa9nP9RrOLVivjVZrvFHXpBu0PLmbkWHzks=";
   };
 
   nativeBuildInputs = [ flit-core ];
diff --git a/pkgs/development/python-modules/nanoeigenpy/default.nix b/pkgs/development/python-modules/nanoeigenpy/default.nix
index 9e1f0378dc3f..29bb740b4aaa 100644
--- a/pkgs/development/python-modules/nanoeigenpy/default.nix
+++ b/pkgs/development/python-modules/nanoeigenpy/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "nanoeigenpy";
-  version = "0.3.0";
+  version = "0.4.0";
   pyproject = false; # Built with cmake
 
   src = fetchFromGitHub {
     owner = "Simple-Robotics";
     repo = "nanoeigenpy";
     tag = "v${version}";
-    hash = "sha256-asDe1mrTsAxVl0gAo7zlWqQRfWYBiSLqQk1d8bEBsn4=";
+    hash = "sha256-2Lp3fYw3rQYxjkCQCeHI+N32Y4vTJ8l+PoKqLCmAXIU=";
   };
 
   # Fix:
diff --git a/pkgs/development/python-modules/napari-npe2/default.nix b/pkgs/development/python-modules/napari-npe2/default.nix
index e9a9beeed4cd..02a0a99047e3 100644
--- a/pkgs/development/python-modules/napari-npe2/default.nix
+++ b/pkgs/development/python-modules/napari-npe2/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "napari-npe2";
-  version = "0.7.8";
+  version = "0.7.9";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "napari";
     repo = "npe2";
     tag = "v${version}";
-    hash = "sha256-J15CmJ1L173M54fCo4oTV9XP7946c0aHzLqKjTvzG0g=";
+    hash = "sha256-q+vgzUuSSHFR64OajT/j/tLsNgSm3azQPCvDlrIvceM=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/napari/default.nix b/pkgs/development/python-modules/napari/default.nix
index 3d49194633e6..48f842bc15a6 100644
--- a/pkgs/development/python-modules/napari/default.nix
+++ b/pkgs/development/python-modules/napari/default.nix
@@ -45,14 +45,14 @@
 
 mkDerivationWith buildPythonPackage rec {
   pname = "napari";
-  version = "0.6.2";
+  version = "0.6.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "napari";
     repo = "napari";
     tag = "v${version}";
-    hash = "sha256-p6deNHnlvgZXV3Ym3OADC44j5bOkMDjlmM2N3yE5GxE=";
+    hash = "sha256-OPbjq9jXA5onLBCVvCx4g935y7GNvf4GA5s5sfNjIKY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/narwhals/default.nix b/pkgs/development/python-modules/narwhals/default.nix
index 35d4ac513145..71e531679c3e 100644
--- a/pkgs/development/python-modules/narwhals/default.nix
+++ b/pkgs/development/python-modules/narwhals/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "narwhals";
-  version = "1.40.0";
+  version = "2.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "narwhals-dev";
     repo = "narwhals";
     tag = "v${version}";
-    hash = "sha256-cCgWKH4DzENTI1vwxOU+GRp/poUe55XqSPY8UHYy9PI=";
+    hash = "sha256-NptQHnv0PoAbD0RIghBrtDPsYidq1k4LN/mUfz4n6G0=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/nbdev/default.nix b/pkgs/development/python-modules/nbdev/default.nix
index d14141e18966..6a582a67d6c8 100644
--- a/pkgs/development/python-modules/nbdev/default.nix
+++ b/pkgs/development/python-modules/nbdev/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "nbdev";
-  version = "2.4.2";
+  version = "2.4.5";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-OtCpN2Jw4ghv19jY4N2Yn46CxxZuPQSybFw62MIIf0g=";
+    hash = "sha256-Evp67exwUVu7Dv3z85AAeTVB4CCcBHzRFXYcq+KEpj0=";
   };
 
   pythonRelaxDeps = [ "ipywidgets" ];
diff --git a/pkgs/development/python-modules/nbformat/default.nix b/pkgs/development/python-modules/nbformat/default.nix
index 7c31e3e4acc7..2274c41496dd 100644
--- a/pkgs/development/python-modules/nbformat/default.nix
+++ b/pkgs/development/python-modules/nbformat/default.nix
@@ -46,13 +46,7 @@ buildPythonPackage rec {
     testpath
   ];
 
-  disabledTestPaths = lib.optionals (pythonAtLeast "3.13") [
-    # ResourceWarning: unclosed database in <sqlite3.Connection object at 0x7ffff54954e0>
-    "tests/test_validator.py"
-    "tests/v4/test_convert.py"
-    "tests/v4/test_json.py"
-    "tests/v4/test_validate.py"
-  ];
+  pytestFlags = [ "-Wignore::pytest.PytestUnraisableExceptionWarning" ];
 
   # Some of the tests use localhost networking.
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/development/python-modules/ndindex/default.nix b/pkgs/development/python-modules/ndindex/default.nix
index 54edcb1b2e4c..c4eef602132b 100644
--- a/pkgs/development/python-modules/ndindex/default.nix
+++ b/pkgs/development/python-modules/ndindex/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "ndindex";
-  version = "1.9.2";
+  version = "1.10.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Quansight-Labs";
     repo = "ndindex";
     tag = version;
-    hash = "sha256-5S4HN5MFLgURImwFsyyTOxDhrZJ5Oe+Ln/TA/bsCsek=";
+    hash = "sha256-gPhRln7cUoRmypuTDTwoz4LyCBX3EwuKes/SEoz9NYM=";
   };
 
   build-system = [
@@ -76,7 +76,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python library for manipulating indices of ndarrays";
     homepage = "https://github.com/Quansight-Labs/ndindex";
-    changelog = "https://github.com/Quansight-Labs/ndindex/releases/tag/${version}";
+    changelog = "https://github.com/Quansight-Labs/ndindex/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/neo4j/default.nix b/pkgs/development/python-modules/neo4j/default.nix
index 7a9110fdd9c5..36d64c317dd0 100644
--- a/pkgs/development/python-modules/neo4j/default.nix
+++ b/pkgs/development/python-modules/neo4j/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "neo4j";
-  version = "5.28.1";
+  version = "5.28.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "neo4j";
     repo = "neo4j-python-driver";
     tag = version;
-    hash = "sha256-6Qa6llM8ke9dOkZ7q057ruM0h7pByxAQ+I6Mus2ExVA=";
+    hash = "sha256-dQvQO+Re+ki9w+itzE6/WdiiLdMlU4yePt01vAPe4+M=";
   };
 
   postPatch = ''
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Neo4j Bolt Driver for Python";
     homepage = "https://github.com/neo4j/neo4j-python-driver";
-    changelog = "https://github.com/neo4j/neo4j-python-driver/releases/tag/${version}";
+    changelog = "https://github.com/neo4j/neo4j-python-driver/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/neoteroi-mkdocs/default.nix b/pkgs/development/python-modules/neoteroi-mkdocs/default.nix
index cc7fd7dc4542..bec4a6bad974 100644
--- a/pkgs/development/python-modules/neoteroi-mkdocs/default.nix
+++ b/pkgs/development/python-modules/neoteroi-mkdocs/default.nix
@@ -16,14 +16,14 @@
 }:
 buildPythonPackage rec {
   pname = "neoteroi-mkdocs";
-  version = "1.1.2";
+  version = "1.1.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Neoteroi";
     repo = "mkdocs-plugins";
     tag = "v${version}";
-    hash = "sha256-+bH4pkY+BE31t3b750ZAbbesKLFjgx6KF9b2tXFTmhI=";
+    hash = "sha256-4Rd4VhgaMzoSZ87FMQsUxadGG1ucQgGY0Y4uZoZl380=";
   };
 
   buildInputs = [ hatchling ];
diff --git a/pkgs/development/python-modules/nethsm/default.nix b/pkgs/development/python-modules/nethsm/default.nix
index 32db3764b628..426e93f4bba6 100644
--- a/pkgs/development/python-modules/nethsm/default.nix
+++ b/pkgs/development/python-modules/nethsm/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "nethsm";
-  version = "1.4.0";
+  version = "1.4.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Nitrokey";
     repo = "nethsm-sdk-py";
     tag = "v${version}";
-    hash = "sha256-cbBYElR2J35ZHW5zvL9jlMg9KSerqjFBLsg5QdmqAoA=";
+    hash = "sha256-guW3KKIrRKSw8TsvPMTPJUyzISBNUoBqsGBWuv7Nf7M=";
   };
 
   pythonRelaxDeps = true;
diff --git a/pkgs/development/python-modules/netmiko/default.nix b/pkgs/development/python-modules/netmiko/default.nix
index cf9a77afe338..659151015602 100644
--- a/pkgs/development/python-modules/netmiko/default.nix
+++ b/pkgs/development/python-modules/netmiko/default.nix
@@ -6,7 +6,6 @@
   paramiko,
   poetry-core,
   pyserial,
-  pythonOlder,
   pyyaml,
   rich,
   ruamel-yaml,
@@ -16,22 +15,14 @@
 
 buildPythonPackage rec {
   pname = "netmiko";
-  version = "4.5.0";
+  version = "4.6.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-29/CC2yq+OXXpXC7G0Kia5pvjYI06R9cZfTb/gwOT1A=";
+    hash = "sha256-lwG7LBoV6y6AdMsuKMoAfGm5+lKWG4O5jHV+rWuA3u8=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace-fail "poetry>=1.6.1" "poetry-core" \
-      --replace-fail "poetry.masonry.api" "poetry.core.masonry.api"
-  '';
-
   build-system = [ poetry-core ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/nettigo-air-monitor/default.nix b/pkgs/development/python-modules/nettigo-air-monitor/default.nix
index ce41c43032bc..3a68b5330ef3 100644
--- a/pkgs/development/python-modules/nettigo-air-monitor/default.nix
+++ b/pkgs/development/python-modules/nettigo-air-monitor/default.nix
@@ -29,6 +29,11 @@ buildPythonPackage rec {
     hash = "sha256-Lgtq+Jho2IkXnVLVlPRxL2hvhB8gW/9Et2yqXOkM8MI=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail 'version = "0.0.0"' 'version = "${version}"'
+  '';
+
   build-system = [ setuptools ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/netutils/default.nix b/pkgs/development/python-modules/netutils/default.nix
index eabb25dd11b5..3f4d14d6294c 100644
--- a/pkgs/development/python-modules/netutils/default.nix
+++ b/pkgs/development/python-modules/netutils/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "netutils";
-  version = "1.13.0";
+  version = "1.14.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "networktocode";
     repo = "netutils";
     tag = "v${version}";
-    hash = "sha256-lUtxTzL3nkdICvTKozdnyx1wtwE4xwY7mcUqv3Wgw3Y=";
+    hash = "sha256-w+31rv/0EgAT8gv/Oqlbq/djbHIgK3YF792sxBDXHEQ=";
   };
 
   build-system = [ poetry-core ];
@@ -62,7 +62,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Library that is a collection of objects for common network automation tasks";
     homepage = "https://github.com/networktocode/netutils";
-    changelog = "https://github.com/networktocode/netutils/releases/tag/v${version}";
+    changelog = "https://github.com/networktocode/netutils/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/networkx/default.nix b/pkgs/development/python-modules/networkx/default.nix
index 91ff6b59b531..089c28778475 100644
--- a/pkgs/development/python-modules/networkx/default.nix
+++ b/pkgs/development/python-modules/networkx/default.nix
@@ -29,14 +29,14 @@
 buildPythonPackage rec {
   pname = "networkx";
   # upgrade may break sage, please test the sage build or ping @timokau on upgrade
-  version = "3.4.2";
+  version = "3.5";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-MHw2aUKMU2KqsnyKEmCqj0fE6R04kfSL4BQXONjQU+E=";
+    hash = "sha256-1Mb5z4H1LWkjCGZ5a4KvvM3sPbeuT70bZep1D+7VADc=";
   };
 
   # backport patch to fix tests with Python 3.13.4
diff --git a/pkgs/development/python-modules/neurokit2/default.nix b/pkgs/development/python-modules/neurokit2/default.nix
index 923eaa7b7e42..9e2f9acbee32 100644
--- a/pkgs/development/python-modules/neurokit2/default.nix
+++ b/pkgs/development/python-modules/neurokit2/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "neurokit2";
-  version = "0.2.10";
+  version = "0.2.12";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "neuropsychology";
     repo = "NeuroKit";
     tag = "v${version}";
-    hash = "sha256-e/B1JvO6uYZ6iVskFvxZLSSXi0cPep9bBZ0JXZTVS28=";
+    hash = "sha256-gn02l0vYl+/7hXp4gFVlgblxC4dewXckW3JL3wPC89Y=";
   };
 
   postPatch = ''
@@ -104,7 +104,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python Toolbox for Neurophysiological Signal Processing";
     homepage = "https://github.com/neuropsychology/NeuroKit";
-    changelog = "https://github.com/neuropsychology/NeuroKit/releases/tag/v${version}";
+    changelog = "https://github.com/neuropsychology/NeuroKit/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ genga898 ];
   };
diff --git a/pkgs/development/python-modules/niaarm/default.nix b/pkgs/development/python-modules/niaarm/default.nix
index c0979f4c7a4f..a324761df895 100644
--- a/pkgs/development/python-modules/niaarm/default.nix
+++ b/pkgs/development/python-modules/niaarm/default.nix
@@ -24,14 +24,14 @@
 buildPythonPackage rec {
   pname = "niaarm";
   # nixpkgs-update: no auto update
-  version = "0.4.2";
+  version = "0.13.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "firefly-cpp";
     repo = "NiaARM";
     tag = version;
-    hash = "sha256-WvVXL1a1DvgLF3upbGUi1+nH5aDBUNx5Bitlkb8lQkc=";
+    hash = "sha256-524rJ5b9e0U1rqu1iCGMA3Tgnn9bO4biCC1FMoGNqms=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/nidaqmx/default.nix b/pkgs/development/python-modules/nidaqmx/default.nix
index 76b93355d968..8beeb417972f 100644
--- a/pkgs/development/python-modules/nidaqmx/default.nix
+++ b/pkgs/development/python-modules/nidaqmx/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "nidaqmx";
-  version = "1.1.0";
+  version = "1.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ni";
     repo = "nidaqmx-python";
     tag = version;
-    hash = "sha256-WNr+zVrA4X2AjizsmMEau54Vv1Svey3LNsCo8Bm/W+A=";
+    hash = "sha256-uxf+1nmJ+YFS3zGu+0YP4zOdBlSCHPYC8euqZIGwb00=";
   };
 
   disabled = pythonOlder "3.8";
diff --git a/pkgs/development/python-modules/nikola/default.nix b/pkgs/development/python-modules/nikola/default.nix
index e4a490760249..570f03feec97 100644
--- a/pkgs/development/python-modules/nikola/default.nix
+++ b/pkgs/development/python-modules/nikola/default.nix
@@ -44,7 +44,7 @@
 
 buildPythonPackage rec {
   pname = "nikola";
-  version = "8.3.1";
+  version = "8.3.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -52,7 +52,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "Nikola";
     inherit version;
-    hash = "sha256-IfJB2Rl3c1MyEiuyNpT3udfpM480VvFD8zosJFDHr7k=";
+    hash = "sha256-Y219b/wqsk9MJknoaV+LtWBOMJFT6ktgt4b6yuA6scc=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/nilearn/default.nix b/pkgs/development/python-modules/nilearn/default.nix
index d9da5fcf52d6..95709d26c281 100644
--- a/pkgs/development/python-modules/nilearn/default.nix
+++ b/pkgs/development/python-modules/nilearn/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "nilearn";
-  version = "0.11.1";
+  version = "0.12.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nilearn";
     repo = "nilearn";
     tag = version;
-    hash = "sha256-ZvodSRJkKwPwpYHOLmxAYIIv7f9AlrjmZS9KLPjz5rM=";
+    hash = "sha256-olA3Yqf+upMJZiwpQp6HDSMxe9OssGLGMdHbZARg0+Y=";
   };
 
   postPatch = ''
@@ -71,7 +71,7 @@ buildPythonPackage rec {
   meta = {
     description = "Module for statistical learning on neuroimaging data";
     homepage = "https://nilearn.github.io";
-    changelog = "https://github.com/nilearn/nilearn/releases/tag/${version}";
+    changelog = "https://github.com/nilearn/nilearn/releases/tag/${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/nitrokey/default.nix b/pkgs/development/python-modules/nitrokey/default.nix
index 8258a73e57bd..158925460e5c 100644
--- a/pkgs/development/python-modules/nitrokey/default.nix
+++ b/pkgs/development/python-modules/nitrokey/default.nix
@@ -17,12 +17,12 @@
 
 buildPythonPackage rec {
   pname = "nitrokey";
-  version = "0.3.2";
+  version = "0.4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-JAgorA2V+WHgqtwk8fEPjdwoog7Q3xk93aKSJ0mxHkQ=";
+    hash = "sha256-uZ3KF+8PUwVjwf73buFpq/6Fu+fqkfIecP3A33FmtKk=";
   };
 
   disabled = pythonOlder "3.9";
diff --git a/pkgs/development/python-modules/niworkflows/default.nix b/pkgs/development/python-modules/niworkflows/default.nix
index a91d07cf99a3..784be8a25b90 100644
--- a/pkgs/development/python-modules/niworkflows/default.nix
+++ b/pkgs/development/python-modules/niworkflows/default.nix
@@ -40,14 +40,14 @@
 
 buildPythonPackage rec {
   pname = "niworkflows";
-  version = "1.12.2";
+  version = "1.13.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nipreps";
     repo = "niworkflows";
     tag = version;
-    hash = "sha256-rgnfp12SHlL3LFFMSrHlTd0tWNnA4ekxZ9kKYRvZWlw=";
+    hash = "sha256-Q43IXlzmCO7m9y/tRlJJ2Dz4wNeK+kXtLLLrthO+n58=";
   };
 
   pythonRelaxDeps = [ "traits" ];
diff --git a/pkgs/development/python-modules/nixpkgs-updaters-library/default.nix b/pkgs/development/python-modules/nixpkgs-updaters-library/default.nix
index 30ef74dbe66e..661dd2d8721a 100644
--- a/pkgs/development/python-modules/nixpkgs-updaters-library/default.nix
+++ b/pkgs/development/python-modules/nixpkgs-updaters-library/default.nix
@@ -74,7 +74,7 @@ buildPythonPackage rec {
   meta = {
     description = "Boilerplate-less updater library for Nixpkgs ecosystems";
     homepage = "https://github.com/PerchunPak/nixpkgs-updaters-library";
-    changelog = "https://github.com/PerchunPak/nixpkgs-updaters-library/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/PerchunPak/nixpkgs-updaters-library/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ perchun ];
   };
diff --git a/pkgs/development/python-modules/nocasedict/default.nix b/pkgs/development/python-modules/nocasedict/default.nix
index f50c1df9902f..4397658c0bf4 100644
--- a/pkgs/development/python-modules/nocasedict/default.nix
+++ b/pkgs/development/python-modules/nocasedict/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "nocasedict";
-  version = "2.0.4";
+  version = "2.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-TKk09l31exDQ/KtfDDnp3MuTV3/58ivvmCZd2/EvivE=";
+    hash = "sha256-tWPVhRy7DgsQ+7YYm6h+BhLSLlpvOgBKRXOrWziqqn0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/nocaselist/default.nix b/pkgs/development/python-modules/nocaselist/default.nix
index ddb10ecf6fdc..c76216939c54 100644
--- a/pkgs/development/python-modules/nocaselist/default.nix
+++ b/pkgs/development/python-modules/nocaselist/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "nocaselist";
-  version = "2.0.3";
+  version = "2.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-VXFNqEM/tIQ855dASXfkOF1ePfnkqgD33emD/YdBD+8=";
+    hash = "sha256-+3MG9aPgRVNOc3q37L7uA5ul6br7xbXyMfYW1+khG2U=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/nominal-api-protos/default.nix b/pkgs/development/python-modules/nominal-api-protos/default.nix
index 2e080e4ff2c3..0c39ac7fd383 100644
--- a/pkgs/development/python-modules/nominal-api-protos/default.nix
+++ b/pkgs/development/python-modules/nominal-api-protos/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "nominal-api-protos";
-  version = "0.708.0";
+  version = "0.806.0";
   pyproject = true;
 
   # nixpkgs-update: no auto update
   src = fetchPypi {
     inherit version;
     pname = "nominal_api_protos";
-    hash = "sha256-EYyBRmmCq4OA6xgf4JpajUtlJClkxxPn48Wmmy2mqN4=";
+    hash = "sha256-wbMGgW3YYX+MVc525rH6pOk72H7NlmiyEJiFtz+Osoo=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/nominal-api/default.nix b/pkgs/development/python-modules/nominal-api/default.nix
index 0554264d1f3f..fb5a51f4cfa1 100644
--- a/pkgs/development/python-modules/nominal-api/default.nix
+++ b/pkgs/development/python-modules/nominal-api/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "nominal-api";
-  version = "0.708.0";
+  version = "0.806.0";
   pyproject = true;
 
   # nixpkgs-update: no auto update
   src = fetchPypi {
     inherit version;
     pname = "nominal_api";
-    hash = "sha256-gaMQ4bLhdBkDTUoHP5Cb0vS5emNcYga5eTvV2TEWQiU=";
+    hash = "sha256-V9zncQFNBi3MtgBHmwY4SoSgI9cjQuBt90PeRHjaXsw=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/nominal/default.nix b/pkgs/development/python-modules/nominal/default.nix
index 75233a1421d5..c4183dfa4107 100644
--- a/pkgs/development/python-modules/nominal/default.nix
+++ b/pkgs/development/python-modules/nominal/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "nominal";
-  version = "1.66.0";
+  version = "1.71.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nominal-io";
     repo = "nominal-client";
     tag = "v${version}";
-    hash = "sha256-xRt8xRMjjQQ+2IujW//F6Z3xaPz4+YuV0AP4Km8mc04=";
+    hash = "sha256-C0afrzWlq2Z3a21MIJ/3XgvjkEZONwBgCZ+06XIYFGE=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/notebook/default.nix b/pkgs/development/python-modules/notebook/default.nix
index b25773185de5..2235147911ae 100644
--- a/pkgs/development/python-modules/notebook/default.nix
+++ b/pkgs/development/python-modules/notebook/default.nix
@@ -27,14 +27,14 @@
 
 buildPythonPackage rec {
   pname = "notebook";
-  version = "7.4.3";
+  version = "7.4.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jupyter";
     repo = "notebook";
     tag = "v${version}";
-    hash = "sha256-DpGWBV5MeCvoGSBadObVEaYwA5kRmHj8NdVWpJ+pHjA=";
+    hash = "sha256-bj4iQvm0TGBiCu9drJ8QFXsedzm/cEjevNQS6UsasNs=";
   };
 
   postPatch = ''
@@ -54,7 +54,7 @@ buildPythonPackage rec {
 
   offlineCache = yarn-berry_3.fetchYarnBerryDeps {
     inherit src missingHashes;
-    hash = "sha256-S0lnRJ+9F1RhymlAOxo3sEJJrHYo5IWeWn80obcgVlM=";
+    hash = "sha256-nRaWzr5Q904KojfK0mPgLX9be82axb8Aab0SJULE7RU=";
   };
 
   build-system = [
@@ -88,7 +88,7 @@ buildPythonPackage rec {
   __darwinAllowLocalNetworking = true;
 
   meta = {
-    changelog = "https://github.com/jupyter/notebook/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/jupyter/notebook/blob/${src.tag}/CHANGELOG.md";
     description = "Web-based notebook environment for interactive computing";
     homepage = "https://github.com/jupyter/notebook";
     license = lib.licenses.bsd3;
diff --git a/pkgs/development/python-modules/nox/default.nix b/pkgs/development/python-modules/nox/default.nix
index 91e23202c525..f419359780c6 100644
--- a/pkgs/development/python-modules/nox/default.nix
+++ b/pkgs/development/python-modules/nox/default.nix
@@ -1,8 +1,10 @@
 {
   lib,
   argcomplete,
+  attrs,
   buildPythonPackage,
   colorlog,
+  dependency-groups,
   fetchFromGitHub,
   hatchling,
   jinja2,
@@ -17,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "nox";
-  version = "2024.10.09";
+  version = "2025.05.01";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -26,19 +28,16 @@ buildPythonPackage rec {
     owner = "wntrblm";
     repo = "nox";
     tag = version;
-    hash = "sha256-GdNz34A8IKwPG/270sY5t3SoggGCZMWfDq/Wyhk0ez8=";
+    hash = "sha256-qH8oh7tmiJkXOobyDZMRZ62w2sRHJF8sh4PX+6s7M70=";
   };
 
-  patches = [
-    # Backport of https://github.com/wntrblm/nox/pull/903, which can be removed on next release
-    ./fix-broken-mock-on-cpython-3.12.8.patch
-  ];
-
   build-system = [ hatchling ];
 
   dependencies = [
     argcomplete
+    attrs
     colorlog
+    dependency-groups
     packaging
     virtualenv
   ]
@@ -67,6 +66,9 @@ buildPythonPackage rec {
     "test__create_venv_options"
     # Assertion errors
     "test_uv"
+    # calls to naked python
+    "test_noxfile_script_mode"
+    "test_noxfile_script_mode_url_req"
   ];
 
   disabledTestPaths = [
@@ -77,7 +79,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Flexible test automation for Python";
     homepage = "https://nox.thea.codes/";
-    changelog = "https://github.com/wntrblm/nox/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/wntrblm/nox/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [
       doronbehar
diff --git a/pkgs/development/python-modules/nox/fix-broken-mock-on-cpython-3.12.8.patch b/pkgs/development/python-modules/nox/fix-broken-mock-on-cpython-3.12.8.patch
deleted file mode 100644
index f634c3534b93..000000000000
--- a/pkgs/development/python-modules/nox/fix-broken-mock-on-cpython-3.12.8.patch
+++ /dev/null
@@ -1,35 +0,0 @@
-diff --git a/nox/command.py b/nox/command.py
-index 671875c..4984168 100644
---- a/nox/command.py
-+++ b/nox/command.py
-@@ -30,6 +30,8 @@ TYPE_CHECKING = False
- if TYPE_CHECKING:
-     from typing import IO
- 
-+_PLATFORM = sys.platform
-+
- ExternalType = Literal["error", True, False]
- 
- 
-@@ -63,7 +65,7 @@ def _clean_env(env: Mapping[str, str | None] | None = None) -> dict[str, str] |
-     clean_env = {k: v for k, v in env.items() if v is not None}
- 
-     # Ensure systemroot is passed down, otherwise Windows will explode.
--    if sys.platform == "win32":
-+    if _PLATFORM.startswith("win"):
-         clean_env.setdefault("SYSTEMROOT", os.environ.get("SYSTEMROOT", ""))
- 
-     return clean_env
-diff --git a/tests/test_command.py b/tests/test_command.py
-index ae398e9..904cf34 100644
---- a/tests/test_command.py
-+++ b/tests/test_command.py
-@@ -157,7 +157,7 @@ def test_run_env_remove(monkeypatch):
-     )
- 
- 
--@mock.patch("sys.platform", "win32")
-+@mock.patch("nox.command._PLATFORM", "win32")
- def test_run_env_systemroot():
-     systemroot = os.environ.setdefault("SYSTEMROOT", "sigil")
- 
diff --git a/pkgs/development/python-modules/nskeyedunarchiver/default.nix b/pkgs/development/python-modules/nskeyedunarchiver/default.nix
index 1141248f8457..c63b8793fb3f 100644
--- a/pkgs/development/python-modules/nskeyedunarchiver/default.nix
+++ b/pkgs/development/python-modules/nskeyedunarchiver/default.nix
@@ -7,13 +7,12 @@
 
 buildPythonPackage rec {
   pname = "nskeyedunarchiver";
-  version = "1.5";
+  version = "1.5.2";
   pyproject = true;
 
   src = fetchPypi {
-    inherit version;
-    pname = "NSKeyedUnArchiver";
-    hash = "sha256-7toEgAIYFzNuD/6sqAN3wajwjsxfwGvkg7SMRLrUFPQ=";
+    inherit pname version;
+    hash = "sha256-2aLV1I6p4seNMb+/xKl8AnlBkvO0VINC1yfVS90gvro=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/numcodecs/default.nix b/pkgs/development/python-modules/numcodecs/default.nix
index 4cb141e8fb34..ae55cda810bf 100644
--- a/pkgs/development/python-modules/numcodecs/default.nix
+++ b/pkgs/development/python-modules/numcodecs/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "numcodecs";
-  version = "0.15.1";
+  version = "0.16.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-7u135NZjZkGizGBfvGB4x6jyzEDz36Kz9h5S5gkbBP8=";
+    hash = "sha256-xH8g1lZFRWjGtGl84CCB5ru1EvGYc4xqVvr+gCnJf7E=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/nvdlib/default.nix b/pkgs/development/python-modules/nvdlib/default.nix
index f9c669ca73d8..b775e05126e6 100644
--- a/pkgs/development/python-modules/nvdlib/default.nix
+++ b/pkgs/development/python-modules/nvdlib/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "nvdlib";
-  version = "0.8.0";
+  version = "0.8.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "Vehemont";
     repo = "nvdlib";
     tag = "v${version}";
-    hash = "sha256-fj7tgTv3r++oo+45QFQy/rmXYdKyKhR74maHOdp+0yA=";
+    hash = "sha256-8Tg9JN63+zGRUppIXBQ46mKeDq+nLNQvAjtCwcTuC1g=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/oauthlib/default.nix b/pkgs/development/python-modules/oauthlib/default.nix
index 9fd14254fd49..c34c9ccfc667 100644
--- a/pkgs/development/python-modules/oauthlib/default.nix
+++ b/pkgs/development/python-modules/oauthlib/default.nix
@@ -7,8 +7,6 @@
   mock,
   pyjwt,
   pytestCheckHook,
-  pythonAtLeast,
-  pythonOlder,
   setuptools,
 
   # for passthru.tests
@@ -20,16 +18,14 @@
 
 buildPythonPackage rec {
   pname = "oauthlib";
-  version = "3.2.2";
+  version = "3.3.1";
   pyproject = true;
 
-  disabled = pythonOlder "3.7";
-
   src = fetchFromGitHub {
     owner = "oauthlib";
     repo = "oauthlib";
-    rev = "v${version}";
-    hash = "sha256-KADS1pEaLYi86LEt2VVuz8FVTBANzxC8EeQLgGMxuBU=";
+    tag = "v${version}";
+    hash = "sha256-ZTmR+pTNQaRQMnUA+8hXM5VACRd8Hn62KTNooy5FQyk=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -50,11 +46,8 @@ buildPythonPackage rec {
   ++ lib.flatten (lib.attrValues optional-dependencies);
 
   disabledTests = [
-    # https://github.com/oauthlib/oauthlib/issues/877
-    "test_rsa_bad_keys"
-  ]
-  ++ lib.optionals (pythonAtLeast "3.13") [
-    "test_filter_params"
+    # too narrow time comparison issues
+    "test_fetch_access_token"
   ];
 
   pythonImportsCheck = [ "oauthlib" ];
@@ -69,7 +62,7 @@ buildPythonPackage rec {
   };
 
   meta = with lib; {
-    changelog = "https://github.com/oauthlib/oauthlib/blob/${src.rev}/CHANGELOG.rst";
+    changelog = "https://github.com/oauthlib/oauthlib/blob/${src.tag}/CHANGELOG.rst";
     description = "Generic, spec-compliant, thorough implementation of the OAuth request-signing logic";
     homepage = "https://github.com/oauthlib/oauthlib";
     license = licenses.bsd3;
diff --git a/pkgs/development/python-modules/odc-stac/default.nix b/pkgs/development/python-modules/odc-stac/default.nix
index d077e9c37db5..00ec04b1f674 100644
--- a/pkgs/development/python-modules/odc-stac/default.nix
+++ b/pkgs/development/python-modules/odc-stac/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "odc-stac";
-  version = "0.4.0rc2";
+  version = "0.4.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "opendatacube";
     repo = "odc-stac";
     tag = "v${version}";
-    hash = "sha256-I25qAJEryYaYO7KIVIoTlgzLS6PWkNG6b4NFyhghyKQ=";
+    hash = "sha256-Ekyavcin13B4DAxv0/XG5QTBuLE7PRospAXe40fHeX0=";
   };
 
   build-system = [
@@ -88,7 +88,7 @@ buildPythonPackage rec {
   meta = {
     description = "Load STAC items into xarray Datasets";
     homepage = "https://github.com/opendatacube/odc-stac/";
-    changelog = "https://github.com/opendatacube/odc-stac/tag/v${version}";
+    changelog = "https://github.com/opendatacube/odc-stac/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ daspk04 ];
   };
diff --git a/pkgs/development/python-modules/oelint-data/default.nix b/pkgs/development/python-modules/oelint-data/default.nix
index 9ef22aaebe2b..12aed15167c0 100644
--- a/pkgs/development/python-modules/oelint-data/default.nix
+++ b/pkgs/development/python-modules/oelint-data/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "oelint-data";
-  version = "1.0.24";
+  version = "1.0.25";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "priv-kweihmann";
     repo = "oelint-data";
     tag = version;
-    hash = "sha256-vKXRlqpFxdmq+UOGCm59LVwjLW8h1N/fQr4kx1eW8ys=";
+    hash = "sha256-obX8grYYSa9H/UoSBQon44Of4Eh4BtqJrfwZbaqh6IU=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/okonomiyaki/default.nix b/pkgs/development/python-modules/okonomiyaki/default.nix
index 5f57b9968304..812379dda907 100644
--- a/pkgs/development/python-modules/okonomiyaki/default.nix
+++ b/pkgs/development/python-modules/okonomiyaki/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "okonomiyaki";
-  version = "2.0.0";
+  version = "3.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "enthought";
     repo = "okonomiyaki";
     tag = version;
-    hash = "sha256-JQZhw0H4iSdxoyS6ODICJz1vAZsOISQitX7wTgSS1xc=";
+    hash = "sha256-xAF9Tdr+IM3lU+mcNcAWATJLZOVvbx0llqznqHLVqDc=";
   };
 
   postPatch = ''
@@ -79,7 +79,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Experimental library aimed at consolidating a lot of low-level code used for Enthought's eggs";
     homepage = "https://github.com/enthought/okonomiyaki";
-    changelog = "https://github.com/enthought/okonomiyaki/releases/tag/${version}";
+    changelog = "https://github.com/enthought/okonomiyaki/releases/tag/${src.tag}";
     maintainers = with maintainers; [ genericnerdyusername ];
     license = licenses.bsd3;
   };
diff --git a/pkgs/development/python-modules/omegaconf/default.nix b/pkgs/development/python-modules/omegaconf/default.nix
index c21ee73c3e05..c55f1b4ccd1e 100644
--- a/pkgs/development/python-modules/omegaconf/default.nix
+++ b/pkgs/development/python-modules/omegaconf/default.nix
@@ -9,7 +9,7 @@
   jre_minimal,
   pydevd,
   pytest-mock,
-  pytestCheckHook,
+  pytest7CheckHook,
   pythonAtLeast,
   pythonOlder,
   pyyaml,
@@ -60,13 +60,14 @@ buildPythonPackage rec {
     attrs
     pydevd
     pytest-mock
-    pytestCheckHook
+    pytest7CheckHook
   ];
 
   pythonImportsCheck = [ "omegaconf" ];
 
   pytestFlags = [
     "-Wignore::DeprecationWarning"
+    "-Wignore::UserWarning"
   ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/onnxconverter-common/default.nix b/pkgs/development/python-modules/onnxconverter-common/default.nix
index 075f2bb29ef4..f1abe38004fd 100644
--- a/pkgs/development/python-modules/onnxconverter-common/default.nix
+++ b/pkgs/development/python-modules/onnxconverter-common/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "onnxconverter-common";
-  version = "1.14.0";
+  version = "1.15.0";
 
   pyproject = true;
 
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "microsoft";
     repo = "onnxconverter-common";
     tag = "v${version}";
-    hash = "sha256-NbHyjLcr/Gq1zRiJW3ZBpEVQGVQGhp7SmfVd5hBIi2o=";
+    hash = "sha256-e4rk1qTTSEFu+g/cP+RmMUqxkBQfodIpr2CVK24DPv4=";
   };
 
   build-system = [
@@ -56,7 +56,7 @@ buildPythonPackage rec {
   meta = {
     description = "ONNX Converter and Optimization Tools";
     homepage = "https://github.com/microsoft/onnxconverter-common";
-    changelog = "https://github.com/microsoft/onnxconverter-common/releases/tag/v${version}";
+    changelog = "https://github.com/microsoft/onnxconverter-common/releases/tag/${src.tag}";
     license = with lib.licenses; [ mit ];
   };
 }
diff --git a/pkgs/development/python-modules/onnxmltools/default.nix b/pkgs/development/python-modules/onnxmltools/default.nix
index 350cea07a6d0..809ab48115ba 100644
--- a/pkgs/development/python-modules/onnxmltools/default.nix
+++ b/pkgs/development/python-modules/onnxmltools/default.nix
@@ -23,14 +23,14 @@
 
 buildPythonPackage rec {
   pname = "onnxmltools";
-  version = "1.13";
+  version = "1.14.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "onnx";
     repo = "onnxmltools";
-    tag = "v${version}";
-    hash = "sha256-uNd7N7/FgX8zaJp8ouvftwGqGqas8lZRXFmjpS+t2B4=";
+    tag = version;
+    hash = "sha256-CcZlGLX8/ANHnhoOv5s/ybBN74gRH/8eLYJ6q/BJo/4=";
   };
 
   postPatch = ''
@@ -71,7 +71,7 @@ buildPythonPackage rec {
   meta = {
     description = "ONNXMLTools enables conversion of models to ONNX";
     homepage = "https://github.com/onnx/onnxmltools";
-    changelog = "https://github.com/onnx/onnxmltools/blob/v${version}/CHANGELOGS.md";
+    changelog = "https://github.com/onnx/onnxmltools/blob/${src.tag}/CHANGELOGS.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ happysalada ];
   };
diff --git a/pkgs/development/python-modules/onnxslim/default.nix b/pkgs/development/python-modules/onnxslim/default.nix
index 6710f1064990..a2e35dc06d0e 100644
--- a/pkgs/development/python-modules/onnxslim/default.nix
+++ b/pkgs/development/python-modules/onnxslim/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "onnxslim";
-  version = "0.1.57";
+  version = "0.1.62";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-VI1OaNMHuL2AhYxZ/n5zrwlqnfcCbjY39QXHX8gcdw8=";
+    hash = "sha256-f9SYFsqIM1h+W62ut3gezrNvv02mMVM/Q9UONJsE2Wg=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/open-clip-torch/default.nix b/pkgs/development/python-modules/open-clip-torch/default.nix
index e35c30030bda..e3a61f9300f9 100644
--- a/pkgs/development/python-modules/open-clip-torch/default.nix
+++ b/pkgs/development/python-modules/open-clip-torch/default.nix
@@ -29,14 +29,14 @@
 }:
 buildPythonPackage rec {
   pname = "open-clip-torch";
-  version = "2.32.0";
+  version = "3.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "mlfoundations";
     repo = "open_clip";
     tag = "v${version}";
-    hash = "sha256-HXzorEAVPieCHfW3xzXqNTTIzJSbIuaZhcfcp0htdCk=";
+    hash = "sha256-MMvDg5opsu9ILGHc1rJjWQfTb3T0PZ0i+8GSrQvIu8Y=";
   };
 
   build-system = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/openai/default.nix b/pkgs/development/python-modules/openai/default.nix
index 6bffb9b214e2..71c1af3f0f4e 100644
--- a/pkgs/development/python-modules/openai/default.nix
+++ b/pkgs/development/python-modules/openai/default.nix
@@ -136,7 +136,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python client library for the OpenAI API";
     homepage = "https://github.com/openai/openai-python";
-    changelog = "https://github.com/openai/openai-python/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/openai/openai-python/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     maintainers = [ lib.maintainers.malo ];
     mainProgram = "openai";
diff --git a/pkgs/development/python-modules/openapi-spec-validator/default.nix b/pkgs/development/python-modules/openapi-spec-validator/default.nix
index 7bb12970bd87..9e87a51128d1 100644
--- a/pkgs/development/python-modules/openapi-spec-validator/default.nix
+++ b/pkgs/development/python-modules/openapi-spec-validator/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "openapi-spec-validator";
-  version = "0.7.1";
+  version = "0.7.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "python-openapi";
     repo = "openapi-spec-validator";
     tag = version;
-    hash = "sha256-X0ePdHQeBSWjsCFQgCoNloQZRhKbvPBE43aavBppvmg=";
+    hash = "sha256-APEx7+vc824DLmdzLvhfFVrcjPxVwwUwxkh19gjXEvc=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -62,7 +62,7 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
-    changelog = "https://github.com/p1c2u/openapi-spec-validator/releases/tag/${version}";
+    changelog = "https://github.com/p1c2u/openapi-spec-validator/releases/tag/${src.tag}";
     description = "Validates OpenAPI Specs against the OpenAPI 2.0 (aka Swagger) and OpenAPI 3.0.0 specification";
     mainProgram = "openapi-spec-validator";
     homepage = "https://github.com/p1c2u/openapi-spec-validator";
diff --git a/pkgs/development/python-modules/opencensus-ext-azure/default.nix b/pkgs/development/python-modules/opencensus-ext-azure/default.nix
index 34db90917e06..07dab62b2ec9 100644
--- a/pkgs/development/python-modules/opencensus-ext-azure/default.nix
+++ b/pkgs/development/python-modules/opencensus-ext-azure/default.nix
@@ -12,12 +12,12 @@
 
 buildPythonPackage rec {
   pname = "opencensus-ext-azure";
-  version = "1.1.14";
+  version = "1.1.15";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ycbrrVQq62GBMyLmJ9WImlY+e4xOAkv1hGnQbbc6sUg=";
+    hash = "sha256-jRCK8Vh16jxSI4ZG+6kkw7qfv6rx/Q01BwfcW3iArec=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/openpyxl/default.nix b/pkgs/development/python-modules/openpyxl/default.nix
index e7c62ed57f02..f973232edbfd 100644
--- a/pkgs/development/python-modules/openpyxl/default.nix
+++ b/pkgs/development/python-modules/openpyxl/default.nix
@@ -6,8 +6,7 @@
   lxml,
   pandas,
   pillow,
-  pytest7CheckHook,
-  pythonAtLeast,
+  pytestCheckHook,
   pythonOlder,
   setuptools,
 }:
@@ -35,7 +34,7 @@ buildPythonPackage rec {
     lxml
     pandas
     pillow
-    pytest7CheckHook
+    pytestCheckHook
   ];
 
   pytestFlags = [
@@ -43,26 +42,8 @@ buildPythonPackage rec {
   ];
 
   disabledTests = [
-    # Tests broken since lxml 2.12; https://foss.heptapod.net/openpyxl/openpyxl/-/issues/2116
-    "test_read"
-    "test_read_comments"
-    "test_ignore_external_blip"
-    "test_from_xml"
-    "test_filenames"
-    "test_exts"
-    "test_from_complex"
-    "test_merge_named_styles"
-    "test_unprotected_cell"
-    "test_none_values"
-    "test_rgb_colors"
-    "test_named_styles"
-    "test_read_ole_link"
-  ]
-  ++ lib.optionals (pythonAtLeast "3.11") [
-    "test_broken_sheet_ref"
-    "test_name_invalid_index"
-    "test_defined_names_print_area"
-    "test_no_styles"
+    # lxml 6.0
+    "test_iterparse"
   ];
 
   pythonImportsCheck = [ "openpyxl" ];
diff --git a/pkgs/development/python-modules/openstep-plist/default.nix b/pkgs/development/python-modules/openstep-plist/default.nix
index eca377b4b738..7bde570f3d48 100644
--- a/pkgs/development/python-modules/openstep-plist/default.nix
+++ b/pkgs/development/python-modules/openstep-plist/default.nix
@@ -2,6 +2,7 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  fetchpatch,
   cython,
   setuptools,
   setuptools-scm,
@@ -25,6 +26,14 @@ buildPythonPackage rec {
     setuptools-scm
   ];
 
+  patches = [
+    (fetchpatch {
+      name = "openstep-plist-cpython-3.1-compat.patch";
+      url = "https://github.com/fonttools/openstep-plist/commit/5467a2c3bed3004b79c70b5b288f33293c96742b.patch";
+      hash = "sha256-dKZgthvPgdnCKA0o70TBtvipwnBr4wcayvK8SFqwrbY=";
+    })
+  ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "openstep_plist" ];
diff --git a/pkgs/development/python-modules/opentypespec/default.nix b/pkgs/development/python-modules/opentypespec/default.nix
index 81fc60e5dc55..8359a2687d5d 100644
--- a/pkgs/development/python-modules/opentypespec/default.nix
+++ b/pkgs/development/python-modules/opentypespec/default.nix
@@ -3,16 +3,23 @@
   buildPythonPackage,
   fetchPypi,
   unittestCheckHook,
+  setuptools-scm,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "opentypespec";
-  version = "1.9.1";
-  format = "setuptools";
+  version = "1.9.2";
+  pyproject = true;
+
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-fOEHmtlCkFhn1jyIA+CsHIfud7x3PPb7UWQsnrVyDqY=";
+    hash = "sha256-5j89rMDKxGLLoN88/T7+e0xE8/eOmKN3eDpWxekJGiQ=";
   };
 
   nativeCheckInputs = [ unittestCheckHook ];
diff --git a/pkgs/development/python-modules/openusd/default.nix b/pkgs/development/python-modules/openusd/default.nix
index 32937c89d3ed..5864feb8fef2 100644
--- a/pkgs/development/python-modules/openusd/default.nix
+++ b/pkgs/development/python-modules/openusd/default.nix
@@ -51,14 +51,14 @@ in
 
 buildPythonPackage rec {
   pname = "openusd";
-  version = "25.05.01";
+  version = "25.08";
   pyproject = false;
 
   src = fetchFromGitHub {
     owner = "PixarAnimationStudios";
     repo = "OpenUSD";
     tag = "v${version}";
-    hash = "sha256-gxikEC4MqTkhgYaRsCVYtS/VmXClSaCMdzpQ0LmiR7Q=";
+    hash = "sha256-k+rmC/e8fJexZ++AAinuDJFOK/oqC90B4NriJvaX71w=";
   };
 
   stdenv = python.stdenv;
diff --git a/pkgs/development/python-modules/opower/default.nix b/pkgs/development/python-modules/opower/default.nix
index c980deaaba50..270f3fcc91e0 100644
--- a/pkgs/development/python-modules/opower/default.nix
+++ b/pkgs/development/python-modules/opower/default.nix
@@ -41,6 +41,11 @@ buildPythonPackage rec {
     python-dotenv
   ];
 
+  disabledTestPaths = [
+    # network access
+    "tests/test_opower.py"
+  ];
+
   pythonImportsCheck = [ "opower" ];
 
   disabledTests = [
diff --git a/pkgs/development/python-modules/optimum/default.nix b/pkgs/development/python-modules/optimum/default.nix
index 79959c3a651e..d63eeb4af122 100644
--- a/pkgs/development/python-modules/optimum/default.nix
+++ b/pkgs/development/python-modules/optimum/default.nix
@@ -28,7 +28,7 @@
 
 buildPythonPackage rec {
   pname = "optimum";
-  version = "1.26.1";
+  version = "1.27.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -37,7 +37,7 @@ buildPythonPackage rec {
     owner = "huggingface";
     repo = "optimum";
     tag = "v${version}";
-    hash = "sha256-GfUlvz7b0DlqBPibndRzUkszGnbYXg6E8u144ZFAZxA=";
+    hash = "sha256-ZH7D3dc6f33Jl1JN7BIGUhTXDxOLv0FR9T3c5LMmhiY=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/optree/default.nix b/pkgs/development/python-modules/optree/default.nix
index f6ef3fd6b63f..5b7be8f92b5e 100644
--- a/pkgs/development/python-modules/optree/default.nix
+++ b/pkgs/development/python-modules/optree/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "optree";
-  version = "0.14.1";
+  version = "0.17.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "metaopt";
     repo = "optree";
     tag = "v${version}";
-    hash = "sha256-5PIe/mXPNohwM0oNT/zSPmNUycjXuujtIFCki5t7V1I=";
+    hash = "sha256-4ZkUdGF+Fauy6KWbyrGQ684Ay5XlFT2S2I9lv/1KeWs=";
   };
 
   dontUseCmakeConfigure = true;
@@ -41,6 +41,10 @@ buildPythonPackage rec {
   disabledTests = [
     # Fails because the 'test_treespec' module can't be found
     "test_treespec_pickle_missing_registration"
+    # optree import during tests raises CalledProcessError
+    "test_warn_deprecated_import"
+    "test_import_no_warnings"
+    "test_treespec_construct"
   ];
   pythonImportsCheck = [ "optree" ];
 
diff --git a/pkgs/development/python-modules/optuna/default.nix b/pkgs/development/python-modules/optuna/default.nix
index 007b43ef6bfc..7bc6f58ee068 100644
--- a/pkgs/development/python-modules/optuna/default.nix
+++ b/pkgs/development/python-modules/optuna/default.nix
@@ -43,14 +43,14 @@
 
 buildPythonPackage rec {
   pname = "optuna";
-  version = "4.2.1";
+  version = "4.4.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "optuna";
     repo = "optuna";
     tag = "v${version}";
-    hash = "sha256-WLrdHrdfCtCZMW2J375N8vmod7FcKCMwQPGKicRA878=";
+    hash = "sha256-S9F9xni1cnmIbWu5n7BFvUCvQmBP3iBYS1ntg6vQ8ZQ=";
   };
 
   build-system = [
@@ -143,7 +143,7 @@ buildPythonPackage rec {
   meta = {
     description = "Hyperparameter optimization framework";
     homepage = "https://optuna.org/";
-    changelog = "https://github.com/optuna/optuna/releases/tag/${version}";
+    changelog = "https://github.com/optuna/optuna/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ natsukium ];
     mainProgram = "optuna";
diff --git a/pkgs/development/python-modules/optype/default.nix b/pkgs/development/python-modules/optype/default.nix
index 0b29c8a5fddf..e810b2744f41 100644
--- a/pkgs/development/python-modules/optype/default.nix
+++ b/pkgs/development/python-modules/optype/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "optype";
-  version = "0.12.0";
+  version = "0.13.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jorenham";
     repo = "optype";
     tag = "v${version}";
-    hash = "sha256-sDMB9gSYf108Elsqj6Obk+6B4QKiJcStkJndVrIAWQI=";
+    hash = "sha256-GhG2TR5FJgEXBXLyGTNQKFYtR2iZ0tLgZ9B0YL8SXu8=";
   };
 
   disabled = pythonOlder "3.11";
diff --git a/pkgs/development/python-modules/oracledb/default.nix b/pkgs/development/python-modules/oracledb/default.nix
index 682170154934..e0ea963e9d4e 100644
--- a/pkgs/development/python-modules/oracledb/default.nix
+++ b/pkgs/development/python-modules/oracledb/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "oracledb";
-  version = "3.2.0";
+  version = "3.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-m/nxyT5TFCsz0cXr9aur7r0gYqAdXq1ou7ZAQ57PIiM=";
+    hash = "sha256-6DDTVEoVeClryqVMboyK4QpYx9tGfFKMSyetv5yLTLA=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/orange-canvas-core/default.nix b/pkgs/development/python-modules/orange-canvas-core/default.nix
index 354e8e5d4f48..91ad4e2334c1 100644
--- a/pkgs/development/python-modules/orange-canvas-core/default.nix
+++ b/pkgs/development/python-modules/orange-canvas-core/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "orange-canvas-core";
-  version = "0.2.5";
+  version = "0.2.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "biolab";
     repo = "orange-canvas-core";
     tag = version;
-    hash = "sha256-uh9wNqgLYRcnCSOdpeLx6ZTRC0cpq6lG/sqmrYLR+3g=";
+    hash = "sha256-cEy9ADU/jZoKmGXVlqwG+qWKZ22STjALgCb1IxAwpO0=";
   };
 
   build-system = [ setuptools ];
@@ -95,7 +95,7 @@ buildPythonPackage rec {
   meta = {
     description = "Orange framework for building graphical user interfaces for editing workflows";
     homepage = "https://github.com/biolab/orange-canvas-core";
-    changelog = "https://github.com/biolab/orange-canvas-core/releases/tag/${version}";
+    changelog = "https://github.com/biolab/orange-canvas-core/releases/tag/${src.tag}";
     license = [ lib.licenses.gpl3 ];
     maintainers = [ lib.maintainers.lucasew ];
     # Segmentation fault during tests
diff --git a/pkgs/development/python-modules/orange3/default.nix b/pkgs/development/python-modules/orange3/default.nix
index c98128db9d73..30a49b4edc40 100644
--- a/pkgs/development/python-modules/orange3/default.nix
+++ b/pkgs/development/python-modules/orange3/default.nix
@@ -58,14 +58,14 @@
 let
   self = buildPythonPackage rec {
     pname = "orange3";
-    version = "3.38.1";
+    version = "3.39.0";
     pyproject = true;
 
     src = fetchFromGitHub {
       owner = "biolab";
       repo = "orange3";
       tag = version;
-      hash = "sha256-bzF2rK8/cKAoe9Wzj+rQJatgBQTP3KVtT6xU+IzKYIY=";
+      hash = "sha256-P2e3Wq33UXnTmGSxkoW8kYYCBfYBB9Z50v4g7n//Fbw=";
     };
 
     build-system = [
diff --git a/pkgs/development/python-modules/orderly-set/default.nix b/pkgs/development/python-modules/orderly-set/default.nix
index be269ed8c173..3d7c05c53fb3 100644
--- a/pkgs/development/python-modules/orderly-set/default.nix
+++ b/pkgs/development/python-modules/orderly-set/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
 
   # build-system
-  setuptools,
+  flit-core,
 
   # tests
   pytestCheckHook,
@@ -12,18 +12,18 @@
 
 buildPythonPackage rec {
   pname = "orderly-set";
-  version = "5.4.1";
+  version = "5.5.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "seperman";
     repo = "orderly-set";
     tag = version;
-    hash = "sha256-0B8qnXU6oET1J933uTVDf2XIHwNzecxQ3FiP7EMnxQc=";
+    hash = "sha256-xrxH/LB+cyZlVf+sVwOtAf9+DojYPDnudHpqlVuARLg=";
   };
 
   build-system = [
-    setuptools
+    flit-core
   ];
 
   pythonImportsCheck = [
diff --git a/pkgs/development/python-modules/orgparse/default.nix b/pkgs/development/python-modules/orgparse/default.nix
index 65b99928cd61..025f607958f8 100644
--- a/pkgs/development/python-modules/orgparse/default.nix
+++ b/pkgs/development/python-modules/orgparse/default.nix
@@ -7,11 +7,11 @@
 
 buildPythonPackage rec {
   pname = "orgparse";
-  version = "0.4.20231004";
+  version = "0.4.20250520";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pOOK6tq/mYiw9npmrNCCedGCILy8QioSkGDCiQu6kaA=";
+    hash = "sha256-ZHL9Ft3Ku1I5GFBchlJjq/oFrIC1k+ZooInNopGxot4=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/osxphotos/default.nix b/pkgs/development/python-modules/osxphotos/default.nix
index eece6a6c86b3..d4cef60586d9 100644
--- a/pkgs/development/python-modules/osxphotos/default.nix
+++ b/pkgs/development/python-modules/osxphotos/default.nix
@@ -35,14 +35,14 @@
 
 buildPythonPackage rec {
   pname = "osxphotos";
-  version = "0.69.2";
+  version = "0.72.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "RhetTbull";
     repo = "osxphotos";
     tag = "v${version}";
-    hash = "sha256-uVcoGIfxz+jKirnE3giST/v20eA5pq+LHgrsRb5b+Lc=";
+    hash = "sha256-6BUdF2l/C0Zim7ei/t4DKs4RUIDMWikhZmhattYrXmg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/outlines/default.nix b/pkgs/development/python-modules/outlines/default.nix
index f29fdac01667..6cef333055bd 100644
--- a/pkgs/development/python-modules/outlines/default.nix
+++ b/pkgs/development/python-modules/outlines/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "outlines";
-  version = "0.1.13";
+  version = "1.2.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "outlines-dev";
     repo = "outlines";
     tag = version;
-    hash = "sha256-HuJqLbBHyoyY5ChQQi+9ftvPjLuh63Guk2w6KSZxq6s=";
+    hash = "sha256-WmkA+plIouEzleo3yoSxfCjK0E3EfMGQIPl20aIKxl8=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/packageurl-python/default.nix b/pkgs/development/python-modules/packageurl-python/default.nix
index c3d4e4e792ba..8d8eb1394455 100644
--- a/pkgs/development/python-modules/packageurl-python/default.nix
+++ b/pkgs/development/python-modules/packageurl-python/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "packageurl-python";
-  version = "0.16.0";
+  version = "0.17.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "packageurl_python";
     inherit version;
-    hash = "sha256-aeO/ijky/pwkAPVqrrn4aRHs7i+TmNvhtY7DQ0C+Nl0=";
+    hash = "sha256-cZmV8Mf3BokCd7pX7JWvyqlpbINqdnV3ChJ5sBpB974=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pandas/default.nix b/pkgs/development/python-modules/pandas/default.nix
index 82351f93e3b1..970a880d0fe6 100644
--- a/pkgs/development/python-modules/pandas/default.nix
+++ b/pkgs/development/python-modules/pandas/default.nix
@@ -3,7 +3,6 @@
   stdenv,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
   pythonOlder,
 
   # build-system
@@ -64,7 +63,7 @@
 let
   pandas = buildPythonPackage rec {
     pname = "pandas";
-    version = "2.2.3";
+    version = "2.3.1";
     pyproject = true;
 
     disabled = pythonOlder "3.9";
@@ -73,17 +72,9 @@ let
       owner = "pandas-dev";
       repo = "pandas";
       tag = "v${version}";
-      hash = "sha256-6YUROcqOV2P1AbJF9IMBIqTt7/PSTeXDwGgE4uI9GME=";
+      hash = "sha256-xvdiWjJ5uHfrzXB7c4cYjFjZ6ue5i7qzb4tAEPJMAV0=";
     };
 
-    patches = [
-      (fetchpatch {
-        name = "musl.patch";
-        url = "https://github.com/pandas-dev/pandas/commit/1e487982ff7501f07e2bba7a7d924fb92b3d5c7f.patch";
-        hash = "sha256-F1pVce1W951Ea82Ux198e5fBFH6kDOG+EeslDTYbjio=";
-      })
-    ];
-
     # A NOTE regarding the Numpy version relaxing: Both Numpy versions 1.x &
     # 2.x are supported. However upstream wants to always build with Numpy 2,
     # and with it to still be able to run with a Numpy 1 or 2. We insist to
@@ -97,12 +88,10 @@ let
     # that override globally the `numpy` attribute to point to `numpy_1`.
     postPatch = ''
       substituteInPlace pyproject.toml \
-        --replace-fail "numpy>=2.0" numpy \
-        --replace-fail "meson-python==0.13.1" "meson-python>=0.13.1" \
-        --replace-fail "meson==1.2.1" "meson>=1.2.1"
+        --replace-fail "numpy>=2.0" numpy
     '';
 
-    nativeBuildInputs = [
+    build-system = [
       cython
       meson-python
       meson
@@ -115,7 +104,7 @@ let
 
     enableParallelBuilding = true;
 
-    propagatedBuildInputs = [
+    dependencies = [
       numpy
       python-dateutil
       pytz
diff --git a/pkgs/development/python-modules/panel/default.nix b/pkgs/development/python-modules/panel/default.nix
index 5269e2bf612e..85779346c836 100644
--- a/pkgs/development/python-modules/panel/default.nix
+++ b/pkgs/development/python-modules/panel/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "panel";
-  version = "1.7.2";
+  version = "1.7.5";
 
   format = "wheel";
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   # tries to fetch even more artifacts
   src = fetchPypi {
     inherit pname version format;
-    hash = "sha256-5gFBqEupP+v/W+tWe+x9wScejTJcvaplXtt1Gidoazo=";
+    hash = "sha256-HDtKM11W1aoM9dbhw2hKKX4kpiz5k0XF6euFUoN7l8M=";
     dist = "py3";
     python = "py3";
   };
diff --git a/pkgs/development/python-modules/panphon/default.nix b/pkgs/development/python-modules/panphon/default.nix
index 230c7a310ba8..183d440da9de 100644
--- a/pkgs/development/python-modules/panphon/default.nix
+++ b/pkgs/development/python-modules/panphon/default.nix
@@ -18,12 +18,12 @@
 
 buildPythonPackage rec {
   pname = "panphon";
-  version = "0.22.0";
+  version = "0.22.2";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-iSdCZjzeZhxsrkaRYHpg60evmo9g09a9Fwr0I5WWd1A=";
+    hash = "sha256-OD1HfVh/66HKWoKHjiT+d8FkXW++ngHJ6X1JjYopujU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/papermill/default.nix b/pkgs/development/python-modules/papermill/default.nix
index 9ece875296c3..5e6bb7b71327 100644
--- a/pkgs/development/python-modules/papermill/default.nix
+++ b/pkgs/development/python-modules/papermill/default.nix
@@ -95,6 +95,9 @@ buildPythonPackage rec {
   disabledTests = [
     # pytest 8 compat
     "test_read_with_valid_file_extension"
+
+    # azure datalake api compat issue
+    "test_create_adapter"
   ]
   ++ lib.optionals stdenv.hostPlatform.isDarwin [
     # might fail due to the sandbox
diff --git a/pkgs/development/python-modules/parameterized/default.nix b/pkgs/development/python-modules/parameterized/default.nix
index 643bab1e58dc..0e14c59f6f2e 100644
--- a/pkgs/development/python-modules/parameterized/default.nix
+++ b/pkgs/development/python-modules/parameterized/default.nix
@@ -40,6 +40,9 @@ buildPythonPackage rec {
 
   nativeBuildInputs = [ setuptools ];
 
+  # 'yield' keyword is allowed in fixtures, but not in tests (test_naked_function)
+  doCheck = false;
+
   checkInputs = [
     mock
     pytestCheckHook
diff --git a/pkgs/development/python-modules/paramiko/default.nix b/pkgs/development/python-modules/paramiko/default.nix
index c779ec730b49..7cb53debdf75 100644
--- a/pkgs/development/python-modules/paramiko/default.nix
+++ b/pkgs/development/python-modules/paramiko/default.nix
@@ -3,7 +3,6 @@
   bcrypt,
   buildPythonPackage,
   cryptography,
-  fetchpatch,
   fetchPypi,
   gssapi,
   icecream,
@@ -18,23 +17,14 @@
 
 buildPythonPackage rec {
   pname = "paramiko";
-  version = "3.5.1";
+  version = "4.0.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ssZlvEWyshW9fX8DmQGxSwZ9oA86EeZkCZX9WPJmSCI=";
+    hash = "sha256-aiXwezgMycmojSuSCtNxZ6xGZ/jZiGzOvY+Q9lS11p8=";
   };
 
-  patches = [
-    # Fix usage of dsa keys
-    # https://github.com/paramiko/paramiko/pull/1606/
-    (fetchpatch {
-      url = "https://github.com/paramiko/paramiko/commit/18e38b99f515056071fb27b9c1a4f472005c324a.patch";
-      hash = "sha256-bPDghPeLo3NiOg+JwD5CJRRLv2VEqmSx1rOF2Tf8ZDA=";
-    })
-  ];
-
   build-system = [ setuptools ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/partial-json-parser/default.nix b/pkgs/development/python-modules/partial-json-parser/default.nix
index f356e6e0a312..6125d6a66c18 100644
--- a/pkgs/development/python-modules/partial-json-parser/default.nix
+++ b/pkgs/development/python-modules/partial-json-parser/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "partial-json-parser";
-  version = "0.2.1.1.post5";
+  version = "0.2.1.1.post6";
   pyproject = true;
 
   src = fetchPypi {
     pname = "partial_json_parser";
     inherit version;
-    hash = "sha256-mScQrGfpCzZ5IdUnJ2mJKAQPdxO6fsszuWNx6nrsgso=";
+    hash = "sha256-Q4lraJKWeCJMu+SISmpf6SUd7UswuLfX61aeX+6pOvw=";
   };
 
   build-system = [ pdm-backend ];
diff --git a/pkgs/development/python-modules/paste/default.nix b/pkgs/development/python-modules/paste/default.nix
index ae7eb8b7a79e..5674b4ceb3f1 100644
--- a/pkgs/development/python-modules/paste/default.nix
+++ b/pkgs/development/python-modules/paste/default.nix
@@ -40,6 +40,11 @@ buildPythonPackage rec {
     touch tests/urlparser_data/secured.txt
   '';
 
+  disabledTests = [
+    # pkg_resources deprecation warning
+    "test_form"
+  ];
+
   pythonNamespaces = [ "paste" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/path/default.nix b/pkgs/development/python-modules/path/default.nix
index 1f7c3361eb3a..1fa86795c4af 100644
--- a/pkgs/development/python-modules/path/default.nix
+++ b/pkgs/development/python-modules/path/default.nix
@@ -11,16 +11,20 @@
 
 buildPythonPackage rec {
   pname = "path";
-  version = "17.1.0";
+  version = "17.1.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-1B4F7U+h1PbXAt88HgoaJV17VEKHQyRWRV3HxR5fmOk=";
+    hash = "sha256-Lfy/7ItNlg80acUqzxMxE8KovxKse5jWKfqRr4ckjUI=";
   };
 
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
   nativeBuildInputs = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/pathvalidate/default.nix b/pkgs/development/python-modules/pathvalidate/default.nix
index 0927f880fd46..f4c8a5133500 100644
--- a/pkgs/development/python-modules/pathvalidate/default.nix
+++ b/pkgs/development/python-modules/pathvalidate/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "pathvalidate";
-  version = "3.2.3";
+  version = "3.3.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-WbW5J44wOC1tITSXYjBD6+Y/EOKQVb5EGanATHIXOcs=";
+    hash = "sha256-sYwHISv+rWJDRbuOHWFBzc8Vo5c2mU6guUA1rSsboXc=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/pcffont/default.nix b/pkgs/development/python-modules/pcffont/default.nix
index 952e466262dd..59cff062a80b 100644
--- a/pkgs/development/python-modules/pcffont/default.nix
+++ b/pkgs/development/python-modules/pcffont/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pcffont";
-  version = "0.0.20";
+  version = "0.0.21";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "pcffont";
     inherit version;
-    hash = "sha256-dkf0irrrlSoj8TH+C/kmkVPJORWGl0EbgvckfPBes7I=";
+    hash = "sha256-RWmR6shNFuJytOfRAVTiNdIJMRpkBchBj8zOy4ybE9o=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/peewee/default.nix b/pkgs/development/python-modules/peewee/default.nix
index 0d9e1f674072..ae485714ade8 100644
--- a/pkgs/development/python-modules/peewee/default.nix
+++ b/pkgs/development/python-modules/peewee/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "peewee";
-  version = "3.18.1";
+  version = "3.18.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "coleifer";
     repo = "peewee";
     tag = version;
-    hash = "sha256-7MLDhMiW9LaedPMQ2QqSqos4SegzUmTX1joyV18MkEg=";
+    hash = "sha256-BIOY3vAHzSonxXYFmfFbVxbbUWnUVtcBRsTVMRo7peE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/peft/default.nix b/pkgs/development/python-modules/peft/default.nix
index e77696cae0df..e29a2eee51fc 100644
--- a/pkgs/development/python-modules/peft/default.nix
+++ b/pkgs/development/python-modules/peft/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "peft";
-  version = "0.15.2";
+  version = "0.17.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = "peft";
     tag = "v${version}";
-    hash = "sha256-c9oHBQCdJpPAeI7xwePXx75Sp39I8QVjRZSxxSOm2PM=";
+    hash = "sha256-YkJGVSeeEs+ErOUgRL5OXDUaJDqABjOTicM+1gX+CDM=";
   };
 
   build-system = [ setuptools ];
@@ -102,6 +102,9 @@ buildPythonPackage rec {
     "tests/test_tuners_utils.py"
     "tests/test_vision_models.py"
     "tests/test_xlora.py"
+    "tests/test_target_parameters.py"
+    "tests/test_seq_classifier.py"
+    "tests/test_low_level_api.py"
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/pg8000/default.nix b/pkgs/development/python-modules/pg8000/default.nix
index 2500db486c60..094ee63ca9a1 100644
--- a/pkgs/development/python-modules/pg8000/default.nix
+++ b/pkgs/development/python-modules/pg8000/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "pg8000";
-  version = "1.31.2";
+  version = "1.31.4";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HqRs8J2Oygf+fqre/XlR43vuf6vmdd8WTxpXL/swCHY=";
+    hash = "sha256-5+zOQzmJHyewsi4veeue/kQRi9OEIHNZ/Bg1D3iKzgA=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pgmpy/default.nix b/pkgs/development/python-modules/pgmpy/default.nix
index 6e9f962c60bd..80d79d8978f5 100644
--- a/pkgs/development/python-modules/pgmpy/default.nix
+++ b/pkgs/development/python-modules/pgmpy/default.nix
@@ -27,14 +27,14 @@
 }:
 buildPythonPackage rec {
   pname = "pgmpy";
-  version = "0.1.26";
+  version = "1.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pgmpy";
     repo = "pgmpy";
     tag = "v${version}";
-    hash = "sha256-RusVREhEXYaJuQXTaCQ7EJgbo4+wLB3wXXCAc3sBGtU=";
+    hash = "sha256-WmRtek3lN7vEfXqoaZDiaNjMQ7R2PmJ/OEwxOV7m5sE=";
   };
 
   dependencies = [
@@ -78,7 +78,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python Library for learning (Structure and Parameter), inference (Probabilistic and Causal), and simulations in Bayesian Networks";
     homepage = "https://github.com/pgmpy/pgmpy";
-    changelog = "https://github.com/pgmpy/pgmpy/releases/tag/v${version}";
+    changelog = "https://github.com/pgmpy/pgmpy/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ happysalada ];
   };
diff --git a/pkgs/development/python-modules/pgspecial/default.nix b/pkgs/development/python-modules/pgspecial/default.nix
index 641416809161..5876bab95168 100644
--- a/pkgs/development/python-modules/pgspecial/default.nix
+++ b/pkgs/development/python-modules/pgspecial/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "pgspecial";
-  version = "2.1.3";
+  version = "2.2.1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-bU0jFq/31HlU25nUw5HWwLsmVo68udFR9l2reTi2y+I=";
+    hash = "sha256-2mx/zHvve7ATLcIEb3TsZROx/m8MgOVSjWMNFLfEhJ0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/phik/default.nix b/pkgs/development/python-modules/phik/default.nix
index 90c5eebb2721..72e4d48abf2f 100644
--- a/pkgs/development/python-modules/phik/default.nix
+++ b/pkgs/development/python-modules/phik/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "phik";
-  version = "0.12.4";
+  version = "0.12.5";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "KaveIO";
     repo = "PhiK";
     tag = "v${version}";
-    hash = "sha256-YsH7vVn6gzejunUjUY/RIcvWtaQ/W1gbciJWKi5LDTk=";
+    hash = "sha256-/Zzin3IHwlFEDQwKjzTwY4ET2r0k3Ne/2lGzXkur9p8=";
   };
 
   build-system = [
@@ -67,7 +67,7 @@ buildPythonPackage rec {
       Pearson’s hypothesis test of independence of two variables.
     '';
     homepage = "https://phik.readthedocs.io/";
-    changelog = "https://github.com/KaveIO/PhiK/blob/${version}/CHANGES.rst";
+    changelog = "https://github.com/KaveIO/PhiK/blob/${src.tag}/CHANGES.rst";
     license = licenses.asl20;
     maintainers = with maintainers; [ melsigl ];
   };
diff --git a/pkgs/development/python-modules/phonenumbers/default.nix b/pkgs/development/python-modules/phonenumbers/default.nix
index e8b59a144158..ce2ab2e57b44 100644
--- a/pkgs/development/python-modules/phonenumbers/default.nix
+++ b/pkgs/development/python-modules/phonenumbers/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "phonenumbers";
-  version = "9.0.5";
+  version = "9.0.10";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-cP3haKkt2cc/V4cjWVFRgdbN5ruOfsVmDpTEykVpLFA=";
+    hash = "sha256-wtFaap0FNLFKd2T1EkatqZVj4mP2W4CwJR0adgrEobo=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pillow-avif-plugin/default.nix b/pkgs/development/python-modules/pillow-avif-plugin/default.nix
index 3750e1d1dd4c..4f06ceba1bb5 100644
--- a/pkgs/development/python-modules/pillow-avif-plugin/default.nix
+++ b/pkgs/development/python-modules/pillow-avif-plugin/default.nix
@@ -1,25 +1,32 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   setuptools,
   libavif,
   pillow,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "pillow-avif-plugin";
-  version = "1.4.6";
+  version = "1.5.2";
   pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "sha256-hVz1DQP2/Bbh/V42SzzqC3n0v5DTn/ISOWlzXYUeCLo=";
+  src = fetchFromGitHub {
+    owner = "fdintino";
+    repo = "pillow-avif-plugin";
+    tag = "v${version}";
+    hash = "sha256-gdDVgVNympxlTzj1VUqO+aU1/xWNjDm97a0biOTlKtA=";
   };
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [ setuptools ];
+
   buildInputs = [ libavif ];
-  propagatedBuildInputs = [ pillow ];
+
+  dependencies = [ pillow ];
+
+  nativeCheckInputs = [ pytestCheckHook ];
 
   meta = {
     description = "Pillow plugin that adds support for AVIF files";
diff --git a/pkgs/development/python-modules/pillow-heif/default.nix b/pkgs/development/python-modules/pillow-heif/default.nix
index 55114a3c6672..69826e90b683 100644
--- a/pkgs/development/python-modules/pillow-heif/default.nix
+++ b/pkgs/development/python-modules/pillow-heif/default.nix
@@ -27,14 +27,14 @@
 
 buildPythonPackage rec {
   pname = "pillow-heif";
-  version = "0.22.0";
+  version = "1.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "bigcat88";
     repo = "pillow_heif";
     tag = "v${version}";
-    hash = "sha256-xof6lFb0DhmWVmYuBNslcGZs82NRkcgZgt+SX9gsrBY=";
+    hash = "sha256-CY//orCEKBfgHF7lTTSMenDsvf9NOQo8iiQS3p9NMH8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pillow/default.nix b/pkgs/development/python-modules/pillow/default.nix
index 050c403b763a..153192fb6dbf 100644
--- a/pkgs/development/python-modules/pillow/default.nix
+++ b/pkgs/development/python-modules/pillow/default.nix
@@ -74,7 +74,7 @@ buildPythonPackage rec {
 
   pypaBuildFlags = [
     # Disable platform guessing, which tries various FHS paths
-    "--config=setting=--disable-platform-guessing"
+    "--config-setting=--disable-platform-guessing"
   ];
 
   preConfigure =
diff --git a/pkgs/development/python-modules/pinecone-client/default.nix b/pkgs/development/python-modules/pinecone-client/default.nix
index eff92a25eec1..a1aee13ecc50 100644
--- a/pkgs/development/python-modules/pinecone-client/default.nix
+++ b/pkgs/development/python-modules/pinecone-client/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "pinecone-client";
-  version = "5.4.2";
+  version = "7.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "pinecone-io";
     repo = "pinecone-python-client";
     tag = "v${version}";
-    hash = "sha256-5BCjqcJ+xCTTF/Q+PrgNV4Y/GcT2cfNqvY1ydUL6EZ8=";
+    hash = "sha256-PT8Jr3sq5iZ9VFt6H6t4lLk72FXnHdyPUbcNGftg4QU=";
   };
 
   build-system = [
@@ -56,7 +56,7 @@ buildPythonPackage rec {
   meta = {
     description = "Pinecone python client";
     homepage = "https://www.pinecone.io/";
-    changelog = "https://github.com/pinecone-io/pinecone-python-client/releases/tag/v${version}";
+    changelog = "https://github.com/pinecone-io/pinecone-python-client/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ happysalada ];
   };
diff --git a/pkgs/development/python-modules/pins/default.nix b/pkgs/development/python-modules/pins/default.nix
index e30b2f326a3e..1a2d5b2a05ff 100644
--- a/pkgs/development/python-modules/pins/default.nix
+++ b/pkgs/development/python-modules/pins/default.nix
@@ -28,7 +28,7 @@
 
 buildPythonPackage rec {
   pname = "pins";
-  version = "0.8.7";
+  version = "0.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -37,7 +37,7 @@ buildPythonPackage rec {
     owner = "rstudio";
     repo = "pins-python";
     tag = "v${version}";
-    hash = "sha256-79TVAfr872Twc7D2iej51jiKNwZ9ESOa66ItNDmyfFM=";
+    hash = "sha256-1NoJ2PA0ov9ZOWaZdlajV23UqTelRzfW7jESMsfOxkg=";
   };
 
   build-system = [
@@ -89,7 +89,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Module to publishes data, models and other Python objects";
     homepage = "https://github.com/rstudio/pins-python";
-    changelog = "https://github.com/rstudio/pins-python/releases/tag/v${version}";
+    changelog = "https://github.com/rstudio/pins-python/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/pip-system-certs/default.nix b/pkgs/development/python-modules/pip-system-certs/default.nix
index 0476aed56212..3503ba4d8405 100644
--- a/pkgs/development/python-modules/pip-system-certs/default.nix
+++ b/pkgs/development/python-modules/pip-system-certs/default.nix
@@ -3,29 +3,27 @@
   buildPythonPackage,
   fetchPypi,
   setuptools-scm,
-  wheel,
   git-versioner,
-  wrapt,
+  pip,
 }:
 
 buildPythonPackage rec {
   pname = "pip-system-certs";
-  version = "4.0";
+  version = "5.2";
   pyproject = true;
 
   src = fetchPypi {
     inherit version;
     pname = "pip_system_certs";
-    hash = "sha256-245qMTiNl5XskTmVffGon6UnT7ZhZEVv0JGl0+lMNQw=";
+    hash = "sha256-gLd2tc8XGRv5nTE2mbf84v24Tre7siX9E0EJqCcGQG8=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools-scm
-    wheel
     git-versioner
   ];
 
-  propagatedBuildInputs = [ wrapt ];
+  dependencies = [ pip ];
 
   pythonImportsCheck = [
     "pip_system_certs.wrapt_requests"
diff --git a/pkgs/development/python-modules/piqp/default.nix b/pkgs/development/python-modules/piqp/default.nix
index 15b609181960..63c7bd058b37 100644
--- a/pkgs/development/python-modules/piqp/default.nix
+++ b/pkgs/development/python-modules/piqp/default.nix
@@ -20,7 +20,7 @@
 }:
 buildPythonPackage rec {
   pname = "piqp";
-  version = "0.4.2";
+  version = "0.6.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "PREDICT-EPFL";
     repo = "piqp";
     tag = "v${version}";
-    hash = "sha256-/lADjg4NyDdV9yeYBW2gbPydY8TfV247B/dI/ViRVlI=";
+    hash = "sha256-hVUeDV2GrBAOIgaWhg+RV+8CFRIm8Kv6/wCs5bXs2aY=";
   };
 
   postPatch =
diff --git a/pkgs/development/python-modules/pixel-font-builder/default.nix b/pkgs/development/python-modules/pixel-font-builder/default.nix
index 0dd26012e434..66ef417e6b5d 100644
--- a/pkgs/development/python-modules/pixel-font-builder/default.nix
+++ b/pkgs/development/python-modules/pixel-font-builder/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "pixel-font-builder";
-  version = "0.0.34";
+  version = "0.0.37";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "pixel_font_builder";
     inherit version;
-    hash = "sha256-+t1N2GlIyPr7OHppP3h0TDQNYhrQCrBHc8fGyYq2AiM=";
+    hash = "sha256-qlF+dp2umL3H7l/9R5kbpFLOsaZnl5V2WjLaeXMzGls=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/pkg-about/default.nix b/pkgs/development/python-modules/pkg-about/default.nix
index 58d217546d34..f357ec7d6732 100644
--- a/pkgs/development/python-modules/pkg-about/default.nix
+++ b/pkgs/development/python-modules/pkg-about/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "pkg-about";
-  version = "1.2.11";
+  version = "1.3.7";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "pkg_about";
     inherit version;
-    hash = "sha256-fm/b4Vm7YGTq+BXVltwRz42qXYULXL9KBCINB8mMuWI=";
+    hash = "sha256-xYGDHXLRWxqA7dxs4hhh+qsEcdNwSh1jvAhpyUdbJOg=";
   };
 
   # tox is listed in build requirements but not actually used to build
diff --git a/pkgs/development/python-modules/playwrightcapture/default.nix b/pkgs/development/python-modules/playwrightcapture/default.nix
index a89e5305117c..bd8e3cd62cca 100644
--- a/pkgs/development/python-modules/playwrightcapture/default.nix
+++ b/pkgs/development/python-modules/playwrightcapture/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "playwrightcapture";
-  version = "1.29.1";
+  version = "1.31.7";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "Lookyloo";
     repo = "PlaywrightCapture";
     tag = "v${version}";
-    hash = "sha256-n2lVP+oThZ2hRVOadudaaNFU2KI14rrkG7ipJ0vrj20=";
+    hash = "sha256-+yVAqDbPuul9pZaEiABFVEmWbfq89SyCULHYRWpXKNc=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/poetry-dynamic-versioning/default.nix b/pkgs/development/python-modules/poetry-dynamic-versioning/default.nix
index fe2bec35dc90..c5910a0d79dd 100644
--- a/pkgs/development/python-modules/poetry-dynamic-versioning/default.nix
+++ b/pkgs/development/python-modules/poetry-dynamic-versioning/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "poetry-dynamic-versioning";
-  version = "1.7.0";
+  version = "1.9.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "mtkennerly";
     repo = "poetry-dynamic-versioning";
     tag = "v${version}";
-    hash = "sha256-V5UuODRwm829c1KPdQm9oqeN6YdcCo1ODDsEHbm4e/Y=";
+    hash = "sha256-SKVx20RrwhCpdDIc2Pu1oFaXWe2d2GnbJGUX7KqMvo0=";
   };
 
   nativeBuildInputs = [ poetry-core ];
diff --git a/pkgs/development/python-modules/pook/default.nix b/pkgs/development/python-modules/pook/default.nix
index 66d6e2da8db8..ba904883f880 100644
--- a/pkgs/development/python-modules/pook/default.nix
+++ b/pkgs/development/python-modules/pook/default.nix
@@ -1,6 +1,7 @@
 {
   lib,
   buildPythonPackage,
+  falcon,
   fetchFromGitHub,
   furl,
   hatchling,
@@ -9,33 +10,31 @@
   pytest-httpbin,
   pytest-pook,
   pytestCheckHook,
-  pythonOlder,
   xmltodict,
 }:
 
 buildPythonPackage rec {
   pname = "pook";
-  version = "2.1.3";
+  version = "2.1.4";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchFromGitHub {
     owner = "h2non";
     repo = "pook";
     tag = "v${version}";
-    hash = "sha256-DDHaKsye28gxyorILulrLRBy/B9zV673jeVZ85uPZAo=";
+    hash = "sha256-z0QaMdsX2xLXICgQwnlUD2KsgCn0jB4wO83+6O4B3D8=";
   };
 
-  nativeBuildInputs = [ hatchling ];
+  build-system = [ hatchling ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     furl
     jsonschema
     xmltodict
   ];
 
   nativeCheckInputs = [
+    falcon
     pytest-asyncio
     pytest-httpbin
     pytest-pook
@@ -62,8 +61,8 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "HTTP traffic mocking and testing";
     homepage = "https://github.com/h2non/pook";
-    changelog = "https://github.com/h2non/pook/blob/v${version}/History.rst";
-    license = with licenses; [ mit ];
+    changelog = "https://github.com/h2non/pook/blob/v${src.tag}/History.rst";
+    license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
 }
diff --git a/pkgs/development/python-modules/portalocker/default.nix b/pkgs/development/python-modules/portalocker/default.nix
index cb01274dfea1..4c45509dc8de 100644
--- a/pkgs/development/python-modules/portalocker/default.nix
+++ b/pkgs/development/python-modules/portalocker/default.nix
@@ -14,19 +14,21 @@
   # tests
   pygments,
   pytest-cov-stub,
+  pytest-rerunfailures,
+  pytest-timeout,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "portalocker";
-  version = "3.1.1";
+  version = "3.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-7CD23aKtnOifo5ml8x9PFJX1FZWPDLfKZUPO97tadJ4=";
+    hash = "sha256-HzAClWpUqMNzBYbFx3vxj65BSeB+rxwp/D+vTVo/iaw=";
   };
 
   nativeBuildInputs = [
@@ -39,6 +41,8 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     pygments
     pytest-cov-stub
+    pytest-rerunfailures
+    pytest-timeout
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/portend/default.nix b/pkgs/development/python-modules/portend/default.nix
index 35bf5d1a8be5..6411878265e2 100644
--- a/pkgs/development/python-modules/portend/default.nix
+++ b/pkgs/development/python-modules/portend/default.nix
@@ -10,19 +10,23 @@
 
 buildPythonPackage rec {
   pname = "portend";
-  version = "3.2.0";
-  format = "pyproject";
+  version = "3.2.1";
+  pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-UlCjUsGclZ12fKyHi4Kdk+XcdiWlFDOZoqANxmKP+3I=";
+    hash = "sha256-qp1Aqx+eFL231AH0IhDfNdAXybl5kbrrGFaM7fuMZIk=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml;
+  '';
 
-  propagatedBuildInputs = [ tempora ];
+  build-system = [ setuptools-scm ];
+
+  dependencies = [ tempora ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/preggy/default.nix b/pkgs/development/python-modules/preggy/default.nix
index 4281e6de0edf..db95ae127885 100644
--- a/pkgs/development/python-modules/preggy/default.nix
+++ b/pkgs/development/python-modules/preggy/default.nix
@@ -2,27 +2,30 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
   six,
   unidecode,
-  pytestCheckHook,
+  pytest8_3CheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "preggy";
   version = "1.4.4";
-  format = "setuptools";
-
-  propagatedBuildInputs = [
-    six
-    unidecode
-  ];
-  nativeCheckInputs = [ pytestCheckHook ];
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
     sha256 = "25ba803afde4f35ef543a60915ced2e634926235064df717c3cb3e4e3eb4670c";
   };
 
+  build-system = [ setuptools ];
+
+  dependencies = [
+    six
+    unidecode
+  ];
+  nativeCheckInputs = [ pytest8_3CheckHook ];
+
   meta = with lib; {
     description = "Assertion library for Python";
     homepage = "http://heynemann.github.io/preggy/";
diff --git a/pkgs/development/python-modules/primer3/default.nix b/pkgs/development/python-modules/primer3/default.nix
index 12fe9407cb73..2c93e066ad14 100644
--- a/pkgs/development/python-modules/primer3/default.nix
+++ b/pkgs/development/python-modules/primer3/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "primer3";
-  version = "2.1.0";
+  version = "2.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "libnano";
     repo = "primer3-py";
     tag = "v${version}";
-    hash = "sha256-Kp4JH57gEdj7SzY+7XGBzGloWuTSwUQRBK9QbgXQfUE=";
+    hash = "sha256-GrVYYjS/+LZScZETfk7YcSy2yrWc3SPumXvyQeEpFUg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/progress/default.nix b/pkgs/development/python-modules/progress/default.nix
index 20c2954a10f7..26edbf0a1d58 100644
--- a/pkgs/development/python-modules/progress/default.nix
+++ b/pkgs/development/python-modules/progress/default.nix
@@ -2,21 +2,26 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
   python,
 }:
 
 buildPythonPackage rec {
-  version = "1.6";
-  format = "setuptools";
+  version = "1.6.1";
   pname = "progress";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "c9c86e98b5c03fa1fe11e3b67c1feda4788b8d0fe7336c2ff7d5644ccfba34cd";
+    hash = "sha256-wbpxn4Ys6IUjKnWeq0eXH+dN/Hu3arilHvWUC601CGw=";
   };
 
+  build-system = [ setuptools ];
+
   checkPhase = ''
+    runHook preCheck
     ${python.interpreter} test_progress.py
+    runHook postCheck
   '';
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/prometheus-client/default.nix b/pkgs/development/python-modules/prometheus-client/default.nix
index 1efd9a4d9a1c..88e9c6fff24e 100644
--- a/pkgs/development/python-modules/prometheus-client/default.nix
+++ b/pkgs/development/python-modules/prometheus-client/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "prometheus-client";
-  version = "0.22.0";
+  version = "0.22.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "prometheus";
     repo = "client_python";
     tag = "v${version}";
-    hash = "sha256-JLkDFciDsfjfrA7BiIq3js+UtLRA/lzcdFvqPhUJyB8=";
+    hash = "sha256-DEuIoVpRDJTd9qXBeHa5jrBscmGgosCKAluqCuUBzuU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/promise/default.nix b/pkgs/development/python-modules/promise/default.nix
index ee6df45657a9..d182becf95be 100644
--- a/pkgs/development/python-modules/promise/default.nix
+++ b/pkgs/development/python-modules/promise/default.nix
@@ -46,6 +46,11 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # Failed: async def functions are not natively supported
+    "test_issue_9_safe"
+  ];
+
   disabledTestPaths = [ "tests/test_benchmark.py" ];
 
   pythonImportsCheck = [ "promise" ];
diff --git a/pkgs/development/python-modules/propcache/default.nix b/pkgs/development/python-modules/propcache/default.nix
index 67fbfd5422a2..b07c062c96fb 100644
--- a/pkgs/development/python-modules/propcache/default.nix
+++ b/pkgs/development/python-modules/propcache/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "propcache";
-  version = "0.3.1";
+  version = "0.3.2";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "aio-libs";
     repo = "propcache";
     tag = "v${version}";
-    hash = "sha256-sVZsa6WkG1wUj9G+1vzgT+HT4fWLBqRNmn5nlEj5J0w=";
+    hash = "sha256-G8SLIZaJUu3uwyFicrQF+PjKp3vsUh/pNUsmDpnnAAg=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/protego/default.nix b/pkgs/development/python-modules/protego/default.nix
index 5823c42526c0..372715859af0 100644
--- a/pkgs/development/python-modules/protego/default.nix
+++ b/pkgs/development/python-modules/protego/default.nix
@@ -2,14 +2,14 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  hatchling,
   pytestCheckHook,
   pythonOlder,
-  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "protego";
-  version = "0.4.0";
+  version = "0.5.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,10 +18,10 @@ buildPythonPackage rec {
     owner = "scrapy";
     repo = "protego";
     tag = version;
-    hash = "sha256-2vyETqRYeof5CzOCXCGUYb5vSyV/eT5+lm2GNWiuaF0=";
+    hash = "sha256-70/DPap3FgLfh4ldYSve5Pt8o7gM1lME/OmRFaew/38=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [ hatchling ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/prov/default.nix b/pkgs/development/python-modules/prov/default.nix
index f4606cda7f48..ef7361277d5e 100644
--- a/pkgs/development/python-modules/prov/default.nix
+++ b/pkgs/development/python-modules/prov/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "prov";
-  version = "2.0.1";
+  version = "2.1.1";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-DiOMFAXRpVxyvTmzttc9b3q/2dCn+rLsBpOhmimlYX8=";
+    hash = "sha256-fQErFk9bu0LhGO2dJXiKsBLQkIK3Iryd1OgRownqV/U=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/proxy-py/default.nix b/pkgs/development/python-modules/proxy-py/default.nix
index fd4779abeab3..7011a191dc07 100644
--- a/pkgs/development/python-modules/proxy-py/default.nix
+++ b/pkgs/development/python-modules/proxy-py/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "proxy-py";
-  version = "2.4.9";
+  version = "2.4.10";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -32,7 +32,7 @@ buildPythonPackage rec {
     owner = "abhinavsingh";
     repo = "proxy.py";
     tag = "v${version}";
-    hash = "sha256-q7GfPVPtlH5XlOFDEHUwLYp5ZSBF4lrZOU2AsktHlcI=";
+    hash = "sha256-47Qt8J60QFfHUSquD17xMfl+wBTsSimaPSRvS/sSPMI=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pscript/default.nix b/pkgs/development/python-modules/pscript/default.nix
index 499f479b4d88..c9673c7eb900 100644
--- a/pkgs/development/python-modules/pscript/default.nix
+++ b/pkgs/development/python-modules/pscript/default.nix
@@ -2,15 +2,15 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  flit-core,
   pytestCheckHook,
   nodejs,
   pythonOlder,
-  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "pscript";
-  version = "0.7.7";
+  version = "0.8.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -19,10 +19,10 @@ buildPythonPackage rec {
     owner = "flexxui";
     repo = "pscript";
     tag = "v${version}";
-    hash = "sha256-AhVI+7FiWyH+DfAXnau4aAHJAJtsWEpmnU90ey2z35o=";
+    hash = "sha256-pqjig3dFJ4zfpor6TT6fiBMS7lAtJE/bAYbzl46W/YY=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [ flit-core ];
 
   nativeCheckInputs = [
     pytestCheckHook
@@ -44,7 +44,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python to JavaScript compiler";
     homepage = "https://pscript.readthedocs.io";
-    changelog = "https://github.com/flexxui/pscript/blob/v${version}/docs/releasenotes.rst";
+    changelog = "https://github.com/flexxui/pscript/blob/${src.tag}/docs/releasenotes.rst";
     license = licenses.bsd2;
     maintainers = with maintainers; [ matthiasbeyer ];
   };
diff --git a/pkgs/development/python-modules/psycopg/default.nix b/pkgs/development/python-modules/psycopg/default.nix
index d1812889b663..d50a40738b06 100644
--- a/pkgs/development/python-modules/psycopg/default.nix
+++ b/pkgs/development/python-modules/psycopg/default.nix
@@ -4,7 +4,6 @@
   buildPythonPackage,
   fetchFromGitHub,
   fetchurl,
-  pythonOlder,
   replaceVars,
 
   # build
@@ -69,6 +68,9 @@ let
     # move into source root after patching
     postPatch = ''
       cd psycopg_c
+
+      substituteInPlace pyproject.toml \
+        --replace-fail "Cython >= 3.0.0, < 3.1.0" "Cython"
     '';
 
     nativeBuildInputs = [
@@ -116,9 +118,7 @@ in
 
 buildPythonPackage rec {
   inherit pname version src;
-  format = "pyproject";
-
-  disabled = pythonOlder "3.7";
+  pyproject = true;
 
   outputs = [
     "out"
@@ -143,15 +143,15 @@ buildPythonPackage rec {
   '';
 
   nativeBuildInputs = [
-    furo
     setuptools
-    shapely
   ]
   # building the docs fails with the following error when cross compiling
   #  AttributeError: module 'psycopg_c.pq' has no attribute '__impl__'
   ++ lib.optionals (stdenv.hostPlatform == stdenv.buildPlatform) [
+    furo
     sphinx-autodoc-typehints
     sphinxHook
+    shapely
   ];
 
   propagatedBuildInputs = [
@@ -209,9 +209,6 @@ buildPythonPackage rec {
     # Mypy typing test
     "tests/test_typing.py"
     "tests/crdb/test_typing.py"
-    # https://github.com/psycopg/psycopg/pull/915
-    "tests/test_notify.py"
-    "tests/test_notify_async.py"
   ];
 
   pytestFlags = [
diff --git a/pkgs/development/python-modules/psygnal/default.nix b/pkgs/development/python-modules/psygnal/default.nix
index f5fe9fff8ded..40191587278b 100644
--- a/pkgs/development/python-modules/psygnal/default.nix
+++ b/pkgs/development/python-modules/psygnal/default.nix
@@ -7,6 +7,7 @@
   mypy-extensions,
   numpy,
   pydantic,
+  pytest-asyncio,
   pytestCheckHook,
   pythonOlder,
   toolz,
@@ -17,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "psygnal";
-  version = "0.13.0";
+  version = "0.14.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
@@ -26,7 +27,7 @@ buildPythonPackage rec {
     owner = "pyapp-kit";
     repo = "psygnal";
     tag = "v${version}";
-    hash = "sha256-ZEN8S2sI1usXl5A1Ow1+l4BBB6qNnlVt/nvFtAX4maY=";
+    hash = "sha256-RQ53elonwvna5UDVell3JI1dcZSMHREyB51r+ddsW2M=";
   };
 
   build-system = [
@@ -42,6 +43,7 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     numpy
     pydantic
+    pytest-asyncio
     pytestCheckHook
     toolz
     wrapt
diff --git a/pkgs/development/python-modules/ptpython/default.nix b/pkgs/development/python-modules/ptpython/default.nix
index 3ec9a6f76d76..2d6a19ca74ef 100644
--- a/pkgs/development/python-modules/ptpython/default.nix
+++ b/pkgs/development/python-modules/ptpython/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "ptpython";
-  version = "3.0.29";
+  version = "3.0.30";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-udYlGDrvk6Zz/DLL4cH8r1FBLnpPGVkFIc2syt8lGG4=";
+    hash = "sha256-UaB/m46/hDWlqusigxzKSlLocCl3GiY33ydjx509h3Y=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pulumi-aws/default.nix b/pkgs/development/python-modules/pulumi-aws/default.nix
index 30983db1986b..5d4928938c26 100644
--- a/pkgs/development/python-modules/pulumi-aws/default.nix
+++ b/pkgs/development/python-modules/pulumi-aws/default.nix
@@ -12,7 +12,7 @@
 buildPythonPackage rec {
   pname = "pulumi-aws";
   # Version is independent of pulumi's.
-  version = "6.66.3";
+  version = "7.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "pulumi";
     repo = "pulumi-aws";
     tag = "v${version}";
-    hash = "sha256-BPL4B0KwXQld+/aPTJKhsFMPEbJByccTj+Zs70b8O6A=";
+    hash = "sha256-fYcApSVMBSlw9YMf1J5PRma8GXPCGKDpnPd1BXJh5EE=";
   };
 
   sourceRoot = "${src.name}/sdk/python";
diff --git a/pkgs/development/python-modules/puremagic/default.nix b/pkgs/development/python-modules/puremagic/default.nix
index accf500a91fa..51cdabd8e0d6 100644
--- a/pkgs/development/python-modules/puremagic/default.nix
+++ b/pkgs/development/python-modules/puremagic/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "puremagic";
-  version = "1.28";
+  version = "1.30";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "cdgriffith";
     repo = "puremagic";
     tag = version;
-    hash = "sha256-a7jRQUSbH3E6eJiXNKr4ikdSXRZ6+/csl/EMiKXMzmk=";
+    hash = "sha256-k2xrcML8XxI9cMTQTv0pDLkOrmEr5mbDnVsyWuD1rEc=";
   };
 
   build-system = [ setuptools ];
@@ -30,7 +30,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Implementation of magic file detection";
     homepage = "https://github.com/cdgriffith/puremagic";
-    changelog = "https://github.com/cdgriffith/puremagic/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/cdgriffith/puremagic/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ globin ];
   };
diff --git a/pkgs/development/python-modules/py-ccm15/default.nix b/pkgs/development/python-modules/py-ccm15/default.nix
index aa4ccf9928e2..14008ca3f28d 100644
--- a/pkgs/development/python-modules/py-ccm15/default.nix
+++ b/pkgs/development/python-modules/py-ccm15/default.nix
@@ -9,9 +9,9 @@
   aiohttp,
 }:
 
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "py-ccm15";
-  version = "0.0.9";
+  version = "0.1.2";
   pyproject = true;
 
   src = fetchFromGitHub {
@@ -20,8 +20,8 @@ buildPythonPackage {
     # Upstream does not have a tag for this release and this is the exact release commit
     # Therefore it should not be marked unstable
     # upstream issue: https://github.com/ocalvo/py-ccm15/issues/10
-    rev = "3891d840e69d241c85bf9486e7fe0bb3c7443980";
-    hash = "sha256-I2/AdG07PAvuC8rQKOIAUk7u3pJpANMaFpvEsejWeBU=";
+    tag = "v${version}";
+    hash = "sha256-QfitJzCFk0gnlcCvvKzuI4fS1lVm79q4xaDZFKKt458=";
   };
 
   build-system = [ setuptools ];
@@ -34,9 +34,15 @@ buildPythonPackage {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
+  disabledTests = [
+    # tests use outdated function signature
+    "test_async_set_state"
+  ];
+
   pythonImportsCheck = [ "ccm15" ];
 
   meta = {
+    changelog = "https://github.com/ocalvo/py-ccm15/releases/tag/${src.tag}";
     description = "Python Library to access a Midea CCM15 data converter";
     homepage = "https://github.com/ocalvo/py-ccm15";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/py-multiaddr/default.nix b/pkgs/development/python-modules/py-multiaddr/default.nix
index 49ba5ea55091..92bc2ac0987d 100644
--- a/pkgs/development/python-modules/py-multiaddr/default.nix
+++ b/pkgs/development/python-modules/py-multiaddr/default.nix
@@ -14,15 +14,15 @@
 
 buildPythonPackage rec {
   pname = "py-multiaddr";
-  version = "0.0.9";
+  version = "0.0.10";
   format = "setuptools";
   disabled = pythonOlder "3.5";
 
   src = fetchFromGitHub {
     owner = "multiformats";
     repo = "py-multiaddr";
-    rev = "v${version}";
-    hash = "sha256-cGM7iYQPP+UOkbTxRhzuED0pkcydFCO8vpx9wTc0/HI=";
+    tag = "v${version}";
+    hash = "sha256-N46D2H3RG6rtdBrSyDjh8UxD+Ph/FXEa4FcEI2uz4y8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/py-serializable/default.nix b/pkgs/development/python-modules/py-serializable/default.nix
index 6cbf0a63200d..7b48a7c04950 100644
--- a/pkgs/development/python-modules/py-serializable/default.nix
+++ b/pkgs/development/python-modules/py-serializable/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "py-serializable";
-  version = "1.1.2";
+  version = "2.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "madpah";
     repo = "serializable";
     tag = "v${version}";
-    hash = "sha256-2A+QjokZ7gtgstclZ7PFSPymYjQYKsLVXy9xbFOfxLo=";
+    hash = "sha256-nou1/80t9d2iKOdZZbcN4SI3dlvuC8T55KMCP/cDEEU=";
   };
 
   build-system = [ poetry-core ];
@@ -36,7 +36,7 @@ buildPythonPackage rec {
     xmldiff
   ];
 
-  pythonImportsCheck = [ "serializable" ];
+  pythonImportsCheck = [ "py_serializable" ];
 
   disabledTests = [
     # AssertionError: '<ns0[155 chars]itle>The Phoenix
@@ -47,7 +47,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Library to aid with serialisation and deserialisation to/from JSON and XML";
     homepage = "https://github.com/madpah/serializable";
-    changelog = "https://github.com/madpah/serializable/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/madpah/serializable/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/py7zr/default.nix b/pkgs/development/python-modules/py7zr/default.nix
index 9e986b4cae52..0a96e999ec49 100644
--- a/pkgs/development/python-modules/py7zr/default.nix
+++ b/pkgs/development/python-modules/py7zr/default.nix
@@ -15,31 +15,25 @@
   texttable,
   py-cpuinfo,
   pytest-benchmark,
+  pytest-httpserver,
   pytest-remotedata,
   pytest-timeout,
   pytestCheckHook,
+  requests,
 }:
 
 buildPythonPackage rec {
   pname = "py7zr";
-  version = "0.22.0";
+  version = "1.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "miurahr";
     repo = "py7zr";
     tag = "v${version}";
-    hash = "sha256-YR2cuHZWwqrytidAMbNvRV1/N4UZG8AMMmzcTcG9FvY=";
+    hash = "sha256-uV4zBQZlHfHgM/NiVSjI5I9wJRk9i4ihJn4B2R6XRuM=";
   };
 
-  postPatch =
-    # Replace inaccessible mirror (qt.mirrors.tds.net):
-    # upstream PR: https://github.com/miurahr/py7zr/pull/637
-    ''
-      substituteInPlace tests/test_concurrent.py \
-        --replace-fail 'http://qt.mirrors.tds.net/qt/' 'https://download.qt.io/'
-    '';
-
   build-system = [
     setuptools
     setuptools-scm
@@ -60,9 +54,11 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     py-cpuinfo
     pytest-benchmark
+    pytest-httpserver
     pytest-remotedata
     pytest-timeout
     pytestCheckHook
+    requests
   ];
 
   pytestFlags = [ "--benchmark-disable" ];
diff --git a/pkgs/development/python-modules/pyTelegramBotAPI/default.nix b/pkgs/development/python-modules/pyTelegramBotAPI/default.nix
index 550809f9150d..ee3cc7a354e8 100644
--- a/pkgs/development/python-modules/pyTelegramBotAPI/default.nix
+++ b/pkgs/development/python-modules/pyTelegramBotAPI/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "pytelegrambotapi";
-  version = "4.27.0";
+  version = "4.28.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "eternnoir";
     repo = "pyTelegramBotAPI";
     tag = version;
-    hash = "sha256-UozVUdqNxxwWTBoq7ekr8ZX5KdkvQj+SiNSwebVXblI=";
+    hash = "sha256-T6OzlL+IzQr38sjE8DhVO3NN3apgHzJQjGx3No8kRNA=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/pyaml/default.nix b/pkgs/development/python-modules/pyaml/default.nix
index e7902b1d72a4..7088ee5ae36b 100644
--- a/pkgs/development/python-modules/pyaml/default.nix
+++ b/pkgs/development/python-modules/pyaml/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "pyaml";
-  version = "25.5.0";
+  version = "25.7.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-V5lWDHscna81p6RTX1PiwwMj90y9fLTy5xWxbdaBpYo=";
+    hash = "sha256-4ROmTsFogb8rCS4r64S33PG9mAlq0X9fFOj7eCp12Zs=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyaprilaire/default.nix b/pkgs/development/python-modules/pyaprilaire/default.nix
index 40f41216094f..b28342011276 100644
--- a/pkgs/development/python-modules/pyaprilaire/default.nix
+++ b/pkgs/development/python-modules/pyaprilaire/default.nix
@@ -5,7 +5,7 @@
   pytestCheckHook,
   crc,
   setuptools,
-  pytest-asyncio,
+  pytest-asyncio_0,
 }:
 
 buildPythonPackage rec {
@@ -28,7 +28,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     pytestCheckHook
-    pytest-asyncio
+    pytest-asyncio_0
   ];
 
   meta = {
diff --git a/pkgs/development/python-modules/pyatv/default.nix b/pkgs/development/python-modules/pyatv/default.nix
index 767b8c5eb067..c3266fffe3a4 100644
--- a/pkgs/development/python-modules/pyatv/default.nix
+++ b/pkgs/development/python-modules/pyatv/default.nix
@@ -13,7 +13,7 @@
   pydantic,
   pyfakefs,
   pytest-aiohttp,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-httpserver,
   pytest-timeout,
   pytestCheckHook,
@@ -79,8 +79,8 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     deepdiff
     pyfakefs
-    pytest-aiohttp
-    pytest-asyncio
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
+    pytest-asyncio_0
     pytest-httpserver
     pytest-timeout
     pytestCheckHook
diff --git a/pkgs/development/python-modules/pyaussiebb/default.nix b/pkgs/development/python-modules/pyaussiebb/default.nix
index 78875a02e780..190bc5f67288 100644
--- a/pkgs/development/python-modules/pyaussiebb/default.nix
+++ b/pkgs/development/python-modules/pyaussiebb/default.nix
@@ -4,32 +4,24 @@
   buildPythonPackage,
   fetchFromGitHub,
   loguru,
+  pdm-backend,
   pydantic,
-  poetry-core,
-  pythonOlder,
   requests,
 }:
 
 buildPythonPackage rec {
   pname = "pyaussiebb";
-  version = "0.1.5";
+  version = "0.1.6";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchFromGitHub {
     owner = "yaleman";
     repo = "aussiebb";
     tag = "v${version}";
-    hash = "sha256-ejaHweoRNrJJq6XGeTrENco8SPwwu6rSpGzksu0CsCY=";
+    hash = "sha256-GD04Bq+uJs2JuTjtnGh6QKD4uFXwmGcOMB1Hu9yBlkI=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace-fail 'requests = "^2.27.1"' 'requests = "*"'
-  '';
-
-  build-system = [ poetry-core ];
+  build-system = [ pdm-backend ];
 
   dependencies = [
     aiohttp
@@ -46,7 +38,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Module for interacting with the Aussie Broadband APIs";
     homepage = "https://github.com/yaleman/aussiebb";
-    changelog = "https://github.com/yaleman/pyaussiebb/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/yaleman/pyaussiebb/blob/${src.tag}/CHANGELOG.md";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/pybalboa/default.nix b/pkgs/development/python-modules/pybalboa/default.nix
index e00186809690..5ad085c44975 100644
--- a/pkgs/development/python-modules/pybalboa/default.nix
+++ b/pkgs/development/python-modules/pybalboa/default.nix
@@ -4,7 +4,7 @@
   fetchFromGitHub,
   poetry-core,
   poetry-dynamic-versioning,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
 }:
 
@@ -27,10 +27,15 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # async def functions are not natively supported.
+    "test_cancel_task"
+  ];
+
   pythonImportsCheck = [ "pybalboa" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pyblu/default.nix b/pkgs/development/python-modules/pyblu/default.nix
index 5ba66443feda..5dd61924f9e5 100644
--- a/pkgs/development/python-modules/pyblu/default.nix
+++ b/pkgs/development/python-modules/pyblu/default.nix
@@ -40,7 +40,7 @@ buildPythonPackage rec {
   ];
 
   meta = {
-    changelog = "https://github.com/LouisChrist/pyblu/releases/tag/v${version}";
+    changelog = "https://github.com/LouisChrist/pyblu/releases/tag/${src.tag}";
     description = "BluOS API client";
     homepage = "https://github.com/LouisChrist/pyblu";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/pycairo/default.nix b/pkgs/development/python-modules/pycairo/default.nix
index 883a879d3b1f..e3ee49b20113 100644
--- a/pkgs/development/python-modules/pycairo/default.nix
+++ b/pkgs/development/python-modules/pycairo/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "pycairo";
-  version = "1.27.0";
+  version = "1.28.0";
 
   disabled = pythonOlder "3.6";
 
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "pygobject";
     repo = "pycairo";
     tag = "v${version}";
-    hash = "sha256-P9AC8+WlokAxoy6KTJqAz7kOYK/FQVjIKWuj8jQw2OA=";
+    hash = "sha256-OAF1Yv9aoUctklGzH2xM+cVu5csyEnX2AV9n0OeoFUw=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pycasbin/default.nix b/pkgs/development/python-modules/pycasbin/default.nix
index 40129fd8e1fb..eaad1ff8be75 100644
--- a/pkgs/development/python-modules/pycasbin/default.nix
+++ b/pkgs/development/python-modules/pycasbin/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pycasbin";
-  version = "1.45.0";
+  version = "1.48.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "casbin";
     repo = "pycasbin";
     tag = "v${version}";
-    hash = "sha256-pErgGW9zSux2ki7WItHjkMncC2kiuxcRkcGmCtFUtCo=";
+    hash = "sha256-jfWWlLkJernwnXIj6jTcGNZleLZ6axtFPoOprOQktfU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pychromecast/default.nix b/pkgs/development/python-modules/pychromecast/default.nix
index 0a5f43eeb186..e9134566063a 100644
--- a/pkgs/development/python-modules/pychromecast/default.nix
+++ b/pkgs/development/python-modules/pychromecast/default.nix
@@ -25,7 +25,8 @@ buildPythonPackage rec {
 
   postPatch = ''
     substituteInPlace pyproject.toml \
-       --replace-fail "setuptools>=65.6,<78.0" setuptools
+       --replace-fail "setuptools>=65.6,<78.0" setuptools \
+       --replace-fail "wheel>=0.37.1,<0.46.0" wheel
   '';
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pycocotools/default.nix b/pkgs/development/python-modules/pycocotools/default.nix
index 304b04df00be..c5bfa9e4d0a0 100644
--- a/pkgs/development/python-modules/pycocotools/default.nix
+++ b/pkgs/development/python-modules/pycocotools/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "pycocotools";
-  version = "2.0.9";
+  version = "2.0.10";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-uoLlUGcKoRgqkR+z5fDoM0VDIERDhwe9UsJRnNoWhyo=";
+    hash = "sha256-ekdgnN78leXhUTE8fZOmHPBuFdQse6mbYB47wPns4uE=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pycomposefile/default.nix b/pkgs/development/python-modules/pycomposefile/default.nix
index b907155a4195..e8eb77a8ec00 100644
--- a/pkgs/development/python-modules/pycomposefile/default.nix
+++ b/pkgs/development/python-modules/pycomposefile/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pycomposefile";
-  version = "0.0.32";
+  version = "0.0.34";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-o1XVFcTE/5LuWhZZDeizZ6O+SCcEZZLQhw+MtqxKbjQ=";
+    hash = "sha256-kzqTtDn4aSiCtNUP90ThKj2ZYEAGjpZlGjfdhCEmpQg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pycrdt-websocket/default.nix b/pkgs/development/python-modules/pycrdt-websocket/default.nix
index 7a3a2362de00..573c4917bbc5 100644
--- a/pkgs/development/python-modules/pycrdt-websocket/default.nix
+++ b/pkgs/development/python-modules/pycrdt-websocket/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "pycrdt-websocket";
-  version = "0.15.5";
+  version = "0.16.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jupyter-server";
     repo = "pycrdt-websocket";
-    tag = "v${version}";
-    hash = "sha256-piNd85X5YsTAOC9frYQRDyb/DPfzZicIPJ+bEVzgOsU=";
+    tag = version;
+    hash = "sha256-Qux8IxJR1nGbdpGz7RZBKJjYN0qfwfEpd2UDlduOna0=";
   };
 
   build-system = [ hatchling ];
@@ -77,7 +77,7 @@ buildPythonPackage rec {
   meta = {
     description = "WebSocket Connector for pycrdt";
     homepage = "https://github.com/jupyter-server/pycrdt-websocket";
-    changelog = "https://github.com/jupyter-server/pycrdt-websocket/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/jupyter-server/pycrdt-websocket/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.mit;
     teams = [ lib.teams.jupyter ];
   };
diff --git a/pkgs/development/python-modules/pydaikin/default.nix b/pkgs/development/python-modules/pydaikin/default.nix
index 877da83d4cba..66342b59f205 100644
--- a/pkgs/development/python-modules/pydaikin/default.nix
+++ b/pkgs/development/python-modules/pydaikin/default.nix
@@ -46,6 +46,12 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  disabledTests = [
+    # Failed: async def functions are not natively supported.
+    "test_power_sensors"
+    "test_device_factory"
+  ];
+
   pythonImportsCheck = [ "pydaikin" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pydal/default.nix b/pkgs/development/python-modules/pydal/default.nix
index ab696abe6d18..eb890f9ea391 100644
--- a/pkgs/development/python-modules/pydal/default.nix
+++ b/pkgs/development/python-modules/pydal/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "pydal";
-  version = "20250607.2";
+  version = "20250629.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Zr1d6kCwAyhjeV2tQ+n9y9x80yD/Atb6TJq7AnRz+PQ=";
+    hash = "sha256-P65iULncYasN7ahwD75czGlwum+N4D1Y0WCd6XpBXSk=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pydevccu/default.nix b/pkgs/development/python-modules/pydevccu/default.nix
index 3441611d1f0b..ace4e1f48a14 100644
--- a/pkgs/development/python-modules/pydevccu/default.nix
+++ b/pkgs/development/python-modules/pydevccu/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "pydevccu";
-  version = "0.1.11";
+  version = "0.1.14";
   pyproject = true;
 
   disabled = pythonOlder "3.13";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "SukramJ";
     repo = "pydevccu";
     tag = version;
-    hash = "sha256-Ar9KNOkiy60HTGKz8br701v8xF470dz1jv8sp/CZbpw=";
+    hash = "sha256-UiMY9qz2b8Mdi8L9mB5jcC7fF8/YUYYiNbaWsXze0vA=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pydmd/default.nix b/pkgs/development/python-modules/pydmd/default.nix
index b5041e8e73ff..d05de4c77997 100644
--- a/pkgs/development/python-modules/pydmd/default.nix
+++ b/pkgs/development/python-modules/pydmd/default.nix
@@ -23,7 +23,7 @@
 
 buildPythonPackage rec {
   pname = "pydmd";
-  version = "2025.06.01";
+  version = "2025.08.01";
   pyproject = true;
 
   src = fetchFromGitHub {
diff --git a/pkgs/development/python-modules/pydot/default.nix b/pkgs/development/python-modules/pydot/default.nix
index eb16cd4481dd..d71957a1a989 100644
--- a/pkgs/development/python-modules/pydot/default.nix
+++ b/pkgs/development/python-modules/pydot/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "pydot";
-  version = "4.0.0";
+  version = "4.0.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EvFkkzN8reL3YxuHyMzSmbouJR8+5dBzKgWN8oh6/pc=";
+    hash = "sha256-whSPaBxKM+CL8OJqnl+OQJmoLg4qBoCY8yzoZXc2StU=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pyee/default.nix b/pkgs/development/python-modules/pyee/default.nix
index a0942645a94b..34144038080b 100644
--- a/pkgs/development/python-modules/pyee/default.nix
+++ b/pkgs/development/python-modules/pyee/default.nix
@@ -3,7 +3,7 @@
   buildPythonPackage,
   fetchPypi,
   mock,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-trio,
   pytestCheckHook,
   pythonOlder,
@@ -36,7 +36,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     mock
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-trio
     pytestCheckHook
     twisted
diff --git a/pkgs/development/python-modules/pyephember2/default.nix b/pkgs/development/python-modules/pyephember2/default.nix
index 35af2f5e8da1..fd4ee04d2abd 100644
--- a/pkgs/development/python-modules/pyephember2/default.nix
+++ b/pkgs/development/python-modules/pyephember2/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pyephember2";
-  version = "0.4.12";
+  version = "2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "roberty99";
     repo = "pyephember2";
-    tag = version;
-    hash = "sha256-R63Ts+1620QQOFF8o2/6CFNZi5jAeWTQkElgqZhNA7c=";
+    tag = "Release${version}";
+    hash = "sha256-BxDXjrXPx6UNWo7mGLzbIGtenE0B10x39iCUCzGFAr0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyexcel-xls/default.nix b/pkgs/development/python-modules/pyexcel-xls/default.nix
index 81bcc8ade772..eede60aa59a9 100644
--- a/pkgs/development/python-modules/pyexcel-xls/default.nix
+++ b/pkgs/development/python-modules/pyexcel-xls/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "pyexcel-xls";
-  version = "0.7.0";
+  version = "0.7.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pyexcel";
     repo = "pyexcel-xls";
-    rev = "v${version}";
-    hash = "sha256-wxsx/LfeBxi+NnHxfxk3svzsBcdwOiLQ1660eoHfmLg=";
+    tag = "v${version}";
+    hash = "sha256-+iwdMSGUsUbWFO4s4+3Zf+47J9bzFffWthZoeThT8f0=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/pyfakefs/default.nix b/pkgs/development/python-modules/pyfakefs/default.nix
index 99379e07d034..82b7874d2667 100644
--- a/pkgs/development/python-modules/pyfakefs/default.nix
+++ b/pkgs/development/python-modules/pyfakefs/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "pyfakefs";
-  version = "5.8.0";
+  version = "5.9.2";
   pyproject = true;
 
   disabled = pythonOlder "3.5";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-flRX7jzGcGnTzvbieCJ+z8gL+2HpJbwKTTsK8y0cmc4=";
+    hash = "sha256-ZsXGzNQJe0hPh4L5pQeP7gUz1GXg2cr1lMkVfVQ4JVM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pygelf/default.nix b/pkgs/development/python-modules/pygelf/default.nix
index bb5735771c74..975644043daf 100644
--- a/pkgs/development/python-modules/pygelf/default.nix
+++ b/pkgs/development/python-modules/pygelf/default.nix
@@ -9,13 +9,13 @@
 }:
 buildPythonPackage rec {
   pname = "pygelf";
-  version = "0.4.2";
+  version = "0.4.3";
   pyproject = true;
 
   src = fetchPypi {
     pname = "pygelf";
     inherit version;
-    hash = "sha256-0LuPRf9kipoYdxP0oFwJ9oX8uK3XsEu3Rx8gBxvRGq0=";
+    hash = "sha256-jtlyVjvjyPFoSD8B2/UitrxpeVnJej9IgTJLP3ljiRE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pygeocodio/default.nix b/pkgs/development/python-modules/pygeocodio/default.nix
index 6f23fa579352..cf06e8687ca9 100644
--- a/pkgs/development/python-modules/pygeocodio/default.nix
+++ b/pkgs/development/python-modules/pygeocodio/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "pygeocodio";
-  version = "1.4.0";
+  version = "2.0.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "bennylope";
     repo = "pygeocodio";
     tag = "v${version}";
-    hash = "sha256-s6sY+iHuWv7+6ydxDWoN9eKiAXw0jeASWiMtz12TTHo=";
+    hash = "sha256-4jT/PX+jvJx81eaSXTsb/vLNbv4dNNVgeYrE7QwGlL8=";
   };
 
   build-system = [
@@ -43,7 +43,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python wrapper for the Geocodio geolocation service API";
     downloadPage = "https://github.com/bennylope/pygeocodio/tree/master";
-    changelog = "https://github.com/bennylope/pygeocodio/blob/v${version}/HISTORY.rst";
+    changelog = "https://github.com/bennylope/pygeocodio/blob/${src.tag}/HISTORY.rst";
     homepage = "https://www.geocod.io/docs/#introduction";
     license = with lib.licenses; [ bsd3 ];
     maintainers = with lib.maintainers; [ ethancedwards8 ];
diff --git a/pkgs/development/python-modules/pygit2/default.nix b/pkgs/development/python-modules/pygit2/default.nix
index 3e62e5dd42f7..efee1979e1a3 100644
--- a/pkgs/development/python-modules/pygit2/default.nix
+++ b/pkgs/development/python-modules/pygit2/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "pygit2";
-  version = "1.18.0";
+  version = "1.18.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-+9AdBKTSziiaqgLPhYBDZ5vw3R+YVca4jtlTgsH1ARo=";
+    hash = "sha256-hOBvw3CLjTvu787GN/Ydh96zgnLnSH6hxSkXQYT/9sQ=";
   };
 
   preConfigure = lib.optionalString stdenv.hostPlatform.isDarwin ''
diff --git a/pkgs/development/python-modules/pygitguardian/default.nix b/pkgs/development/python-modules/pygitguardian/default.nix
index 323aa1d69b07..c759e67bbf07 100644
--- a/pkgs/development/python-modules/pygitguardian/default.nix
+++ b/pkgs/development/python-modules/pygitguardian/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "pygitguardian";
-  version = "1.23.0";
+  version = "1.24.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "GitGuardian";
     repo = "py-gitguardian";
     tag = "v${version}";
-    hash = "sha256-vpz7HBxRu1srqe+EBnjwNJ7xJ1TMrOIXBulPjDTTk3k=";
+    hash = "sha256-9Zk2XpMS8WhCOGYwtUgsjWKbUhmtKOgVWyqskLJ8DOw=";
   };
 
   pythonRelaxDeps = [
@@ -56,7 +56,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Library to access the GitGuardian API";
     homepage = "https://github.com/GitGuardian/py-gitguardian";
-    changelog = "https://github.com/GitGuardian/py-gitguardian/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/GitGuardian/py-gitguardian/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/pygithub/default.nix b/pkgs/development/python-modules/pygithub/default.nix
index 86cc0e436660..38777b3b88ba 100644
--- a/pkgs/development/python-modules/pygithub/default.nix
+++ b/pkgs/development/python-modules/pygithub/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "pygithub";
-  version = "2.6.1";
+  version = "2.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "PyGithub";
     repo = "PyGithub";
     tag = "v${version}";
-    hash = "sha256-CfAgN5vxHbVyDSeP0KR1QFnL6gDQsd46Q0zosr0ALqM=";
+    hash = "sha256-meWuetrgE2ks3BEQedrvrfYEVAJsFGgYO6GXPRUcJv4=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pyglm/default.nix b/pkgs/development/python-modules/pyglm/default.nix
index 6dd07457ebd2..41d7277b1ac2 100644
--- a/pkgs/development/python-modules/pyglm/default.nix
+++ b/pkgs/development/python-modules/pyglm/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "pyglm";
-  version = "2.7.3";
+  version = "2.8.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Zuzu-Typ";
     repo = "PyGLM";
     tag = version;
-    hash = "sha256-5NXueFZ4+hIP1xd30Dt7sv/oxEqh6ejJoJtQv2rpGyQ=";
+    hash = "sha256-oLPZ6sCIAt12iolcSBNXEjbHGE4ou+dgoFhB400pyRk=";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/development/python-modules/pyinfra/default.nix b/pkgs/development/python-modules/pyinfra/default.nix
index 88bd5a77e525..7276fa1f1b47 100644
--- a/pkgs/development/python-modules/pyinfra/default.nix
+++ b/pkgs/development/python-modules/pyinfra/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "pyinfra";
-  version = "3.2";
+  version = "3.4.1";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "Fizzadar";
     repo = "pyinfra";
     tag = "v${version}";
-    hash = "sha256-l0RD4lOLjzM9Ydf7vJr+PXpUGsVdAZN/dTUFJ3fo078=";
+    hash = "sha256-7bNkDm5SyIgVkrGQ95/q7AiY/JnxtWx+jkDO/rJQ2WQ=";
   };
 
   build-system = [ setuptools ];
@@ -66,7 +66,7 @@ buildPythonPackage rec {
     '';
     homepage = "https://pyinfra.com";
     downloadPage = "https://pyinfra.com/Fizzadar/pyinfra/releases";
-    changelog = "https://github.com/Fizzadar/pyinfra/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/Fizzadar/pyinfra/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ totoroot ];
     mainProgram = "pyinfra";
diff --git a/pkgs/development/python-modules/pyinstaller-hooks-contrib/default.nix b/pkgs/development/python-modules/pyinstaller-hooks-contrib/default.nix
index 4747662e6dcf..fefa0bc3cdf5 100644
--- a/pkgs/development/python-modules/pyinstaller-hooks-contrib/default.nix
+++ b/pkgs/development/python-modules/pyinstaller-hooks-contrib/default.nix
@@ -7,14 +7,14 @@
 
 buildPythonPackage rec {
   pname = "pyinstaller-hooks-contrib";
-  version = "2025.5";
+  version = "2025.8";
 
   pyproject = true;
 
   src = fetchPypi {
     pname = "pyinstaller_hooks_contrib";
     inherit version;
-    hash = "sha256-cHOGdwuP4GbASq0YpxvEg8eyXhi0dQp1aZn32iqzGYI=";
+    hash = "sha256-NAKtQd/ptREK8TRCLjf8XUIbo0LGy5gL1nyzC3QVZBw=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyinstaller-versionfile/default.nix b/pkgs/development/python-modules/pyinstaller-versionfile/default.nix
index 9659cd9bae80..2962ea7b3004 100644
--- a/pkgs/development/python-modules/pyinstaller-versionfile/default.nix
+++ b/pkgs/development/python-modules/pyinstaller-versionfile/default.nix
@@ -9,15 +9,15 @@
 
 buildPythonPackage rec {
   pname = "pyinstaller-versionfile";
-  version = "2.1.1";
+  version = "3.0.1";
 
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "DudeNr33";
     repo = "pyinstaller-versionfile";
-    rev = "v${version}";
-    hash = "sha256-lz1GuiXU+r8sMld5SsG3qS+FOsWfbvkQmO2bxAR3XcY=";
+    tag = "v${version}";
+    hash = "sha256-UNrXP5strO6LIkIM3etBo1+Vm+1lR5wF0VfKtZYRoYc=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyinstaller/default.nix b/pkgs/development/python-modules/pyinstaller/default.nix
index 207e4deae50e..b80a5945fbc8 100644
--- a/pkgs/development/python-modules/pyinstaller/default.nix
+++ b/pkgs/development/python-modules/pyinstaller/default.nix
@@ -25,12 +25,12 @@
 
 buildPythonPackage rec {
   pname = "pyinstaller";
-  version = "6.14.2";
+  version = "6.15.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-FCzOBxnnkxXwzCZADC5cRdm2sX5+BJH+5ESp+PFvSRc=";
+    hash = "sha256-pI/EZE7kqiqio157UfSW+PvX7s9qIVBka78WE60HvC0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pykaleidescape/default.nix b/pkgs/development/python-modules/pykaleidescape/default.nix
index e461e8e66167..64b495fe92f8 100644
--- a/pkgs/development/python-modules/pykaleidescape/default.nix
+++ b/pkgs/development/python-modules/pykaleidescape/default.nix
@@ -4,7 +4,7 @@
   buildPythonPackage,
   dnspython,
   fetchFromGitHub,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pythonAtLeast,
   pythonOlder,
@@ -33,7 +33,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/pykcs11/default.nix b/pkgs/development/python-modules/pykcs11/default.nix
index fe3cd809bcca..7edb41e9dcab 100644
--- a/pkgs/development/python-modules/pykcs11/default.nix
+++ b/pkgs/development/python-modules/pykcs11/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "pykcs11";
-  version = "1.5.17";
+  version = "1.5.18";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-e2Z+lZ+gtq0HULA+IIGgWcvppieJdmFD5Q+QmIoziZQ=";
+    hash = "sha256-Ev2HizaYIdgMG+ihQMheig+xNY/Kq6ZspmhpITaS8ic=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pykdtree/default.nix b/pkgs/development/python-modules/pykdtree/default.nix
index a1958b26bb2f..1e311b580ebf 100644
--- a/pkgs/development/python-modules/pykdtree/default.nix
+++ b/pkgs/development/python-modules/pykdtree/default.nix
@@ -17,12 +17,12 @@
 
 buildPythonPackage rec {
   pname = "pykdtree";
-  version = "1.4.1";
+  version = "1.4.2";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EISP9qxzMraOZb+MLolme2tisHWq0nI0d0Smm/HIrX4=";
+    hash = "sha256-vSuWehalUQ76hz7lLZWdDYITicx0m7UWc65oMW7rZfU=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pykka/default.nix b/pkgs/development/python-modules/pykka/default.nix
index 209624aa801f..de877d4e3442 100644
--- a/pkgs/development/python-modules/pykka/default.nix
+++ b/pkgs/development/python-modules/pykka/default.nix
@@ -3,30 +3,25 @@
   buildPythonPackage,
   pythonOlder,
   fetchFromGitHub,
-  poetry-core,
+  hatchling,
   pydantic,
   pytestCheckHook,
   pytest-mock,
-  typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "pykka";
-  version = "4.1.1";
-  format = "pyproject";
-
-  disabled = pythonOlder "3.8";
+  version = "4.2.0";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "jodal";
     repo = "pykka";
     tag = "v${version}";
-    hash = "sha256-n9TgXcmUEIQdqtrY+9T+EtPys+7OzXCemRwNPj1xPDw=";
+    hash = "sha256-cxW6xKG0x7pPXvCanh0ZNMYRSdnCf8JrnJbjYgDUQSI=";
   };
 
-  build-system = [ poetry-core ];
-
-  dependencies = lib.optionals (pythonOlder "3.10") [ typing-extensions ];
+  build-system = [ hatchling ];
 
   nativeCheckInputs = [
     pydantic
diff --git a/pkgs/development/python-modules/pylibacl/default.nix b/pkgs/development/python-modules/pylibacl/default.nix
index 878c91a71bb8..ef94e00dacb6 100644
--- a/pkgs/development/python-modules/pylibacl/default.nix
+++ b/pkgs/development/python-modules/pylibacl/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "pylibacl";
-  version = "0.7.2";
+  version = "0.7.3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-VsFehn/kxyRTG7+XQHWJy7+NvShajYT+fsyQ/DIjeNc=";
+    hash = "sha256-nZ/7WA4MWC1d5ZgIf3X2lARYsjgQxhVSkUPGGxcr+SI=";
   };
 
   # ERROR: testExtended (tests.test_acls.AclExtensions)
diff --git a/pkgs/development/python-modules/pylink-square/default.nix b/pkgs/development/python-modules/pylink-square/default.nix
index b23aca51e529..d2e365e86b50 100644
--- a/pkgs/development/python-modules/pylink-square/default.nix
+++ b/pkgs/development/python-modules/pylink-square/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pylink-square";
-  version = "1.4.0";
+  version = "1.6.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "square";
     repo = "pylink";
     tag = "v${version}";
-    hash = "sha256-Fjulh2wmcVO+/608uTO10orRz8Pq0I+ZhJ8zMa3YFC0=";
+    hash = "sha256-rkkdnpkl9UHcBDjp6lsFXR1zNn7tH1KeTQ7wV+yJ3m0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pymavlink/default.nix b/pkgs/development/python-modules/pymavlink/default.nix
index fda09c5f6a49..6ac68fcf73f5 100644
--- a/pkgs/development/python-modules/pymavlink/default.nix
+++ b/pkgs/development/python-modules/pymavlink/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "pymavlink";
-  version = "2.4.43";
+  version = "2.4.49";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-IcShujVcBXQtKvQVEFdtbgjboNd2AunqY1MxzQdV7nY=";
+    hash = "sha256-188Q1VktA4oYqpcnERd+u4i+IUPvzCWN9jCwUT6dosI=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pymongo/default.nix b/pkgs/development/python-modules/pymongo/default.nix
index ce570a857265..4f747ea9a321 100644
--- a/pkgs/development/python-modules/pymongo/default.nix
+++ b/pkgs/development/python-modules/pymongo/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "pymongo";
-  version = "4.13.0";
+  version = "4.13.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "pymongo";
-    hash = "sha256-kqBuNwnjx+UIINNS09TmABVAa8ummAiTfawqbSIib94=";
+    hash = "sha256-D2TGRpwjYpYubOlyWK4Tkau6FWapU6SSVi0pJLRIFcI=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pymoo/default.nix b/pkgs/development/python-modules/pymoo/default.nix
index 82d137ae4592..350e7b5144d3 100644
--- a/pkgs/development/python-modules/pymoo/default.nix
+++ b/pkgs/development/python-modules/pymoo/default.nix
@@ -29,20 +29,20 @@ let
   pymoo_data = fetchFromGitHub {
     owner = "anyoptimization";
     repo = "pymoo-data";
-    rev = "33f61a78182ceb211b95381dd6d3edee0d2fc0f3";
+    tag = "33f61a78182ceb211b95381dd6d3edee0d2fc0f3";
     hash = "sha256-iGWPepZw3kJzw5HKV09CvemVvkvFQ38GVP+BAryBSs0=";
   };
 in
 buildPythonPackage rec {
   pname = "pymoo";
-  version = "0.6.1.3";
+  version = "0.6.1.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "anyoptimization";
     repo = "pymoo";
     tag = version;
-    hash = "sha256-CbeJwv51lu4cABgGieqy/8DCDJCb8wOPPVqUHk8Jb7E=";
+    hash = "sha256-IRNYluK6fO1cQq0u9dIJYnI5HWqtTPLXARXNoHa4F0I=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pymssql/default.nix b/pkgs/development/python-modules/pymssql/default.nix
index 25e904ea2490..959d7b69e6da 100644
--- a/pkgs/development/python-modules/pymssql/default.nix
+++ b/pkgs/development/python-modules/pymssql/default.nix
@@ -16,12 +16,12 @@
 
 buildPythonPackage rec {
   pname = "pymssql";
-  version = "2.3.4";
+  version = "2.3.7";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-EXyC16qQIRcaqb6YNoR1UZ8z2cMgc83Pmw12Ixq8ZDY=";
+    hash = "sha256-Xm15x7HOxArr7EsJnG5EXMqsJFGeXnZ7SaTm9IwIflA=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pymunk/default.nix b/pkgs/development/python-modules/pymunk/default.nix
index d69adbdf3c63..bc25bb966d19 100644
--- a/pkgs/development/python-modules/pymunk/default.nix
+++ b/pkgs/development/python-modules/pymunk/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "pymunk";
-  version = "7.0.1";
+  version = "7.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-lqOOgSP02J+IILQ2QPH2I9aETx+X7qCcRmDwMXgKn/g=";
+    hash = "sha256-8wRYlyYTJbs+iShEAt1DuQjQpYcdwgEFl+NrQwnwIps=";
   };
 
   nativeBuildInputs = [ cffi ];
diff --git a/pkgs/development/python-modules/pymupdf/default.nix b/pkgs/development/python-modules/pymupdf/default.nix
index 9cd4b74ee0ed..15a7a69ba947 100644
--- a/pkgs/development/python-modules/pymupdf/default.nix
+++ b/pkgs/development/python-modules/pymupdf/default.nix
@@ -4,7 +4,6 @@
   buildPythonPackage,
   pythonOlder,
   fetchFromGitHub,
-  fetchpatch,
   python,
   toPythonModule,
 
@@ -46,7 +45,7 @@ let
 in
 buildPythonPackage rec {
   pname = "pymupdf";
-  version = "1.26.1";
+  version = "1.26.3";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -55,7 +54,7 @@ buildPythonPackage rec {
     owner = "pymupdf";
     repo = "PyMuPDF";
     tag = version;
-    hash = "sha256-Z+TO4MaLFmgNSRMTltY77bHnA5RHc4Ii45sDjJsFZto=";
+    hash = "sha256-djTbALLvdX2jOTGgoyUIBhiqJ6KzM+Dkb4M7d2eVoPM=";
   };
 
   # swig is not wrapped as Python package
@@ -127,6 +126,11 @@ buildPythonPackage rec {
     "test_open2"
   ];
 
+  disabledTestPaths = [
+    # mad about markdown table formatting
+    "tests/test_tables.py::test_markdown"
+  ];
+
   pythonImportsCheck = [
     "pymupdf"
     "fitz"
diff --git a/pkgs/development/python-modules/pymupdf4llm/default.nix b/pkgs/development/python-modules/pymupdf4llm/default.nix
index c2fc51f7be96..d1eb118e26b7 100644
--- a/pkgs/development/python-modules/pymupdf4llm/default.nix
+++ b/pkgs/development/python-modules/pymupdf4llm/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "pymupdf4llm";
-  version = "0.0.25";
+  version = "0.0.27";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pymupdf";
     repo = "RAG";
     tag = "v${version}";
-    hash = "sha256-20upIcCoUB8zjW/qBvA3kFxJ6jcdXV3ohkurMmnlMkc=";
+    hash = "sha256-rezdDsjNCDetvrX3uvykYuL/y40MZnr0fFMvQY3JRr0=";
   };
 
   sourceRoot = "${src.name}/pymupdf4llm";
diff --git a/pkgs/development/python-modules/pynamodb/default.nix b/pkgs/development/python-modules/pynamodb/default.nix
index c79ffdb9f624..862971e81f33 100644
--- a/pkgs/development/python-modules/pynamodb/default.nix
+++ b/pkgs/development/python-modules/pynamodb/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "pynamodb";
-  version = "6.0.2";
+  version = "6.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "pynamodb";
     repo = "PynamoDB";
     tag = version;
-    hash = "sha256-i4cO1fzERKHJW2Ym0ogc2YID3IXVpBVDE33UumxvvHE=";
+    hash = "sha256-i4oxZO3gBVc2PMFSISeytaO8YrzYR9YuUMxrEqrg2c4=";
   };
 
   build-system = [ setuptools ];
@@ -69,7 +69,7 @@ buildPythonPackage rec {
       verbose. PynamoDB presents you with a simple, elegant API.
     '';
     homepage = "http://jlafon.io/pynamodb.html";
-    changelog = "https://github.com/pynamodb/PynamoDB/releases/tag/${version}";
+    changelog = "https://github.com/pynamodb/PynamoDB/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/pyngrok/default.nix b/pkgs/development/python-modules/pyngrok/default.nix
index d20b3a5a8335..6866321a7ec3 100644
--- a/pkgs/development/python-modules/pyngrok/default.nix
+++ b/pkgs/development/python-modules/pyngrok/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pyngrok";
-  version = "7.2.12";
+  version = "7.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HM5NeFYZuAZLyn5vbIo0VNaaql/P8PNb0FqoElTOEv8=";
+    hash = "sha256-8iQOSbneybJ+ugDxREzTzOesRdG8xJOpt27mPC2piCw=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pynitrokey/default.nix b/pkgs/development/python-modules/pynitrokey/default.nix
index 1586313a8823..187d08594334 100644
--- a/pkgs/development/python-modules/pynitrokey/default.nix
+++ b/pkgs/development/python-modules/pynitrokey/default.nix
@@ -4,33 +4,27 @@
   fetchPypi,
   installShellFiles,
   libnitrokey,
-  flit-core,
-  certifi,
+  poetry-core,
   cffi,
   click,
   cryptography,
-  ecdsa,
   fido2,
+  hidapi,
   intelhex,
   nkdfu,
-  python-dateutil,
   pyusb,
   requests,
   tqdm,
   tlv8,
-  typing-extensions,
-  click-aliases,
   semver,
   nethsm,
-  importlib-metadata,
   nitrokey,
   pyscard,
-  asn1crypto,
 }:
 
 let
   pname = "pynitrokey";
-  version = "0.8.5";
+  version = "0.10.0";
   mainProgram = "nitropy";
 in
 
@@ -40,49 +34,42 @@ buildPythonPackage {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-mPhH4IdpKKA9d8sJOGMWpGerzki5qZHFHe4u4ao2RgE=";
+    hash = "sha256-Kr6VtBADLvXUva7csbsHujGzBfRG1atJLF7qbIWmToM=";
   };
 
   nativeBuildInputs = [ installShellFiles ];
 
-  build-system = [ flit-core ];
+  build-system = [ poetry-core ];
 
   dependencies = [
-    certifi
     cffi
     click
     cryptography
-    ecdsa
     fido2
+    hidapi
     intelhex
     nkdfu
-    python-dateutil
+    nitrokey
     pyusb
     requests
     tqdm
     tlv8
-    typing-extensions
-    click-aliases
     semver
     nethsm
-    importlib-metadata
-    nitrokey
-    pyscard
-    asn1crypto
   ];
 
-  pythonRelaxDeps = true;
+  optional-dependencies = {
+    pcsc = [
+      pyscard
+    ];
+  };
 
-  # pythonRelaxDepsHook runs in postBuild so cannot be used
-  pypaBuildFlags = [ "--skip-dependency-check" ];
+  pythonRelaxDeps = true;
 
   # libnitrokey is not propagated to users of the pynitrokey Python package.
   # It is only usable from the wrapped bin/nitropy
   makeWrapperArgs = [ "--set LIBNK_PATH ${lib.makeLibraryPath [ libnitrokey ]}" ];
 
-  # no tests
-  doCheck = false;
-
   pythonImportsCheck = [ "pynitrokey" ];
 
   postInstall = ''
diff --git a/pkgs/development/python-modules/pyocd/default.nix b/pkgs/development/python-modules/pyocd/default.nix
index 35d09a9373a0..a6ba9cd6c745 100644
--- a/pkgs/development/python-modules/pyocd/default.nix
+++ b/pkgs/development/python-modules/pyocd/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "pyocd";
-  version = "0.36.0";
+  version = "0.38.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pyocd";
     repo = "pyOCD";
     tag = "v${version}";
-    hash = "sha256-CSdVWDiSe+xd0MzD9tsKs3DklNjnhchYFuI3Udi0O20=";
+    hash = "sha256-4fdVcTNH125e74S3mA/quuDun17ntGCazX6CV+obUGc=";
   };
 
   patches = [
@@ -81,7 +81,7 @@ buildPythonPackage rec {
   nativeCheckInputs = [ pytestCheckHook ];
 
   meta = with lib; {
-    changelog = "https://github.com/pyocd/pyOCD/releases/tag/v${version}";
+    changelog = "https://github.com/pyocd/pyOCD/releases/tag/${src.tag}";
     description = "Python library for programming and debugging Arm Cortex-M microcontrollers";
     downloadPage = "https://github.com/pyocd/pyOCD";
     homepage = "https://pyocd.io";
diff --git a/pkgs/development/python-modules/pyogrio/default.nix b/pkgs/development/python-modules/pyogrio/default.nix
index 8c3ed073d9f0..330fcd31225c 100644
--- a/pkgs/development/python-modules/pyogrio/default.nix
+++ b/pkgs/development/python-modules/pyogrio/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "pyogrio";
-  version = "0.11.0";
+  version = "0.11.1";
   pyproject = true;
   disabled = pythonOlder "3.9";
 
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "geopandas";
     repo = "pyogrio";
     tag = "v${version}";
-    hash = "sha256-3XrP3/sqGRtA+sfaoOV/ByGAtfpGZB5RYRr5lyYZUj0=";
+    hash = "sha256-F6XfkihN3k2xquYS8jJMlqtLXzaTORaduJ2Q9LhSQGM=";
   };
 
   postPatch = ''
@@ -66,7 +66,7 @@ buildPythonPackage rec {
   meta = {
     description = "Vectorized spatial vector file format I/O using GDAL/OGR";
     homepage = "https://pyogrio.readthedocs.io/";
-    changelog = "https://github.com/geopandas/pyogrio/blob/${src.rev}/CHANGES.md";
+    changelog = "https://github.com/geopandas/pyogrio/blob/${src.tag}/CHANGES.md";
     license = lib.licenses.mit;
     teams = [ lib.teams.geospatial ];
   };
diff --git a/pkgs/development/python-modules/pypdf/default.nix b/pkgs/development/python-modules/pypdf/default.nix
index 42ad1e795efa..f3757208596f 100644
--- a/pkgs/development/python-modules/pypdf/default.nix
+++ b/pkgs/development/python-modules/pypdf/default.nix
@@ -27,7 +27,7 @@
 
 buildPythonPackage rec {
   pname = "pypdf";
-  version = "5.7.0";
+  version = "5.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -38,7 +38,7 @@ buildPythonPackage rec {
     tag = version;
     # fetch sample files used in tests
     fetchSubmodules = true;
-    hash = "sha256-O1kV9VKbI3MFsWvr3jrDg9rJ0G+92ny0v7g4Xx/1ytM=";
+    hash = "sha256-WM7eAXDdrnbm1olS+3WPF6FhTUbdIHojtGbJdPHvxv4=";
   };
 
   outputs = [
diff --git a/pkgs/development/python-modules/pyprecice/default.nix b/pkgs/development/python-modules/pyprecice/default.nix
index 48bf841129f8..2e8cea421b3a 100644
--- a/pkgs/development/python-modules/pyprecice/default.nix
+++ b/pkgs/development/python-modules/pyprecice/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "pyprecice";
-  version = "3.1.2";
+  version = "3.2.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "precice";
     repo = "python-bindings";
     tag = "v${version}";
-    hash = "sha256-/atuMJVgvY4kgvrB+LuQZmJuSK4O8TJdguC7NCiRS2Y=";
+    hash = "sha256-8AM2wbPX54UaMO4MzLOV0TljLTAPOqR9gUbtT2McNjs=";
   };
 
   postPatch = ''
@@ -58,7 +58,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python language bindings for preCICE";
     homepage = "https://github.com/precice/python-bindings";
-    changelog = "https://github.com/precice/python-bindings/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/precice/python-bindings/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.lgpl3Only;
     maintainers = with lib.maintainers; [ Scriptkiddi ];
   };
diff --git a/pkgs/development/python-modules/pyqt-builder/default.nix b/pkgs/development/python-modules/pyqt-builder/default.nix
index a256e3faa146..442339d6e528 100644
--- a/pkgs/development/python-modules/pyqt-builder/default.nix
+++ b/pkgs/development/python-modules/pyqt-builder/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "pyqt-builder";
-  version = "1.18.1";
+  version = "1.18.2";
   pyproject = true;
 
   src = fetchPypi {
     pname = "pyqt_builder";
     inherit version;
-    hash = "sha256-P3o6JxWUeik6l1MKdv1Z8TCfy45XpYMPRcef5ySbOZg=";
+    hash = "sha256-Vt/qRhSEqHqPDIsCKRkN78Q21+xd5xEC4gs15WORgLw=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pyqt6-charts/default.nix b/pkgs/development/python-modules/pyqt6-charts/default.nix
index b50651cfcc2b..758ae6e93bfd 100644
--- a/pkgs/development/python-modules/pyqt6-charts/default.nix
+++ b/pkgs/development/python-modules/pyqt6-charts/default.nix
@@ -13,15 +13,15 @@
 
 buildPythonPackage rec {
   pname = "pyqt6-charts";
-  version = "6.8.0";
+  version = "6.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
-    pname = "PyQt6_Charts";
+    pname = "pyqt6_charts";
     inherit version;
-    hash = "sha256-+GcFuHQOMEFmfOIRrqogW3UOtrr0yQj04/bcjHINEPE=";
+    hash = "sha256-fvvpu35q1PmEUhGg7+D5HKXhT5Ni7RuoTVXyuFFQkfc=";
   };
 
   # fix include path and increase verbosity
diff --git a/pkgs/development/python-modules/pyqt6-webengine/default.nix b/pkgs/development/python-modules/pyqt6-webengine/default.nix
index e71d5128184f..8cafdbf543be 100644
--- a/pkgs/development/python-modules/pyqt6-webengine/default.nix
+++ b/pkgs/development/python-modules/pyqt6-webengine/default.nix
@@ -7,7 +7,6 @@
   sip,
   pyqt-builder,
   qt6Packages,
-  pythonOlder,
   pyqt6,
   python,
   mesa,
@@ -15,15 +14,13 @@
 
 buildPythonPackage rec {
   pname = "pyqt6-webengine";
-  version = "6.8.0";
+  version = "6.9.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchPypi {
-    pname = "PyQt6_WebEngine";
+    pname = "pyqt6_webengine";
     inherit version;
-    hash = "sha256-ZARepiK2pBiCwrGPVa6XFLhmCs/walTpEOtygiwvP/I=";
+    hash = "sha256-auU347vaBrjgZTXkhSKX4Lw7AFQ8R5KVQfzJsRmBqiU=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/pyrainbird/default.nix b/pkgs/development/python-modules/pyrainbird/default.nix
index ba3bd8c2eee9..b145c5bd469e 100644
--- a/pkgs/development/python-modules/pyrainbird/default.nix
+++ b/pkgs/development/python-modules/pyrainbird/default.nix
@@ -9,7 +9,7 @@
   parameterized,
   pycryptodome,
   pytest-aiohttp,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-cov-stub,
   pytest-golden,
   pytest-mock,
@@ -54,8 +54,8 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     freezegun
     parameterized
-    pytest-aiohttp
-    pytest-asyncio
+    (pytest-aiohttp.override { pytest-asyncio = pytest-asyncio_0; })
+    pytest-asyncio_0
     pytest-cov-stub
     pytest-golden
     pytest-mock
diff --git a/pkgs/development/python-modules/pyrate-limiter/default.nix b/pkgs/development/python-modules/pyrate-limiter/default.nix
index 45867188d206..3d15ac47bd26 100644
--- a/pkgs/development/python-modules/pyrate-limiter/default.nix
+++ b/pkgs/development/python-modules/pyrate-limiter/default.nix
@@ -4,8 +4,6 @@
   fetchFromGitHub,
   filelock,
   poetry-core,
-  postgresql,
-  postgresqlTestHook,
   psycopg,
   psycopg-pool,
   pytestCheckHook,
@@ -17,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "pyrate-limiter";
-  version = "3.7.0";
+  version = "3.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "vutran1710";
     repo = "PyrateLimiter";
     tag = "v${version}";
-    hash = "sha256-oNwFxH75TJm0iJSbLIO8SlIih72ImlHIhUW7GjOEorw=";
+    hash = "sha256-CAN3OWxXQaAzrh2q6z0OxPs4i02L/g2ISYFdUMHsHpg=";
   };
 
   postPatch = ''
@@ -51,12 +49,17 @@ buildPythonPackage rec {
   ]
   ++ lib.flatten (lib.attrValues optional-dependencies);
 
+  disabledTests = [
+    # hangs
+    "test_limiter_01"
+  ];
+
   pythonImportsCheck = [ "pyrate_limiter" ];
 
   meta = with lib; {
     description = "Python Rate-Limiter using Leaky-Bucket Algorimth Family";
     homepage = "https://github.com/vutran1710/PyrateLimiter";
-    changelog = "https://github.com/vutran1710/PyrateLimiter/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/vutran1710/PyrateLimiter/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ kranzes ];
   };
diff --git a/pkgs/development/python-modules/pyrevolve/default.nix b/pkgs/development/python-modules/pyrevolve/default.nix
index 0af3e6fe85ec..ba3b693a4ff8 100644
--- a/pkgs/development/python-modules/pyrevolve/default.nix
+++ b/pkgs/development/python-modules/pyrevolve/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "pyrevolve";
-  version = "2.2.4";
+  version = "2.2.6";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -21,8 +21,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "devitocodes";
     repo = pname;
-    rev = "refs/tags/v${version}";
-    hash = "sha256-fcIq/zuKO3W7K9N2E4f2Q6ZVcssZwN/n8o9cCOYmr3E=";
+    tag = "v${version}";
+    hash = "sha256-jjiFOlxXjaa4L4IEtojeeS0jx4GsftAeIGBpJLhUcY4=";
   };
 
   postPatch = ''
@@ -51,7 +51,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     homepage = "https://github.com/devitocodes/pyrevolve";
-    changelog = "https://github.com/devitocodes/pyrevolve/releases/tag/v${version}";
+    changelog = "https://github.com/devitocodes/pyrevolve/releases/tag/${src.tag}";
     description = "Python library to manage checkpointing for adjoints";
     license = licenses.epl10;
     maintainers = with maintainers; [ atila ];
diff --git a/pkgs/development/python-modules/pyroute2/default.nix b/pkgs/development/python-modules/pyroute2/default.nix
index 9b1fd1924ec4..b501bddec5df 100644
--- a/pkgs/development/python-modules/pyroute2/default.nix
+++ b/pkgs/development/python-modules/pyroute2/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "pyroute2";
-  version = "0.9.2";
+  version = "0.9.4";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "svinota";
     repo = "pyroute2";
     tag = version;
-    hash = "sha256-46QpFW9Yo1fHH9m8hxpdPRMBdiE6ptWAWRcaizKjBOw=";
+    hash = "sha256-D603ZrLbc/6REx6X0bMvZzeyo0fgTsFL7J+iRTiQLgQ=";
   };
 
   build-system = [ setuptools ];
@@ -46,7 +46,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python Netlink library";
     homepage = "https://github.com/svinota/pyroute2";
-    changelog = "https://github.com/svinota/pyroute2/blob/${version}/CHANGELOG.rst";
+    changelog = "https://github.com/svinota/pyroute2/blob/${src.tag}/CHANGELOG.rst";
     license = with licenses; [
       asl20 # or
       gpl2Plus
diff --git a/pkgs/development/python-modules/pyscard/default.nix b/pkgs/development/python-modules/pyscard/default.nix
index 6440d5839f9e..7f19bfb0c4c1 100644
--- a/pkgs/development/python-modules/pyscard/default.nix
+++ b/pkgs/development/python-modules/pyscard/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "pyscard";
-  version = "2.2.2";
+  version = "2.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "LudovicRousseau";
     repo = "pyscard";
     tag = version;
-    hash = "sha256-oaKmWLydwfWPnED11dbJKob9vxkl+pgOS0mvhL6XWrM=";
+    hash = "sha256-rz3m8eVbmJUMcQFuEMZwF3k/ES75KcNA8R+xix+Mgq8=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyshp/default.nix b/pkgs/development/python-modules/pyshp/default.nix
index 623fbebfb6d7..7811afc42edd 100644
--- a/pkgs/development/python-modules/pyshp/default.nix
+++ b/pkgs/development/python-modules/pyshp/default.nix
@@ -2,24 +2,24 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  hatchling,
   pytestCheckHook,
-  pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "pyshp";
-  version = "2.4.1";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.7";
+  version = "3.0.0";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "GeospatialPython";
     repo = "pyshp";
     tag = version;
-    hash = "sha256-NBZCqCbrCUIowj/EwWfC1vNC1fyNdg7EC06RRi6pul0=";
+    hash = "sha256-bN6n/cHuhoJPP2N9hcaPY87QgLNDSNdjHkpmyjO/+70=";
   };
 
+  build-system = [ hatchling ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "shapefile" ];
diff --git a/pkgs/development/python-modules/pysiaalarm/default.nix b/pkgs/development/python-modules/pysiaalarm/default.nix
index 2bb3e6611a82..1ec26947d356 100644
--- a/pkgs/development/python-modules/pysiaalarm/default.nix
+++ b/pkgs/development/python-modules/pysiaalarm/default.nix
@@ -6,7 +6,7 @@
   dataclasses-json,
   pycryptodome,
   setuptools-scm,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-cases,
   pytest-cov-stub,
   pytestCheckHook,
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-cases
     pytest-cov-stub
     pytestCheckHook
diff --git a/pkgs/development/python-modules/pyside6-fluent-widgets/default.nix b/pkgs/development/python-modules/pyside6-fluent-widgets/default.nix
index 475646e64114..bdc66df7c5ef 100644
--- a/pkgs/development/python-modules/pyside6-fluent-widgets/default.nix
+++ b/pkgs/development/python-modules/pyside6-fluent-widgets/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "pyside6-fluent-widgets";
-  version = "1.8.3";
+  version = "1.8.6";
   pyproject = true;
 
   src = fetchPypi {
     pname = "pyside6_fluent_widgets";
     inherit version;
-    hash = "sha256-A9lKRFGpfrWKGAKJS9ETIbSTBF/Ba6KUBBc4Pht2eBE=";
+    hash = "sha256-JuqZSYAGnmO/0GMIojpP3XB0mx4k/GecOkl/xsafOu8=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pysnooper/default.nix b/pkgs/development/python-modules/pysnooper/default.nix
index f8ce981e1d38..e9f9e7e86232 100644
--- a/pkgs/development/python-modules/pysnooper/default.nix
+++ b/pkgs/development/python-modules/pysnooper/default.nix
@@ -8,7 +8,7 @@
 
 buildPythonPackage rec {
   pname = "pysnooper";
-  version = "1.2.1";
+  version = "1.2.3";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -16,7 +16,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "PySnooper";
-    hash = "sha256-2DLd8myARAqUVrOmZNr/lX9zfnMTxAt2JQ69tczbajE=";
+    hash = "sha256-H6FCVESnr0UQiq7YYLXKi2KyW7olsLA3wFm6NT2PHnQ=";
   };
 
   nativeCheckInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/pyssim/default.nix b/pkgs/development/python-modules/pyssim/default.nix
index 1d49929d2710..6c08c68b5278 100644
--- a/pkgs/development/python-modules/pyssim/default.nix
+++ b/pkgs/development/python-modules/pyssim/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pyssim";
-  version = "0.7";
+  version = "0.7.1";
   pyproject = true;
 
   build-system = [
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "jterrace";
     repo = "pyssim";
     tag = "v${version}";
-    sha256 = "sha256-LDNIugQeRqNsAZ5ZxS/NxHokEAwefpfRutTRpR0IcXk=";
+    sha256 = "sha256-6393EATaXg12pYXPaHty+8LepUM6kgtZ0zSjZ1Izytg=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/pystemd/default.nix b/pkgs/development/python-modules/pystemd/default.nix
index f91803243e67..f3847e030065 100644
--- a/pkgs/development/python-modules/pystemd/default.nix
+++ b/pkgs/development/python-modules/pystemd/default.nix
@@ -14,12 +14,12 @@
 
 buildPythonPackage rec {
   pname = "pystemd";
-  version = "0.13.2";
+  version = "0.13.4";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Tc+ksTpVaFxJ09F8EGMeyhjDN3D2Yxb47yM3uJUcwUQ=";
+    hash = "sha256-8G1OWyGIGnyRAEkuYMzC9LZOULTWt3c8lAE9LG8aANs=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pysunspec2/default.nix b/pkgs/development/python-modules/pysunspec2/default.nix
index e3d321895db6..0e8f04916660 100644
--- a/pkgs/development/python-modules/pysunspec2/default.nix
+++ b/pkgs/development/python-modules/pysunspec2/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pysunspec2";
-  version = "1.2.1";
+  version = "1.3.2";
   pyproject = true;
 
   disabled = pythonOlder "3.5";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "sunspec";
     repo = "pysunspec2";
     tag = "v${version}";
-    hash = "sha256-N3Daa1l2uzRbj2GpgdulzNhqxtRLvxZuEHxlKMsAdso=";
+    hash = "sha256-a5dync6B0KA1Qus/3xfDzASirEh7yLuiUrQXB2jMVQw=";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/development/python-modules/pytapo/default.nix b/pkgs/development/python-modules/pytapo/default.nix
index e24e88f1e62f..852802ede046 100644
--- a/pkgs/development/python-modules/pytapo/default.nix
+++ b/pkgs/development/python-modules/pytapo/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "pytapo";
-  version = "3.3.48";
+  version = "3.3.49";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2MBolLmcInRO1EMYsV0cV4AsvS9cJATDiP5iBjPkrk0=";
+    hash = "sha256-urAGAcSoJ8AkHHIPEBEfk08Y34URVN/sX0N4WkIcUR4=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pytask/default.nix b/pkgs/development/python-modules/pytask/default.nix
index af475846e3a0..7e1ae80c0b6a 100644
--- a/pkgs/development/python-modules/pytask/default.nix
+++ b/pkgs/development/python-modules/pytask/default.nix
@@ -25,7 +25,7 @@
 }:
 buildPythonPackage rec {
   pname = "pytask";
-  version = "0.5.2";
+  version = "0.5.5";
   pyproject = true;
   disabled = pythonOlder "3.8";
 
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     owner = "pytask-dev";
     repo = "pytask";
     tag = "v${version}";
-    hash = "sha256-YJouWQ9Edj27nD72m7EDSH9TXcrsu6X+pGDo5fgGU5U=";
+    hash = "sha256-0e1pJzoszTW8n+uFJlEeYstvHf4v+I2Is7oEHJ1qV7o=";
   };
 
   build-system = [
@@ -79,7 +79,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Workflow management system that facilitates reproducible data analyses";
     homepage = "https://github.com/pytask-dev/pytask";
-    changelog = "https://github.com/pytask-dev/pytask/releases/tag/v${version}";
+    changelog = "https://github.com/pytask-dev/pytask/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ erooke ];
   };
diff --git a/pkgs/development/python-modules/pytensor/default.nix b/pkgs/development/python-modules/pytensor/default.nix
index 41a075b0229a..d5212c6533bd 100644
--- a/pkgs/development/python-modules/pytensor/default.nix
+++ b/pkgs/development/python-modules/pytensor/default.nix
@@ -33,7 +33,7 @@
 
 buildPythonPackage rec {
   pname = "pytensor";
-  version = "2.31.7";
+  version = "2.32.0";
   pyproject = true;
 
   src = fetchFromGitHub {
@@ -43,7 +43,7 @@ buildPythonPackage rec {
     postFetch = ''
       sed -i 's/git_refnames = "[^"]*"/git_refnames = " (tag: ${src.tag})"/' $out/pytensor/_version.py
     '';
-    hash = "sha256-FtB5DfeKHl3zlnDxsRn0rs08EJhPwVkXFBFLVA0k6oA=";
+    hash = "sha256-B72BZmSYl/trpgaTUXwjWo95gR90pNPcKgpnnOqP7Tg=";
   };
 
   build-system = [
@@ -167,7 +167,7 @@ buildPythonPackage rec {
     description = "Python library to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays";
     mainProgram = "pytensor-cache";
     homepage = "https://github.com/pymc-devs/pytensor";
-    changelog = "https://github.com/pymc-devs/pytensor/releases/tag/rel-${version}";
+    changelog = "https://github.com/pymc-devs/pytensor/releases/tag/rel-${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = with lib.maintainers; [
       bcdarwin
diff --git a/pkgs/development/python-modules/pytest-aiohttp/default.nix b/pkgs/development/python-modules/pytest-aiohttp/default.nix
index 5ef7d3de55ae..79df48b8250f 100644
--- a/pkgs/development/python-modules/pytest-aiohttp/default.nix
+++ b/pkgs/development/python-modules/pytest-aiohttp/default.nix
@@ -38,6 +38,8 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
+  pytestFlags = [ "-Wignore::pytest.PytestDeprecationWarning" ];
+
   meta = with lib; {
     homepage = "https://github.com/aio-libs/pytest-aiohttp/";
     changelog = "https://github.com/aio-libs/pytest-aiohttp/blob/${src.rev}/CHANGES.rst";
diff --git a/pkgs/development/python-modules/pytest-ansible/default.nix b/pkgs/development/python-modules/pytest-ansible/default.nix
index 226f7d8c0b6c..a0e5024d8c1f 100644
--- a/pkgs/development/python-modules/pytest-ansible/default.nix
+++ b/pkgs/development/python-modules/pytest-ansible/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-ansible";
-  version = "25.5.0";
+  version = "25.6.3";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "ansible";
     repo = "pytest-ansible";
     tag = "v${version}";
-    hash = "sha256-k6JFaB5VbUCwknN8SkNotdPRvSvW1tFmTx5p3hGfesg=";
+    hash = "sha256-NOvVzZCqbPbzbDgrs94qgS82c+8U+ysyH/LdQRsawt4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pytest-asyncio/0.nix b/pkgs/development/python-modules/pytest-asyncio/0.nix
new file mode 100644
index 000000000000..e6887edf85e1
--- /dev/null
+++ b/pkgs/development/python-modules/pytest-asyncio/0.nix
@@ -0,0 +1,48 @@
+{
+  lib,
+  buildPythonPackage,
+  callPackage,
+  fetchFromGitHub,
+  pytest,
+  setuptools-scm,
+}:
+
+buildPythonPackage rec {
+  pname = "pytest-asyncio";
+  version = "0.26.0"; # N.B.: when updating, tests bleak and aioesphomeapi tests
+  pyproject = true;
+
+  src = fetchFromGitHub {
+    owner = "pytest-dev";
+    repo = "pytest-asyncio";
+    tag = "v${version}";
+    hash = "sha256-GEhFwwQCXwtqfSiew/sOvJYV3JREqOGD4fQONlRR/Mw=";
+  };
+
+  outputs = [
+    "out"
+    "testout"
+  ];
+
+  build-system = [ setuptools-scm ];
+
+  buildInputs = [ pytest ];
+
+  postInstall = ''
+    mkdir $testout
+    cp -R tests $testout/tests
+  '';
+
+  doCheck = false;
+  passthru.tests.pytest = callPackage ./tests.nix { };
+
+  pythonImportsCheck = [ "pytest_asyncio" ];
+
+  meta = with lib; {
+    description = "Library for testing asyncio code with pytest";
+    homepage = "https://github.com/pytest-dev/pytest-asyncio";
+    changelog = "https://github.com/pytest-dev/pytest-asyncio/blob/${src.tag}/docs/reference/changelog.rst";
+    license = licenses.asl20;
+    maintainers = with maintainers; [ dotlambda ];
+  };
+}
diff --git a/pkgs/development/python-modules/pytest-asyncio/default.nix b/pkgs/development/python-modules/pytest-asyncio/default.nix
index e6887edf85e1..5ac0fdc37f87 100644
--- a/pkgs/development/python-modules/pytest-asyncio/default.nix
+++ b/pkgs/development/python-modules/pytest-asyncio/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "pytest-asyncio";
-  version = "0.26.0"; # N.B.: when updating, tests bleak and aioesphomeapi tests
+  version = "1.1.0"; # N.B.: when updating, tests bleak and aioesphomeapi tests
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pytest-dev";
     repo = "pytest-asyncio";
     tag = "v${version}";
-    hash = "sha256-GEhFwwQCXwtqfSiew/sOvJYV3JREqOGD4fQONlRR/Mw=";
+    hash = "sha256-+dLOzMPKI3nawfyZVZZ6hg6OkaEGZBp8oC5VIr7y0es=";
   };
 
   outputs = [
diff --git a/pkgs/development/python-modules/pytest-bdd/default.nix b/pkgs/development/python-modules/pytest-bdd/default.nix
index 0bd4ae71d8b0..df3b22f92089 100644
--- a/pkgs/development/python-modules/pytest-bdd/default.nix
+++ b/pkgs/development/python-modules/pytest-bdd/default.nix
@@ -7,7 +7,7 @@
   parse-type,
   poetry-core,
   pytest,
-  pytestCheckHook,
+  pytest7CheckHook,
   pythonOlder,
   typing-extensions,
 }:
@@ -37,7 +37,8 @@ buildPythonPackage rec {
     typing-extensions
   ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  # requires an update for pytest 8.4 compat
+  nativeCheckInputs = [ pytest7CheckHook ];
 
   preCheck = ''
     export PATH=$PATH:$out/bin
diff --git a/pkgs/development/python-modules/pytest-benchmark/default.nix b/pkgs/development/python-modules/pytest-benchmark/default.nix
index 7fca87e44542..1b14abd0d189 100644
--- a/pkgs/development/python-modules/pytest-benchmark/default.nix
+++ b/pkgs/development/python-modules/pytest-benchmark/default.nix
@@ -12,7 +12,6 @@
   pygal,
   pytest,
   pytestCheckHook,
-  pytest-xdist,
   pythonAtLeast,
   pythonOlder,
   setuptools,
@@ -56,7 +55,6 @@ buildPythonPackage rec {
     mercurial
     nbmake
     pytestCheckHook
-    pytest-xdist
   ]
   ++ lib.flatten (lib.attrValues optional-dependencies);
 
diff --git a/pkgs/development/python-modules/pytest-celery/default.nix b/pkgs/development/python-modules/pytest-celery/default.nix
index 9c3555f1012d..568159010c9d 100644
--- a/pkgs/development/python-modules/pytest-celery/default.nix
+++ b/pkgs/development/python-modules/pytest-celery/default.nix
@@ -5,12 +5,11 @@
   debugpy,
   docker,
   fetchFromGitHub,
+  kombu,
   poetry-core,
   psutil,
-  pytest-cov-stub,
   pytest-docker-tools,
   pytest,
-  pytestCheckHook,
   pythonOlder,
   setuptools,
   tenacity,
@@ -18,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-celery";
-  version = "1.1.3";
+  version = "1.2.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -27,7 +26,7 @@ buildPythonPackage rec {
     owner = "celery";
     repo = "pytest-celery";
     tag = "v${version}";
-    hash = "sha256-TUtKfGOxvVkiMhsUqyNDK08OTuzzKHrBiPU4JCKsIKM=";
+    hash = "sha256-E8GO/00IC9kUvQLZmTFaK4FFQ7d+/tw/kVTQbAqRRRM=";
   };
 
   postPatch = ''
@@ -46,8 +45,10 @@ buildPythonPackage rec {
   buildInput = [ pytest ];
 
   dependencies = [
+    (celery.overridePythonAttrs { doCheck = false; })
     debugpy
     docker
+    kombu
     psutil
     pytest-docker-tools
     setuptools
@@ -60,7 +61,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Pytest plugin to enable celery.contrib.pytest";
     homepage = "https://github.com/celery/pytest-celery";
-    changelog = "https://github.com/celery/pytest-celery/blob/v${version}/Changelog.rst";
+    changelog = "https://github.com/celery/pytest-celery/blob/${src.tag}/Changelog.rst";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/pytest-codspeed/default.nix b/pkgs/development/python-modules/pytest-codspeed/default.nix
index dbf611fa5b1a..0de2195da0fc 100644
--- a/pkgs/development/python-modules/pytest-codspeed/default.nix
+++ b/pkgs/development/python-modules/pytest-codspeed/default.nix
@@ -16,18 +16,34 @@
   setuptools,
 }:
 
+let
+  instrument-hooks = fetchFromGitHub {
+    owner = "CodSpeedHQ";
+    repo = "instrument-hooks";
+    rev = "b003e5024d61cfb784d6ac6f3ffd7d61bf7b9ec9";
+    hash = "sha256-JTSH4wOpOGJ97iV6sagiRUu8d3sKM2NJRXcB3NmozNQ=";
+  };
+in
+
 buildPythonPackage rec {
   pname = "pytest-codspeed";
-  version = "3.2.0";
+  version = "4.0.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "CodSpeedHQ";
     repo = "pytest-codspeed";
     tag = "v${version}";
-    hash = "sha256-SNVJtnanaSQTSeX3EFG+21GFC1WFCQTbaNyi7QjQROw=";
+    hash = "sha256-5fdG7AEiLD3ZZzU/7zBK0+LDacTZooyDUo+FefcE4uQ=";
   };
 
+  postPatch = ''
+    pushd src/pytest_codspeed/instruments/hooks
+    rmdir instrument-hooks
+    ln -nsf ${instrument-hooks} instrument-hooks
+    popd
+  '';
+
   build-system = [ hatchling ];
 
   buildInputs = [ pytest ];
diff --git a/pkgs/development/python-modules/pytest-cov/default.nix b/pkgs/development/python-modules/pytest-cov/default.nix
index a7dbf32414b1..67da986e1e91 100644
--- a/pkgs/development/python-modules/pytest-cov/default.nix
+++ b/pkgs/development/python-modules/pytest-cov/default.nix
@@ -11,13 +11,13 @@
 
 buildPythonPackage rec {
   pname = "pytest-cov";
-  version = "6.1.1";
+  version = "6.2.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "pytest_cov";
     inherit version;
-    hash = "sha256-RpNfeq77p2DnFsLr++HCFiQLlZKWbn2pnqgpLU0+Kgo=";
+    hash = "sha256-JcxswKU1ggS4EI7O3FGptXs0zGuMlnzCwBpOANimfaI=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pytest-datadir/default.nix b/pkgs/development/python-modules/pytest-datadir/default.nix
index ecd1d81e4517..0b8532f1ed49 100644
--- a/pkgs/development/python-modules/pytest-datadir/default.nix
+++ b/pkgs/development/python-modules/pytest-datadir/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-datadir";
-  version = "1.7.2";
+  version = "1.8.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "gabrielcnr";
     repo = "pytest-datadir";
     tag = "v${version}";
-    hash = "sha256-0y+1Al8nocCJXZyu8gLbYnXJzUu/oD31Zhn901XxWds=";
+    hash = "sha256-ttzYFzePPpFY6DfMGLVImZMiehuR9IhmIFxBlgrDDmk=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pytest-describe/default.nix b/pkgs/development/python-modules/pytest-describe/default.nix
index 6ce782c44200..6eb2b8390b2c 100644
--- a/pkgs/development/python-modules/pytest-describe/default.nix
+++ b/pkgs/development/python-modules/pytest-describe/default.nix
@@ -1,13 +1,16 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
 
-  # build
+  # build-system
+  setuptools,
+
+  # dependencies
   pytest,
 
   # tests
-  pytestCheckHook,
+  pytest7CheckHook,
 }:
 
 let
@@ -16,16 +19,21 @@ let
 in
 buildPythonPackage {
   inherit pname version;
-  format = "setuptools";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-ObsF65DySX2co0Lvmgt/pbraflhQWuwz9m1mHWMZVbc=";
+  src = fetchFromGitHub {
+    owner = "pytest-dev";
+    repo = "pytest-describe";
+    tag = version;
+    hash = "sha256-ih0XkYOtB+gwUsgo1oSti2460P3gq3tR+UsyRlzMjLE=";
   };
 
+  build-system = [ setuptools ];
+
   buildInputs = [ pytest ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  # test_fixture breaks with pytest 8.4
+  nativeCheckInputs = [ pytest7CheckHook ];
 
   meta = with lib; {
     description = "Describe-style plugin for the pytest framework";
diff --git a/pkgs/development/python-modules/pytest-examples/default.nix b/pkgs/development/python-modules/pytest-examples/default.nix
index ec26ae5eea97..a1d090346543 100644
--- a/pkgs/development/python-modules/pytest-examples/default.nix
+++ b/pkgs/development/python-modules/pytest-examples/default.nix
@@ -43,6 +43,11 @@ buildPythonPackage rec {
     "test_black_error_multiline"
   ];
 
+  disabledTestPaths = [
+    # assert 1 + 2 == 4
+    "tests/test_run_examples.py::test_run_example_ok_fail"
+  ];
+
   meta = {
     description = "Pytest plugin for testing examples in docstrings and markdown files";
     homepage = "https://github.com/pydantic/pytest-examples";
diff --git a/pkgs/development/python-modules/pytest-factoryboy/default.nix b/pkgs/development/python-modules/pytest-factoryboy/default.nix
index b7e394233346..5f932e44d25f 100644
--- a/pkgs/development/python-modules/pytest-factoryboy/default.nix
+++ b/pkgs/development/python-modules/pytest-factoryboy/default.nix
@@ -20,21 +20,21 @@
 
 buildPythonPackage rec {
   pname = "pytest-factoryboy";
-  version = "2.6.1";
-  format = "pyproject";
+  version = "2.8.1";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pytest-dev";
     repo = "pytest-factoryboy";
     rev = version;
-    sha256 = "sha256-GYqYwtbmMWVqImVPPBbZNRJJGcbksUPsIbi6QuPRMco=";
+    sha256 = "sha256-9dMsUujMCk89Ze4H9VJRS+ihjk0PAxKb8xqlw0+ROEI=";
   };
 
-  nativeBuildInputs = [ poetry-core ];
+  build-system = [ poetry-core ];
 
   buildInputs = [ pytest ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     factory-boy
     inflection
     typing-extensions
diff --git a/pkgs/development/python-modules/pytest-httpserver/default.nix b/pkgs/development/python-modules/pytest-httpserver/default.nix
index 6a136e9d3c05..bf2016701dde 100644
--- a/pkgs/development/python-modules/pytest-httpserver/default.nix
+++ b/pkgs/development/python-modules/pytest-httpserver/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-httpserver";
-  version = "1.1.2";
+  version = "1.1.3";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "csernazs";
     repo = "pytest-httpserver";
     tag = version;
-    hash = "sha256-41JrZ3ubaJHNzwGDWUSseJ3Z405k21SOpwW7jG5rNxg=";
+    hash = "sha256-5pyCDzt9nCwYcUdCjWlJiAkyNmf6oWBqSHQL7kJJluA=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -45,7 +45,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "HTTP server for pytest to test HTTP clients";
     homepage = "https://www.github.com/csernazs/pytest-httpserver";
-    changelog = "https://github.com/csernazs/pytest-httpserver/blob/${version}/CHANGES.rst";
+    changelog = "https://github.com/csernazs/pytest-httpserver/blob/${src.tag}/CHANGES.rst";
     license = with licenses; [ mit ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/pytest-lazy-fixtures/default.nix b/pkgs/development/python-modules/pytest-lazy-fixtures/default.nix
index 6bb33a00394f..4acc40ff1934 100644
--- a/pkgs/development/python-modules/pytest-lazy-fixtures/default.nix
+++ b/pkgs/development/python-modules/pytest-lazy-fixtures/default.nix
@@ -2,25 +2,40 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  poetry-core,
+  hatchling,
+  pytest,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "pytest-lazy-fixtures";
-  version = "1.1.2";
+  version = "1.3.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "dev-petrov";
     repo = "pytest-lazy-fixtures";
     tag = version;
-    hash = "sha256-EkvSmSTwoWmQlUZ4qBBqboOomxwn72H8taJ3CY142ms=";
+    hash = "sha256-h2Zm8Vbw3L9WeXaeFE/fJqiOgI3r+XnJUnnELDkmyaU=";
   };
 
-  build-system = [ poetry-core ];
+  postPatch = ''
+    # Prevent double registration here and in the pyproject.toml entrypoint
+    # ValueError: Plugin already registered under a different name:
+    substituteInPlace tests/conftest.py \
+      --replace-fail '"pytest_lazy_fixtures.plugin",' ""
+  '';
 
-  dependencies = [ pytestCheckHook ];
+  build-system = [ hatchling ];
+
+  dependencies = [ pytest ];
+
+  nativeCheckInputs = [ pytestCheckHook ];
+
+  disabledTestPaths = [
+    # missing pytest-deadfixtures
+    "tests/test_deadfixtures_support.py"
+  ];
 
   pythonImportsCheck = [ "pytest_lazy_fixtures" ];
 
diff --git a/pkgs/development/python-modules/pytest-mockservers/default.nix b/pkgs/development/python-modules/pytest-mockservers/default.nix
index 4f521fc236bf..6f8ad594ab5f 100644
--- a/pkgs/development/python-modules/pytest-mockservers/default.nix
+++ b/pkgs/development/python-modules/pytest-mockservers/default.nix
@@ -46,6 +46,9 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
+  # relies on the removed event_loop fixture
+  disabledTests = [ "test_udp_server_factory" ];
+
   pythonImportsCheck = [ "pytest_mockservers" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pytest-qt/default.nix b/pkgs/development/python-modules/pytest-qt/default.nix
index eac27debb474..36758f51da08 100644
--- a/pkgs/development/python-modules/pytest-qt/default.nix
+++ b/pkgs/development/python-modules/pytest-qt/default.nix
@@ -1,29 +1,35 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   setuptools-scm,
   pytest,
+  pluggy,
+  typing-extensions,
   pyqt5,
-  pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "pytest-qt";
-  version = "4.4.0";
-  format = "setuptools";
+  version = "4.5.0";
+  pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-dolhQqlApChTOQCNaSijbUvnSv7H5jRXfoQsnMXFaEQ=";
+  src = fetchFromGitHub {
+    owner = "pytest-dev";
+    repo = "pytest-qt";
+    tag = version;
+    hash = "sha256-ZCWWhd1/7qdSgGLNbsjPlxg24IFdqbNtLRktgMFVCJY=";
   };
 
-  nativeBuildInputs = [ setuptools-scm ];
+  build-system = [ setuptools-scm ];
 
   buildInputs = [ pytest ];
 
+  dependencies = [
+    pluggy
+    typing-extensions
+  ];
+
   nativeCheckInputs = [ pyqt5 ];
 
   pythonImportsCheck = [ "pytestqt" ];
diff --git a/pkgs/development/python-modules/pytest-random-order/default.nix b/pkgs/development/python-modules/pytest-random-order/default.nix
index 9886bcf7f869..1c900d4b6e84 100644
--- a/pkgs/development/python-modules/pytest-random-order/default.nix
+++ b/pkgs/development/python-modules/pytest-random-order/default.nix
@@ -1,28 +1,31 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   py,
   pytest,
   pytest-xdist,
   pytestCheckHook,
-  pythonOlder,
   setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "pytest-random-order";
-  version = "1.1.1";
+  version = "1.2.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.5";
-
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-RHLX008fHF86NZxP/FwT7QZSMvMeyhnIhEwatAbnkIA=";
+  src = fetchFromGitHub {
+    owner = "jbasko";
+    repo = "pytest-random-order";
+    tag = "v${version}";
+    hash = "sha256-c282PrdXxG7WChnkpLWe059OmtTOl1Mn6yWgMRfCjBA=";
   };
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   buildInputs = [ pytest ];
 
diff --git a/pkgs/development/python-modules/pytest-regressions/default.nix b/pkgs/development/python-modules/pytest-regressions/default.nix
index 337c5f048a17..18286d14fcd9 100644
--- a/pkgs/development/python-modules/pytest-regressions/default.nix
+++ b/pkgs/development/python-modules/pytest-regressions/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-regressions";
-  version = "2.7.0";
+  version = "2.8.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "ESSS";
     repo = "pytest-regressions";
     tag = "v${version}";
-    hash = "sha256-w9uwJJtikbjUtjpJJ3dEZ1zU0KbdyLaDuJWJr45WpCg=";
+    hash = "sha256-8FbPWKYHy/0ITrCx9044iYOR7B9g8tgEdV+QfUg4esk=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/pytest-relaxed/default.nix b/pkgs/development/python-modules/pytest-relaxed/default.nix
index a706d0fc87dc..7f317759960b 100644
--- a/pkgs/development/python-modules/pytest-relaxed/default.nix
+++ b/pkgs/development/python-modules/pytest-relaxed/default.nix
@@ -21,6 +21,12 @@ buildPythonPackage rec {
     hash = "sha256-lW6gKOww27+2gN2Oe0p/uPgKI5WV6Ius4Bi/LA1xgkg=";
   };
 
+  patches = [
+    # https://github.com/bitprophet/pytest-relaxed/issues/28
+    # https://github.com/bitprophet/pytest-relaxed/pull/29
+    ./fix-oldstyle-hookimpl-setup.patch
+  ];
+
   buildInputs = [ pytest ];
 
   propagatedBuildInputs = [ decorator ];
@@ -32,6 +38,10 @@ buildPythonPackage rec {
 
   enabledTestPaths = [ "tests" ];
 
+  disabledTests = [
+    "test_skips_pytest_fixtures"
+  ];
+
   pythonImportsCheck = [ "pytest_relaxed" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/pytest-relaxed/fix-oldstyle-hookimpl-setup.patch b/pkgs/development/python-modules/pytest-relaxed/fix-oldstyle-hookimpl-setup.patch
new file mode 100644
index 000000000000..ef44c262ca51
--- /dev/null
+++ b/pkgs/development/python-modules/pytest-relaxed/fix-oldstyle-hookimpl-setup.patch
@@ -0,0 +1,22 @@
+From ec22fc4da8cc081c53da7b3aaaa2d5095b7abdec Mon Sep 17 00:00:00 2001
+From: Marcel Telka <marcel@telka.sk>
+Date: Mon, 13 Nov 2023 16:18:28 +0100
+Subject: [PATCH] Fix deprecation warning
+
+---
+ pytest_relaxed/plugin.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/pytest_relaxed/plugin.py b/pytest_relaxed/plugin.py
+index 562a597..28798d3 100644
+--- a/pytest_relaxed/plugin.py
++++ b/pytest_relaxed/plugin.py
+@@ -37,7 +37,7 @@ def pytest_collect_file(file_path, parent):
+     return SpecModule.from_parent(parent=parent, path=file_path)
+ 
+ 
+-@pytest.mark.trylast  # So we can be sure builtin terminalreporter exists
++@pytest.hookimpl(trylast=True)  # Be sure builtin terminalreporter exists
+ def pytest_configure(config):
+     # TODO: we _may_ sometime want to do the isatty/slaveinput/etc checks that
+     # pytest-sugar does?
diff --git a/pkgs/development/python-modules/pytest-run-parallel/default.nix b/pkgs/development/python-modules/pytest-run-parallel/default.nix
index cad82d8f2244..4a061f97c686 100644
--- a/pkgs/development/python-modules/pytest-run-parallel/default.nix
+++ b/pkgs/development/python-modules/pytest-run-parallel/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "pytest-run-parallel";
-  version = "0.3.1";
+  version = "0.6.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Quansight-Labs";
     repo = "pytest-run-parallel";
     tag = "v${version}";
-    hash = "sha256-YBky+aoMO3dclod6RTQZF0X8fE8CAgHHY4es8vWHb3U=";
+    hash = "sha256-6cfpPJItOmb79KERqpKz/nQlyTrAj4yv+bGM8SXrsXg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pytest-services/default.nix b/pkgs/development/python-modules/pytest-services/default.nix
index 537e06b5e04b..c45a7649629f 100644
--- a/pkgs/development/python-modules/pytest-services/default.nix
+++ b/pkgs/development/python-modules/pytest-services/default.nix
@@ -2,7 +2,6 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch,
   psutil,
   pylibmc,
   pytest,
@@ -17,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-services";
-  version = "2.2.1";
+  version = "2.2.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -25,19 +24,10 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "pytest-dev";
     repo = "pytest-services";
-    tag = version;
-    hash = "sha256-E/VcKcAb1ekypm5jP4lsSz1LYJTcTSed6i5OY5ihP30=";
+    tag = "v${version}";
+    hash = "sha256-kWgqb7+3/hZKUz7B3PnfxHZq6yU3JUeJ+mruqrMD/NE=";
   };
 
-  patches = [
-    # Replace distutils.spawn.find_executable with shutil.which, https://github.com/pytest-dev/pytest-services/pull/46
-    (fetchpatch {
-      name = "replace-distutils.patch";
-      url = "https://github.com/pytest-dev/pytest-services/commit/e0e2a85434a2dcbcc0584299c5b2b751efe0b6db.patch";
-      hash = "sha256-hvr7EedfjfonHDn6v2slwUBqz1xQoF7Ez/kqAhZRXEc=";
-    })
-  ];
-
   nativeBuildInputs = [
     setuptools-scm
     toml
@@ -72,7 +62,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Services plugin for pytest testing framework";
     homepage = "https://github.com/pytest-dev/pytest-services";
-    changelog = "https://github.com/pytest-dev/pytest-services/blob/${version}/CHANGES.rst";
+    changelog = "https://github.com/pytest-dev/pytest-services/blob/${src.tag}/CHANGES.rst";
     license = licenses.mit;
     maintainers = with maintainers; [ dotlambda ];
   };
diff --git a/pkgs/development/python-modules/pytest-subtests/default.nix b/pkgs/development/python-modules/pytest-subtests/default.nix
index 0b4f03e7942b..2826f917cee1 100644
--- a/pkgs/development/python-modules/pytest-subtests/default.nix
+++ b/pkgs/development/python-modules/pytest-subtests/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-subtests";
-  version = "0.14.1";
+  version = "0.14.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "pytest_subtests";
     inherit version;
-    hash = "sha256-NQwArcNsOv9namYTXIGu2eIYLhX2w+yHITZpGLu/dYA=";
+    hash = "sha256-cVSoZl/VKO5wp20AIWpE0TncPJyDUhoPd597CtT4AN4=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pytest-xdist/default.nix b/pkgs/development/python-modules/pytest-xdist/default.nix
index 5660820d969c..3fd5f57fc93c 100644
--- a/pkgs/development/python-modules/pytest-xdist/default.nix
+++ b/pkgs/development/python-modules/pytest-xdist/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "pytest-xdist";
-  version = "3.6.1";
+  version = "3.8.0";
   disabled = pythonOlder "3.7";
 
   pyproject = true;
@@ -23,7 +23,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "pytest_xdist";
     inherit version;
-    hash = "sha256-6tFWpNsjHux2lzf1dmjvWKIISjSy5VxKj6INhhEHMA0=";
+    hash = "sha256-fleBJeybxgUIYaqT8tWfHY0IVZXWVRwskLb0+tjTqfE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pytest/8_3.nix b/pkgs/development/python-modules/pytest/8_3.nix
new file mode 100644
index 000000000000..2b7cc734324f
--- /dev/null
+++ b/pkgs/development/python-modules/pytest/8_3.nix
@@ -0,0 +1,111 @@
+{
+  lib,
+  buildPythonPackage,
+  callPackage,
+  pythonOlder,
+  fetchPypi,
+  writeText,
+
+  # build-system
+  setuptools,
+  setuptools-scm,
+
+  # dependencies
+  attrs,
+  exceptiongroup,
+  iniconfig,
+  packaging,
+  pluggy,
+  tomli,
+
+  # optional-dependencies
+  argcomplete,
+  hypothesis,
+  mock,
+  pygments,
+  requests,
+  xmlschema,
+}:
+
+buildPythonPackage rec {
+  pname = "pytest";
+  version = "8.3.5";
+  pyproject = true;
+
+  src = fetchPypi {
+    inherit pname version;
+    hash = "sha256-9O/nDMFOURVlrEdrV8J54SqFWxH0jyEq8QgO8iY9OEU=";
+  };
+
+  outputs = [
+    "out"
+    "testout"
+  ];
+
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
+  dependencies = [
+    iniconfig
+    packaging
+    pluggy
+    pygments
+  ]
+  ++ lib.optionals (pythonOlder "3.11") [
+    exceptiongroup
+    tomli
+  ];
+
+  optional-dependencies = {
+    testing = [
+      argcomplete
+      attrs
+      hypothesis
+      mock
+      requests
+      setuptools
+      xmlschema
+    ];
+  };
+
+  postInstall = ''
+    mkdir $testout
+    cp -R testing $testout/testing
+  '';
+
+  doCheck = false;
+  passthru.tests.pytest = callPackage ./tests.nix { };
+
+  # Remove .pytest_cache when using py.test in a Nix build
+  setupHook = writeText "pytest-hook" ''
+    pytestcachePhase() {
+        find $out -name .pytest_cache -type d -exec rm -rf {} +
+    }
+    appendToVar preDistPhases pytestcachePhase
+
+    # pytest generates it's own bytecode files to improve assertion messages.
+    # These files similar to cpython's bytecode files but are never laoded
+    # by python interpreter directly. We remove them for a few reasons:
+    # - files are non-deterministic: https://github.com/NixOS/nixpkgs/issues/139292
+    #   (file headers are generatedt by pytest directly and contain timestamps)
+    # - files are not needed after tests are finished
+    pytestRemoveBytecodePhase () {
+        # suffix is defined at:
+        #    https://github.com/pytest-dev/pytest/blob/7.2.1/src/_pytest/assertion/rewrite.py#L51-L53
+        find $out -name "*-pytest-*.py[co]" -delete
+    }
+    appendToVar preDistPhases pytestRemoveBytecodePhase
+  '';
+
+  pythonImportsCheck = [ "pytest" ];
+
+  meta = with lib; {
+    description = "Framework for writing tests";
+    homepage = "https://docs.pytest.org";
+    changelog = "https://github.com/pytest-dev/pytest/releases/tag/${version}";
+    teams = [ teams.python ];
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/development/python-modules/pytest/default.nix b/pkgs/development/python-modules/pytest/default.nix
index 6eb3a02661cb..17d42090876c 100644
--- a/pkgs/development/python-modules/pytest/default.nix
+++ b/pkgs/development/python-modules/pytest/default.nix
@@ -29,12 +29,12 @@
 
 buildPythonPackage rec {
   pname = "pytest";
-  version = "8.3.5";
+  version = "8.4.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-9O/nDMFOURVlrEdrV8J54SqFWxH0jyEq8QgO8iY9OEU=";
+    hash = "sha256-fGf9aRdIdzWe2Tcew6+KPSsEdBgYxR5emcwXQiUfqTw=";
   };
 
   outputs = [
@@ -42,15 +42,16 @@ buildPythonPackage rec {
     "testout"
   ];
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools
     setuptools-scm
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     iniconfig
     packaging
     pluggy
+    pygments
   ]
   ++ lib.optionals (pythonOlder "3.11") [
     exceptiongroup
@@ -63,7 +64,6 @@ buildPythonPackage rec {
       attrs
       hypothesis
       mock
-      pygments
       requests
       setuptools
       xmlschema
diff --git a/pkgs/development/python-modules/python-awair/default.nix b/pkgs/development/python-modules/python-awair/default.nix
index c814188477fa..21d946e89d62 100644
--- a/pkgs/development/python-modules/python-awair/default.nix
+++ b/pkgs/development/python-modules/python-awair/default.nix
@@ -31,6 +31,9 @@ buildPythonPackage rec {
     voluptuous
   ];
 
+  # Failed: async def functions are not natively supported.
+  doCheck = false;
+
   nativeCheckInputs = [
     pytest-aiohttp
     pytestCheckHook
diff --git a/pkgs/development/python-modules/python-binance/default.nix b/pkgs/development/python-modules/python-binance/default.nix
index 77db7394f7e1..5f7c7d37e4c0 100644
--- a/pkgs/development/python-modules/python-binance/default.nix
+++ b/pkgs/development/python-modules/python-binance/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "python-binance";
-  version = "1.0.27";
+  version = "1.0.29";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "sammchardy";
     repo = "python-binance";
     tag = "v${version}";
-    hash = "sha256-nsJuHxPXhMBRY4BUDDLj5sHK/GuJA0pBU3RGUDxVm50=";
+    hash = "sha256-Hqd6228k2j1BPzBBCRpdEp0rAGxZt00XPnzpCPlwIfg=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-box/default.nix b/pkgs/development/python-modules/python-box/default.nix
index 80bfb3ef7e05..701c93f8f0c9 100644
--- a/pkgs/development/python-modules/python-box/default.nix
+++ b/pkgs/development/python-modules/python-box/default.nix
@@ -49,6 +49,11 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ pytestCheckHook ] ++ optional-dependencies.all;
 
+  disabledTests = [
+    # ruamel 8.18.13 update changed white space rules
+    "test_to_yaml_ruamel"
+  ];
+
   pythonImportsCheck = [ "box" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/python-codon-tables/default.nix b/pkgs/development/python-modules/python-codon-tables/default.nix
index af0e275321d1..af72906af4eb 100644
--- a/pkgs/development/python-modules/python-codon-tables/default.nix
+++ b/pkgs/development/python-modules/python-codon-tables/default.nix
@@ -6,13 +6,13 @@
 
 buildPythonPackage rec {
   pname = "python-codon-tables";
-  version = "0.1.15";
+  version = "0.1.18";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "python_codon_tables";
     inherit version;
-    hash = "sha256-bK0Y8y5W6xmtGeRUtLDGsg1voVKp1uU37tBqi0/raLY=";
+    hash = "sha256-c/VSmArSkq+46LzW3r+CQEG1mwp87ACbZ7EWkMOGOQc=";
   };
 
   # no tests in tarball
diff --git a/pkgs/development/python-modules/python-constraint/default.nix b/pkgs/development/python-modules/python-constraint/default.nix
index ae00c34c3354..2ac55f35c9f1 100644
--- a/pkgs/development/python-modules/python-constraint/default.nix
+++ b/pkgs/development/python-modules/python-constraint/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "python-constraint";
-  version = "1.4.0";
+  version = "2.4.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "python-constraint";
     repo = "python-constraint";
-    rev = version;
-    sha256 = "1dv11406yxmmgkkhwzqicajbg2bmla5xfad7lv57zyahxz8jzz94";
+    tag = version;
+    sha256 = "sha256-Vi+dD/QmHfUrL0l5yTb7B1ILuXj3HYfT0QINdyfoqFo=";
   };
 
   nativeCheckInputs = [ pytestCheckHook ];
diff --git a/pkgs/development/python-modules/python-crontab/default.nix b/pkgs/development/python-modules/python-crontab/default.nix
index c89cd3d07bda..9fd4c03572ed 100644
--- a/pkgs/development/python-modules/python-crontab/default.nix
+++ b/pkgs/development/python-modules/python-crontab/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "python-crontab";
-  version = "3.2.0";
+  version = "3.3.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "python_crontab";
     inherit version;
-    hash = "sha256-QAZ9HdOa3jRgsq2FV8dlFRTNOFHe//9hxcYOEifFw2s=";
+    hash = "sha256-AHyK7mjd3z4E7E3OD6wSS5O9aL50cPyV0qlhehXeKRs=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-dbusmock/default.nix b/pkgs/development/python-modules/python-dbusmock/default.nix
index 18cd8884ee1f..48dc270bac44 100644
--- a/pkgs/development/python-modules/python-dbusmock/default.nix
+++ b/pkgs/development/python-modules/python-dbusmock/default.nix
@@ -30,14 +30,14 @@ let
 in
 buildPythonPackage rec {
   pname = "python-dbusmock";
-  version = "0.34.2";
+  version = "0.36.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "martinpitt";
     repo = "python-dbusmock";
     tag = version;
-    hash = "sha256-7h5SIcgWcbzInmCkbGz/ulfPJvqPPguWLJY+AXJuo0c=";
+    hash = "sha256-9YnMOQUuwAcrL0ZaQr7iGly9esZaSRIFThQRNUtSndo=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/python-dotenv/default.nix b/pkgs/development/python-modules/python-dotenv/default.nix
index 2d46ddd688d3..44e978008bdf 100644
--- a/pkgs/development/python-modules/python-dotenv/default.nix
+++ b/pkgs/development/python-modules/python-dotenv/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "python-dotenv";
-  version = "1.1.0";
+  version = "1.1.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "theskumar";
     repo = "python-dotenv";
     tag = "v${version}";
-    hash = "sha256-jpSOChCUgJxrA5n+DNQX3dtFQ5Q6VG4g4pdWRIh+dOo=";
+    hash = "sha256-GeN6/pnqhm7TTP+H9bKhJat6EwEl2EPl46mNSJWwFKk=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-fontconfig/default.nix b/pkgs/development/python-modules/python-fontconfig/default.nix
index f249489e4bac..18f40cbb647c 100644
--- a/pkgs/development/python-modules/python-fontconfig/default.nix
+++ b/pkgs/development/python-modules/python-fontconfig/default.nix
@@ -22,13 +22,13 @@ let
 in
 buildPythonPackage rec {
   pname = "python-fontconfig";
-  version = "0.6.0";
+  version = "0.6.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "python_fontconfig";
     inherit version;
-    sha256 = "sha256-1esVZVMvkcAKWchaOrIki2CYoJDffN1PW+A9nXWjCeU=";
+    sha256 = "sha256-qka4KksXW9LPn+Grmyng3kyrhwIEG7UEpVDeKfX89zM=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/python-gitlab/default.nix b/pkgs/development/python-modules/python-gitlab/default.nix
index fb351f79bb97..d55bd12447c4 100644
--- a/pkgs/development/python-modules/python-gitlab/default.nix
+++ b/pkgs/development/python-modules/python-gitlab/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "python-gitlab";
-  version = "6.1.0";
+  version = "6.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "python_gitlab";
     inherit version;
-    hash = "sha256-Bi1pQ2mbCbzkD3J/DQkGoLJUykVVk/gXRbsaNSU17nc=";
+    hash = "sha256-uIx5zqZd0kJZIsgpcw6pWCftcTLYabhTK5CoxxmcwaY=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-gnupg/default.nix b/pkgs/development/python-modules/python-gnupg/default.nix
index 8fb7866efbd0..0ba82fdcccb8 100644
--- a/pkgs/development/python-modules/python-gnupg/default.nix
+++ b/pkgs/development/python-modules/python-gnupg/default.nix
@@ -9,13 +9,13 @@
 
 buildPythonPackage rec {
   pname = "python-gnupg";
-  version = "0.5.4";
+  version = "0.5.5";
 
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-8v21+ylhXHfCdD4cs9kxQ1Om6HsQw30jjZGuHG/q4IY=";
+    hash = "sha256-P9yvdvYKG5SP+ON9w5jQPPnOdCcGXVgwgrktp6T/WmM=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/python-hosts/default.nix b/pkgs/development/python-modules/python-hosts/default.nix
index 0f582e760250..7eb9ce7dbad7 100644
--- a/pkgs/development/python-modules/python-hosts/default.nix
+++ b/pkgs/development/python-modules/python-hosts/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "python-hosts";
-  version = "1.0.7";
+  version = "1.1.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "python_hosts";
     inherit version;
-    hash = "sha256-TFaZHiL2v/woCWgz3nh/kjUOhbfN1ghnBnJcVcTwSrk=";
+    hash = "sha256-XiU6aO6EhFVgj1g7TYMdbgg7IvjkU2DFoiwYikrB13A=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-jenkins/default.nix b/pkgs/development/python-modules/python-jenkins/default.nix
index e06a0760fbdd..6e2eb9c169ba 100644
--- a/pkgs/development/python-modules/python-jenkins/default.nix
+++ b/pkgs/development/python-modules/python-jenkins/default.nix
@@ -18,12 +18,13 @@
 
 buildPythonPackage rec {
   pname = "python-jenkins";
-  version = "1.8.2";
+  version = "1.8.3";
   format = "setuptools";
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-VufauwYHvbjh1vxtLUMBq+2+2RZdorIG+svTBxy27ss=";
+    pname = "python_jenkins";
+    inherit version;
+    hash = "sha256-j0dhw5GsEejB8j93EBCSDBBEBJdwWrcXXVI1j1oS3Jg=";
   };
 
   # test uses timeout mechanism unsafe for use with the "spawn"
diff --git a/pkgs/development/python-modules/python-json-logger/default.nix b/pkgs/development/python-modules/python-json-logger/default.nix
index 9e7a8198ecb4..acae4e2689da 100644
--- a/pkgs/development/python-modules/python-json-logger/default.nix
+++ b/pkgs/development/python-modules/python-json-logger/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "python-json-logger";
-  version = "3.2.1";
+  version = "3.3.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nhairs";
     repo = "python-json-logger";
     tag = "v${version}";
-    hash = "sha256-dM9/ehPY/BnJSNBq1BiTUpJRigdzbGb3jD8Uhx+hmKc=";
+    hash = "sha256-q1s+WRU5xTmF4YW20DrDnXbMeW6vGYzVekxxIDVt8gw=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-markdown-math/default.nix b/pkgs/development/python-modules/python-markdown-math/default.nix
index 3bf104029b40..508229050afe 100644
--- a/pkgs/development/python-modules/python-markdown-math/default.nix
+++ b/pkgs/development/python-modules/python-markdown-math/default.nix
@@ -1,22 +1,25 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
+  setuptools,
   markdown,
-  isPy27,
 }:
 
 buildPythonPackage rec {
   pname = "python-markdown-math";
-  version = "0.8";
-  format = "setuptools";
-  disabled = isPy27;
+  version = "0.9";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    sha256 = "8564212af679fc18d53f38681f16080fcd3d186073f23825c7ce86fadd3e3635";
+  src = fetchFromGitHub {
+    owner = "mitya57";
+    repo = "python-markdown-math";
+    tag = version;
+    hash = "sha256-m/i43lvOehZSazHXhoAZTRSB5BQgn2VFjXADxSKeXfs=";
   };
 
+  build-system = [ setuptools ];
+
   nativeCheckInputs = [ markdown ];
 
   meta = {
diff --git a/pkgs/development/python-modules/python-on-whales/default.nix b/pkgs/development/python-modules/python-on-whales/default.nix
index bbe238cde817..9b917d59b2ba 100644
--- a/pkgs/development/python-modules/python-on-whales/default.nix
+++ b/pkgs/development/python-modules/python-on-whales/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "python-on-whales";
-  version = "0.75.1";
+  version = "0.78.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "gabrieldemarmiesse";
     repo = "python-on-whales";
     tag = "v${version}";
-    hash = "sha256-JjzBFVgPNnU0q5hL+RZJMs3WxbeZbBKyvsV6clUFjpE=";
+    hash = "sha256-mpCBqFxxFxljhoTveLmk4XfqngiQPsufqr927hSwNfA=";
   };
 
   build-system = [ setuptools ];
@@ -41,7 +41,7 @@ buildPythonPackage rec {
   meta = {
     description = "Docker client for Python, designed to be fun and intuitive";
     homepage = "https://github.com/gabrieldemarmiesse/python-on-whales";
-    changelog = "https://github.com/gabrieldemarmiesse/python-on-whales/releases/tag/v${version}";
+    changelog = "https://github.com/gabrieldemarmiesse/python-on-whales/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix b/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix
index 5aaca9b14f11..6c11fb6da120 100644
--- a/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix
+++ b/pkgs/development/python-modules/python-owasp-zap-v2-4/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "python-owasp-zap-v2-4";
-  version = "0.0.18";
+  version = "0.4.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "zaproxy";
     repo = "zap-api-python";
-    rev = version;
-    sha256 = "0b46m9s0vwaaq8vhiqspdr2ns9qdw65fnjh8mf58gjinlsd27ygk";
+    tag = version;
+    sha256 = "sha256-UG8+0jJwnywvuc68/9r10kKMqxNIOg5mIdPt2Fx2BZA=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/python-pkcs11/default.nix b/pkgs/development/python-modules/python-pkcs11/default.nix
index 10e37e558501..baa6e6b45e63 100644
--- a/pkgs/development/python-modules/python-pkcs11/default.nix
+++ b/pkgs/development/python-modules/python-pkcs11/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "python-pkcs11";
-  version = "0.7.0";
-  format = "setuptools";
+  version = "0.8.1";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "danni";
     repo = "python-pkcs11";
-    rev = "v${version}";
-    sha256 = "0kncbipfpsb7m7mhv5s5b9wk604h1j08i2j26fn90pklgqll0xhv";
+    tag = "v${version}";
+    sha256 = "sha256-iCfcVVzAwwg69Ym1uVimSzYZBQmC+Yppl5YXDaLIcqc=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/python-roborock/default.nix b/pkgs/development/python-modules/python-roborock/default.nix
index d6fb0b903251..faa5d84101c1 100644
--- a/pkgs/development/python-modules/python-roborock/default.nix
+++ b/pkgs/development/python-modules/python-roborock/default.nix
@@ -25,7 +25,7 @@
 
 buildPythonPackage rec {
   pname = "python-roborock";
-  version = "2.25.0";
+  version = "2.27.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -34,7 +34,7 @@ buildPythonPackage rec {
     owner = "humbertogontijo";
     repo = "python-roborock";
     tag = "v${version}";
-    hash = "sha256-RsNWhcScp81plqXg9NmRFJhF+aLA0ld0A5H6mHo60uE=";
+    hash = "sha256-3iNqeRCdkkL77hYlh+LRo8ZKExcpk075eBbnp8oJQ8w=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/python-socketio/default.nix b/pkgs/development/python-modules/python-socketio/default.nix
index bd85309718d6..cd621b30166d 100644
--- a/pkgs/development/python-modules/python-socketio/default.nix
+++ b/pkgs/development/python-modules/python-socketio/default.nix
@@ -18,7 +18,7 @@
 
   # tests
   msgpack,
-  pytestCheckHook,
+  pytest7CheckHook,
   simple-websocket,
   uvicorn,
 
@@ -53,7 +53,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     msgpack
-    pytestCheckHook
+    pytest7CheckHook
     uvicorn
     simple-websocket
   ]
diff --git a/pkgs/development/python-modules/python-socks/default.nix b/pkgs/development/python-modules/python-socks/default.nix
index 8d0c255cbbc2..183fdd950cb5 100644
--- a/pkgs/development/python-modules/python-socks/default.nix
+++ b/pkgs/development/python-modules/python-socks/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "python-socks";
-  version = "2.7.1";
+  version = "2.7.2";
   pyproject = true;
 
   disabled = pythonOlder "3.6.2";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "romis2012";
     repo = "python-socks";
     tag = "v${version}";
-    hash = "sha256-7BfdyQDfRIPSC3Iv+cDcR0VFHX+l1OPRMElzHGL2x3M=";
+    hash = "sha256-9RzlK8iErM94vpVLeildYjqXbRxdiVyxASCZHKd0mao=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/python-stdnum/default.nix b/pkgs/development/python-modules/python-stdnum/default.nix
index cf0c31466010..15722e6b4496 100644
--- a/pkgs/development/python-modules/python-stdnum/default.nix
+++ b/pkgs/development/python-modules/python-stdnum/default.nix
@@ -1,7 +1,7 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   pytestCheckHook,
   pytest-cov-stub,
   setuptools,
@@ -13,23 +13,24 @@ buildPythonPackage rec {
   version = "2.1";
   pyproject = true;
 
-  src = fetchPypi {
-    pname = "python_stdnum";
-    inherit version;
-    hash = "sha256-awFkWWnrPf1VBhoBFNWTdTzZ5lPOqQgxmLfuoSZEOXo=";
+  src = fetchFromGitHub {
+    owner = "arthurdejong";
+    repo = "python-stdnum";
+    tag = version;
+    hash = "sha256-9m4tO9TX9lV4V3wTkMFDj0Mc+jl4bKsHM/adeF3cBTE=";
   };
 
   build-system = [ setuptools ];
 
+  optional-dependencies = {
+    SOAP = [ zeep ];
+  };
+
   nativeCheckInputs = [
     pytestCheckHook
     pytest-cov-stub
   ];
 
-  optional-dependencies = {
-    SOAP = [ zeep ];
-  };
-
   pythonImportsCheck = [ "stdnum" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/python-tado/default.nix b/pkgs/development/python-modules/python-tado/default.nix
index 7cde7aa3d8e6..7ef8016aad0f 100644
--- a/pkgs/development/python-modules/python-tado/default.nix
+++ b/pkgs/development/python-modules/python-tado/default.nix
@@ -2,33 +2,35 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
+  poetry-core,
   pytest-cov-stub,
   pytest-mock,
+  pytest-socket,
   pytestCheckHook,
   requests,
   responses,
-  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "python-tado";
-  version = "0.18.15";
+  version = "0.19.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "wmalgadey";
     repo = "PyTado";
     tag = version;
-    hash = "sha256-FUnD5JVS816XQYqXGSDnypqcYuKVhEeFIFcENf8BkcU=";
+    hash = "sha256-me62VPjKU+vh0vo4Fl86sEse1QZYD2zDpxchSiUcxTY=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [ poetry-core ];
 
   dependencies = [ requests ];
 
   nativeCheckInputs = [
     pytest-cov-stub
     pytest-mock
+    pytest-socket
     pytestCheckHook
     responses
   ];
diff --git a/pkgs/development/python-modules/python-telegram-bot/default.nix b/pkgs/development/python-modules/python-telegram-bot/default.nix
index c815561a0b03..8340153612d8 100644
--- a/pkgs/development/python-modules/python-telegram-bot/default.nix
+++ b/pkgs/development/python-modules/python-telegram-bot/default.nix
@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "python-telegram-bot";
-  version = "22.1";
+  version = "22.3";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     owner = "python-telegram-bot";
     repo = "python-telegram-bot";
     tag = "v${version}";
-    hash = "sha256-zysqE1WZCHdoJUr9+yE7L5xY5pInNUKC4qw4v3zPSRg=";
+    hash = "sha256-mckCkz5DBRjO4iFvRpkqLa7H8GBE/Lwi9CQ902pQ1nQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pytraccar/default.nix b/pkgs/development/python-modules/pytraccar/default.nix
index 6344f1e6d9bd..47c3a7233882 100644
--- a/pkgs/development/python-modules/pytraccar/default.nix
+++ b/pkgs/development/python-modules/pytraccar/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pytraccar";
-  version = "2.1.1";
+  version = "3.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "ludeeus";
     repo = "pytraccar";
     tag = version;
-    hash = "sha256-WTRqYw66iD4bbb1aWJfBI67+DtE1FE4oiuUKpfVqypE=";
+    hash = "sha256-DtxZCvLuvQpbu/1lIXz2BVbACt5Q1N2txVMyqwd4d9A=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -48,7 +48,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python library to handle device information from Traccar";
     homepage = "https://github.com/ludeeus/pytraccar";
-    changelog = "https://github.com/ludeeus/pytraccar/releases/tag/${version}";
+    changelog = "https://github.com/ludeeus/pytraccar/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/pytransportnswv2/default.nix b/pkgs/development/python-modules/pytransportnswv2/default.nix
index f512ae5cb7ab..83e7b8452d2a 100644
--- a/pkgs/development/python-modules/pytransportnswv2/default.nix
+++ b/pkgs/development/python-modules/pytransportnswv2/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "pytransportnswv2";
-  version = "0.8.7";
+  version = "0.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "PyTransportNSWv2";
     inherit version;
-    hash = "sha256-Jg/oEgbxn0eGf9Bn9wte6Wqc1TYVb8GjzU1mLWk1qtE=";
+    hash = "sha256-J3OW8fWldbkKzCDlXSv7nucVdyEnDFx8uCicF+ELQkQ=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyttsx3/default.nix b/pkgs/development/python-modules/pyttsx3/default.nix
index ba9afeb6be85..a66e1ca4489a 100644
--- a/pkgs/development/python-modules/pyttsx3/default.nix
+++ b/pkgs/development/python-modules/pyttsx3/default.nix
@@ -6,12 +6,12 @@
 
 buildPythonPackage rec {
   pname = "pyttsx3";
-  version = "2.98";
+  version = "2.99";
   format = "wheel";
 
   src = fetchPypi {
     inherit pname version format;
-    sha256 = "sha256-s/tMpNWuT45oNtaze/X+4P1R0Vf/on+5Bkvm5749o3o=";
+    sha256 = "sha256-/z5P91bCTXK58/LzBODtqv0PWK2w5vS5DZMEQM2osgc=";
     dist = "py3";
     python = "py3";
   };
diff --git a/pkgs/development/python-modules/pytubefix/default.nix b/pkgs/development/python-modules/pytubefix/default.nix
index 77d81e25bd5b..45a8742b4e0b 100644
--- a/pkgs/development/python-modules/pytubefix/default.nix
+++ b/pkgs/development/python-modules/pytubefix/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "pytubefix";
-  version = "9.2.2";
+  version = "9.4.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "JuanBindez";
     repo = "pytubefix";
     tag = "v${version}";
-    hash = "sha256-Abx4VIA8dnEZpl86IyGJYSR8n6sPmtCTq5eJbqKyNRM=";
+    hash = "sha256-aw17XiWdr8cDIL8o4Dc91YLi3t4B8r5VAhBgZtCm3x8=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyturbojpeg/default.nix b/pkgs/development/python-modules/pyturbojpeg/default.nix
index 8cfb975b808c..881ff4ec7182 100644
--- a/pkgs/development/python-modules/pyturbojpeg/default.nix
+++ b/pkgs/development/python-modules/pyturbojpeg/default.nix
@@ -12,14 +12,14 @@
 
 buildPythonPackage rec {
   pname = "pyturbojpeg";
-  version = "1.8.0";
+  version = "1.8.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lilohuang";
     repo = "PyTurboJPEG";
     tag = "v${version}";
-    hash = "sha256-4DPkzHjEsVjioRNLZii/5gZIEbj8A8rNkL8UXUQsgdY=";
+    hash = "sha256-zyLNIo7hQuzTlEgdvri3bSnAiRRKKup57tfCIxiBq24=";
   };
 
   patches = [
@@ -44,7 +44,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "turbojpeg" ];
 
   meta = with lib; {
-    changelog = "https://github.com/lilohuang/PyTurboJPEG/releases/tag/v${version}";
+    changelog = "https://github.com/lilohuang/PyTurboJPEG/releases/tag/${src.tag}";
     description = "Python wrapper of libjpeg-turbo for decoding and encoding JPEG image";
     homepage = "https://github.com/lilohuang/PyTurboJPEG";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/pytz/default.nix b/pkgs/development/python-modules/pytz/default.nix
index d258ad926ec2..5049c209f088 100644
--- a/pkgs/development/python-modules/pytz/default.nix
+++ b/pkgs/development/python-modules/pytz/default.nix
@@ -3,6 +3,7 @@
   buildPythonPackage,
   fetchPypi,
   setuptools,
+  tzdata,
   unittestCheckHook,
 }:
 
@@ -16,6 +17,12 @@ buildPythonPackage rec {
     hash = "sha256-NguePbtJognCGtYYCcf7RTZD4EiziSTHZYE1RnRugcM=";
   };
 
+  postPatch = ''
+    # Use our system-wide zoneinfo dir instead of the bundled one
+    rm -rf pytz/zoneinfo
+    ln -snvf ${tzdata}/share/zoneinfo pytz/zoneinfo
+  '';
+
   build-system = [ setuptools ];
 
   nativeCheckInputs = [ unittestCheckHook ];
@@ -32,6 +39,9 @@ buildPythonPackage rec {
     description = "World timezone definitions, modern and historical";
     homepage = "https://pythonhosted.org/pytz";
     license = licenses.mit;
-    maintainers = with maintainers; [ dotlambda ];
+    maintainers = with maintainers; [
+      dotlambda
+      jherland
+    ];
   };
 }
diff --git a/pkgs/development/python-modules/pyvesync/default.nix b/pkgs/development/python-modules/pyvesync/default.nix
index fbc5ae395b98..70e1197a90a2 100644
--- a/pkgs/development/python-modules/pyvesync/default.nix
+++ b/pkgs/development/python-modules/pyvesync/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pyvesync";
-  version = "2.1.18";
+  version = "2.18";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "webdjoe";
     repo = "pyvesync";
     tag = version;
-    hash = "sha256-p46QVjJ8MzvsAu9JAQo4XN+z96arWLoJakdT81ITasU=";
+    hash = "sha256-bcjFa/6GgWk9UZLaB+oUOWVb6b7o0kKB2jzHr9I48eI=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/pyvisa-py/default.nix b/pkgs/development/python-modules/pyvisa-py/default.nix
index f432fa6c1112..aa05ec2c606e 100644
--- a/pkgs/development/python-modules/pyvisa-py/default.nix
+++ b/pkgs/development/python-modules/pyvisa-py/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "pyvisa-py";
-  version = "0.7.2";
+  version = "0.8.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "pyvisa";
     repo = "pyvisa-py";
     tag = version;
-    hash = "sha256-UFAKLrZ1ZrTmFXwVuyTCPVo3Y1YIDOvkx5krpsz71BM=";
+    hash = "sha256-bYxl7zJ36uorEasAKvPiVWLaG2ISQGBHrQZJcnkbfzU=";
   };
 
   nativeBuildInputs = [
@@ -53,7 +53,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Module that implements the Virtual Instrument Software Architecture";
     homepage = "https://github.com/pyvisa/pyvisa-py";
-    changelog = "https://github.com/pyvisa/pyvisa-py/blob/${version}/CHANGES";
+    changelog = "https://github.com/pyvisa/pyvisa-py/blob/${src.tag}/CHANGES";
     license = licenses.mit;
     maintainers = with maintainers; [ mvnetbiz ];
   };
diff --git a/pkgs/development/python-modules/pyvisa-sim/default.nix b/pkgs/development/python-modules/pyvisa-sim/default.nix
index 69e61ea9d034..0dc5ab72663f 100644
--- a/pkgs/development/python-modules/pyvisa-sim/default.nix
+++ b/pkgs/development/python-modules/pyvisa-sim/default.nix
@@ -15,24 +15,21 @@
 
 buildPythonPackage rec {
   pname = "pyvisa-sim";
-  version = "0.6.0";
-  format = "pyproject";
-
-  disabled = pythonOlder "3.8";
+  version = "0.7.0";
+  pyproject = true;
 
   src = fetchPypi {
-    pname = "PyVISA-sim";
+    pname = "pyvisa_sim";
     inherit version;
-    hash = "sha256-kHahaRKoEUtDxEsdMolPwfEy1DidiytxmvYiQeQhYcE=";
+    hash = "sha256-fVpnLKSK25SL5hbwYSuFMrHu5mSvZ8Gt8Qv/Tjv7+NA=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools
     setuptools-scm
-    wheel
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     pyvisa
     pyyaml
     stringparser
diff --git a/pkgs/development/python-modules/pyvisa/default.nix b/pkgs/development/python-modules/pyvisa/default.nix
index 3a7fea7b051f..465057dde14e 100644
--- a/pkgs/development/python-modules/pyvisa/default.nix
+++ b/pkgs/development/python-modules/pyvisa/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pyvisa";
-  version = "1.14.1";
+  version = "1.15.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "pyvisa";
     repo = "pyvisa";
     tag = version;
-    hash = "sha256-GKrgUK2nSZi+8oJoS45MjpU9+INEgcla9Kaw6ceNVp0=";
+    hash = "sha256-cjKOyBn5O7ThZI7pi6JXeLhe47xGbhQaSRcAqXb3lV8=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pyvmomi/default.nix b/pkgs/development/python-modules/pyvmomi/default.nix
index 5ebc09edb239..7c9102a7c0d2 100644
--- a/pkgs/development/python-modules/pyvmomi/default.nix
+++ b/pkgs/development/python-modules/pyvmomi/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pyvmomi";
-  version = "8.0.3.0.1";
+  version = "9.0.0.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "vmware";
     repo = "pyvmomi";
     tag = "v${version}";
-    hash = "sha256-wJe45r9fWNkg8oWJZ47bcqoWzOvxpO4soV2SU4N0tb0=";
+    hash = "sha256-4r0UtLR1dhhNQ+Lx12JiEozDAjMxPly+RR0LWRg/A4E=";
   };
 
   propagatedBuildInputs = [
@@ -46,7 +46,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python SDK for the VMware vSphere API that allows you to manage ESX, ESXi, and vCenter";
     homepage = "https://github.com/vmware/pyvmomi";
-    changelog = "https://github.com/vmware/pyvmomi/releases/tag/v${version}";
+    changelog = "https://github.com/vmware/pyvmomi/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/pywatchman/default.nix b/pkgs/development/python-modules/pywatchman/default.nix
index f51d3c2dbce5..27beb138785d 100644
--- a/pkgs/development/python-modules/pywatchman/default.nix
+++ b/pkgs/development/python-modules/pywatchman/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "pywatchman";
-  version = "2.0.0";
+  version = "3.0.0";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-JTVNnjZH+UQRpME+UQyDoc7swXl3sFJbpBsW5wGceww=";
+    hash = "sha256-79MqFzkaWHIRjFUEHacaIJYORrpLc0QMJO+sKH7qkR4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/pywavelets/default.nix b/pkgs/development/python-modules/pywavelets/default.nix
index 4bb23a6acd42..c61dff8b51ca 100644
--- a/pkgs/development/python-modules/pywavelets/default.nix
+++ b/pkgs/development/python-modules/pywavelets/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "pywavelets";
-  version = "1.8.0";
+  version = "1.9.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "PyWavelets";
     repo = "pywt";
     tag = "v${version}";
-    hash = "sha256-v5NkzgIztREYz2Idg0E3grejWhZ/5BX0nCexUX8XcTQ=";
+    hash = "sha256-UVQWZPuOyUPcWI3cV2u+jQyAZN/RV3aKAT6BQxqRE4M=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/pywebview/default.nix b/pkgs/development/python-modules/pywebview/default.nix
index ca01c3e7ca9f..b7b2096f27a9 100644
--- a/pkgs/development/python-modules/pywebview/default.nix
+++ b/pkgs/development/python-modules/pywebview/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "pywebview";
-  version = "5.3.2";
+  version = "5.4";
   pyproject = true;
 
   disabled = pythonOlder "3.5";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "r0x0r";
     repo = "pywebview";
     tag = version;
-    hash = "sha256-/jKauq+G3Nz91n/keTZGNDTaW5EhdyCx4c2Nylxqc+0=";
+    hash = "sha256-HQ95tg1BuOr+SyOEDCbIc6Xm2dzzWS0mMcnV4bHMNBs=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/pywikibot/default.nix b/pkgs/development/python-modules/pywikibot/default.nix
index 6c05e1e533a4..9375756f4eb2 100644
--- a/pkgs/development/python-modules/pywikibot/default.nix
+++ b/pkgs/development/python-modules/pywikibot/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "pywikibot";
-  version = "10.2.0";
+  version = "10.3.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pwXF2JgcK6rA1YNQ2VQ1svBDsc8xt3Xx2+o0Xr+cOZM=";
+    hash = "sha256-QXgv++Vr2HYzoAAwk2eVg/EnKqX9EFUJo6OBHvlYbjQ=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/pyyaml-env-tag/default.nix b/pkgs/development/python-modules/pyyaml-env-tag/default.nix
index 8167c85c6534..69014895c8ce 100644
--- a/pkgs/development/python-modules/pyyaml-env-tag/default.nix
+++ b/pkgs/development/python-modules/pyyaml-env-tag/default.nix
@@ -2,24 +2,25 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  pythonOlder,
   pyyaml,
   pytestCheckHook,
+  setuptools,
 }:
 
 buildPythonPackage rec {
   pname = "pyyaml-env-tag";
-  version = "0.1";
-  format = "setuptools";
-  disabled = pythonOlder "3.6";
+  version = "1.1";
+  pyproject = true;
 
   src = fetchPypi {
     pname = "pyyaml_env_tag";
     inherit version;
-    sha256 = "1nsva88jsmwn0cb9jnrfiz4dvs9xakkpgfii7g1xwkx1pmsjc2bh";
+    sha256 = "sha256-LrOLdaLSHuBHXW2X7BnGMoen4UAjHkIUlp0OrJI81/8=";
   };
 
-  propagatedBuildInputs = [ pyyaml ];
+  build-system = [ setuptools ];
+
+  dependencies = [ pyyaml ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/pyyaml-ft/default.nix b/pkgs/development/python-modules/pyyaml-ft/default.nix
index 65061acf48ec..15abcf542c44 100644
--- a/pkgs/development/python-modules/pyyaml-ft/default.nix
+++ b/pkgs/development/python-modules/pyyaml-ft/default.nix
@@ -1,6 +1,6 @@
 {
   buildPythonPackage,
-  cython_3_1,
+  cython,
   fetchFromGitHub,
   lib,
   libyaml,
@@ -24,7 +24,7 @@ buildPythonPackage rec {
   };
 
   build-system = [
-    cython_3_1
+    cython
     setuptools
   ];
 
diff --git a/pkgs/development/python-modules/pyzmq/default.nix b/pkgs/development/python-modules/pyzmq/default.nix
index 40789b68dbc0..723997fc32ce 100644
--- a/pkgs/development/python-modules/pyzmq/default.nix
+++ b/pkgs/development/python-modules/pyzmq/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "pyzmq";
-  version = "26.4.0";
+  version = "27.0.1";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-S9E/hfgJYvkaZRpzVv4EcnkaX3qS8ieCK1rPRHlcYm0=";
+    hash = "sha256-RcVJIEvCDnSE/9JVX2zwLlckQOzy873WDUQEsg/d9ks=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/qcodes/default.nix b/pkgs/development/python-modules/qcodes/default.nix
index 451a7f43bb45..337f078f8855 100644
--- a/pkgs/development/python-modules/qcodes/default.nix
+++ b/pkgs/development/python-modules/qcodes/default.nix
@@ -61,14 +61,14 @@
 
 buildPythonPackage rec {
   pname = "qcodes";
-  version = "0.52.0";
+  version = "0.53.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "microsoft";
     repo = "Qcodes";
     tag = "v${version}";
-    hash = "sha256-AQBzYKD4RsPQBtq/FxFwYnSUf8wW87JOb2cOnk9MHDY=";
+    hash = "sha256-uXVL25U7szJF/v7OEsB9Ww1h6ziBxsMJdqhZG5qn0VU=";
   };
 
   postPatch = ''
@@ -200,7 +200,7 @@ buildPythonPackage rec {
 
   meta = {
     description = "Python-based data acquisition framework";
-    changelog = "https://github.com/QCoDeS/Qcodes/releases/tag/v${version}";
+    changelog = "https://github.com/QCoDeS/Qcodes/releases/tag/${src.tag}";
     downloadPage = "https://github.com/QCoDeS/Qcodes";
     homepage = "https://qcodes.github.io/Qcodes/";
     license = lib.licenses.mit;
diff --git a/pkgs/development/python-modules/qiskit-aer/default.nix b/pkgs/development/python-modules/qiskit-aer/default.nix
index ef15dc42303c..6e208ebb8069 100644
--- a/pkgs/development/python-modules/qiskit-aer/default.nix
+++ b/pkgs/development/python-modules/qiskit-aer/default.nix
@@ -29,7 +29,7 @@
 
 buildPythonPackage rec {
   pname = "qiskit-aer";
-  version = "0.16.0.1";
+  version = "0.17.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -38,7 +38,7 @@ buildPythonPackage rec {
     owner = "Qiskit";
     repo = "qiskit-aer";
     tag = version;
-    hash = "sha256-YF5X//X0fvJyALEB4gqsKRNWSoEsOrZFLVQUgHOA+0A=";
+    hash = "sha256-jvapuARJUHgAKFUzGb5MUft01LNefVIXtStJqFnCo90=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/qiskit-machine-learning/default.nix b/pkgs/development/python-modules/qiskit-machine-learning/default.nix
index 4a872f34f554..559d858e0fbb 100644
--- a/pkgs/development/python-modules/qiskit-machine-learning/default.nix
+++ b/pkgs/development/python-modules/qiskit-machine-learning/default.nix
@@ -24,7 +24,7 @@
 
 buildPythonPackage rec {
   pname = "qiskit-machine-learning";
-  version = "0.8.2";
+  version = "0.8.3";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     owner = "qiskit";
     repo = pname;
     tag = version;
-    hash = "sha256-dvGUtB7R44B+DYZKl4R2Q0GdvLTjVKWD0KmuyCoaOSc=";
+    hash = "sha256-XnLCejK6m8p/OC5gKCoP1UXVblISChu3lKF8BnrnRbk=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/qiskit/default.nix b/pkgs/development/python-modules/qiskit/default.nix
index ac39260c0df0..38bd460cff8a 100644
--- a/pkgs/development/python-modules/qiskit/default.nix
+++ b/pkgs/development/python-modules/qiskit/default.nix
@@ -33,7 +33,7 @@ in
 buildPythonPackage rec {
   pname = "qiskit";
   # NOTE: This version denotes a specific set of subpackages. See https://qiskit.org/documentation/release_notes.html#version-history
-  version = "1.3.1";
+  version = "2.1.1";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -42,7 +42,7 @@ buildPythonPackage rec {
     owner = "Qiskit";
     repo = "qiskit";
     tag = version;
-    hash = "sha256-Dqd8ywnACfvrfY7Fzw5zYwhlsDvHZErPGvxBPs2pS04=";
+    hash = "sha256-WHfsl/T4lmnvkGY7gF5PStilGq3G66TZG9oB1tKwuOQ=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/qnapstats/default.nix b/pkgs/development/python-modules/qnapstats/default.nix
index 2cfa9edc6593..1e2033a59191 100644
--- a/pkgs/development/python-modules/qnapstats/default.nix
+++ b/pkgs/development/python-modules/qnapstats/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "qnapstats";
-  version = "0.5.0";
+  version = "0.6.0";
 
   format = "setuptools";
 
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "colinodell";
     repo = "python-qnapstats";
     tag = version;
-    hash = "sha256-dpxl6a61h8zB7eS/2lxG+2//bOTzV6s4T1W+DVj0fnI=";
+    hash = "sha256-4zGCMwuPL9QFVLgyZ6/aV9YBQJBomPkX34C7ULEd4Fw=";
   };
 
   propagatedBuildInputs = [
@@ -28,6 +28,10 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ responses ];
 
+  # File "/build/source/tests/test-models.py", line 124, in <module>
+  #   assert json.dumps(qnap.get_system_stats(), sort_keys=True) == systemstats
+  doCheck = false;
+
   checkPhase = ''
     runHook preCheck
 
diff --git a/pkgs/development/python-modules/qt-material/default.nix b/pkgs/development/python-modules/qt-material/default.nix
index 2a6d64c55e22..24c279dc3e89 100644
--- a/pkgs/development/python-modules/qt-material/default.nix
+++ b/pkgs/development/python-modules/qt-material/default.nix
@@ -7,12 +7,12 @@
 
 buildPythonPackage rec {
   pname = "qt-material";
-  version = "2.14";
+  version = "2.17";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-tdu1relyF8964za7fAR8kL6zncfyBIpJjJFq1fL3riM=";
+    hash = "sha256-tQCgwfXvj0aozwN9GqW9+epOthgYC2MyU5373QZHrQ0=";
   };
 
   propagatedBuildInputs = [ jinja2 ];
diff --git a/pkgs/development/python-modules/rapidfuzz/default.nix b/pkgs/development/python-modules/rapidfuzz/default.nix
index d7ac4bcde75a..9803f449dc97 100644
--- a/pkgs/development/python-modules/rapidfuzz/default.nix
+++ b/pkgs/development/python-modules/rapidfuzz/default.nix
@@ -37,6 +37,11 @@ buildPythonPackage rec {
     })
   ];
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "Cython >=3.0.12, <3.1.0" Cython
+  '';
+
   build-system = [
     cmake
     cython
diff --git a/pkgs/development/python-modules/rapidgzip/default.nix b/pkgs/development/python-modules/rapidgzip/default.nix
index 230f94c0ad73..f3dc069b9fff 100644
--- a/pkgs/development/python-modules/rapidgzip/default.nix
+++ b/pkgs/development/python-modules/rapidgzip/default.nix
@@ -10,19 +10,21 @@
 
 buildPythonPackage rec {
   pname = "rapidgzip";
-  version = "0.14.4";
+  version = "0.14.5";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-sHtL5TKVR6iP9pRg0/omw0gXqxgEQG8VcTAzkL3jjWs=";
+    hash = "sha256-+u1GAToaYqUZPElhWolmg+pcFO1HRLy0vRhpsUIFUdg=";
   };
 
   prePatch = ''
     # pythonRelaxDeps doesn't work here
-    substituteInPlace pyproject.toml --replace-fail "setuptools >= 61.2, < 72" "setuptools"
+    substituteInPlace pyproject.toml \
+      --replace-fail "setuptools >= 61.2, < 72" "setuptools" \
+      --replace-fail "cython >= 3, < 3.1" cython
   '';
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/rapidocr-onnxruntime/default.nix b/pkgs/development/python-modules/rapidocr-onnxruntime/default.nix
index e0af42135d96..1ead42bb779b 100644
--- a/pkgs/development/python-modules/rapidocr-onnxruntime/default.nix
+++ b/pkgs/development/python-modules/rapidocr-onnxruntime/default.nix
@@ -21,13 +21,13 @@
   requests,
 }:
 let
-  version = "2.1.0";
+  version = "3.3.1";
 
   src = fetchFromGitHub {
     owner = "RapidAI";
     repo = "RapidOCR";
     tag = "v${version}";
-    hash = "sha256-4R2rOCfnhElII0+a5hnvbn+kKQLEtH1jBvfFdxpLEBk=";
+    hash = "sha256-EgVBMQX+E8ejUd/6FUQ+uJoWjrQSVznpPcc2gA2wAOE=";
   };
 
   models =
diff --git a/pkgs/development/python-modules/rasterio/default.nix b/pkgs/development/python-modules/rasterio/default.nix
index 47ef8ed31560..9fc55c214146 100644
--- a/pkgs/development/python-modules/rasterio/default.nix
+++ b/pkgs/development/python-modules/rasterio/default.nix
@@ -45,6 +45,11 @@ buildPythonPackage rec {
     hash = "sha256-InejYBRa4i0E2GxEWbtBpaErtcoYrhtypAlRtMlUoDk=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail "cython~=3.0.2" cython
+  '';
+
   nativeBuildInputs = [
     cython
     gdal
diff --git a/pkgs/development/python-modules/ratarmount/default.nix b/pkgs/development/python-modules/ratarmount/default.nix
index 8cc31927bcf7..c6ae9038fb85 100644
--- a/pkgs/development/python-modules/ratarmount/default.nix
+++ b/pkgs/development/python-modules/ratarmount/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "ratarmount";
-  version = "1.0.0";
+  version = "1.1.2";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-cXm301LMEsiE1eKJO70gTy7asdZ5CKnKtxLinW2+iJ4=";
+    hash = "sha256-XiwtmZ7HGZwjJJrUD3TOP3o19RBwB/Yu09xdwK13+hk=";
   };
 
   pythonRelaxDeps = [ "python-xz" ];
diff --git a/pkgs/development/python-modules/ratarmountcore/default.nix b/pkgs/development/python-modules/ratarmountcore/default.nix
index 3d5ef3529f57..c0d4e5c06dc0 100644
--- a/pkgs/development/python-modules/ratarmountcore/default.nix
+++ b/pkgs/development/python-modules/ratarmountcore/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "ratarmountcore";
-  version = "1.0.0";
+  version = "1.1.2";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "mxmlnkn";
     repo = "ratarmount";
     tag = "v${version}";
-    hash = "sha256-nTKbwZoD7nf3cKFJOR5p6ZRFHsKVeJXboOAhPjvnQAM=";
+    hash = "sha256-8DjmYYTb0BR5KvtSeI2s7VtYdbRSI+QCjhZfDwqnk3M=";
     fetchSubmodules = true;
   };
 
diff --git a/pkgs/development/python-modules/rawpy/default.nix b/pkgs/development/python-modules/rawpy/default.nix
index 6270febe7bfa..ed82047d9a29 100644
--- a/pkgs/development/python-modules/rawpy/default.nix
+++ b/pkgs/development/python-modules/rawpy/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "rawpy";
-  version = "0.24.0";
+  version = "0.25.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "letmaik";
     repo = "rawpy";
     tag = "v${version}";
-    hash = "sha256-u/KWbviyhbMts40Gc/9shXSESwihWZQQaf3Z44gMgvs=";
+    hash = "sha256-d3TxPW3GdCQT8bBbnveSxtWHkf5zinM8nSy4m/P7m7Q=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/recline/default.nix b/pkgs/development/python-modules/recline/default.nix
index d7c3d896ee28..3b88fda29ef9 100644
--- a/pkgs/development/python-modules/recline/default.nix
+++ b/pkgs/development/python-modules/recline/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "recline";
-  version = "2024.7.1";
+  version = "2025.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "NetApp";
     repo = "recline";
     tag = "v${version}";
-    sha256 = "sha256-Qc4oofuhSZ2S5zuCY9Ce9ISldYI3MDUJXFc8VcXdLIU=";
+    sha256 = "sha256-WBMt5jDPCBmTgVdYDN662uU2HVjB1U3GYJwn0P56WsI=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/redis-om/default.nix b/pkgs/development/python-modules/redis-om/default.nix
index be929f9cd306..5800bcb20004 100644
--- a/pkgs/development/python-modules/redis-om/default.nix
+++ b/pkgs/development/python-modules/redis-om/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "redis-om";
-  version = "0.3.3";
+  version = "0.3.5";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "redis";
     repo = "redis-om-python";
     tag = "v${version}";
-    hash = "sha256-Pp404HaFpYEPie9xknoabotFrqcI2ibDlPTM+MmnMbg=";
+    hash = "sha256-TfwMYDZYDKCdI5i8izBVZaXN5GC/Skhkl905c/DHuXY=";
   };
 
   build-system = [
@@ -77,7 +77,7 @@ buildPythonPackage rec {
     description = "Object mapping, and more, for Redis and Python";
     mainProgram = "migrate";
     homepage = "https://github.com/redis/redis-om-python";
-    changelog = "https://github.com/redis/redis-om-python/releases/tag/v${version}";
+    changelog = "https://github.com/redis/redis-om-python/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ natsukium ];
   };
diff --git a/pkgs/development/python-modules/redis/default.nix b/pkgs/development/python-modules/redis/default.nix
index 64ec9fa2f62a..35f2e517fc3a 100644
--- a/pkgs/development/python-modules/redis/default.nix
+++ b/pkgs/development/python-modules/redis/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "redis";
-  version = "6.1.0";
+  version = "6.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-ySjiZ61p0waa8oqYI6B3Ju33LH43dk9D3AEj83kowHU=";
+    hash = "sha256-6CHxKbdd3my5ndNeXHboxJUSpaDY39xWCy+9RLhcqXc=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/reflex-chakra/default.nix b/pkgs/development/python-modules/reflex-chakra/default.nix
index 188c96298e7e..05419d4d0a34 100644
--- a/pkgs/development/python-modules/reflex-chakra/default.nix
+++ b/pkgs/development/python-modules/reflex-chakra/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "reflex-chakra";
-  version = "0.7.1";
+  version = "0.8.2post1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "reflex-dev";
     repo = "reflex-chakra";
     tag = "v${version}";
-    hash = "sha256-dAenwsFhRj9BzdGyaC38TwBWog95H0mSA0ullt4otHA=";
+    hash = "sha256-DugZRZpGP90EFkBjpAS1XkjrNPG6WWwCQPUcEZJ0ff8=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/reflex-hosting-cli/default.nix b/pkgs/development/python-modules/reflex-hosting-cli/default.nix
index aea9e53115d5..ecf9faf897a0 100644
--- a/pkgs/development/python-modules/reflex-hosting-cli/default.nix
+++ b/pkgs/development/python-modules/reflex-hosting-cli/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "reflex-hosting-cli";
-  version = "0.1.50";
+  version = "0.1.53";
   pyproject = true;
 
   # source is not published https://github.com/reflex-dev/reflex/issues/3762
   src = fetchPypi {
     pname = "reflex_hosting_cli";
     inherit version;
-    hash = "sha256-1ZTTc09P/0rTNhiqsNDB2RMLcUjKt1rIWtufakkFWkg=";
+    hash = "sha256-pxUnZzAuecgzbEi+PNXOry9yRjAsPhzobjSV7+PPDuk=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/reflex/default.nix b/pkgs/development/python-modules/reflex/default.nix
index 83c179a05136..343e33431531 100644
--- a/pkgs/development/python-modules/reflex/default.nix
+++ b/pkgs/development/python-modules/reflex/default.nix
@@ -43,14 +43,14 @@
 
 buildPythonPackage rec {
   pname = "reflex";
-  version = "0.7.14";
+  version = "0.8.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "reflex-dev";
     repo = "reflex";
     tag = "v${version}";
-    hash = "sha256-yuVBQYP0YlvAIWF/+oSfCLbfj1GLtnYajU3WoolyTjY=";
+    hash = "sha256-OBGDOVWjm3DbN41e3/RrOvCBvd5Uv6VyOvPA8/FWsiU=";
   };
 
   # 'rich' is also somehow checked when building the wheel,
diff --git a/pkgs/development/python-modules/regex/default.nix b/pkgs/development/python-modules/regex/default.nix
index 8c9810bdd5fa..7d50f3051cbd 100644
--- a/pkgs/development/python-modules/regex/default.nix
+++ b/pkgs/development/python-modules/regex/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "regex";
-  version = "2024.11.6";
+  version = "2025.7.34";
   format = "setuptools";
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-erFZsGPFKgMzyITkZ5+NeoURLuMHj+PZAEst2HVYVRk=";
+    hash = "sha256-nq2XZSF6/QSoaCLfzU7SdH3+Qm6IfaQTsV/wrCRX4ho=";
   };
 
   checkPhase = ''
diff --git a/pkgs/development/python-modules/remarshal/default.nix b/pkgs/development/python-modules/remarshal/default.nix
index 45b745d0f887..e6d70e5dad6a 100644
--- a/pkgs/development/python-modules/remarshal/default.nix
+++ b/pkgs/development/python-modules/remarshal/default.nix
@@ -22,14 +22,14 @@
 
 buildPythonPackage rec {
   pname = "remarshal";
-  version = "1.0.0";
+  version = "1.0.1"; # test with `nix-build pkgs/pkgs-lib/format`
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "dbohdan";
     repo = "remarshal";
     tag = "v${version}";
-    hash = "sha256-14vkLX7wKi+AYv2wPeHJ7MhKBKp+GB3oHWqxiPdkQhs=";
+    hash = "sha256-7Gng/Oc9dwtWx4Xej6hf5IuUGM9/E9Hk9QTntqWk/Z0=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/rencode/default.nix b/pkgs/development/python-modules/rencode/default.nix
index 4c1857e1b70b..0d8d495eb41c 100644
--- a/pkgs/development/python-modules/rencode/default.nix
+++ b/pkgs/development/python-modules/rencode/default.nix
@@ -3,23 +3,28 @@
   buildPythonPackage,
   fetchFromGitHub,
   cython,
+  poetry-core,
+  setuptools,
   pytestCheckHook,
 }:
 
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "rencode";
-  version = "unstable-2021-08-10";
-
-  format = "setuptools";
+  version = "1.0.8";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "aresch";
     repo = "rencode";
-    rev = "572ff74586d9b1daab904c6f7f7009ce0143bb75";
-    hash = "sha256-cL1hV3RMDuSdcjpPXXDYIEbzQrxiPeRs82PU8HTEQYk=";
+    tag = "v${version}";
+    hash = "sha256-k2b6DoKwNeQBkmqSRXqaRTjK7CVX6IKuXCLG9lBdLLY=";
   };
 
-  nativeBuildInputs = [ cython ];
+  nativeBuildInputs = [
+    poetry-core
+    setuptools
+    cython
+  ];
 
   nativeCheckInputs = [ pytestCheckHook ];
 
diff --git a/pkgs/development/python-modules/repl-python-wakatime/default.nix b/pkgs/development/python-modules/repl-python-wakatime/default.nix
index 72bdb809a8cb..9ec6223f9296 100644
--- a/pkgs/development/python-modules/repl-python-wakatime/default.nix
+++ b/pkgs/development/python-modules/repl-python-wakatime/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "repl-python-wakatime";
-  version = "0.0.11";
+  version = "0.0.12";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-HoCdeo03Lf3g5Xg0GgAyWOu2PtGqy33vg5bQrfkEPkE=";
+    hash = "sha256-U5kg4GbfhyHno1DNbF1uOfHOjgCstYdyDgvwEXqnCZg=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/reportlab/default.nix b/pkgs/development/python-modules/reportlab/default.nix
index 04d6fada9d2d..c6bed3f383fb 100644
--- a/pkgs/development/python-modules/reportlab/default.nix
+++ b/pkgs/development/python-modules/reportlab/default.nix
@@ -1,7 +1,7 @@
 {
   lib,
   buildPythonPackage,
-  chardet,
+  charset-normalizer,
   fetchPypi,
   freetype,
   pillow,
@@ -17,7 +17,7 @@ let
 in
 buildPythonPackage rec {
   pname = "reportlab";
-  version = "4.4.1";
+  version = "4.4.3";
   pyproject = true;
 
   # See https://bitbucket.org/pypy/compatibility/wiki/reportlab%20toolkit
@@ -25,7 +25,7 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-X5ufwLekjokSwlzPadJrgpgKsNpxjk9YP6cg6Pj1Bz8=";
+    hash = "sha256-BzsJddq2lTas0yUYWOawUk7T4IfnHx0NGJWstQrPnHs=";
   };
 
   postPatch = ''
@@ -39,12 +39,12 @@ buildPythonPackage rec {
     rm tests/test_graphics_charts.py
   '';
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [ setuptools ];
 
   buildInputs = [ ft ];
 
-  propagatedBuildInputs = [
-    chardet
+  dependencies = [
+    charset-normalizer
     pillow
   ];
 
diff --git a/pkgs/development/python-modules/reproject/default.nix b/pkgs/development/python-modules/reproject/default.nix
index b81f576584f5..46f718077684 100644
--- a/pkgs/development/python-modules/reproject/default.nix
+++ b/pkgs/development/python-modules/reproject/default.nix
@@ -7,6 +7,7 @@
   cloudpickle,
   cython,
   dask,
+  extension-helpers,
   fetchPypi,
   fsspec,
   numpy,
@@ -20,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "reproject";
-  version = "0.14.1";
+  version = "0.15.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-U8jqJ5uLVX8zoeQwr14FPNdHACRA4HK65q2TAtRr5Xk=";
+    hash = "sha256-l9pmxtXIGnl8T8fCsUp/5y3kReg3MXdaN0i2rpcEqE4=";
   };
 
   postPatch = ''
@@ -47,6 +48,7 @@ buildPythonPackage rec {
     astropy-healpix
     cloudpickle
     dask
+    extension-helpers
     fsspec
     numpy
     scipy
diff --git a/pkgs/development/python-modules/reptor/default.nix b/pkgs/development/python-modules/reptor/default.nix
index 168ee1054606..4611e85cf013 100644
--- a/pkgs/development/python-modules/reptor/default.nix
+++ b/pkgs/development/python-modules/reptor/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "reptor";
-  version = "0.31";
+  version = "0.32";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Syslifters";
     repo = "reptor";
     tag = version;
-    hash = "sha256-AbrfQJQvKXpV4FrhkGZOLYX3px9dzr9whJZwzR/7UYM=";
+    hash = "sha256-nNG4rQHloOqcPZPnvw3hbw0+wCbB2XAdQ5/XnJtCHnE=";
   };
 
   pythonRelaxDeps = true;
diff --git a/pkgs/development/python-modules/reqif/default.nix b/pkgs/development/python-modules/reqif/default.nix
index aa3ab6303cc6..b45ca4d2bad6 100644
--- a/pkgs/development/python-modules/reqif/default.nix
+++ b/pkgs/development/python-modules/reqif/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "reqif";
-  version = "0.0.42";
+  version = "0.0.46";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "strictdoc-project";
     repo = "reqif";
     tag = version;
-    hash = "sha256-cQhis7jrcly3cw2LRv7hpPBFAB0Uag69czf+wJvbh/Q=";
+    hash = "sha256-QI+OhhV+jKw3g2erSCdTj10JW+XFQQyXuAC0LAnts7c=";
   };
 
   postPatch = ''
@@ -51,7 +51,7 @@ buildPythonPackage rec {
     description = "Python library for ReqIF format";
     mainProgram = "reqif";
     homepage = "https://github.com/strictdoc-project/reqif";
-    changelog = "https://github.com/strictdoc-project/reqif/releases/tag/${version}";
+    changelog = "https://github.com/strictdoc-project/reqif/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ yuu ];
   };
diff --git a/pkgs/development/python-modules/requests-oauthlib/default.nix b/pkgs/development/python-modules/requests-oauthlib/default.nix
index 27b2ae885573..2cb1259f9315 100644
--- a/pkgs/development/python-modules/requests-oauthlib/default.nix
+++ b/pkgs/development/python-modules/requests-oauthlib/default.nix
@@ -30,11 +30,13 @@ buildPythonPackage rec {
     requests-mock
   ];
 
-  # Exclude tests which require network access
   disabledTests = [
+    # Exclude tests which require network access
     "testCanPostBinaryData"
     "test_content_type_override"
     "test_url_is_native_str"
+    # too narrow time comparison
+    "test_fetch_access_token"
   ];
 
   # Requires selenium and chrome
diff --git a/pkgs/development/python-modules/retrying/default.nix b/pkgs/development/python-modules/retrying/default.nix
index ebef0e8ee677..6339e060e364 100644
--- a/pkgs/development/python-modules/retrying/default.nix
+++ b/pkgs/development/python-modules/retrying/default.nix
@@ -2,23 +2,26 @@
   lib,
   buildPythonPackage,
   fetchPypi,
+  setuptools,
   six,
   pythonOlder,
 }:
 
 buildPythonPackage rec {
   pname = "retrying";
-  version = "1.4.1";
-  format = "setuptools";
+  version = "1.4.2";
+  pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-TSBuDtKv9e8vPNhnq7lRHp6PMRJ8Wsog8dUkbkdpA7A=";
+    hash = "sha256-0QLnXVPY0wuIVi1FNh1sbJNNoG+rMb2BwEIKy5eoujk=";
   };
 
-  propagatedBuildInputs = [ six ];
+  build-system = [ setuptools ];
+
+  dependencies = [ six ];
 
   # doesn't ship tests in tarball
   doCheck = false;
diff --git a/pkgs/development/python-modules/returns/default.nix b/pkgs/development/python-modules/returns/default.nix
index 82e00f458316..dc2a443f4a95 100644
--- a/pkgs/development/python-modules/returns/default.nix
+++ b/pkgs/development/python-modules/returns/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "returns";
-  version = "0.24.0";
+  version = "0.26.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "dry-python";
     repo = "returns";
     tag = version;
-    hash = "sha256-qmBxW1XxUlFpAqf2t2ix01TN5NSxOtnYqLyE5ovZU58=";
+    hash = "sha256-VQzsa/uNTQVND0kc20d25to/6LELEiS3cqvG7a1kDw4=";
   };
 
   postPatch = ''
@@ -63,7 +63,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Make your functions return something meaningful, typed, and safe";
     homepage = "https://github.com/dry-python/returns";
-    changelog = "https://github.com/dry-python/returns/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/dry-python/returns/blob/${src.tag}/CHANGELOG.md";
     license = licenses.bsd2;
     maintainers = with maintainers; [ jessemoore ];
   };
diff --git a/pkgs/development/python-modules/reverse-geocode/default.nix b/pkgs/development/python-modules/reverse-geocode/default.nix
index 8c87d9b7c5b0..04b6ff052ac2 100644
--- a/pkgs/development/python-modules/reverse-geocode/default.nix
+++ b/pkgs/development/python-modules/reverse-geocode/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "reverse-geocode";
-  version = "1.6.5";
+  version = "1.6.6";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "reverse_geocode";
     inherit version;
-    hash = "sha256-AyqkLnbHa8ZylVfrJHpsxLeBfLTl6u9IQ3EV8grXrkE=";
+    hash = "sha256-FBZYFYFsxjnddOtmCnTkZK7rzR0IFN50qJfWIHHJnyo=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/rfc3987-syntax/default.nix b/pkgs/development/python-modules/rfc3987-syntax/default.nix
new file mode 100644
index 000000000000..6de67fae9bde
--- /dev/null
+++ b/pkgs/development/python-modules/rfc3987-syntax/default.nix
@@ -0,0 +1,45 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+  hatchling,
+  lark,
+  pytestCheckHook,
+}:
+
+buildPythonPackage rec {
+  pname = "rfc3987-syntax";
+  version = "1.1.0";
+  pyproject = true;
+
+  src = fetchFromGitHub {
+    owner = "willynilly";
+    repo = "rfc3987-syntax";
+    tag = "v${version}";
+    hash = "sha256-6jA/x8KnwBvyW2k384/EB/NJ8BmJJTEHA8YUlQP+1Y4=";
+  };
+
+  build-system = [
+    hatchling
+  ];
+
+  dependencies = [
+    lark
+  ];
+
+  nativeCheckInputs = [
+    pytestCheckHook
+  ];
+
+  pythonImportsCheck = [
+    "rfc3987_syntax"
+  ];
+
+  meta = {
+    changelog = "https://github.com/willynilly/rfc3987-syntax/releases/tag/${src.tag}";
+    description = "Helper functions to syntactically validate strings according to RFC 3987";
+    homepage = "https://github.com/willynilly/rfc3987-syntax";
+    license = lib.licenses.mit;
+    maintainers = with lib.maintainers; [ ];
+  };
+}
diff --git a/pkgs/development/python-modules/rich-toolkit/default.nix b/pkgs/development/python-modules/rich-toolkit/default.nix
index 12a34cb96ccf..f80020bdd9a9 100644
--- a/pkgs/development/python-modules/rich-toolkit/default.nix
+++ b/pkgs/development/python-modules/rich-toolkit/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "rich-toolkit";
-  version = "0.14.6";
+  version = "0.14.9";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "patrick91";
     repo = "rich-toolkit";
     tag = "v${version}";
-    hash = "sha256-SHQZ0idEx/zDEtP0xQoJg7eUT8+SqLdWljxfTgXzjkk=";
+    hash = "sha256-bX6HqUwFkXXc2Z1LF6BSVBEOl2UUJE9pCBKsfOxUoc0=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/rio-tiler/default.nix b/pkgs/development/python-modules/rio-tiler/default.nix
index 18c173923161..1be8c56cf9ac 100644
--- a/pkgs/development/python-modules/rio-tiler/default.nix
+++ b/pkgs/development/python-modules/rio-tiler/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "rio-tiler";
-  version = "7.3.0";
+  version = "7.8.1";
   pyproject = true;
   disabled = pythonOlder "3.8";
 
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "cogeotiff";
     repo = "rio-tiler";
     tag = version;
-    hash = "sha256-8Ly1QKKFzct0CPAN/54/kzNUE2FPiwvM+EqmX1utboU=";
+    hash = "sha256-w7uw5PY3uiJmxsgSB1YDbtG7IY1pd4WU3JExZRc40gs=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/rlax/default.nix b/pkgs/development/python-modules/rlax/default.nix
index 7d800cc5e62f..b6a8a8c0a753 100644
--- a/pkgs/development/python-modules/rlax/default.nix
+++ b/pkgs/development/python-modules/rlax/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "rlax";
-  version = "0.1.6";
+  version = "0.1.7";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "google-deepmind";
     repo = "rlax";
     tag = "v${version}";
-    hash = "sha256-v2Lbzya+E9d7tlUVlQQa4fuPp2q3E309Qvyt70mcdb0=";
+    hash = "sha256-w5vhXBMUlcqlLTKA58QgQ4pxyGs3etxJLIFUVPhE7H8=";
   };
 
   # TODO: remove these patches at the next release (already on master)
@@ -111,7 +111,7 @@ buildPythonPackage rec {
   meta = {
     description = "Library of reinforcement learning building blocks in JAX";
     homepage = "https://github.com/deepmind/rlax";
-    changelog = "https://github.com/google-deepmind/rlax/releases/tag/v${version}";
+    changelog = "https://github.com/google-deepmind/rlax/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ onny ];
   };
diff --git a/pkgs/development/python-modules/roadtx/default.nix b/pkgs/development/python-modules/roadtx/default.nix
index 67313581adb6..bdd0c68c8b17 100644
--- a/pkgs/development/python-modules/roadtx/default.nix
+++ b/pkgs/development/python-modules/roadtx/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "roadtx";
-  version = "1.17.0";
+  version = "1.18.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-C/s5zNvqREDc6r9EdPrN4+L913XWYTniKQVbaosh9iE=";
+    hash = "sha256-tJLsxo8XQ0FGyob2SSpjvN9RgVYYhDxGcbP6jytcjaU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/robotstatuschecker/default.nix b/pkgs/development/python-modules/robotstatuschecker/default.nix
index 95efb791fe19..69ea26d867df 100644
--- a/pkgs/development/python-modules/robotstatuschecker/default.nix
+++ b/pkgs/development/python-modules/robotstatuschecker/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "robotstatuschecker";
-  version = "3.0.1";
+  version = "4.1.1";
   pyproject = true;
 
   # no tests included in PyPI tarball
@@ -17,7 +17,7 @@ buildPythonPackage rec {
     owner = "robotframework";
     repo = "statuschecker";
     tag = "v${version}";
-    hash = "sha256-yW6353gDwo/IzoWOB8oelaS6IUbvTtwwDT05yD7w6UA=";
+    hash = "sha256-YyiGd3XSIe+4PEL2l9LYDGH3lt1iRAAJflcBGYXaBzY=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/rotary-embedding-torch/default.nix b/pkgs/development/python-modules/rotary-embedding-torch/default.nix
index 6ddff713ea0f..6668fde9720a 100644
--- a/pkgs/development/python-modules/rotary-embedding-torch/default.nix
+++ b/pkgs/development/python-modules/rotary-embedding-torch/default.nix
@@ -15,14 +15,14 @@
 
 buildPythonPackage rec {
   pname = "rotary-embedding-torch";
-  version = "0.8.7";
+  version = "0.8.9";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lucidrains";
     repo = "rotary-embedding-torch";
     tag = version;
-    hash = "sha256-xnLZ19IH6ellTmOjj7XVZ21Kly+Exe3ZQwaGzhSRGIA=";
+    hash = "sha256-mPiOtEmRtn73KGoYMum80q0iETJa9zZW9KIWL8O0dnM=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/rpy2/default.nix b/pkgs/development/python-modules/rpy2/default.nix
index 8a6a5fe9bcaa..0f6b273fa3ab 100644
--- a/pkgs/development/python-modules/rpy2/default.nix
+++ b/pkgs/development/python-modules/rpy2/default.nix
@@ -27,14 +27,14 @@
 }:
 
 buildPythonPackage rec {
-  version = "3.5.17";
+  version = "3.6.2";
   format = "setuptools";
   pname = "rpy2";
 
   disabled = isPyPy;
   src = fetchPypi {
     inherit version pname;
-    hash = "sha256-2/8Iww89eRYZImI4WKWztoo/uo7hdH1q9BvEumjz1YI=";
+    hash = "sha256-F06ld2qR0Ds13VYRiJlg4PVFHp0KvqSr/IwL5qhTd9A=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/rq/default.nix b/pkgs/development/python-modules/rq/default.nix
index fd802dd70f70..a18a535ddd91 100644
--- a/pkgs/development/python-modules/rq/default.nix
+++ b/pkgs/development/python-modules/rq/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "rq";
-  version = "2.4";
+  version = "2.4.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "rq";
     repo = "rq";
     tag = "v${version}";
-    hash = "sha256-7aq9JeyM+IjlRPgh4gs1DmkF0hU5EasgTuUPPlf8960=";
+    hash = "sha256-CtxirZg6WNQpTMoXQRvB8i/KB3r58WlKh+wjBvyVMMs=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/rtslib-fb/default.nix b/pkgs/development/python-modules/rtslib-fb/default.nix
index ab2f3b9d5553..5704aec8ddb7 100644
--- a/pkgs/development/python-modules/rtslib-fb/default.nix
+++ b/pkgs/development/python-modules/rtslib-fb/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "rtslib-fb";
-  version = "2.2.2";
+  version = "2.2.3";
   pyproject = true;
 
   # TypeError: 'method' object does not support the context manager protocol
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "open-iscsi";
     repo = "rtslib-fb";
     tag = "v${version}";
-    hash = "sha256-FuXO/yGZBR+QRvB5s1tE77hjnisSfjjHSCPLvGJOYdM=";
+    hash = "sha256-UGRQMdOkyPZWjXoJUsXuWqstb473KR+Sf9XHbjIdfJ8=";
   };
 
   build-system = [
@@ -48,7 +48,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python object API for managing the Linux LIO kernel target";
     homepage = "https://github.com/open-iscsi/rtslib-fb";
-    changelog = "https://github.com/open-iscsi/rtslib-fb/releases/tag/v${version}";
+    changelog = "https://github.com/open-iscsi/rtslib-fb/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     platforms = lib.platforms.linux;
     mainProgram = "targetctl";
diff --git a/pkgs/development/python-modules/ruamel-yaml/default.nix b/pkgs/development/python-modules/ruamel-yaml/default.nix
index 9d1aee84809d..4096a930e5bf 100644
--- a/pkgs/development/python-modules/ruamel-yaml/default.nix
+++ b/pkgs/development/python-modules/ruamel-yaml/default.nix
@@ -10,13 +10,13 @@
 
 buildPythonPackage rec {
   pname = "ruamel-yaml";
-  version = "0.18.10";
+  version = "0.18.14";
   pyproject = true;
 
   src = fetchPypi {
     pname = "ruamel.yaml";
     inherit version;
-    hash = "sha256-IMhqsprCFT+ApCjhJUqK32htM4PfBEkFFMo7eaNi21g=";
+    hash = "sha256-cie3aq7DZN8Vk2cw7799crMMC3mx1Xi7uOPcstgfUrc=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/rubicon-objc/default.nix b/pkgs/development/python-modules/rubicon-objc/default.nix
index 83fe9636748c..cab1a5684b8d 100644
--- a/pkgs/development/python-modules/rubicon-objc/default.nix
+++ b/pkgs/development/python-modules/rubicon-objc/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "rubicon-objc";
-  version = "0.5.0";
+  version = "0.5.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "beeware";
     repo = "rubicon-objc";
     tag = "v${version}";
-    hash = "sha256-yEsW8xHW004O7aDU4/mlbfTuF2H5UcpbNR9NACxQv3M=";
+    hash = "sha256-HnPp7VUrcTfkl5XdXYasydMqxhp7eb7r5RW/7yRWmko=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/rucio/default.nix b/pkgs/development/python-modules/rucio/default.nix
index 15ffb3309b94..7e43bc92ac3d 100644
--- a/pkgs/development/python-modules/rucio/default.nix
+++ b/pkgs/development/python-modules/rucio/default.nix
@@ -37,14 +37,14 @@
 
 buildPythonPackage rec {
   pname = "rucio";
-  version = "32.8.6";
+  version = "37.7.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "rucio";
     repo = "rucio";
     tag = version;
-    hash = "sha256-VQQ4gy9occism1WDrlcHnB7b7D5/G68wKct2PhD59FA=";
+    hash = "sha256-PZ6g/ILs1ed+lxcH2GyV1YJyJqLgYb5/xQ31OXiXnBU=";
   };
 
   pythonRelaxDeps = [
@@ -107,7 +107,7 @@ buildPythonPackage rec {
   meta = {
     description = "Tool for Scientific Data Management";
     homepage = "http://rucio.cern.ch/";
-    changelog = "https://github.com/rucio/rucio/releases/tag/${version}";
+    changelog = "https://github.com/rucio/rucio/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ veprbl ];
   };
diff --git a/pkgs/development/python-modules/s3fs/default.nix b/pkgs/development/python-modules/s3fs/default.nix
index 47ea05d11f2b..a8ac2afdb16c 100644
--- a/pkgs/development/python-modules/s3fs/default.nix
+++ b/pkgs/development/python-modules/s3fs/default.nix
@@ -15,6 +15,7 @@
   flask,
   flask-cors,
   moto,
+  pytest-asyncio,
   pytestCheckHook,
 }:
 
@@ -53,6 +54,7 @@ buildPythonPackage rec {
     flask
     flask-cors
     moto
+    pytest-asyncio
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/s3transfer/default.nix b/pkgs/development/python-modules/s3transfer/default.nix
index cb6206734643..5ee2504ae640 100644
--- a/pkgs/development/python-modules/s3transfer/default.nix
+++ b/pkgs/development/python-modules/s3transfer/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "s3transfer";
-  version = "0.13.0";
+  version = "0.13.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "boto";
     repo = "s3transfer";
     tag = version;
-    hash = "sha256-Ou3U7IPGJdK9exOLMgPFoTbOQi9IA+ivoGVOygB4ACE=";
+    hash = "sha256-NDm1Lc0PXW1hbNftwdM2b87wFXSCBPCxZmwcRFmIyY8=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/safety/default.nix b/pkgs/development/python-modules/safety/default.nix
index 020178ff3c14..2a7bb2ada2e8 100644
--- a/pkgs/development/python-modules/safety/default.nix
+++ b/pkgs/development/python-modules/safety/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "safety";
-  version = "3.5.2";
+  version = "3.6.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pyupio";
     repo = "safety";
     tag = version;
-    hash = "sha256-kYGoJpFkZo4kZmbmak/+nOS2gzDO/xAwfbcGPOFxyrY=";
+    hash = "sha256-YJUehO91TJ7mGaB1hEgZSF0ds3SlZ01Z59RcR/B56tI=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/sagemaker/default.nix b/pkgs/development/python-modules/sagemaker/default.nix
index 387c831757e4..fa226744b5c0 100644
--- a/pkgs/development/python-modules/sagemaker/default.nix
+++ b/pkgs/development/python-modules/sagemaker/default.nix
@@ -40,14 +40,14 @@
 
 buildPythonPackage rec {
   pname = "sagemaker";
-  version = "2.244.0";
+  version = "2.249.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "aws";
     repo = "sagemaker-python-sdk";
     tag = "v${version}";
-    hash = "sha256-T4E1zoZBDUbvnpndhUGYeIG845i5SvpOeYI3VSThUeU=";
+    hash = "sha256-CXEIRFr0rrdydPOKp4HxErUUew86toGAkKo8X5Bz2Bo=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/sanic/default.nix b/pkgs/development/python-modules/sanic/default.nix
index 10fed42b4bda..94ce7ab55218 100644
--- a/pkgs/development/python-modules/sanic/default.nix
+++ b/pkgs/development/python-modules/sanic/default.nix
@@ -91,6 +91,8 @@ buildPythonPackage rec {
     "test_input_is_dir"
     # Racy, e.g. Address already in use
     "test_logger_vhosts"
+    # Event loop is closed
+    "test_create_server_trigger_events"
   ];
 
   disabledTestPaths = [
@@ -100,6 +102,8 @@ buildPythonPackage rec {
     "typing/test_typing.py"
     # occasionally hangs
     "test_multiprocessing.py"
+    # Failed: async def functions are not natively supported.
+    "test_touchup.py"
   ];
 
   # Avoid usage of nixpkgs-review in darwin since tests will compete usage
diff --git a/pkgs/development/python-modules/sasmodels/default.nix b/pkgs/development/python-modules/sasmodels/default.nix
index 15bed29c2ea7..73a4b92b4092 100644
--- a/pkgs/development/python-modules/sasmodels/default.nix
+++ b/pkgs/development/python-modules/sasmodels/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "sasmodels";
-  version = "1.0.9";
+  version = "1.0.10";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "SasView";
     repo = "sasmodels";
     tag = "v${version}";
-    hash = "sha256-eD0YTQYR64tKwG7VxmQkHV2ZACs24hx/sS4me7qTcu4=";
+    hash = "sha256-cTXFlTCm521+xhcggFvDqVZrTJuDiVZ8PazBwA3mKJU=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/schema-salad/default.nix b/pkgs/development/python-modules/schema-salad/default.nix
index 144dc0cc6995..872f8073f0ca 100644
--- a/pkgs/development/python-modules/schema-salad/default.nix
+++ b/pkgs/development/python-modules/schema-salad/default.nix
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "schema-salad";
-  version = "8.9.20250408123006";
+  version = "8.9.20250723145140";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     owner = "common-workflow-language";
     repo = "schema_salad";
     tag = version;
-    hash = "sha256-sPPHz43zvqdQ3eruRlVxLLP1ZU/UoVdtDhtQRAo8vNg=";
+    hash = "sha256-FEdv0VORkvXhqXPrmyCZ1Ib5Lz4fKwRkEqEcEXpfGq8=";
   };
 
   pythonRelaxDeps = [ "mistune" ];
diff --git a/pkgs/development/python-modules/scikit-bio/default.nix b/pkgs/development/python-modules/scikit-bio/default.nix
index 3da89a537923..347c9364e41b 100644
--- a/pkgs/development/python-modules/scikit-bio/default.nix
+++ b/pkgs/development/python-modules/scikit-bio/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "scikit-bio";
-  version = "0.6.3";
+  version = "0.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scikit-bio";
     repo = "scikit-bio";
     tag = version;
-    hash = "sha256-yZa9Kl7+Rk4FLQkZIxa9UIsIGAo6YI4UAiJYbhhPIaI=";
+    hash = "sha256-M0P5DUAMlRTkaIPbxSvO99N3y5eTrkg4NMlkIpGr4/g=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/scikit-build-core/default.nix b/pkgs/development/python-modules/scikit-build-core/default.nix
index ebca328cc73a..d4f73945c8be 100644
--- a/pkgs/development/python-modules/scikit-build-core/default.nix
+++ b/pkgs/development/python-modules/scikit-build-core/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "scikit-build-core";
-  version = "0.11.3";
+  version = "0.11.5";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scikit-build";
     repo = "scikit-build-core";
-    rev = "refs/tags/v${version}";
-    hash = "sha256-RtRk0g0ZREFPjm2i2uTqV3UfKZ/aDHUGyju3SI8vs0Y=";
+    tag = "v${version}";
+    hash = "sha256-4DwODJw1U/0+K/d7znYtDO2va71lzp1gDm4Bg9OBjQY=";
   };
 
   postPatch = lib.optionalString (pythonOlder "3.11") ''
@@ -91,7 +91,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Next generation Python CMake adaptor and Python API for plugins";
     homepage = "https://github.com/scikit-build/scikit-build-core";
-    changelog = "https://github.com/scikit-build/scikit-build-core/blob/${src.rev}/docs/about/changelog.md";
+    changelog = "https://github.com/scikit-build/scikit-build-core/blob/${src.tag}/docs/about/changelog.md";
     license = with licenses; [ asl20 ];
     maintainers = with maintainers; [ veprbl ];
   };
diff --git a/pkgs/development/python-modules/scikit-learn/default.nix b/pkgs/development/python-modules/scikit-learn/default.nix
index b264eabd5ec1..9ebbffd136c2 100644
--- a/pkgs/development/python-modules/scikit-learn/default.nix
+++ b/pkgs/development/python-modules/scikit-learn/default.nix
@@ -26,7 +26,7 @@ buildPythonPackage rec {
   __structuredAttrs = true;
 
   pname = "scikit-learn";
-  version = "1.6.1";
+  version = "1.7.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -34,13 +34,16 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "scikit_learn";
     inherit version;
-    hash = "sha256-tPwlJeyixppZJg9YPFanVXxszfjer9um4GD5TBxZc44=";
+    hash = "sha256-JLPx6XakZlqnTuD8qsK4/Mxq53yOB6sl2jum0ykrmAI=";
   };
 
   postPatch = ''
     substituteInPlace meson.build --replace-fail \
       "run_command('sklearn/_build_utils/version.py', check: true).stdout().strip()," \
       "'${version}',"
+    substituteInPlace pyproject.toml \
+      --replace-fail "numpy>=2,<2.3.0" numpy \
+      --replace-fail "scipy>=1.8.0,<1.16.0" scipy
   '';
 
   buildInputs = [
@@ -68,6 +71,11 @@ buildPythonPackage rec {
     threadpoolctl
   ];
 
+  pythonRelaxDeps = [
+    "numpy"
+    "scipy"
+  ];
+
   nativeCheckInputs = [
     pytestCheckHook
     pytest-xdist
diff --git a/pkgs/development/python-modules/scikit-rf/default.nix b/pkgs/development/python-modules/scikit-rf/default.nix
index 7948fe945b72..ffb55f28ca28 100644
--- a/pkgs/development/python-modules/scikit-rf/default.nix
+++ b/pkgs/development/python-modules/scikit-rf/default.nix
@@ -27,7 +27,7 @@
 
 buildPythonPackage rec {
   pname = "scikit-rf";
-  version = "1.7.0";
+  version = "1.8.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -36,7 +36,7 @@ buildPythonPackage rec {
     owner = "scikit-rf";
     repo = "scikit-rf";
     tag = "v${version}";
-    hash = "sha256-Ovrr1U7VuuGKDNSBSCyYSz3DNpaJrA57ccl4AFdzC5E=";
+    hash = "sha256-wQOphwG5/4Bfa+re3S0d7lS4CJlKRjrRqnFZKaTG70M=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/scim2-client/default.nix b/pkgs/development/python-modules/scim2-client/default.nix
index 388c21af3852..8748ccf4e62b 100644
--- a/pkgs/development/python-modules/scim2-client/default.nix
+++ b/pkgs/development/python-modules/scim2-client/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "scim2-client";
-  version = "0.5.2";
+  version = "0.6.1";
 
   pyproject = true;
 
@@ -26,7 +26,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "scim2_client";
-    hash = "sha256-viIriAFyfJVrJRr04GBD3dhaQ+iUVujigsx1ucSSeqA=";
+    hash = "sha256-5XOUOKf0vYHkewY22x5NQdhICXCd+EftKhsxtQurgHQ=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/scim2-models/default.nix b/pkgs/development/python-modules/scim2-models/default.nix
index a3e2681e7ad9..2ea8a47a578a 100644
--- a/pkgs/development/python-modules/scim2-models/default.nix
+++ b/pkgs/development/python-modules/scim2-models/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "scim2-models";
-  version = "0.3.5";
+  version = "0.4.1";
 
   pyproject = true;
 
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "scim2_models";
-    hash = "sha256-nOLCYyyB7Si+KfwdWM7DCkDoaVEj/coUA//ZW3hKHuA=";
+    hash = "sha256-SRUPO67otfZsrdjGQyTul5vIrYRU2WFaL0fvAtVd/1c=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/scim2-server/default.nix b/pkgs/development/python-modules/scim2-server/default.nix
index fa844171be8b..3f5ea98884eb 100644
--- a/pkgs/development/python-modules/scim2-server/default.nix
+++ b/pkgs/development/python-modules/scim2-server/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "scim2-server";
-  version = "0.1.5";
+  version = "0.1.7";
 
   pyproject = true;
 
   src = fetchPypi {
     inherit version;
     pname = "scim2_server";
-    hash = "sha256-VCJVLnYg3+Kz7/DXWnZXkFqXVszsd2hm3cLY22J4NRw=";
+    hash = "sha256-nMS6vjMZ/Lyu0kiVH+IlmxZsuu7McY7AZS/xamfZSlk=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/scipy-stubs/default.nix b/pkgs/development/python-modules/scipy-stubs/default.nix
index ce38381ca3ef..984c29e674e4 100644
--- a/pkgs/development/python-modules/scipy-stubs/default.nix
+++ b/pkgs/development/python-modules/scipy-stubs/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "scipy-stubs";
-  version = "1.16.0.2";
+  version = "1.16.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "scipy";
     repo = "scipy-stubs";
     tag = "v${version}";
-    hash = "sha256-xaBii3vONwfHlrsLr+uvXvirZ2WT1OgUzlYxRIRnGdI=";
+    hash = "sha256-KRwFQG1Nb+Kh9OpQCGtvUzQA0MHNEZnRlzSkpZCNxuw=";
   };
 
   disabled = pythonOlder "3.11";
diff --git a/pkgs/development/python-modules/scipy/default.nix b/pkgs/development/python-modules/scipy/default.nix
index c03bc058262f..92151e468259 100644
--- a/pkgs/development/python-modules/scipy/default.nix
+++ b/pkgs/development/python-modules/scipy/default.nix
@@ -50,8 +50,8 @@ let
   #     nix-shell maintainers/scripts/update.nix --argstr package python3.pkgs.scipy
   #
   # The update script uses sed regexes to replace them with the updated hashes.
-  version = "1.16.0";
-  srcHash = "sha256-PFWUq7RsqMgBK1bTw52y1renoPygWNreikNTFHWE2Ig=";
+  version = "1.16.1";
+  srcHash = "sha256-/LgYQUMGoQjSWMCWBgnekNGzEc0LVg2qiN2tV399rQU=";
   datasetsHashes = {
     ascent = "1qjp35ncrniq9rhzb14icwwykqg2208hcssznn3hz27w39615kh3";
     ecg = "1bwbjp43b7znnwha5hv6wiz3g0bhwrpqpi75s12zidxrbwvd62pj";
diff --git a/pkgs/development/python-modules/scmrepo/default.nix b/pkgs/development/python-modules/scmrepo/default.nix
index 012ddd088a50..c6bfc4ec364f 100644
--- a/pkgs/development/python-modules/scmrepo/default.nix
+++ b/pkgs/development/python-modules/scmrepo/default.nix
@@ -19,7 +19,7 @@
 
 buildPythonPackage rec {
   pname = "scmrepo";
-  version = "3.3.11";
+  version = "3.5.1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -28,7 +28,7 @@ buildPythonPackage rec {
     owner = "iterative";
     repo = "scmrepo";
     tag = version;
-    hash = "sha256-0vgpfUeqhol3AZuUotSbGYVyknVSxRLBwVMkcKx3m48=";
+    hash = "sha256-pAORKgS6IivDjx5sms/9XYZKQ3+hRuRvsEFGkfKj0ME=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/scooby/default.nix b/pkgs/development/python-modules/scooby/default.nix
index 12bbb889ffd9..97a5eb288770 100644
--- a/pkgs/development/python-modules/scooby/default.nix
+++ b/pkgs/development/python-modules/scooby/default.nix
@@ -3,7 +3,9 @@
   beautifulsoup4,
   buildPythonPackage,
   fetchFromGitHub,
+  iniconfig,
   numpy,
+  psutil,
   pytest-console-scripts,
   pytestCheckHook,
   pythonOlder,
@@ -28,8 +30,16 @@ buildPythonPackage rec {
 
   build-system = [ setuptools-scm ];
 
+  optional-dependencies = {
+    cpu = [
+      psutil
+      # mkl
+    ];
+  };
+
   nativeCheckInputs = [
     beautifulsoup4
+    iniconfig
     numpy
     pytest-console-scripts
     pytestCheckHook
@@ -51,6 +61,8 @@ buildPythonPackage rec {
     "test_import_time"
     # TypeError: expected str, bytes or os.PathLike object, not list
     "test_cli"
+    # Fails to find iniconfig in environment
+    "test_auto_report"
   ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/segyio/default.nix b/pkgs/development/python-modules/segyio/default.nix
index 005a194afd6d..1346623c9807 100644
--- a/pkgs/development/python-modules/segyio/default.nix
+++ b/pkgs/development/python-modules/segyio/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "segyio";
-  version = "1.9.12";
+  version = "1.9.13";
   pyproject = false; # Built with cmake
 
   patches = [
@@ -37,7 +37,7 @@ buildPythonPackage rec {
     owner = "equinor";
     repo = "segyio";
     tag = "v${version}";
-    hash = "sha256-+N2JvHBxpdbysn4noY/9LZ4npoQ9143iFEzaxoafnms=";
+    hash = "sha256-uVQ5cs9EPGUTSbaclLjFDwnbJevtv6ie94FLi+9vd94=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/sensor-state-data/default.nix b/pkgs/development/python-modules/sensor-state-data/default.nix
index fd414913be3e..12a40c0af256 100644
--- a/pkgs/development/python-modules/sensor-state-data/default.nix
+++ b/pkgs/development/python-modules/sensor-state-data/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "sensor-state-data";
-  version = "2.18.1";
+  version = "2.19.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.9";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "Bluetooth-Devices";
     repo = "sensor-state-data";
     tag = "v${version}";
-    hash = "sha256-9GdBKUhueis8pnQP5ZNxvEyRXVGINTueVzLOR4xx5mU=";
+    hash = "sha256-Jl+kyr9WhYEzvsnSdqfeDDWgcEU9Yi6Snd67YQ+1MqQ=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -34,7 +34,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Models for storing and converting Sensor Data state";
     homepage = "https://github.com/bluetooth-devices/sensor-state-data";
-    changelog = "https://github.com/Bluetooth-Devices/sensor-state-data/releases/tag/v${version}";
+    changelog = "https://github.com/Bluetooth-Devices/sensor-state-data/releases/tag/${src.tag}";
     license = with licenses; [ asl20 ];
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/sentry-sdk/default.nix b/pkgs/development/python-modules/sentry-sdk/default.nix
index 076a82996763..c23fc3a688a4 100644
--- a/pkgs/development/python-modules/sentry-sdk/default.nix
+++ b/pkgs/development/python-modules/sentry-sdk/default.nix
@@ -67,14 +67,14 @@
 
 buildPythonPackage rec {
   pname = "sentry-sdk";
-  version = "2.25.0";
+  version = "2.34.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "getsentry";
     repo = "sentry-python";
     tag = version;
-    hash = "sha256-HQxZczpfTURbkLaWjOqnYB86UuFHD71kE7HPPjlkUqc=";
+    hash = "sha256-RQnjvX3bDiB9csn/DsQ769EiVm7HY+B7x9V5jpvsOOA=";
   };
 
   postPatch = ''
@@ -214,6 +214,7 @@ buildPythonPackage rec {
     "test_http_timeout"
     # KeyError: 'sentry.release'
     "test_logs_attributes"
+    "test_logger_with_all_attributes"
   ];
 
   pythonImportsCheck = [ "sentry_sdk" ];
@@ -221,7 +222,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Official Python SDK for Sentry.io";
     homepage = "https://github.com/getsentry/sentry-python";
-    changelog = "https://github.com/getsentry/sentry-python/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/getsentry/sentry-python/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ hexa ];
   };
diff --git a/pkgs/development/python-modules/setuptools-scm/default.nix b/pkgs/development/python-modules/setuptools-scm/default.nix
index e8eb947c1830..a576af2ce364 100644
--- a/pkgs/development/python-modules/setuptools-scm/default.nix
+++ b/pkgs/development/python-modules/setuptools-scm/default.nix
@@ -19,13 +19,13 @@
 
 buildPythonPackage rec {
   pname = "setuptools-scm";
-  version = "8.3.1";
+  version = "9.0.1";
   pyproject = true;
 
   src = fetchPypi {
     pname = "setuptools_scm";
     inherit version;
-    hash = "sha256-PVVekrddrNA30yuv35T5evUeoprox7I0z5S3pb0kKmM=";
+    hash = "sha256-RuHPfooJZSthP5uk/ptV8vSW56Iz5OANJafLQflMPAs=";
   };
 
   postPatch =
diff --git a/pkgs/development/python-modules/setuptools/default.nix b/pkgs/development/python-modules/setuptools/default.nix
index 6590a4d126d7..03156d16334c 100644
--- a/pkgs/development/python-modules/setuptools/default.nix
+++ b/pkgs/development/python-modules/setuptools/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "setuptools";
-  version = "80.7.1";
+  version = "80.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pypa";
     repo = "setuptools";
     tag = "v${version}";
-    hash = "sha256-lOGvJoVwFxASI7e5fJkeS7iGOIPklGRYmmMfclqn0H4=";
+    hash = "sha256-wueVQsV0ja/iPFRK7OKV27FQ7hYKF8cP3WH5wJeIXnI=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/shap/default.nix b/pkgs/development/python-modules/shap/default.nix
index 3c4a217fb2b3..498899a7e78f 100644
--- a/pkgs/development/python-modules/shap/default.nix
+++ b/pkgs/development/python-modules/shap/default.nix
@@ -7,6 +7,7 @@
   writeText,
   catboost,
   cloudpickle,
+  cython,
   ipython,
   lightgbm,
   lime,
@@ -30,7 +31,7 @@
 
 buildPythonPackage rec {
   pname = "shap";
-  version = "0.46.0";
+  version = "0.48.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -39,15 +40,17 @@ buildPythonPackage rec {
     owner = "slundberg";
     repo = "shap";
     tag = "v${version}";
-    hash = "sha256-qW36/Xw5oaYKmaMfE5euzkED9CKkjl2O55aO0OpCkfI=";
+    hash = "sha256-eWZhyrFpEFlmTFPTHZng9V+uMRMXDVzFdgrqIzRQTws=";
   };
 
   postPatch = ''
     substituteInPlace pyproject.toml \
+      --replace-fail "cython>=3.0.11" cython \
       --replace-fail "numpy>=2.0" "numpy"
   '';
 
   build-system = [
+    cython
     numpy
     setuptools
     setuptools-scm
@@ -147,7 +150,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Unified approach to explain the output of any machine learning model";
     homepage = "https://github.com/slundberg/shap";
-    changelog = "https://github.com/slundberg/shap/releases/tag/v${version}";
+    changelog = "https://github.com/slundberg/shap/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [
       evax
diff --git a/pkgs/development/python-modules/shapely/default.nix b/pkgs/development/python-modules/shapely/default.nix
index 3e204277afbe..ccad45bbac48 100644
--- a/pkgs/development/python-modules/shapely/default.nix
+++ b/pkgs/development/python-modules/shapely/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "shapely";
-  version = "2.1.0";
+  version = "2.1.1";
   pyproject = true;
   disabled = pythonOlder "3.7";
 
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "shapely";
     repo = "shapely";
     tag = version;
-    hash = "sha256-Co3acjWsGWjwzMoklRx2CqBDOlEpaj3wWenLWxopvKY=";
+    hash = "sha256-qIITlPym92wfq0byqjRxofpmYYg7vohbi1qPVEu6hRg=";
   };
 
   nativeBuildInputs = [
@@ -61,7 +61,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "shapely" ];
 
   meta = {
-    changelog = "https://github.com/shapely/shapely/blob/${version}/CHANGES.txt";
+    changelog = "https://github.com/shapely/shapely/blob/${src.tag}/CHANGES.txt";
     description = "Manipulation and analysis of geometric objects";
     homepage = "https://github.com/shapely/shapely";
     license = lib.licenses.bsd3;
diff --git a/pkgs/development/python-modules/shazamio/default.nix b/pkgs/development/python-modules/shazamio/default.nix
index eec2b5bdcc73..d46ea0258aa1 100644
--- a/pkgs/development/python-modules/shazamio/default.nix
+++ b/pkgs/development/python-modules/shazamio/default.nix
@@ -18,14 +18,14 @@
 
 buildPythonPackage rec {
   pname = "shazamio";
-  version = "0.7.0";
+  version = "0.8.1";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "dotX12";
     repo = "ShazamIO";
     tag = version;
-    hash = "sha256-72bZyEKvCt/MSqQKzEMQZUC3z53rGm0LJCv6oBCQEYE=";
+    hash = "sha256-beEEr9Y8w0XlC/0+mNL/oWscmnfwt9KChlZ7Ullyk3E=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/shtab/default.nix b/pkgs/development/python-modules/shtab/default.nix
index f89577c49a5a..9d78fa5d95b2 100644
--- a/pkgs/development/python-modules/shtab/default.nix
+++ b/pkgs/development/python-modules/shtab/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "shtab";
-  version = "1.7.1";
+  version = "1.7.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "iterative";
     repo = "shtab";
     tag = "v${version}";
-    hash = "sha256-8bAwLSdJCzFw5Vf9CKBrH5zOoojeXds7aIRncl+sLBI=";
+    hash = "sha256-ngTAST+6lBek0PHvULmlJZAHVU49YN5+XAu5KEk6cIM=";
   };
 
   nativeBuildInputs = [
@@ -43,7 +43,7 @@ buildPythonPackage rec {
     description = "Module for shell tab completion of Python CLI applications";
     mainProgram = "shtab";
     homepage = "https://docs.iterative.ai/shtab/";
-    changelog = "https://github.com/iterative/shtab/releases/tag/v${version}";
+    changelog = "https://github.com/iterative/shtab/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/simplesat/default.nix b/pkgs/development/python-modules/simplesat/default.nix
index 391701e6ca24..d325847f9ab0 100644
--- a/pkgs/development/python-modules/simplesat/default.nix
+++ b/pkgs/development/python-modules/simplesat/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "simplesat";
-  version = "0.9.1";
+  version = "0.9.2";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "enthought";
     repo = "sat-solver";
     tag = "v${version}";
-    hash = "sha256-/fBnpf1DtaF+wQYZztcB8Y20/ZMYxrF3fH5qRsMucL0=";
+    hash = "sha256-C3AQN999iuckaY9I0RTI8Uj6hrV4UB1XYvua5VG8hHw=";
   };
 
   postPatch = ''
@@ -57,7 +57,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Prototype for SAT-based dependency handling";
     homepage = "https://github.com/enthought/sat-solver";
-    changelog = "https://github.com/enthought/sat-solver/blob/v${version}/CHANGES.rst";
+    changelog = "https://github.com/enthought/sat-solver/blob/${src.tag}/CHANGES.rst";
     license = licenses.bsd3;
     maintainers = with maintainers; [ genericnerdyusername ];
   };
diff --git a/pkgs/development/python-modules/sip/default.nix b/pkgs/development/python-modules/sip/default.nix
index 067560caee50..c5059665cd78 100644
--- a/pkgs/development/python-modules/sip/default.nix
+++ b/pkgs/development/python-modules/sip/default.nix
@@ -16,19 +16,14 @@
 
 buildPythonPackage rec {
   pname = "sip";
-  version = "6.10.0";
+  version = "6.12.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-+gUVaX1MmNvgTZ6JjYFt4UJ+W5rl0OFSFpEJ/SH10pw=";
+    hash = "sha256-CDztlPhTFUkyMRGaY5cLK6QrHTizjnMKcOAqmRkaicY=";
   };
 
-  patches = [
-    # Make wheel file generation deterministic https://github.com/NixOS/nixpkgs/issues/383885
-    ./sip-builder.patch
-  ];
-
   build-system = [
     setuptools
     setuptools-scm
diff --git a/pkgs/development/python-modules/sip/sip-builder.patch b/pkgs/development/python-modules/sip/sip-builder.patch
deleted file mode 100644
index 2a7e1a5753d7..000000000000
--- a/pkgs/development/python-modules/sip/sip-builder.patch
+++ /dev/null
@@ -1,28 +0,0 @@
---- a/sipbuild/builder.py	2025-04-21 12:19:34
-+++ b/sipbuild/builder.py	2025-04-21 12:27:09
-@@ -177,16 +177,23 @@
-         saved_cwd = os.getcwd()
-         os.chdir(wheel_build_dir)
- 
--        from zipfile import ZipFile, ZIP_DEFLATED
-+        from zipfile import ZipFile, ZipInfo, ZIP_DEFLATED
-+        import time
- 
-+        epoch = int(os.environ.get('SOURCE_DATE_EPOCH', '946684800'))
-+        zip_timestamp = time.gmtime(epoch)[:6]
-+
-         with ZipFile(wheel_path, 'w', compression=ZIP_DEFLATED) as zf:
-             for dirpath, _, filenames in os.walk('.'):
-                 for filename in filenames:
-                     # This will result in a name with no leading '.'.
-                     name = os.path.relpath(os.path.join(dirpath, filename))
- 
--                    zf.write(name)
-+                    zi = ZipInfo(name, zip_timestamp)
- 
-+                    with open(name, 'rb') as f:
-+                        zf.writestr(zi, f.read())
-+
-         os.chdir(saved_cwd)
- 
-         return wheel_file
diff --git a/pkgs/development/python-modules/sismic/default.nix b/pkgs/development/python-modules/sismic/default.nix
index 1d61ad2689c9..c4b177050df0 100644
--- a/pkgs/development/python-modules/sismic/default.nix
+++ b/pkgs/development/python-modules/sismic/default.nix
@@ -11,9 +11,9 @@
 }:
 
 let
-  version = "1.6.8";
+  version = "1.6.10";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "sismic";
   inherit version;
   pyproject = true;
@@ -24,7 +24,7 @@ buildPythonPackage {
     owner = "AlexandreDecan";
     repo = "sismic";
     tag = version;
-    hash = "sha256-0g39jJI3UIniJY/oHQMZ53GCOJIbqdVeOED9PWxlw6E=";
+    hash = "sha256-FUjOn2b4nhHf2DfYbY+wsRMaVEG90nPgLlNbNTiq3fQ=";
   };
 
   pythonRelaxDeps = [ "behave" ];
@@ -50,7 +50,7 @@ buildPythonPackage {
   ];
 
   meta = {
-    changelog = "https://github.com/AlexandreDecan/sismic/releases/tag/${version}";
+    changelog = "https://github.com/AlexandreDecan/sismic/releases/tag/${src.tag}";
     description = "Sismic Interactive Statechart Model Interpreter and Checker";
     homepage = "https://github.com/AlexandreDecan/sismic";
     license = lib.licenses.lgpl3Only;
diff --git a/pkgs/development/python-modules/skops/default.nix b/pkgs/development/python-modules/skops/default.nix
index 2f911749e5f4..4356e4fe4983 100644
--- a/pkgs/development/python-modules/skops/default.nix
+++ b/pkgs/development/python-modules/skops/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "skops";
-  version = "0.11.0";
+  version = "0.12.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "skops-dev";
     repo = "skops";
     tag = "v${version}";
-    hash = "sha256-23Wy/VSd/CvpqT/zDX4ApplfsUwbjOj9q+T8YCKs8X4=";
+    hash = "sha256-OLRnaG++5Z7Y0WZnvfdPn6iIXzum5FTL0+geiO5QjYs=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/slapd/default.nix b/pkgs/development/python-modules/slapd/default.nix
index 2e466bec45af..789ecbb24e58 100644
--- a/pkgs/development/python-modules/slapd/default.nix
+++ b/pkgs/development/python-modules/slapd/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "slapd";
-  version = "0.1.5";
+  version = "0.1.6";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "python-ldap";
     repo = "python-slapd";
     tag = version;
-    hash = "sha256-AiJvhgJ62vCj75m6l5kuIEb7k2qCh/QJybS0uqw2vBY=";
+    hash = "sha256-xXIKC8xDJ3Q6yV1BL5Io0PkLqVbFRbbkB0QSXQGHMNg=";
   };
 
   build-system = [ poetry-core ];
@@ -40,7 +40,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Controls a slapd process in a pythonic way";
     homepage = "https://github.com/python-ldap/python-slapd";
-    changelog = "https://github.com/python-ldap/python-slapd/blob/${src.rev}/CHANGES.rst";
+    changelog = "https://github.com/python-ldap/python-slapd/blob/${src.tag}/CHANGES.rst";
     license = licenses.mit;
     maintainers = with maintainers; [ erictapen ];
   };
diff --git a/pkgs/development/python-modules/smart-open/default.nix b/pkgs/development/python-modules/smart-open/default.nix
index 1f078d327c75..4c25a8091069 100644
--- a/pkgs/development/python-modules/smart-open/default.nix
+++ b/pkgs/development/python-modules/smart-open/default.nix
@@ -3,6 +3,7 @@
   buildPythonPackage,
   pythonOlder,
   fetchFromGitHub,
+  awscli,
   azure-common,
   azure-core,
   azure-storage-blob,
@@ -10,17 +11,21 @@
   google-cloud-storage,
   requests,
   moto,
+  numpy,
   paramiko,
+  pytest-cov-stub,
   pytestCheckHook,
+  pyopenssl,
   responses,
   setuptools,
+  setuptools-scm,
   wrapt,
   zstandard,
 }:
 
 buildPythonPackage rec {
   pname = "smart-open";
-  version = "7.2.0";
+  version = "7.3.0.post1";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -29,10 +34,13 @@ buildPythonPackage rec {
     owner = "RaRe-Technologies";
     repo = "smart_open";
     tag = "v${version}";
-    hash = "sha256-/16Is90235scTAYUW/65QxcTddD0+aiG5TLzYsBUE1A=";
+    hash = "sha256-79q1uQML7WMHsaKQ7+4JA6LpeysJRA4fFxYVqQFntag=";
   };
 
-  build-system = [ setuptools ];
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
 
   dependencies = [ wrapt ];
 
@@ -53,13 +61,18 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "smart_open" ];
 
   nativeCheckInputs = [
+    awscli
     moto
+    numpy
+    pytest-cov-stub
     pytestCheckHook
+    pyopenssl
     responses
   ]
+  ++ moto.optional-dependencies.server
   ++ lib.flatten (lib.attrValues optional-dependencies);
 
-  enabledTestPaths = [ "smart_open" ];
+  enabledTestPaths = [ "tests" ];
 
   disabledTests = [
     # https://github.com/RaRe-Technologies/smart_open/issues/784
@@ -72,7 +85,7 @@ buildPythonPackage rec {
   meta = with lib; {
     changelog = "https://github.com/piskvorky/smart_open/releases/tag/${src.tag}";
     description = "Library for efficient streaming of very large file";
-    homepage = "https://github.com/RaRe-Technologies/smart_open";
+    homepage = "https://github.com/piskvorky/smart_open";
     license = licenses.mit;
   };
 }
diff --git a/pkgs/development/python-modules/snitun/default.nix b/pkgs/development/python-modules/snitun/default.nix
index 3f95f9cd081b..b17c173e0144 100644
--- a/pkgs/development/python-modules/snitun/default.nix
+++ b/pkgs/development/python-modules/snitun/default.nix
@@ -8,6 +8,7 @@
   cryptography,
   fetchFromGitHub,
   pytest-aiohttp,
+  pytest-codspeed,
   pytestCheckHook,
   pythonAtLeast,
   pythonOlder,
@@ -16,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "snitun";
-  version = "0.40.0";
+  version = "0.44.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -25,9 +26,14 @@ buildPythonPackage rec {
     owner = "NabuCasa";
     repo = "snitun";
     tag = version;
-    hash = "sha256-wit0GVuWFMl1u+VC7Aw+dPcvqLGyviSz/DVUKXvSvAs=";
+    hash = "sha256-jZRA/UKamB5fUSvyaemN0Vq4GX6bNL8rsYCgToEkIL4=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail 'version = "0.0.0"' 'version = "${version}"'
+  '';
+
   build-system = [ setuptools ];
 
   dependencies = [
@@ -39,6 +45,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     pytest-aiohttp
+    pytest-codspeed
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/snowflake-connector-python/default.nix b/pkgs/development/python-modules/snowflake-connector-python/default.nix
index 2bcb2cc5f969..c0f0b7773b8b 100644
--- a/pkgs/development/python-modules/snowflake-connector-python/default.nix
+++ b/pkgs/development/python-modules/snowflake-connector-python/default.nix
@@ -13,6 +13,7 @@
   filelock,
   idna,
   keyring,
+  numpy,
   packaging,
   pandas,
   platformdirs,
@@ -32,7 +33,7 @@
 
 buildPythonPackage rec {
   pname = "snowflake-connector-python";
-  version = "3.15.0";
+  version = "3.16.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -41,7 +42,7 @@ buildPythonPackage rec {
     owner = "snowflakedb";
     repo = "snowflake-connector-python";
     tag = "v${version}";
-    hash = "sha256-Dz5jxmbBfWThmd7H0MIO5+DfnjpDw9ADHg5Sc7P+DYs=";
+    hash = "sha256-mow8TxmkeaMkgPTLUpx5Gucn4347gohHPyiBYjI/cDs=";
   };
 
   build-system = [
@@ -87,6 +88,7 @@ buildPythonPackage rec {
   '';
 
   nativeCheckInputs = [
+    numpy
     pytest-xdist
     pytestCheckHook
   ];
@@ -125,7 +127,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Snowflake Connector for Python";
     homepage = "https://github.com/snowflakedb/snowflake-connector-python";
-    changelog = "https://github.com/snowflakedb/snowflake-connector-python/blob/v${version}/DESCRIPTION.md";
+    changelog = "https://github.com/snowflakedb/snowflake-connector-python/blob/${src.tag}/DESCRIPTION.md";
     license = licenses.asl20;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/snowflake-core/default.nix b/pkgs/development/python-modules/snowflake-core/default.nix
index 09d8a36822a9..98a78511d16f 100644
--- a/pkgs/development/python-modules/snowflake-core/default.nix
+++ b/pkgs/development/python-modules/snowflake-core/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "snowflake-core";
-  version = "1.4.0";
+  version = "1.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "snowflake_core";
     inherit version;
-    hash = "sha256-3BzO3s5BtS/cuF+JwKuAG8Usca5oo79ffp33TXUP5E8=";
+    hash = "sha256-hlWpTCEa4E0dgD28h2JJ3m0/gCHMVzjWia6oQtG2an8=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/snowflake-sqlalchemy/default.nix b/pkgs/development/python-modules/snowflake-sqlalchemy/default.nix
index 3062d7b8758d..9f15789497d2 100644
--- a/pkgs/development/python-modules/snowflake-sqlalchemy/default.nix
+++ b/pkgs/development/python-modules/snowflake-sqlalchemy/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "snowflake-sqlalchemy";
-  version = "1.7.4";
+  version = "1.7.6";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "snowflakedb";
     repo = "snowflake-sqlalchemy";
     tag = "v${version}";
-    hash = "sha256-Twv8ugLrQT9y4wHNo0B8vkWOFNSci/t4eY9XvFlq/TE=";
+    hash = "sha256-8Q4cqfldSilBpj/1/4u5HRUDT8fD9MPzVGcokYt0dJA=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/social-auth-app-django/default.nix b/pkgs/development/python-modules/social-auth-app-django/default.nix
index bec09abd2fe5..a819b8a46831 100644
--- a/pkgs/development/python-modules/social-auth-app-django/default.nix
+++ b/pkgs/development/python-modules/social-auth-app-django/default.nix
@@ -2,40 +2,48 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  social-auth-core,
+  setuptools,
   django,
-  python,
-  pythonOlder,
+  social-auth-core,
+  pytest-django,
+  pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "social-auth-app-django";
-  version = "5.4.2";
-  format = "setuptools";
-
-  disabled = pythonOlder "3.8";
+  version = "5.5.1";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python-social-auth";
     repo = "social-app-django";
     tag = version;
-    hash = "sha256-W9boogixZ7X6qysfh2YEat+TOBy1VNreGr27y8hno+0=";
+    hash = "sha256-XS7Uj0h2kb+NfO/9S5DAwZ+6LSjqeNslLwNbbVZmkTw=";
   };
 
-  propagatedBuildInputs = [ social-auth-core ];
+  build-system = [ setuptools ];
+
+  dependencies = [
+    django
+    social-auth-core
+  ];
 
   pythonImportsCheck = [ "social_django" ];
 
-  nativeCheckInputs = [ django ];
+  nativeCheckInputs = [
+    pytest-django
+    pytestCheckHook
+  ];
 
-  checkPhase = ''
-    ${python.interpreter} -m django test --settings="tests.settings"
+  preCheck = ''
+    export DJANGO_SETTINGS_MODULE=tests.settings
   '';
 
   meta = with lib; {
+    broken = lib.versionOlder django.version "5.1";
     description = "Module for social authentication/registration mechanism";
     homepage = "https://github.com/python-social-auth/social-app-django";
-    changelog = "https://github.com/python-social-auth/social-app-django/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/python-social-auth/social-app-django/blob/${src.tag}/CHANGELOG.md";
     license = licenses.bsd3;
     maintainers = with maintainers; [ ];
   };
diff --git a/pkgs/development/python-modules/social-auth-core/default.nix b/pkgs/development/python-modules/social-auth-core/default.nix
index 860b3981b408..2ea49b464d6e 100644
--- a/pkgs/development/python-modules/social-auth-core/default.nix
+++ b/pkgs/development/python-modules/social-auth-core/default.nix
@@ -8,6 +8,7 @@
   lxml,
   oauthlib,
   pyjwt,
+  pytest-xdist,
   pytestCheckHook,
   python-jose,
   python3-openid,
@@ -15,12 +16,14 @@
   pythonOlder,
   requests,
   requests-oauthlib,
+  responses,
   setuptools,
+  typing-extensions,
 }:
 
 buildPythonPackage rec {
   pname = "social-auth-core";
-  version = "4.5.4";
+  version = "4.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -29,7 +32,7 @@ buildPythonPackage rec {
     owner = "python-social-auth";
     repo = "social-core";
     tag = version;
-    hash = "sha256-tFaRvNoO5K7ytqMhL//Ntasc7jb4PYXB1yyjFvFqQH8=";
+    hash = "sha256-PQPnLTTCAUE1UmaDRmEXLozY0607e2/fLsvzcJzo4bQ=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -54,27 +57,29 @@ buildPythonPackage rec {
   };
 
   nativeCheckInputs = [
+    pytest-xdist
     pytestCheckHook
     httpretty
+    responses
+    typing-extensions
   ]
   ++ lib.flatten (lib.attrValues optional-dependencies);
 
-  # Disable checking the code coverage
-  prePatch = ''
-    substituteInPlace social_core/tests/requirements.txt \
-      --replace "coverage>=3.6" "" \
-      --replace "pytest-cov>=2.7.1" ""
+  disabledTestPaths = [
+    # missing google-auth-stubs
+    "social_core/tests/backends/test_google.py"
 
-    substituteInPlace tox.ini \
-      --replace "{posargs:-v --cov=social_core}" "{posargs:-v}"
-  '';
+    # network access
+    "social_core/tests/backends/test_steam.py::SteamOpenIdMissingSteamIdTest::test_login"
+    "social_core/tests/backends/test_steam.py::SteamOpenIdMissingSteamIdTest::test_partial_pipeline"
+  ];
 
   pythonImportsCheck = [ "social_core" ];
 
   meta = with lib; {
     description = "Module for social authentication/registration mechanisms";
     homepage = "https://github.com/python-social-auth/social-core";
-    changelog = "https://github.com/python-social-auth/social-core/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/python-social-auth/social-core/blob/${src.tag}/CHANGELOG.md";
     license = licenses.bsd3;
     maintainers = with maintainers; [ ];
   };
diff --git a/pkgs/development/python-modules/solc-select/default.nix b/pkgs/development/python-modules/solc-select/default.nix
index 3a9e0f7bb4a9..38525508feb1 100644
--- a/pkgs/development/python-modules/solc-select/default.nix
+++ b/pkgs/development/python-modules/solc-select/default.nix
@@ -1,22 +1,27 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
+  setuptools,
   packaging,
   pycryptodome,
 }:
 
 buildPythonPackage rec {
   pname = "solc-select";
-  version = "1.0.4";
-  format = "setuptools";
+  version = "1.1.0";
+  pyproject = true;
 
-  src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-23ud4AmvbeOlQWuAu+W21ja/MUcDwBYxm4wSMeJIpsc=";
+  src = fetchFromGitHub {
+    owner = "crytic";
+    repo = "solc-select";
+    tag = "v${version}";
+    hash = "sha256-ZB9WM6YTWEqfs5y1DqxbSADiFw997PHIR9uVSjJg1/E=";
   };
 
-  propagatedBuildInputs = [
+  build-system = [ setuptools ];
+
+  dependencies = [
     packaging
     pycryptodome
   ];
diff --git a/pkgs/development/python-modules/sopel/default.nix b/pkgs/development/python-modules/sopel/default.nix
index 0c6298207e68..02da03091cfd 100644
--- a/pkgs/development/python-modules/sopel/default.nix
+++ b/pkgs/development/python-modules/sopel/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "sopel";
-  version = "8.0.2";
+  version = "8.0.3";
   pyproject = true;
 
   disabled = isPyPy || pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-7LNbnSri+yjH2Nw8rBCTO8Lg84VXY6A+xMXscEkUVK8=";
+    hash = "sha256-lhoEgfYaqaZfrfVgyHSwl/algqjnvAc/pnVPwK8YdCc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/sounddevice/default.nix b/pkgs/development/python-modules/sounddevice/default.nix
index 8784657600b9..8481f75272eb 100644
--- a/pkgs/development/python-modules/sounddevice/default.nix
+++ b/pkgs/development/python-modules/sounddevice/default.nix
@@ -13,13 +13,13 @@
 
 buildPythonPackage rec {
   pname = "sounddevice";
-  version = "0.5.1";
+  version = "0.5.2";
   pyproject = true;
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-CcqZHa7ajOS+mskeFamoHI+B76a2laNIyRceoMFssEE=";
+    hash = "sha256-xjTVG9TpItbw+l4al1zIl8lH9h0x2p95un6jTf9Ei0k=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/soxr/default.nix b/pkgs/development/python-modules/soxr/default.nix
index 3470810e5b7e..a090b6d24bd2 100644
--- a/pkgs/development/python-modules/soxr/default.nix
+++ b/pkgs/development/python-modules/soxr/default.nix
@@ -47,7 +47,7 @@ buildPythonPackage rec {
   dontUseCmakeConfigure = true;
 
   pypaBuildFlags = [
-    "--config=cmake.define.USE_SYSTEM_LIBSOXR=ON"
+    "--config-setting=cmake.define.USE_SYSTEM_LIBSOXR=ON"
   ];
 
   build-system = [
diff --git a/pkgs/development/python-modules/sparklines/default.nix b/pkgs/development/python-modules/sparklines/default.nix
index c04f1908def7..afcf086f0cca 100644
--- a/pkgs/development/python-modules/sparklines/default.nix
+++ b/pkgs/development/python-modules/sparklines/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "sparklines";
-  version = "0.5.0";
+  version = "0.7.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "deeplook";
     repo = "sparklines";
     tag = "v${version}";
-    sha256 = "sha256-oit1bDqP96wwfTRCV8V0N9P/+pkdW2WYOWT6u3lb4Xs=";
+    sha256 = "sha256-jiMrxZMWN+moap0bDH+uy66gF4XdGst9HJpnboJrQm4=";
   };
 
   propagatedBuildInputs = [ future ];
diff --git a/pkgs/development/python-modules/sparsezoo/default.nix b/pkgs/development/python-modules/sparsezoo/default.nix
index 9df360195f92..47333d8710fe 100644
--- a/pkgs/development/python-modules/sparsezoo/default.nix
+++ b/pkgs/development/python-modules/sparsezoo/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "sparsezoo";
-  version = "1.8.1";
+  version = "1.9.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "neuralmagic";
     repo = "sparsezoo";
     tag = "v${version}";
-    hash = "sha256-c4F95eVvj673eFO/rbmv4LY3pGmqo+arbsYqElznwdA=";
+    hash = "sha256-eMP/whm06QX5x/RBoYsYwuKxFnpFmqlgh2uDsI3Vaog=";
   };
 
   build-system = [ setuptools ];
@@ -114,7 +114,7 @@ buildPythonPackage rec {
   meta = {
     description = "Neural network model repository for highly sparse and sparse-quantized models with matching sparsification recipes";
     homepage = "https://github.com/neuralmagic/sparsezoo";
-    changelog = "https://github.com/neuralmagic/sparsezoo/releases/tag/v${version}";
+    changelog = "https://github.com/neuralmagic/sparsezoo/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/spatial-image/default.nix b/pkgs/development/python-modules/spatial-image/default.nix
index bd50198af431..fb14578b4610 100644
--- a/pkgs/development/python-modules/spatial-image/default.nix
+++ b/pkgs/development/python-modules/spatial-image/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "spatial-image";
-  version = "1.2.1";
+  version = "1.2.2";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "spatial-image";
     repo = "spatial-image";
     tag = "v${version}";
-    hash = "sha256-PGc2uey2xcfE0PcYDaCp7U0lgeGL1I6MMP3vbTN+Alk=";
+    hash = "sha256-Frvr8uJ3dD2lZFfqrNnki+JUbjhBdRK3BBAtIRtFqvs=";
   };
 
   build-system = [ hatchling ];
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   meta = {
     description = "Multi-dimensional spatial image data structure for scientific Python";
     homepage = "https://github.com/spatial-image/spatial-image";
-    changelog = "https://github.com/spatial-image/spatial-image/releases/tag/v${version}";
+    changelog = "https://github.com/spatial-image/spatial-image/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ bcdarwin ];
   };
diff --git a/pkgs/development/python-modules/sphinx-intl/default.nix b/pkgs/development/python-modules/sphinx-intl/default.nix
index 42b2ff02e0fc..d99b107cc747 100644
--- a/pkgs/development/python-modules/sphinx-intl/default.nix
+++ b/pkgs/development/python-modules/sphinx-intl/default.nix
@@ -13,14 +13,14 @@
 
 buildPythonPackage rec {
   pname = "sphinx-intl";
-  version = "2.3.1";
+  version = "2.3.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "sphinx-doc";
     repo = "sphinx-intl";
     tag = version;
-    hash = "sha256-VrWtRdI9j/y2m7kN7/m/5cdxpI0dAaiprdXKt8m6MPc=";
+    hash = "sha256-5Ro+UG9pwwp656fYyCsna6P4s9Gb86Tu3Qm2WUI7tsE=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/sphinx-reredirects/default.nix b/pkgs/development/python-modules/sphinx-reredirects/default.nix
index 8fc57ab6d1f0..b250106a46c9 100644
--- a/pkgs/development/python-modules/sphinx-reredirects/default.nix
+++ b/pkgs/development/python-modules/sphinx-reredirects/default.nix
@@ -8,13 +8,13 @@
 
 buildPythonPackage rec {
   pname = "sphinx-reredirects";
-  version = "0.1.6";
+  version = "1.0.0";
   pyproject = true;
 
   src = fetchPypi {
     pname = "sphinx_reredirects";
     inherit version;
-    hash = "sha256-xJHLpUX2e+lpdQhyeBjYYmYmNmJFrmRFb+KfN+m76mQ=";
+    hash = "sha256-fJutqfEzBIn89Mcpei1toqScpId9P0LROIrh3hAZv1w=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/sphinx-sitemap/default.nix b/pkgs/development/python-modules/sphinx-sitemap/default.nix
index 84155186c163..97d643eb95ab 100644
--- a/pkgs/development/python-modules/sphinx-sitemap/default.nix
+++ b/pkgs/development/python-modules/sphinx-sitemap/default.nix
@@ -10,9 +10,9 @@
 }:
 let
   pname = "sphinx-sitemap";
-  version = "2.6.0";
+  version = "2.7.2";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   inherit pname version;
   pyproject = true;
 
@@ -20,7 +20,7 @@ buildPythonPackage {
     owner = "jdillard";
     repo = "sphinx-sitemap";
     tag = "v${version}";
-    hash = "sha256-RERa+/MVug2OQ/FAXS4LOQHB4eEuIW2rwcdZUOrr6g8=";
+    hash = "sha256-b8eo77Ab9w8JR6mLqXcIWeTkuJFTHjJBk440fksBbyw=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -34,7 +34,7 @@ buildPythonPackage {
   ];
 
   meta = with lib; {
-    changelog = "https://github.com/jdillard/sphinx-sitemap/releases/tag/v${version}";
+    changelog = "https://github.com/jdillard/sphinx-sitemap/releases/tag/${src.tag}";
     description = "Sitemap generator for Sphinx";
     homepage = "https://github.com/jdillard/sphinx-sitemap";
     maintainers = with maintainers; [ alejandrosame ];
diff --git a/pkgs/development/python-modules/sphinxcontrib-confluencebuilder/default.nix b/pkgs/development/python-modules/sphinxcontrib-confluencebuilder/default.nix
index 83b3f959af1a..0329aab01206 100644
--- a/pkgs/development/python-modules/sphinxcontrib-confluencebuilder/default.nix
+++ b/pkgs/development/python-modules/sphinxcontrib-confluencebuilder/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "sphinxcontrib-confluencebuilder";
-  version = "2.13.0";
+  version = "2.14.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "sphinxcontrib_confluencebuilder";
     inherit version;
-    hash = "sha256-2Sl0ZwdHn0dXf+kbNcxaDMfWLaGdfUgCRjKTADA+unM=";
+    hash = "sha256-3XWs1SCb6AJpYC3njbBFXsSOebNjRh0Gp1Fqi5E51lI=";
   };
 
   build-system = [ flit-core ];
diff --git a/pkgs/development/python-modules/sphinxcontrib-katex/default.nix b/pkgs/development/python-modules/sphinxcontrib-katex/default.nix
index 44f1e74e62b0..987e4d2b94d9 100644
--- a/pkgs/development/python-modules/sphinxcontrib-katex/default.nix
+++ b/pkgs/development/python-modules/sphinxcontrib-katex/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "sphinxcontrib-katex";
-  version = "0.9.10";
+  version = "0.9.11";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "sphinxcontrib_katex";
     inherit version;
-    hash = "sha256-MJqS2uJF28WE/36l+2VJcnuuleTlIAi3TSWdL9GtDew=";
+    hash = "sha256-LTKyENILvuRRpR0ZZF9v719VaLmlTigTr/uW76ZhI4o=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/sphinxext-opengraph/default.nix b/pkgs/development/python-modules/sphinxext-opengraph/default.nix
index 2f2d76bd9913..70bd42464cae 100644
--- a/pkgs/development/python-modules/sphinxext-opengraph/default.nix
+++ b/pkgs/development/python-modules/sphinxext-opengraph/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "sphinxext-opengraph";
-  version = "0.9.1";
+  version = "0.12.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "wpilibsuite";
     repo = "sphinxext-opengraph";
     tag = "v${version}";
-    hash = "sha256-B+bJ1tKqTTlbNeJLxk56o2a21n3Yg6OHwJiFfCx46aw=";
+    hash = "sha256-2ch9BxgrqbfIJ8fzFKYscha4+G7OAVz+OIOqYwX2gSA=";
   };
 
   nativeBuildInputs = [ setuptools-scm ];
@@ -43,7 +43,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Sphinx extension to generate unique OpenGraph metadata";
     homepage = "https://github.com/wpilibsuite/sphinxext-opengraph";
-    changelog = "https://github.com/wpilibsuite/sphinxext-opengraph/releases/tag/v${version}";
+    changelog = "https://github.com/wpilibsuite/sphinxext-opengraph/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ Luflosi ];
   };
diff --git a/pkgs/development/python-modules/spotifyaio/default.nix b/pkgs/development/python-modules/spotifyaio/default.nix
index b08260bf1494..5fafd5db1f8f 100644
--- a/pkgs/development/python-modules/spotifyaio/default.nix
+++ b/pkgs/development/python-modules/spotifyaio/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "spotifyaio";
-  version = "0.8.11";
+  version = "1.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "joostlek";
     repo = "python-spotify";
     tag = "v${version}";
-    hash = "sha256-mRv/bsMER+rn4JOSe2EK0ykP5oEydl8QNhtn7yN+ykE=";
+    hash = "sha256-wl8THtmdJ2l6XNDtmmnk/MF+qTZL0UsbL8o6i/Vwf5k=";
   };
 
   build-system = [ poetry-core ];
@@ -54,7 +54,7 @@ buildPythonPackage rec {
   meta = {
     description = "Module for interacting with for Spotify";
     homepage = "https://github.com/joostlek/python-spotify/";
-    changelog = "https://github.com/joostlek/python-spotify/releases/tag/v${version}";
+    changelog = "https://github.com/joostlek/python-spotify/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/spsdk/default.nix b/pkgs/development/python-modules/spsdk/default.nix
index cc518a0b3343..edc8c5e9eeb0 100644
--- a/pkgs/development/python-modules/spsdk/default.nix
+++ b/pkgs/development/python-modules/spsdk/default.nix
@@ -49,14 +49,14 @@
 
 buildPythonPackage rec {
   pname = "spsdk";
-  version = "2.6.1";
+  version = "3.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nxp-mcuxpresso";
     repo = "spsdk";
     tag = "v${version}";
-    hash = "sha256-AdW19Zf5TZ6hChXbW9dLGcMpFTQOT1wrPzEqaSfWzDE=";
+    hash = "sha256-G8UNT9lsUt6Xe++xx+Pqv4hmrkGv68w7FrZSgWJHb1k=";
   };
 
   postPatch = ''
@@ -137,7 +137,7 @@ buildPythonPackage rec {
   ];
 
   meta = {
-    changelog = "https://github.com/nxp-mcuxpresso/spsdk/blob/v${version}/docs/release_notes.rst";
+    changelog = "https://github.com/nxp-mcuxpresso/spsdk/blob/${src.tag}/docs/release_notes.rst";
     description = "NXP Secure Provisioning SDK";
     homepage = "https://github.com/nxp-mcuxpresso/spsdk";
     license = lib.licenses.bsd3;
diff --git a/pkgs/development/python-modules/sqlalchemy-cockroachdb/default.nix b/pkgs/development/python-modules/sqlalchemy-cockroachdb/default.nix
index 0cbdb6651a97..4d0ba47d58ab 100644
--- a/pkgs/development/python-modules/sqlalchemy-cockroachdb/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy-cockroachdb/default.nix
@@ -3,26 +3,25 @@
   buildPythonPackage,
   fetchPypi,
   setuptools,
-  wheel,
   sqlalchemy,
 }:
 
 buildPythonPackage rec {
   pname = "sqlalchemy-cockroachdb";
-  version = "2.0.2";
+  version = "2.0.3";
   pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-EZdW65BYVdahE0W5nP6FMDGj/lmKnEvzWo3ayfif6Mw=";
+    pname = "sqlalchemy_cockroachdb";
+    inherit version;
+    hash = "sha256-SLdj/9iypNydVkWZNKVtfV/61BXG5o0RS67l0Sz3nB0=";
   };
 
-  nativeBuildInputs = [
+  build-system = [
     setuptools
-    wheel
   ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     sqlalchemy
   ];
 
@@ -30,7 +29,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "CockroachDB dialect for SQLAlchemy";
-    homepage = "https://pypi.org/project/sqlalchemy-cockroachdb";
+    homepage = "https://github.com/cockroachdb/sqlalchemy-cockroachdb/tree/master/sqlalchemy_cockroachdb";
     license = licenses.asl20;
     maintainers = with maintainers; [ pinpox ];
   };
diff --git a/pkgs/development/python-modules/sqlalchemy/default.nix b/pkgs/development/python-modules/sqlalchemy/default.nix
index f48abe0214be..5bc964ff493a 100644
--- a/pkgs/development/python-modules/sqlalchemy/default.nix
+++ b/pkgs/development/python-modules/sqlalchemy/default.nix
@@ -4,6 +4,7 @@
   pythonOlder,
   fetchFromGitHub,
   buildPythonPackage,
+  nix-update-script,
 
   # build
   cython,
@@ -43,7 +44,7 @@
 
 buildPythonPackage rec {
   pname = "sqlalchemy";
-  version = "2.0.41";
+  version = "2.0.42";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -52,7 +53,7 @@ buildPythonPackage rec {
     owner = "sqlalchemy";
     repo = "sqlalchemy";
     tag = "rel_${lib.replaceStrings [ "." ] [ "_" ] version}";
-    hash = "sha256-DixgBUI+HJLTCsunN5Y+ogcAHnRnQ3CKSFc6HrxzsPM=";
+    hash = "sha256-e/DkS9CioMLG/qMOf0//DxMFDTep4xEtCVTp/Hn0Wiw=";
   };
 
   postPatch = ''
@@ -109,6 +110,13 @@ buildPythonPackage rec {
     "test/aaa_profiling"
   ];
 
+  passthru.updateScript = nix-update-script {
+    extraArgs = [
+      "--version-regex"
+      "^rel_([0-9]+)_([0-9]+)_([0-9]+)$"
+    ];
+  };
+
   meta = with lib; {
     changelog = "https://github.com/sqlalchemy/sqlalchemy/releases/tag/rel_${
       builtins.replaceStrings [ "." ] [ "_" ] version
diff --git a/pkgs/development/python-modules/sqlframe/default.nix b/pkgs/development/python-modules/sqlframe/default.nix
index 84885a2767cc..e5d4dca2f152 100644
--- a/pkgs/development/python-modules/sqlframe/default.nix
+++ b/pkgs/development/python-modules/sqlframe/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "sqlframe";
-  version = "3.31.3";
+  version = "3.38.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "eakmanrq";
     repo = "sqlframe";
     tag = "v${version}";
-    hash = "sha256-x9ILbtl71Xp4p5OWQ/goays5W6uE17FCes7ZVfWZBwY=";
+    hash = "sha256-ekDt9vsHdHhUNaQghG3EaM82FRZYdw+gaxENcurSayk=";
   };
 
   build-system = [
@@ -72,7 +72,7 @@ buildPythonPackage rec {
   meta = {
     description = "Turning PySpark Into a Universal DataFrame API";
     homepage = "https://github.com/eakmanrq/sqlframe";
-    changelog = "https://github.com/eakmanrq/sqlframe/releases/tag/v${version}";
+    changelog = "https://github.com/eakmanrq/sqlframe/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ GaetanLepage ];
   };
diff --git a/pkgs/development/python-modules/sqlglot/default.nix b/pkgs/development/python-modules/sqlglot/default.nix
index 7b109e1f2590..5b6bb1ceec67 100644
--- a/pkgs/development/python-modules/sqlglot/default.nix
+++ b/pkgs/development/python-modules/sqlglot/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "sqlglot";
-  version = "26.16.2";
+  version = "27.6.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     repo = "sqlglot";
     owner = "tobymao";
     tag = "v${version}";
-    hash = "sha256-uX72AHr4IC+u5AYkW/3myruVPs5NZ1V3THVg+9GWxpg=";
+    hash = "sha256-/+hrbyAQJHbKzjaBr9ssuXuKpbCSWAarLa5oX5NqfOc=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/srctools/default.nix b/pkgs/development/python-modules/srctools/default.nix
index 117a97e5b39a..7d6de7ff2184 100644
--- a/pkgs/development/python-modules/srctools/default.nix
+++ b/pkgs/development/python-modules/srctools/default.nix
@@ -4,7 +4,7 @@
   fetchPypi,
   meson,
   meson-python,
-  cython_3_1,
+  cython,
   attrs,
   useful-types,
   pytestCheckHook,
@@ -28,7 +28,7 @@ buildPythonPackage {
   build-system = [
     meson
     meson-python
-    cython_3_1
+    cython
   ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/sse-starlette/default.nix b/pkgs/development/python-modules/sse-starlette/default.nix
index e64e15fe2c0a..7298d302a41b 100644
--- a/pkgs/development/python-modules/sse-starlette/default.nix
+++ b/pkgs/development/python-modules/sse-starlette/default.nix
@@ -22,7 +22,7 @@
 
 buildPythonPackage rec {
   pname = "sse-starlette";
-  version = "2.3.6";
+  version = "3.0.2";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -31,7 +31,7 @@ buildPythonPackage rec {
     owner = "sysid";
     repo = "sse-starlette";
     tag = "v${version}";
-    hash = "sha256-7FlyV+TsVKGFsecONPm/Z50cCnyuUsr6pimPdc4Cs6c=";
+    hash = "sha256-9NI6CUcK5AqITKxtCMz9Z1+Ke87u2y2E0LlwsFUDhgw=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/ssh-python/default.nix b/pkgs/development/python-modules/ssh-python/default.nix
index c87730307d50..2cd514419151 100644
--- a/pkgs/development/python-modules/ssh-python/default.nix
+++ b/pkgs/development/python-modules/ssh-python/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "ssh-python";
-  version = "1.1.1";
+  version = "03.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "ParallelSSH";
     repo = "ssh-python";
     tag = version;
-    hash = "sha256-kidz4uHT5C8TUROLGQUHihemYtwOoWZQNw7ElbwYKLM=";
+    hash = "sha256-hrTf0eywmK/sbZ7fVPatJvcWh5e1/rCLpk0yQKlyLYU=";
   };
 
   build-system = [ setuptools ];
@@ -40,7 +40,7 @@ buildPythonPackage rec {
   meta = {
     description = "Python bindings for libssh C library";
     homepage = "https://github.com/ParallelSSH/ssh-python";
-    changelog = "https://github.com/ParallelSSH/ssh-python/blob/${version}/Changelog.rst";
+    changelog = "https://github.com/ParallelSSH/ssh-python/blob/${src.tag}/Changelog.rst";
     license = lib.licenses.lgpl21Only;
     maintainers = with lib.maintainers; [ infinidoge ];
   };
diff --git a/pkgs/development/python-modules/sshtunnel/default.nix b/pkgs/development/python-modules/sshtunnel/default.nix
index 08d6bf114082..c119e971e965 100644
--- a/pkgs/development/python-modules/sshtunnel/default.nix
+++ b/pkgs/development/python-modules/sshtunnel/default.nix
@@ -35,6 +35,7 @@ buildPythonPackage rec {
   ];
 
   meta = with lib; {
+    broken = true; # incompatible with paramiko 4.0 https://github.com/pahaz/sshtunnel/issues/299
     description = "Pure python SSH tunnels";
     mainProgram = "sshtunnel";
     homepage = "https://github.com/pahaz/sshtunnel";
diff --git a/pkgs/development/python-modules/stamina/default.nix b/pkgs/development/python-modules/stamina/default.nix
index e1eda7924fcd..7b764abe8bcb 100644
--- a/pkgs/development/python-modules/stamina/default.nix
+++ b/pkgs/development/python-modules/stamina/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "stamina";
-  version = "24.3.0";
+  version = "25.1.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "hynek";
     repo = "stamina";
     tag = version;
-    hash = "sha256-DasubVqKRhX4CRyKyJ3fIA9Rxmy+kGxkW0pDdu8OPPo=";
+    hash = "sha256-TehGqR3vbjLNByHZE2+Ytq52dpEpiL6+7TRUKwXcC1M=";
   };
 
   nativeBuildInputs = [
@@ -47,7 +47,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Production-grade retries for Python";
     homepage = "https://github.com/hynek/stamina";
-    changelog = "https://github.com/hynek/stamina/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/hynek/stamina/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ mbalatsko ];
   };
diff --git a/pkgs/development/python-modules/starlette/default.nix b/pkgs/development/python-modules/starlette/default.nix
index 91ae514304b6..c327f0bf46db 100644
--- a/pkgs/development/python-modules/starlette/default.nix
+++ b/pkgs/development/python-modules/starlette/default.nix
@@ -28,7 +28,7 @@
 
 buildPythonPackage rec {
   pname = "starlette";
-  version = "0.46.2";
+  version = "0.47.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -37,7 +37,7 @@ buildPythonPackage rec {
     owner = "encode";
     repo = "starlette";
     tag = version;
-    hash = "sha256-K/0Y6plw+zbRKpzSLbEG6xb30e/Ou//4jddpUYdfs/k=";
+    hash = "sha256-FseSZrLWuNaLro2iLMcfiCrbx2Gz8+aEmLaSk/+PgN4=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/statmake/default.nix b/pkgs/development/python-modules/statmake/default.nix
index ffaa22ef6841..1dbb09f0d5f4 100644
--- a/pkgs/development/python-modules/statmake/default.nix
+++ b/pkgs/development/python-modules/statmake/default.nix
@@ -17,7 +17,7 @@
 
 buildPythonPackage rec {
   pname = "statmake";
-  version = "0.6.0";
+  version = "1.1.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
@@ -26,7 +26,7 @@ buildPythonPackage rec {
     owner = "daltonmaag";
     repo = "statmake";
     tag = "v${version}";
-    hash = "sha256-3BZ71JVvj7GCojM8ycu160viPj8BLJ1SiW86Df2fzsw=";
+    hash = "sha256-UqL3l27Icu5DoVvFYctbOF7gvKvVV6hK1R5A1y9SYkU=";
   };
 
   nativeBuildInputs = [ poetry-core ];
@@ -59,7 +59,7 @@ buildPythonPackage rec {
     description = "Applies STAT information from a Stylespace to a variable font";
     mainProgram = "statmake";
     homepage = "https://github.com/daltonmaag/statmake";
-    changelog = "https://github.com/daltonmaag/statmake/releases/tag/v${version}";
+    changelog = "https://github.com/daltonmaag/statmake/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/statsmodels/default.nix b/pkgs/development/python-modules/statsmodels/default.nix
index 0499b856422f..345bbe85f1e6 100644
--- a/pkgs/development/python-modules/statsmodels/default.nix
+++ b/pkgs/development/python-modules/statsmodels/default.nix
@@ -7,7 +7,6 @@
   packaging,
   pandas,
   patsy,
-  pythonOlder,
   scipy,
   setuptools,
   setuptools-scm,
@@ -19,13 +18,16 @@ buildPythonPackage rec {
   version = "0.14.5";
   pyproject = true;
 
-  disabled = pythonOlder "3.9";
-
   src = fetchPypi {
     inherit pname version;
     hash = "sha256-3iYOWMzP0s7d+DW1WjVyM9bKhToapPkPdVOlLMccbd8=";
   };
 
+  postPatch = ''
+    substituteInPlace pyproject.toml \
+      --replace-fail 'setuptools_scm[toml]>=8,<9' 'setuptools_scm[toml]'
+  '';
+
   build-system = [
     cython
     numpy
diff --git a/pkgs/development/python-modules/stone/default.nix b/pkgs/development/python-modules/stone/default.nix
index e58b1870a6d5..d567ff447c5d 100644
--- a/pkgs/development/python-modules/stone/default.nix
+++ b/pkgs/development/python-modules/stone/default.nix
@@ -2,6 +2,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   lib,
+  jinja2,
   mock,
   packaging,
   ply,
@@ -13,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "stone";
-  version = "3.3.8";
+  version = "3.3.9";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -22,7 +23,7 @@ buildPythonPackage rec {
     owner = "dropbox";
     repo = "stone";
     tag = "v${version}";
-    hash = "sha256-W+wRVWPaAzhdHMVE54GEJC/YJqYZVJhwFDWWSMKUPdw=";
+    hash = "sha256-3tUV2JrE3S2Tj/9aHvzfBTkIWUmWzkWNsVLr5yWRE/Q=";
   };
 
   postPatch = ''
@@ -33,6 +34,7 @@ buildPythonPackage rec {
   build-system = [ setuptools ];
 
   dependencies = [
+    jinja2
     ply
     six
     packaging
@@ -46,9 +48,9 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "stone" ];
 
   meta = with lib; {
-    description = "Official Api Spec Language for Dropbox";
+    description = "Official API Spec Language for Dropbox API V2";
     homepage = "https://github.com/dropbox/stone";
-    changelog = "https://github.com/dropbox/stone/releases/tag/v${version}";
+    changelog = "https://github.com/dropbox/stone/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
     mainProgram = "stone";
diff --git a/pkgs/development/python-modules/strawberry-django/default.nix b/pkgs/development/python-modules/strawberry-django/default.nix
index 5f4dddff4a8e..b5abd44e5a9b 100644
--- a/pkgs/development/python-modules/strawberry-django/default.nix
+++ b/pkgs/development/python-modules/strawberry-django/default.nix
@@ -26,6 +26,7 @@
   factory-boy,
   pillow,
   psycopg2,
+  pytest-asyncio,
   pytest-cov-stub,
   pytest-django,
   pytest-mock,
@@ -34,16 +35,21 @@
 
 buildPythonPackage rec {
   pname = "strawberry-django";
-  version = "0.60.0";
+  version = "0.65.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "strawberry-graphql";
     repo = "strawberry-django";
     tag = "v${version}";
-    hash = "sha256-mMI/tPdt9XK6Lz7VmI3uDxcCjIuidUeGHjG+6AQLoeQ=";
+    hash = "sha256-cX/eG6qWe/h9U4p1pMhhI+bZ5pLmiwGeYxNthKvdI6o=";
   };
 
+  postPatch = ''
+    # django.core.exceptions.ImproperlyConfigured: You're using the staticfiles app without having set the required STATIC_URL setting.
+    echo 'STATIC_URL = "static/"' >> tests/django_settings.py
+  '';
+
   build-system = [
     poetry-core
     setuptools
@@ -71,6 +77,7 @@ buildPythonPackage rec {
     factory-boy
     pillow
     psycopg2
+    pytest-asyncio
     pytest-cov-stub
     pytest-django
     pytest-mock
diff --git a/pkgs/development/python-modules/strawberry-graphql/default.nix b/pkgs/development/python-modules/strawberry-graphql/default.nix
index 8db811e095b9..7378ba44d71b 100644
--- a/pkgs/development/python-modules/strawberry-graphql/default.nix
+++ b/pkgs/development/python-modules/strawberry-graphql/default.nix
@@ -44,7 +44,7 @@
 
 buildPythonPackage rec {
   pname = "strawberry-graphql";
-  version = "0.275.5";
+  version = "0.278.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -53,7 +53,7 @@ buildPythonPackage rec {
     owner = "strawberry-graphql";
     repo = "strawberry";
     tag = version;
-    hash = "sha256-bgKxZuk0cp43oyPbgTdx5aG5l1HSCz0JOVNeaCJRhdo=";
+    hash = "sha256-GNjjSD40fhbMqfvuYSuP3tU8lfOqBGJIsoGWZCfj6C4=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/streamdeck/default.nix b/pkgs/development/python-modules/streamdeck/default.nix
index 2d4009c57c7e..16ba119d7ca2 100644
--- a/pkgs/development/python-modules/streamdeck/default.nix
+++ b/pkgs/development/python-modules/streamdeck/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "streamdeck";
-  version = "0.9.6";
+  version = "0.9.7";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-7ELZtxGzUuonStMFputI7OHu06W//nC5KOCC3OD3iPA=";
+    hash = "sha256-jVhuZihvjuA5rwl55JAmtFq+h/f5M68Vo44jh8HjUI4=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/stripe/default.nix b/pkgs/development/python-modules/stripe/default.nix
index 60e199561ab8..618d1cf3a1cd 100644
--- a/pkgs/development/python-modules/stripe/default.nix
+++ b/pkgs/development/python-modules/stripe/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "stripe";
-  version = "12.1.0";
+  version = "12.4.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-SkuFFpUs9QlemCJX8NR8RcHSu/d0PiyxLWaF9V2ouNQ=";
+    hash = "sha256-HNH1sFeYZ5IwgbrPWUlZ0fQD8hgiOgbcOCc76wfQFWc=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/subliminal/default.nix b/pkgs/development/python-modules/subliminal/default.nix
index 638f8a1315a8..43fa45173a13 100644
--- a/pkgs/development/python-modules/subliminal/default.nix
+++ b/pkgs/development/python-modules/subliminal/default.nix
@@ -31,7 +31,7 @@
 
 buildPythonPackage rec {
   pname = "subliminal";
-  version = "2.2.1";
+  version = "2.3.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -40,7 +40,7 @@ buildPythonPackage rec {
     owner = "Diaoul";
     repo = "subliminal";
     tag = version;
-    hash = "sha256-g7gg2qdLKl7bg/nNXRWN9wZaNShOOc38sVASZrIycMU=";
+    hash = "sha256-eAXzD6diep28wCZjWLOZpOX1bnakEldhs2LX5CPu5OI=";
   };
 
   build-system = [ setuptools ];
@@ -85,7 +85,7 @@ buildPythonPackage rec {
     description = "Python library to search and download subtitles";
     mainProgram = "subliminal";
     homepage = "https://github.com/Diaoul/subliminal";
-    changelog = "https://github.com/Diaoul/subliminal/blob/${version}/HISTORY.rst";
+    changelog = "https://github.com/Diaoul/subliminal/blob/${src.tag}/HISTORY.rst";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ doronbehar ];
   };
diff --git a/pkgs/development/python-modules/sunpy/default.nix b/pkgs/development/python-modules/sunpy/default.nix
index 44ef351a37c3..e09eae34658e 100644
--- a/pkgs/development/python-modules/sunpy/default.nix
+++ b/pkgs/development/python-modules/sunpy/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "sunpy";
-  version = "6.1.1";
+  version = "7.0.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-xgmmsbC7KGvUJ4mUD1T8t9aQDfz+IX31T4Wf9gguE9s=";
+    hash = "sha256-9ZCG9CtTpgGGlqtXcl2epRBzFcbVvIMzZcXk5CQ5/+A=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/svg-py/default.nix b/pkgs/development/python-modules/svg-py/default.nix
index add0da17c737..759e8bef0001 100644
--- a/pkgs/development/python-modules/svg-py/default.nix
+++ b/pkgs/development/python-modules/svg-py/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "svg-py";
-  version = "1.6.0";
+  version = "1.7.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "orsinium-labs";
     repo = "svg.py";
     tag = version;
-    hash = "sha256-XuSv4CVcbwWHuHiXxx4PfGJ8Pi+tfufbAdUiTFWNLcc=";
+    hash = "sha256-WRPHNgaKjim91pLdM8iQ1/1DBm7+lU7hFH0vXTguG1s=";
   };
 
   build-system = [ flit-core ];
diff --git a/pkgs/development/python-modules/svgdigitizer/default.nix b/pkgs/development/python-modules/svgdigitizer/default.nix
index 025fb86893b7..ce39c5090344 100644
--- a/pkgs/development/python-modules/svgdigitizer/default.nix
+++ b/pkgs/development/python-modules/svgdigitizer/default.nix
@@ -29,14 +29,14 @@
 
 buildPythonPackage rec {
   pname = "svgdigitizer";
-  version = "0.12.6";
+  version = "0.13.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "echemdb";
     repo = "svgdigitizer";
     tag = version;
-    hash = "sha256-aodPjms92+/6bbheIs/8w+M4T+mfw5PWf1dsxFuojwA=";
+    hash = "sha256-UlcvCfNoEijIKoqSbufEZ6988rqwT2xDEy4P/9fdgVM=";
   };
 
   build-system = [
@@ -77,7 +77,7 @@ buildPythonPackage rec {
   meta = {
     description = "(x,y) Data Points from SVG files";
     homepage = "https://github.com/echemdb/svgdigitizer";
-    changelog = "https://github.com/echemdb/svgdigitizer/blob/${src.rev}/ChangeLog";
+    changelog = "https://github.com/echemdb/svgdigitizer/blob/${src.tag}/ChangeLog";
     license = lib.licenses.gpl3Only;
     maintainers = with lib.maintainers; [ doronbehar ];
   };
diff --git a/pkgs/development/python-modules/swcgeom/default.nix b/pkgs/development/python-modules/swcgeom/default.nix
index e940ac5e6c49..a2654535d466 100644
--- a/pkgs/development/python-modules/swcgeom/default.nix
+++ b/pkgs/development/python-modules/swcgeom/default.nix
@@ -26,9 +26,9 @@
 }:
 
 let
-  version = "0.19.3";
+  version = "0.19.4";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "swcgeom";
   inherit version;
   pyproject = true;
@@ -37,7 +37,7 @@ buildPythonPackage {
     owner = "yzx9";
     repo = "swcgeom";
     tag = "v${version}";
-    hash = "sha256-mpp8Dw0XcU59fYt7vjswAnXCmrRP3mhbgTDG+J4UwzI=";
+    hash = "sha256-emffSI4LO+5UU267d+qj/NCVvHmRpzikJ7jdCOtPFNo=";
   };
 
   build-system = [
@@ -88,7 +88,7 @@ buildPythonPackage {
   meta = {
     description = "Neuron geometry library for swc format";
     homepage = "https://github.com/yzx9/swcgeom";
-    changelog = "https://github.com/yzx9/swcgeom/blob/v${version}/CHANGELOG.md";
+    changelog = "https://github.com/yzx9/swcgeom/blob/${src.tag}/CHANGELOG.md";
     license = lib.licenses.asl20;
     maintainers = with lib.maintainers; [ yzx9 ];
   };
diff --git a/pkgs/development/python-modules/systemdunitparser/default.nix b/pkgs/development/python-modules/systemdunitparser/default.nix
index 0b3431c06680..b3e008f0d744 100644
--- a/pkgs/development/python-modules/systemdunitparser/default.nix
+++ b/pkgs/development/python-modules/systemdunitparser/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "systemdunitparser";
-  version = "0.3";
+  version = "0.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "sgallagher";
     repo = "systemdunitparser";
-    rev = version;
-    hash = "sha256-lcvXEieaifPUDhLdaz2FXaNdbw7wKR+x/kC+MMDT0tE=";
+    tag = version;
+    hash = "sha256-BlOj1rvRfh0SQ7io2N8MsMvAtWvXk0V6hYzlOSrr7hU=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/tagoio-sdk/default.nix b/pkgs/development/python-modules/tagoio-sdk/default.nix
index 8a7687a66602..efc9fff18e22 100644
--- a/pkgs/development/python-modules/tagoio-sdk/default.nix
+++ b/pkgs/development/python-modules/tagoio-sdk/default.nix
@@ -14,7 +14,7 @@
 
 buildPythonPackage rec {
   pname = "tagoio-sdk";
-  version = "4.3.0";
+  version = "5.0.3";
   format = "pyproject";
 
   disabled = pythonOlder "3.9";
@@ -23,7 +23,7 @@ buildPythonPackage rec {
     owner = "tago-io";
     repo = "sdk-python";
     tag = "v${version}";
-    hash = "sha256-37/fg2vbwYPhYPvSJ2YxWAPrfspqTE3thIL/VR1+AkI=";
+    hash = "sha256-PNPG1FUniwZhOKjynp4ba6kjGJmB/OW0F5b2ZOYaYwY=";
   };
 
   pythonRelaxDeps = [ "requests" ];
@@ -49,7 +49,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Module for interacting with Tago.io";
     homepage = "https://github.com/tago-io/sdk-python";
-    changelog = "https://github.com/tago-io/sdk-python/releases/tag/v${version}";
+    changelog = "https://github.com/tago-io/sdk-python/releases/tag/${src.tag}";
     license = licenses.asl20;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/tcxparser/default.nix b/pkgs/development/python-modules/tcxparser/default.nix
index 5c06e2f83bf0..97b1e8d97c79 100644
--- a/pkgs/development/python-modules/tcxparser/default.nix
+++ b/pkgs/development/python-modules/tcxparser/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "tcxparser";
-  version = "2.4.0";
+  version = "2.4.0-r1";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "vkurup";
     repo = "python-tcxparser";
     tag = version;
-    hash = "sha256-YZgzvwRy47MOTClAeJhzD6kZhGgCeVSGko6LgR/Uy0o=";
+    hash = "sha256-lQczTuxmxu4nCPJsgblrW2RXST7kvhtPnscemwXCx0Y=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/tempora/default.nix b/pkgs/development/python-modules/tempora/default.nix
index 070a3637b803..15ad8fc444ab 100644
--- a/pkgs/development/python-modules/tempora/default.nix
+++ b/pkgs/development/python-modules/tempora/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "tempora";
-  version = "5.8.0";
+  version = "5.8.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,9 +21,13 @@ buildPythonPackage rec {
     owner = "jaraco";
     repo = "tempora";
     tag = "v${version}";
-    hash = "sha256-ojllPOmz+laxFMCobLcDnCVMvo1354vS5nBnO1mxokM=";
+    hash = "sha256-1Zeo8bUCHKPZ6I0HGT7bIh7IgbRL4j9Cv3t9FFiZ72s=";
   };
 
+  postPatch = ''
+    sed -i "/coherent\.licensed/d" pyproject.toml
+  '';
+
   build-system = [ setuptools-scm ];
 
   dependencies = [
diff --git a/pkgs/development/python-modules/tensorboard/default.nix b/pkgs/development/python-modules/tensorboard/default.nix
index 2a7be3be31b1..f145e93f0791 100644
--- a/pkgs/development/python-modules/tensorboard/default.nix
+++ b/pkgs/development/python-modules/tensorboard/default.nix
@@ -9,9 +9,9 @@
   markdown,
   numpy,
   packaging,
+  pillow,
   protobuf,
   setuptools,
-  six,
   tensorboard-data-server,
   werkzeug,
   standard-imghdr,
@@ -21,7 +21,7 @@
 
 buildPythonPackage rec {
   pname = "tensorboard";
-  version = "2.19.0";
+  version = "2.20.0";
   format = "wheel";
 
   # tensorflow/tensorboard is built from a downloaded wheel, because
@@ -30,7 +30,7 @@ buildPythonPackage rec {
     inherit pname version format;
     dist = "py3";
     python = "py3";
-    hash = "sha256-XnG5hmOmQafOim5wsL6OGkwMRdSHYLB2ODrEdVw1uaA=";
+    hash = "sha256-ncn5eMuEwHI6z5o0XZbBhPApPRjxZruNWe4Jjmz6q6Y=";
   };
 
   pythonRelaxDeps = [
@@ -44,9 +44,9 @@ buildPythonPackage rec {
     markdown
     numpy
     packaging
+    pillow
     protobuf
     setuptools
-    six
     tensorboard-data-server
     werkzeug
 
diff --git a/pkgs/development/python-modules/terminado/default.nix b/pkgs/development/python-modules/terminado/default.nix
index 7773844c2feb..6b266e62ee74 100644
--- a/pkgs/development/python-modules/terminado/default.nix
+++ b/pkgs/development/python-modules/terminado/default.nix
@@ -34,6 +34,7 @@ buildPythonPackage rec {
     pytest-timeout
     pytestCheckHook
   ];
+  pytestFlags = [ "-Wignore::pytest.PytestUnraisableExceptionWarning" ];
 
   meta = with lib; {
     description = "Terminals served by Tornado websockets";
diff --git a/pkgs/development/python-modules/tesserocr/default.nix b/pkgs/development/python-modules/tesserocr/default.nix
index 40c5dbfb49af..8166f0b86626 100644
--- a/pkgs/development/python-modules/tesserocr/default.nix
+++ b/pkgs/development/python-modules/tesserocr/default.nix
@@ -44,6 +44,9 @@ buildPythonPackage rec {
   # https://github.com/sirfz/tesserocr/issues/314
   postPatch = ''
     sed -i '/allheaders.h/a\    pass\n\ncdef extern from "leptonica/pix_internal.h" nogil:' tesserocr/tesseract.pxd
+
+    substituteInPlace setup.py \
+      --replace-fail "Cython>=0.23,<3.1.0" Cython
   '';
 
   build-system = [
diff --git a/pkgs/development/python-modules/testfixtures/default.nix b/pkgs/development/python-modules/testfixtures/default.nix
index 0cc3d187af0b..547ad584741a 100644
--- a/pkgs/development/python-modules/testfixtures/default.nix
+++ b/pkgs/development/python-modules/testfixtures/default.nix
@@ -1,7 +1,6 @@
 {
   lib,
   buildPythonPackage,
-  fetchpatch2,
   fetchPypi,
   mock,
   pytestCheckHook,
@@ -13,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "testfixtures";
-  version = "8.3.0";
+  version = "9.1.0";
   pyproject = true;
   # DO NOT CONTACT upstream.
   # https://github.com/simplistix/ is only concerned with internal CI process.
@@ -26,17 +25,9 @@ buildPythonPackage rec {
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-1MC4SvLyZ2EPkIAJtQ1vmDpOWK3iLGe6tnh7WkAtWcA=";
+    hash = "sha256-UX6c81OUJyNTOuEQDKRd0n/geFw60nZQdfXLHLzgFII=";
   };
 
-  patches = [
-    (fetchpatch2 {
-      name = "python313-compat.patch";
-      url = "https://github.com/simplistix/testfixtures/commit/a23532c7bc685589cce6a5037821a74da48959e7.patch?full_index=1";
-      hash = "sha256-k0j/WgA+6LNTYJ233GJjeRU403bJJRxbpOu+BUsMeyQ=";
-    })
-  ];
-
   build-system = [ setuptools ];
 
   nativeCheckInputs = [
@@ -46,6 +37,11 @@ buildPythonPackage rec {
     twisted
   ];
 
+  disabledTests = [
+    "test_filter_missing"
+    "test_filter_present"
+  ];
+
   disabledTestPaths = [
     # Django is too much hasle to setup at the moment
     "testfixtures/tests/test_django"
diff --git a/pkgs/development/python-modules/testrail-api/default.nix b/pkgs/development/python-modules/testrail-api/default.nix
index 309f46fd27db..7a7d3cbcf0ab 100644
--- a/pkgs/development/python-modules/testrail-api/default.nix
+++ b/pkgs/development/python-modules/testrail-api/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "testrail-api";
-  version = "1.13.3";
+  version = "1.13.4";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "tolstislon";
     repo = "testrail-api";
     tag = version;
-    hash = "sha256-jsdxKcXFjP9ifQLwRN3M2xpx1a+KpGv469Ag6NNph6w=";
+    hash = "sha256-0RrNqSuimXXBEkjmnRQiIXUDy6z2y9wKneWqBTi5FHY=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/textstat/default.nix b/pkgs/development/python-modules/textstat/default.nix
index d5dacef7917c..c0d3ef77cc89 100644
--- a/pkgs/development/python-modules/textstat/default.nix
+++ b/pkgs/development/python-modules/textstat/default.nix
@@ -8,15 +8,15 @@
   pytest,
 }:
 buildPythonPackage rec {
-  version = "0.7.4";
+  version = "0.7.8";
   pname = "textstat";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "textstat";
     repo = "textstat";
-    rev = version;
-    hash = "sha256-UOCWsIdoVGxmkro4kNBYNMYhA3kktngRDxKjo6o+GXY=";
+    tag = version;
+    hash = "sha256-EEGTmZXTAZ4fsfZk/ictvjQ6lCAi5Ma/Ae83ziGDQXQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/textual-autocomplete/default.nix b/pkgs/development/python-modules/textual-autocomplete/default.nix
index 22ef79217757..5b2768f33090 100644
--- a/pkgs/development/python-modules/textual-autocomplete/default.nix
+++ b/pkgs/development/python-modules/textual-autocomplete/default.nix
@@ -9,13 +9,13 @@
 }:
 buildPythonPackage rec {
   pname = "textual-autocomplete";
-  version = "4.0.4";
+  version = "4.0.5";
   pyproject = true;
 
   src = fetchPypi {
     pname = "textual_autocomplete";
     inherit version;
-    hash = "sha256-CWmYe5ClPB91dT3+OtLH6g2XS1g53CoAotMywAAFeHE=";
+    hash = "sha256-24Bm/H2Hx0r9CDZ/j8IUS87F3b3qY6Y3JJdU6dH9h1U=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/textual/default.nix b/pkgs/development/python-modules/textual/default.nix
index 45dcec6ce6a5..de8a460ee8ae 100644
--- a/pkgs/development/python-modules/textual/default.nix
+++ b/pkgs/development/python-modules/textual/default.nix
@@ -29,14 +29,14 @@
 
 buildPythonPackage rec {
   pname = "textual";
-  version = "4.0.0";
+  version = "5.2.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Textualize";
     repo = "textual";
     tag = "v${version}";
-    hash = "sha256-rVDr4Snp5qnErxWRM9yoxnzzX8gg8nD3RbBkL1rmgqI=";
+    hash = "sha256-cv8pLEPmL4jtiMCohDPqBJwGnLcr3d1MXKdNvQHEQN8=";
   };
 
   build-system = [ poetry-core ];
diff --git a/pkgs/development/python-modules/thermopro-ble/default.nix b/pkgs/development/python-modules/thermopro-ble/default.nix
index 0da7947b12c6..8e6f8fa45df6 100644
--- a/pkgs/development/python-modules/thermopro-ble/default.nix
+++ b/pkgs/development/python-modules/thermopro-ble/default.nix
@@ -5,6 +5,7 @@
   buildPythonPackage,
   fetchFromGitHub,
   poetry-core,
+  pytest-asyncio,
   pytest-cov-stub,
   pytestCheckHook,
   pythonOlder,
@@ -34,6 +35,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    pytest-asyncio
     pytest-cov-stub
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/thinc/default.nix b/pkgs/development/python-modules/thinc/default.nix
index b577d4cbf2b2..37115ac988aa 100644
--- a/pkgs/development/python-modules/thinc/default.nix
+++ b/pkgs/development/python-modules/thinc/default.nix
@@ -22,12 +22,12 @@
 
 buildPythonPackage rec {
   pname = "thinc";
-  version = "8.3.6";
+  version = "9.1.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-SZg/m33cQ0OpUyaUqRGN0hbXpgBSCiGEmkO2wmjsbK0=";
+    hash = "sha256-IfrimG13d6bwULkEbcnqsRhS8cmpl9zJAy8+zCJ4Sko=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/thrift/default.nix b/pkgs/development/python-modules/thrift/default.nix
index e3301d3ab4cc..214aaea6ced1 100644
--- a/pkgs/development/python-modules/thrift/default.nix
+++ b/pkgs/development/python-modules/thrift/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "thrift";
-  version = "0.21.0";
+  version = "0.22.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Xm98UPk26/oj6SQimvyV6yGfjI5agyAt1KORJEgD5AI=";
+    hash = "sha256-QugnavvV9U/h02SFi2h3vF5aSl7Wn2oAW5TKSRj+FGY=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/thriftpy2/default.nix b/pkgs/development/python-modules/thriftpy2/default.nix
index db5292a9f5d6..03ac0195c2d3 100644
--- a/pkgs/development/python-modules/thriftpy2/default.nix
+++ b/pkgs/development/python-modules/thriftpy2/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "thriftpy2";
-  version = "0.5.2";
+  version = "0.5.3";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "Thriftpy";
     repo = "thriftpy2";
     tag = "v${version}";
-    hash = "sha256-GBJL+IqZpT1/msJLiwiS5YDyB4hIe/e3pYPWx0A+lWY=";
+    hash = "sha256-idUKqpyRj8lq9Aq6vEEeYEawzRPOdNsySnkgfhwPtMc=";
   };
 
   build-system = [ setuptools ];
@@ -42,7 +42,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Python module for Apache Thrift";
     homepage = "https://github.com/Thriftpy/thriftpy2";
-    changelog = "https://github.com/Thriftpy/thriftpy2/blob/v${version}/CHANGES.rst";
+    changelog = "https://github.com/Thriftpy/thriftpy2/blob/${src.tag}/CHANGES.rst";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/tianshou/default.nix b/pkgs/development/python-modules/tianshou/default.nix
index 2336768719cf..7cb9052c2d02 100644
--- a/pkgs/development/python-modules/tianshou/default.nix
+++ b/pkgs/development/python-modules/tianshou/default.nix
@@ -47,7 +47,7 @@
 
 buildPythonPackage rec {
   pname = "tianshou";
-  version = "1.1.0";
+  version = "1.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.11";
@@ -56,7 +56,7 @@ buildPythonPackage rec {
     owner = "thu-ml";
     repo = "tianshou";
     tag = "v${version}";
-    hash = "sha256-eiwbSX8Q3KF6h7CfjuZ+7HlXwpvLga1NVr3e+FkPaHc=";
+    hash = "sha256-lJAxjE+GMwssov1r4jOCOTf5Aonu+q6FSz5oWvZpuQQ=";
   };
 
   pythonRelaxDeps = [
@@ -182,7 +182,7 @@ buildPythonPackage rec {
   meta = {
     description = "Elegant PyTorch deep reinforcement learning library";
     homepage = "https://github.com/thu-ml/tianshou";
-    changelog = "https://github.com/thu-ml/tianshou/releases/tag/v${version}";
+    changelog = "https://github.com/thu-ml/tianshou/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ derdennisop ];
   };
diff --git a/pkgs/development/python-modules/tifffile/default.nix b/pkgs/development/python-modules/tifffile/default.nix
index 763049874841..f9d0087ee418 100644
--- a/pkgs/development/python-modules/tifffile/default.nix
+++ b/pkgs/development/python-modules/tifffile/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "tifffile";
-  version = "2025.5.10";
+  version = "2025.6.11";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-AYM100KDqj/YwmO65cPCtmHrxFVI/eMVBAFvyue/EQM=";
+    hash = "sha256-Ds5MLnoQZWlX1Wigk7B1E8ByjTDBvYzBJyWQH//bcUM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/tika-client/default.nix b/pkgs/development/python-modules/tika-client/default.nix
index f70747fef55b..0639af3739a2 100644
--- a/pkgs/development/python-modules/tika-client/default.nix
+++ b/pkgs/development/python-modules/tika-client/default.nix
@@ -9,7 +9,7 @@
 
 buildPythonPackage rec {
   pname = "tika-client";
-  version = "0.9.0";
+  version = "0.10.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -18,7 +18,7 @@ buildPythonPackage rec {
     owner = "stumpylog";
     repo = "tika-client";
     tag = version;
-    hash = "sha256-lg6syUbEbPb70iBa4lw5fVN8cvfWY3bkG2jNGxxNLDo=";
+    hash = "sha256-XYyMp+02lWzE+3Txr+shVGVwalLEJHvoy988tA7SWgY=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/tiledb/default.nix b/pkgs/development/python-modules/tiledb/default.nix
index ca08af4ac055..d43419139032 100644
--- a/pkgs/development/python-modules/tiledb/default.nix
+++ b/pkgs/development/python-modules/tiledb/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "tiledb";
-  version = "0.33.2";
+  version = "0.34.2";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "TileDB-Inc";
     repo = "TileDB-Py";
     tag = version;
-    hash = "sha256-c7mEYgk+9sHvOI7z/jp/VI3mA7XOlNFik8X5rTyBclg=";
+    hash = "sha256-EXRrWp/2sMn7DCzgXk5L0692rhGtQZwWpVWYnfrxmGA=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/tiler/default.nix b/pkgs/development/python-modules/tiler/default.nix
index 40766f6436c6..16dc515e04f2 100644
--- a/pkgs/development/python-modules/tiler/default.nix
+++ b/pkgs/development/python-modules/tiler/default.nix
@@ -13,12 +13,12 @@
 
 buildPythonPackage rec {
   pname = "tiler";
-  version = "0.5.7";
+  version = "0.6.0";
   format = "pyproject";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-2HWO/iJ9RCWNVmw2slu9F/+Mchk3evB5/F8EfbuMI/Y=";
+    hash = "sha256-ps0uHgzPa+ZoXXrB+0gfuVIEBUNmym/ym6xCxiyHhxA=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/tld/default.nix b/pkgs/development/python-modules/tld/default.nix
index 767651e322df..c07115722106 100644
--- a/pkgs/development/python-modules/tld/default.nix
+++ b/pkgs/development/python-modules/tld/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "tld";
-  version = "0.13";
+  version = "0.13.1";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-k93l4cBL3xhEl26uRAcGN50h9KsjW3PAXXSD4HT7Vik=";
+    hash = "sha256-dewAk2y89WT2c2HEFxM2NEC2xO8PDBWStbD75ywXo1A=";
   };
 
   nativeCheckInputs = [
@@ -31,6 +31,8 @@ buildPythonPackage rec {
     faker
   ];
 
+  doCheck = false; # missing pytest-codeblock
+
   # These tests require network access, but disabledTestPaths doesn't work.
   # the file needs to be `import`ed by another Python test file, so it
   # can't simply be removed.
diff --git a/pkgs/development/python-modules/torchio/default.nix b/pkgs/development/python-modules/torchio/default.nix
index fe99a4035539..bab297da0a92 100644
--- a/pkgs/development/python-modules/torchio/default.nix
+++ b/pkgs/development/python-modules/torchio/default.nix
@@ -29,14 +29,14 @@
 
 buildPythonPackage rec {
   pname = "torchio";
-  version = "0.20.17";
+  version = "0.20.19";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "TorchIO-project";
     repo = "torchio";
     tag = "v${version}";
-    hash = "sha256-kZCbQGIkWmlXl25UviPrSDo0swCjWnvTTkBnxGI0Y7U=";
+    hash = "sha256-fx3aExmRMbzXG2MVpWrsssH658Ll4x+FC2ARK6oIGBw=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/total-connect-client/default.nix b/pkgs/development/python-modules/total-connect-client/default.nix
index 79c1d1860437..5f61748dc1fc 100644
--- a/pkgs/development/python-modules/total-connect-client/default.nix
+++ b/pkgs/development/python-modules/total-connect-client/default.nix
@@ -7,13 +7,14 @@
   pytestCheckHook,
   pythonOlder,
   requests-mock,
+  requests-oauthlib,
   setuptools,
   zeep,
 }:
 
 buildPythonPackage rec {
   pname = "total-connect-client";
-  version = "2025.1.4";
+  version = "2025.5";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -22,7 +23,7 @@ buildPythonPackage rec {
     owner = "craigjmidwinter";
     repo = "total-connect-client";
     tag = version;
-    hash = "sha256-zzSYi/qhHmugH30bnYHK9lCBVN5wuv6n9rvaZC/sIag=";
+    hash = "sha256-xVpR5gd185eZBoqUhVVcFGPbPFjCavwOZP7yFObzGic=";
   };
 
   build-system = [ setuptools ];
@@ -32,6 +33,7 @@ buildPythonPackage rec {
   dependencies = [
     pycryptodome
     pyjwt
+    requests-oauthlib
     zeep
   ];
 
@@ -45,7 +47,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Interact with Total Connect 2 alarm systems";
     homepage = "https://github.com/craigjmidwinter/total-connect-client";
-    changelog = "https://github.com/craigjmidwinter/total-connect-client/releases/tag/${version}";
+    changelog = "https://github.com/craigjmidwinter/total-connect-client/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ dotlambda ];
   };
diff --git a/pkgs/development/python-modules/tox/default.nix b/pkgs/development/python-modules/tox/default.nix
index 0427ed68a800..93be8bfdb688 100644
--- a/pkgs/development/python-modules/tox/default.nix
+++ b/pkgs/development/python-modules/tox/default.nix
@@ -24,14 +24,14 @@
 
 buildPythonPackage rec {
   pname = "tox";
-  version = "4.26.0";
+  version = "4.28.4";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "tox-dev";
     repo = "tox";
     tag = version;
-    hash = "sha256-VySdeZDC71vi2mOtjdFJ4iCSpWbFEW3nzrVucPUz/oc=";
+    hash = "sha256-EKJsFf4LvfDi3OL6iNhKEBl5zlpdLET9RkfHEP7E9xU=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/trackpy/default.nix b/pkgs/development/python-modules/trackpy/default.nix
index 1190aad1f313..2f7b012cf10b 100644
--- a/pkgs/development/python-modules/trackpy/default.nix
+++ b/pkgs/development/python-modules/trackpy/default.nix
@@ -16,7 +16,7 @@
 
 buildPythonPackage rec {
   pname = "trackpy";
-  version = "0.6.4";
+  version = "0.7";
   format = "setuptools";
 
   disabled = pythonOlder "3.8";
@@ -25,7 +25,7 @@ buildPythonPackage rec {
     owner = "soft-matter";
     repo = "trackpy";
     tag = "v${version}";
-    hash = "sha256-6i1IfdxgV6bpf//mXATpnsQ0zN26S8rlL0/1ql68sd8=";
+    hash = "sha256-3e+gHdn/4n8T78eA3Gjz1TdSI4Hd935U2pqd8wG+U0M=";
   };
 
   propagatedBuildInputs = [
@@ -52,7 +52,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Particle-tracking toolkit";
     homepage = "https://github.com/soft-matter/trackpy";
-    changelog = "https://github.com/soft-matter/trackpy/releases/tag/v${version}";
+    changelog = "https://github.com/soft-matter/trackpy/releases/tag/${src.tag}";
     license = licenses.bsd3;
     maintainers = [ ];
     broken = (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64);
diff --git a/pkgs/development/python-modules/trakit/default.nix b/pkgs/development/python-modules/trakit/default.nix
index 5fbe67a6cf17..afbd0c8f0424 100644
--- a/pkgs/development/python-modules/trakit/default.nix
+++ b/pkgs/development/python-modules/trakit/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "trakit";
-  version = "0.2.2";
+  version = "0.2.5";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -28,8 +28,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "ratoaq2";
     repo = "trakit";
-    rev = version;
-    hash = "sha256-VV+pdsQ5WEALYZgu4AmvNce1rCTLSYPZtTMjh+aExsU=";
+    tag = version;
+    hash = "sha256-x/83yRzvQ81+wS0lJr52KYBMoPvSVDr17ppxG/lSfUg=";
   };
 
   build-system = [ poetry-core ];
@@ -57,7 +57,7 @@ buildPythonPackage rec {
   meta = {
     description = "Guess additional information from track titles";
     homepage = "https://github.com/ratoaq2/trakit";
-    changelog = "https://github.com/ratoaq2/trakit/releases/tag/${version}";
+    changelog = "https://github.com/ratoaq2/trakit/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ eljamm ];
   };
diff --git a/pkgs/development/python-modules/tree-sitter-markdown/default.nix b/pkgs/development/python-modules/tree-sitter-markdown/default.nix
index 70511b603127..554324248f4b 100644
--- a/pkgs/development/python-modules/tree-sitter-markdown/default.nix
+++ b/pkgs/development/python-modules/tree-sitter-markdown/default.nix
@@ -11,14 +11,14 @@
 buildPythonPackage rec {
   pname = "tree-sitter-markdown";
   # only update to the latest version on PyPI
-  version = "0.3.2";
+  version = "0.5.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "tree-sitter-grammars";
     repo = "tree-sitter-markdown";
     tag = "v${version}";
-    hash = "sha256-OlVuHz9/5lxsGVT+1WhKx+7XtQiezMW1odiHGinzro8=";
+    hash = "sha256-I9KDE1yZce8KIGPLG5tmv5r/NCWwN95R6fIyvGdx+So=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/tree-sitter-rust/default.nix b/pkgs/development/python-modules/tree-sitter-rust/default.nix
index 8820bd0680b4..f720341200b1 100644
--- a/pkgs/development/python-modules/tree-sitter-rust/default.nix
+++ b/pkgs/development/python-modules/tree-sitter-rust/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "tree-sitter-rust";
-  version = "0.23.2";
+  version = "0.24.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "tree-sitter";
     repo = "tree-sitter-rust";
     tag = "v${version}";
-    hash = "sha256-aT+tlrEKMgWqTEq/NHh8Vj92h6i1aU6uPikDyaP2vfc=";
+    hash = "sha256-y3sJURlSTM7LRRN5WGIAeslsdRZU522Tfcu6dnXH/XQ=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/tree-sitter/default.nix b/pkgs/development/python-modules/tree-sitter/default.nix
index 4c176538beb0..74d54cfedbd6 100644
--- a/pkgs/development/python-modules/tree-sitter/default.nix
+++ b/pkgs/development/python-modules/tree-sitter/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "tree-sitter";
-  version = "0.24.0";
+  version = "0.25.0";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-q9la9lyi9Pfso1Y0M5HtZp52Tzd0i1NSlG8A9/x45zQ=";
+    hash = "sha256-FciHdc8k2wZne6/mLfBYpkV9im3eZ7qkjdNyO5BeeaY=";
   };
 
   # see https://github.com/tree-sitter/py-tree-sitter/issues/330#issuecomment-2629403946
diff --git a/pkgs/development/python-modules/treelib/default.nix b/pkgs/development/python-modules/treelib/default.nix
index 1fd566f4c27d..77b3fc634047 100644
--- a/pkgs/development/python-modules/treelib/default.nix
+++ b/pkgs/development/python-modules/treelib/default.nix
@@ -8,14 +8,14 @@
 
 buildPythonPackage rec {
   pname = "treelib";
-  version = "1.7.1";
+  version = "1.8.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "caesar0301";
     repo = "treelib";
     tag = "v${version}";
-    hash = "sha256-+6Ur2hEhUxHccZLdWHCyCkdI6Zr/wGTBIIzzbpEEiSY=";
+    hash = "sha256-jvaZVy+FUcCcIdvWK6zFL8IBVH+hMiPMmv5shFXLo0k=";
   };
 
   propagatedBuildInputs = [ six ];
diff --git a/pkgs/development/python-modules/treq/default.nix b/pkgs/development/python-modules/treq/default.nix
index 2f19ecf00a0a..621dc5ad2acc 100644
--- a/pkgs/development/python-modules/treq/default.nix
+++ b/pkgs/development/python-modules/treq/default.nix
@@ -5,11 +5,12 @@
 
   # build-system
   incremental,
-  setuptools,
+  hatchling,
 
   # dependencies
   attrs,
   hyperlink,
+  multipart,
   requests,
   twisted,
 
@@ -19,23 +20,24 @@
 
 buildPythonPackage rec {
   pname = "treq";
-  version = "24.9.1";
+  version = "25.5.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Fdp/xATz5O1Z0Kvl+O70lm+rvmGAOaKiO8fBUwXO/qg=";
+    hash = "sha256-Jd3jpVroXsLyxWMyyZrvJVqxT5l9DQBVLr/xNTipgEo=";
   };
 
   nativeBuildInputs = [
     incremental
-    setuptools
+    hatchling
   ];
 
   propagatedBuildInputs = [
     attrs
     hyperlink
     incremental
+    multipart
     requests
     twisted
   ]
diff --git a/pkgs/development/python-modules/trino-python-client/default.nix b/pkgs/development/python-modules/trino-python-client/default.nix
index 333d3fc2ee2d..bbf712cdf37e 100644
--- a/pkgs/development/python-modules/trino-python-client/default.nix
+++ b/pkgs/development/python-modules/trino-python-client/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "trino-python-client";
-  version = "0.323.0";
+  version = "0.334.0";
   format = "setuptools";
 
   src = fetchFromGitHub {
     repo = "trino-python-client";
     owner = "trinodb";
     tag = version;
-    hash = "sha256-Nr7p7x5cxxuPv2NUh1uMth97OQ+H2KBlu0SHVJ7Zu1M=";
+    hash = "sha256-cSwMmzIUFYX8VgSwobth8EsARUff3hhfBf+IrhuFSYM=";
   };
 
   nativeBuildInputs = [ setuptools ];
@@ -62,7 +62,7 @@ buildPythonPackage rec {
   disabledTestMarks = [ "auth" ];
 
   meta = with lib; {
-    changelog = "https://github.com/trinodb/trino-python-client/blob/${version}/CHANGES.md";
+    changelog = "https://github.com/trinodb/trino-python-client/blob/${src.tag}/CHANGES.md";
     description = "Client for the Trino distributed SQL Engine";
     homepage = "https://github.com/trinodb/trino-python-client";
     license = licenses.asl20;
diff --git a/pkgs/development/python-modules/trl/default.nix b/pkgs/development/python-modules/trl/default.nix
index 102e879db55f..bc89ac18fd4b 100644
--- a/pkgs/development/python-modules/trl/default.nix
+++ b/pkgs/development/python-modules/trl/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "trl";
-  version = "0.19.0";
+  version = "0.20.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "huggingface";
     repo = "trl";
     tag = "v${version}";
-    hash = "sha256-TlTq3tIQfNuI+CPvIy/qPFiKPhoSQd7g7FDj4F7C3CQ=";
+    hash = "sha256-z14refdNySnKcfFq54l+slsi4SLe5FG8UNoAKxfmAy0=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/trytond/default.nix b/pkgs/development/python-modules/trytond/default.nix
index 19c9040d1f60..7ce695852925 100644
--- a/pkgs/development/python-modules/trytond/default.nix
+++ b/pkgs/development/python-modules/trytond/default.nix
@@ -30,14 +30,14 @@
 
 buildPythonPackage rec {
   pname = "trytond";
-  version = "7.6.3";
+  version = "7.6.5";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-i/EI9XGtQhdWPfyVIsiFX01b+nv2VmTOuevVKUu43nI=";
+    hash = "sha256-1HMFHBRuVJG5oonfxQzsgonJGG5ZmOXoLDkRlryTSXM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/ttkbootstrap/default.nix b/pkgs/development/python-modules/ttkbootstrap/default.nix
index 458ae0b51d69..626030ea4d8a 100644
--- a/pkgs/development/python-modules/ttkbootstrap/default.nix
+++ b/pkgs/development/python-modules/ttkbootstrap/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "ttkbootstrap";
-  version = "1.12.1";
-  format = "setuptools";
+  version = "1.14.2";
+  pyproject = true;
 
   src = fetchFromGitHub {
     owner = "israel-dryer";
     repo = "ttkbootstrap";
     tag = "v${version}";
-    hash = "sha256-Pkp45lB1Xeu9ZoLjKS8aSW2By/k3ID1qwMig/jdYHh4=";
+    hash = "sha256-D1Gx+gP6xbeOhKcjb2uhwhHlYFhma9y04tp0ibJCw6g=";
   };
 
   build-system = [
@@ -27,6 +27,8 @@ buildPythonPackage rec {
     pillow
   ];
 
+  pythonRelaxDeps = [ "pillow" ];
+
   # As far as I can tell, all tests require a display and are not normal-ish pytests
   # but appear to just be python scripts that run demos of components?
   doCheck = false;
diff --git a/pkgs/development/python-modules/twisted/default.nix b/pkgs/development/python-modules/twisted/default.nix
index 678392a3c3fa..4b3c8b3e576f 100644
--- a/pkgs/development/python-modules/twisted/default.nix
+++ b/pkgs/development/python-modules/twisted/default.nix
@@ -55,7 +55,7 @@
 
 buildPythonPackage rec {
   pname = "twisted";
-  version = "24.11.0";
+  version = "25.5.0";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -63,7 +63,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit pname version;
     extension = "tar.gz";
-    hash = "sha256-aV0FVtXsV53MRk0oVrY0iA7RMZ9FsQ0ZBD8rV+sBFbU=";
+    hash = "sha256-HesnI1jLa+Hj6PxvnIs2946w+nwiM9Lb4R7G/uBOoxY=";
   };
 
   __darwinAllowLocalNetworking = true;
diff --git a/pkgs/development/python-modules/type-infer/default.nix b/pkgs/development/python-modules/type-infer/default.nix
index 371708f7d0d0..5bc50ccf9e45 100644
--- a/pkgs/development/python-modules/type-infer/default.nix
+++ b/pkgs/development/python-modules/type-infer/default.nix
@@ -24,7 +24,7 @@ let
     d.stopwords
   ]);
 
-  version = "0.0.21";
+  version = "0.0.23";
   tag = "v${version}";
 in
 buildPythonPackage {
@@ -38,7 +38,7 @@ buildPythonPackage {
     owner = "mindsdb";
     repo = "type_infer";
     inherit tag;
-    hash = "sha256-Q5f4WihaT88R+x4jMUuRNBvWglkGdS5oi+o9jOk+tSE=";
+    hash = "sha256-tqT/MTcSHcKGoPUUzjPLFpOTchannFsCd2VMC+8kVZ8=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/typed-settings/default.nix b/pkgs/development/python-modules/typed-settings/default.nix
index 2e37f4f02ac1..78802f283b33 100644
--- a/pkgs/development/python-modules/typed-settings/default.nix
+++ b/pkgs/development/python-modules/typed-settings/default.nix
@@ -21,7 +21,7 @@
 }:
 buildPythonPackage rec {
   pname = "typed-settings";
-  version = "24.6.0";
+  version = "25.0.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "typed_settings";
     inherit version;
-    hash = "sha256-mlWV3jP4BFKiA44Bi8RVCP/8I4qHUvCPXAPcjnvA0eI=";
+    hash = "sha256-Kbr9Mc1PXgD+OAw/ADp3HXC+rnAJcFEqjlXxQq/1wRM=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/typeguard/default.nix b/pkgs/development/python-modules/typeguard/default.nix
index 4873e61061da..b14939e91f51 100644
--- a/pkgs/development/python-modules/typeguard/default.nix
+++ b/pkgs/development/python-modules/typeguard/default.nix
@@ -17,14 +17,14 @@
 
 buildPythonPackage rec {
   pname = "typeguard";
-  version = "4.4.2";
+  version = "4.4.4";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-pvEGWBPjLvNlvDs/UDr4qW+d1OADOgLCjEpJg96MbEk=";
+    hash = "sha256-On/S3/twXU0O+u1DBqcEyJud7oULaI8GCosWFaeeX3Q=";
   };
 
   outputs = [
@@ -53,6 +53,10 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  # To prevent test from writing out non-reproducible .pyc files
+  # https://github.com/agronholm/typeguard/blob/ca512c28132999da514f31b5e93ed2f294ca8f77/tests/test_typechecked.py#L641
+  preCheck = "export PYTHONDONTWRITEBYTECODE=1";
+
   pythonImportsCheck = [ "typeguard" ];
 
   meta = {
diff --git a/pkgs/development/python-modules/typer/default.nix b/pkgs/development/python-modules/typer/default.nix
index 044cda773072..337369c869df 100644
--- a/pkgs/development/python-modules/typer/default.nix
+++ b/pkgs/development/python-modules/typer/default.nix
@@ -25,14 +25,14 @@
 
 buildPythonPackage rec {
   pname = "typer";
-  version = "0.15.4";
+  version = "0.16.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "fastapi";
     repo = "typer";
     tag = version;
-    hash = "sha256-lZJKE8bxYxmDxAmnL7L/fL89gMe44voyHT20DUazd9E=";
+    hash = "sha256-WB9PIxagTHutfk3J+mNTVK8bC7TMDJquu3GLBQgaras=";
   };
 
   build-system = [ pdm-backend ];
@@ -73,6 +73,12 @@ buildPythonPackage rec {
     "test_install_completion"
   ];
 
+  disabledTestPaths = [
+    # likely click 8.2 compat issue
+    "tests/test_tutorial/test_parameter_types/test_bool/test_tutorial002_an.py"
+    "tests/test_tutorial/test_parameter_types/test_bool/test_tutorial002.py"
+  ];
+
   pythonImportsCheck = [ "typer" ];
 
   meta = {
diff --git a/pkgs/development/python-modules/types-colorama/default.nix b/pkgs/development/python-modules/types-colorama/default.nix
index c14b2e4ded7a..404583aeffda 100644
--- a/pkgs/development/python-modules/types-colorama/default.nix
+++ b/pkgs/development/python-modules/types-colorama/default.nix
@@ -7,12 +7,13 @@
 
 buildPythonPackage rec {
   pname = "types-colorama";
-  version = "0.4.15.20240311";
+  version = "0.4.15.20250801";
   pyproject = true;
 
   src = fetchPypi {
-    inherit pname version;
-    hash = "sha256-oo5/mNF9KxT7lWXTI4jkGfQQj1V6fZOaZjGZabK5nHo=";
+    pname = "types_colorama";
+    inherit version;
+    hash = "sha256-AlZdE9aJY9EiN9PzMPXs1iKjF597WxTufxYUYnDDV/U=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/types-lxml/default.nix b/pkgs/development/python-modules/types-lxml/default.nix
index 270dac5caa1d..02e93cd4cd46 100644
--- a/pkgs/development/python-modules/types-lxml/default.nix
+++ b/pkgs/development/python-modules/types-lxml/default.nix
@@ -20,14 +20,14 @@
 
 buildPythonPackage rec {
   pname = "types-lxml";
-  version = "2025.03.04";
+  version = "2025.03.30";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "abelcheung";
     repo = "types-lxml";
     tag = version;
-    hash = "sha256-dA9sspqEChHarwk2LrK2F7Ehri2ffjOlGk3nj4KFsfU=";
+    hash = "sha256-+H1VOO72/zq0nITq2a+4wEarPqBdBF7wIfRShFBsLPw=";
   };
 
   pythonRelaxDeps = [ "beautifulsoup4" ];
diff --git a/pkgs/development/python-modules/types-protobuf/default.nix b/pkgs/development/python-modules/types-protobuf/default.nix
index 75d8c55bfaa3..f8f2066c7bd5 100644
--- a/pkgs/development/python-modules/types-protobuf/default.nix
+++ b/pkgs/development/python-modules/types-protobuf/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "types-protobuf";
-  version = "5.29.1.20250315";
+  version = "6.30.2.20250703";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "types_protobuf";
     inherit version;
-    hash = "sha256-CwW8NGIdBG3lS5T93V9Os7+En+LhOlD4+46J81BF/0k=";
+    hash = "sha256-YJqXR1S7tx+hePxkH1EFA5Xo4YSfSdBCCmKB7Y0d30Y=";
   };
 
   propagatedBuildInputs = [ types-futures ];
diff --git a/pkgs/development/python-modules/types-psutil/default.nix b/pkgs/development/python-modules/types-psutil/default.nix
index 92cd3efb2a96..008396640946 100644
--- a/pkgs/development/python-modules/types-psutil/default.nix
+++ b/pkgs/development/python-modules/types-psutil/default.nix
@@ -6,13 +6,13 @@
 
 buildPythonPackage rec {
   pname = "types-psutil";
-  version = "7.0.0.20250401";
+  version = "7.0.0.20250801";
   format = "setuptools";
 
   src = fetchPypi {
     pname = "types_psutil";
     inherit version;
-    hash = "sha256-Kn1mPAiIoHn8FkPrwQmtEuV6IclVKp4gNdpQQZEzbb8=";
+    hash = "sha256-AjC1YjQlLMb1nDYdzLqqCPMIjqNWk2er5pAEhdOIyX0=";
   };
 
   # Module doesn't have tests
diff --git a/pkgs/development/python-modules/types-python-dateutil/default.nix b/pkgs/development/python-modules/types-python-dateutil/default.nix
index 0dd1b01af601..a7590da661ba 100644
--- a/pkgs/development/python-modules/types-python-dateutil/default.nix
+++ b/pkgs/development/python-modules/types-python-dateutil/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "types-python-dateutil";
-  version = "2.9.0.20241206";
+  version = "2.9.0.20250708";
   pyproject = true;
 
   src = fetchPypi {
     pname = "types_python_dateutil";
     inherit version;
-    hash = "sha256-GPSTQUwm/7ppKnI2n+p6FUxQJkYwHr/j1WoEs3ZyhMs=";
+    hash = "sha256-zNvXXastbJaWw1BXnzTP/iwoHkxfJ6WFsqJDjdHVyKs=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/types-pyyaml/default.nix b/pkgs/development/python-modules/types-pyyaml/default.nix
index 46893f2f9f57..e9dbdeb82433 100644
--- a/pkgs/development/python-modules/types-pyyaml/default.nix
+++ b/pkgs/development/python-modules/types-pyyaml/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "types-pyyaml";
-  version = "6.0.12.20250402";
+  version = "6.0.12.20250516";
   pyproject = true;
 
   src = fetchPypi {
     pname = "types_pyyaml";
     inherit version;
-    hash = "sha256-18E8Pm0zW2r0sBIqAf8dJwq6hKuW0aGhBj7Lo+E+wHU=";
+    hash = "sha256-nyGnAhb8D6GyFqgXbbX54K9us10vKTKsuHaJ0Dpb9ro=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/types-setuptools/default.nix b/pkgs/development/python-modules/types-setuptools/default.nix
index 6c508858478f..8fdcc17567d7 100644
--- a/pkgs/development/python-modules/types-setuptools/default.nix
+++ b/pkgs/development/python-modules/types-setuptools/default.nix
@@ -7,13 +7,13 @@
 
 buildPythonPackage rec {
   pname = "types-setuptools";
-  version = "78.1.0.20250329";
+  version = "80.9.0.20250801";
   pyproject = true;
 
   src = fetchPypi {
     pname = "types_setuptools";
     inherit version;
-    hash = "sha256-MeYpUMOLjMHFEUsHdQTjZCaGCgZCh8rBG5ZmqzpIMjQ=";
+    hash = "sha256-4ekmgvoHImQVOWu04tMfEWoW/75YOwWwH5kQ/N6jt+g=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/typeshed-client/default.nix b/pkgs/development/python-modules/typeshed-client/default.nix
index 748fe0f05016..507bfd771f41 100644
--- a/pkgs/development/python-modules/typeshed-client/default.nix
+++ b/pkgs/development/python-modules/typeshed-client/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "typeshed-client";
-  version = "2.7.0";
+  version = "2.8.2";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -20,7 +20,7 @@ buildPythonPackage rec {
     owner = "JelleZijlstra";
     repo = "typeshed_client";
     tag = "v${version}";
-    hash = "sha256-dEfKZ930Jxa84HUqKpsL2JWQLeeWx6gIMtFHTbiw3Es=";
+    hash = "sha256-+muWm2/Psp8V1n7mEloc+ltuwHG/uRvDUgSFRNzz5EQ=";
   };
 
   build-system = [ setuptools ];
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Retrieve information from typeshed and other typing stubs";
     homepage = "https://github.com/JelleZijlstra/typeshed_client";
-    changelog = "https://github.com/JelleZijlstra/typeshed_client/releases/tag/v${version}";
+    changelog = "https://github.com/JelleZijlstra/typeshed_client/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/typing-extensions/default.nix b/pkgs/development/python-modules/typing-extensions/default.nix
index b31e894e59db..662ad9c5eb9a 100644
--- a/pkgs/development/python-modules/typing-extensions/default.nix
+++ b/pkgs/development/python-modules/typing-extensions/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "typing-extensions";
-  version = "4.13.2";
+  version = "4.14.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "python";
     repo = "typing_extensions";
     tag = version;
-    hash = "sha256-6wG+f0+sGI3sWy4EYeWDTffLicMiIkACHwrw0oP4Z1w=";
+    hash = "sha256-KzfxVUgPN1cLg73A3TC2zQjYfeLc8x9TtbLmOfmlOkY=";
   };
 
   nativeBuildInputs = [ flit-core ];
diff --git a/pkgs/development/python-modules/tyro/default.nix b/pkgs/development/python-modules/tyro/default.nix
index c0d4ccddee26..6422a960ccd1 100644
--- a/pkgs/development/python-modules/tyro/default.nix
+++ b/pkgs/development/python-modules/tyro/default.nix
@@ -26,14 +26,14 @@
 
 buildPythonPackage rec {
   pname = "tyro";
-  version = "0.9.19";
+  version = "0.9.27";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "brentyi";
     repo = "tyro";
     tag = "v${version}";
-    hash = "sha256-A1Vplc84Xy8TufqmklPUzIdgiPpFcIjqV0eUgdKmYRM=";
+    hash = "sha256-2duLVdBwNpGWCV+WgtzyXjoVhukVjUUhIWXVBEk4QIA=";
   };
 
   build-system = [ hatchling ];
@@ -62,7 +62,7 @@ buildPythonPackage rec {
   meta = {
     description = "CLI interfaces & config objects, from types";
     homepage = "https://github.com/brentyi/tyro";
-    changelog = "https://github.com/brentyi/tyro/releases/tag/v${version}";
+    changelog = "https://github.com/brentyi/tyro/releases/tag/${src.tag}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [ hoh ];
   };
diff --git a/pkgs/development/python-modules/uart-devices/default.nix b/pkgs/development/python-modules/uart-devices/default.nix
index a8ae51c93c63..3005eb14e7d2 100644
--- a/pkgs/development/python-modules/uart-devices/default.nix
+++ b/pkgs/development/python-modules/uart-devices/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "uart-devices";
-  version = "0.1.0";
+  version = "0.1.1";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
     owner = "bdraco";
     repo = "uart-devices";
     tag = "v${version}";
-    hash = "sha256-rmOWyTdOwnlr8Rwsvd2oeZq79LuGVJDAkIW2/9gGrKQ=";
+    hash = "sha256-vBwQXeXw9y7eETtlC4dcqGytIgrAm7iomnvoaxhl6JI=";
   };
 
   postPatch = ''
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "UART Devices for Linux";
     homepage = "https://github.com/bdraco/uart-devices";
-    changelog = "https://github.com/bdraco/uart-devices/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/bdraco/uart-devices/blob/${src.tag}/CHANGELOG.md";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
     platforms = platforms.linux;
diff --git a/pkgs/development/python-modules/uasiren/default.nix b/pkgs/development/python-modules/uasiren/default.nix
index 7b26d889cedc..e82ee94bb7ae 100644
--- a/pkgs/development/python-modules/uasiren/default.nix
+++ b/pkgs/development/python-modules/uasiren/default.nix
@@ -10,6 +10,7 @@
   aiohttp,
 
   # tests
+  pytest-asyncio,
   pytestCheckHook,
 }:
 
@@ -33,7 +34,10 @@ buildPythonPackage {
 
   propagatedBuildInputs = [ aiohttp ];
 
-  nativeCheckInputs = [ pytestCheckHook ];
+  nativeCheckInputs = [
+    pytest-asyncio
+    pytestCheckHook
+  ];
 
   pythonImportsCheck = [
     "uasiren"
diff --git a/pkgs/development/python-modules/ueberzug/default.nix b/pkgs/development/python-modules/ueberzug/default.nix
index 633e2d9d7db2..d0169e0f6e39 100644
--- a/pkgs/development/python-modules/ueberzug/default.nix
+++ b/pkgs/development/python-modules/ueberzug/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "ueberzug";
-  version = "18.1.9";
+  version = "18.3.1";
   format = "setuptools";
 
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "7ce49f351132c7d1b0f8097f6e4c5635376151ca59318540da3e296e5b21adc3";
+    sha256 = "sha256-1Lk4E5YwEq2mUnYbIWDhzz9/CCwfXMJ11/TtJ44ugOk=";
   };
 
   buildInputs = [
diff --git a/pkgs/development/python-modules/ufo2ft/default.nix b/pkgs/development/python-modules/ufo2ft/default.nix
index a7b85b658083..871fb640c09f 100644
--- a/pkgs/development/python-modules/ufo2ft/default.nix
+++ b/pkgs/development/python-modules/ufo2ft/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "ufo2ft";
-  version = "3.5.1";
+  version = "3.6.0";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-FUITbL+FnscmZjZMlgh/dX4+tJR6MD0LoH5jDNisQkI=";
+    hash = "sha256-hKqTjD8cTgyxHZnaojPAT5JY11okvLiNOnemoULnpmw=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/ufolib2/default.nix b/pkgs/development/python-modules/ufolib2/default.nix
index 6597a46dabeb..6d6ab0af094c 100644
--- a/pkgs/development/python-modules/ufolib2/default.nix
+++ b/pkgs/development/python-modules/ufolib2/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "ufolib2";
-  version = "0.17.1";
+  version = "0.18.1";
   format = "pyproject";
 
   src = fetchFromGitHub {
     owner = "fonttools";
     repo = "ufoLib2";
     tag = "v${version}";
-    hash = "sha256-pVwQOVtUUDphBZIUoiIf19DdZ+t7uS32Ery8+e2ZLlE=";
+    hash = "sha256-YFGgPpiEurPaTUFaSMsVBKS4Ob+vPyZhputfRE39wtg=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/uharfbuzz/default.nix b/pkgs/development/python-modules/uharfbuzz/default.nix
index b04167f1e6db..d03057e8cc14 100644
--- a/pkgs/development/python-modules/uharfbuzz/default.nix
+++ b/pkgs/development/python-modules/uharfbuzz/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "uharfbuzz";
-  version = "0.45.0";
+  version = "0.51.1";
   pyproject = true;
 
   disabled = pythonOlder "3.5";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     repo = "uharfbuzz";
     tag = "v${version}";
     fetchSubmodules = true;
-    hash = "sha256-dfEyeejJdLHGHH+YI0mWdjF2rvFpM6/KVm2tLo9ssUs=";
+    hash = "sha256-mVxG0unTjMjb0/6w58Py+TARw8YmOWljTlQQwUEdMpg=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/ultralytics/default.nix b/pkgs/development/python-modules/ultralytics/default.nix
index 926844ac46f6..04048239733f 100644
--- a/pkgs/development/python-modules/ultralytics/default.nix
+++ b/pkgs/development/python-modules/ultralytics/default.nix
@@ -32,14 +32,14 @@
 
 buildPythonPackage rec {
   pname = "ultralytics";
-  version = "8.3.143";
+  version = "8.3.174";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "ultralytics";
     repo = "ultralytics";
     tag = "v${version}";
-    hash = "sha256-qpFQcGLTEQS7Bt9CvdXgv2JyNfOONS0Cf71dckCrlPw=";
+    hash = "sha256-wQ16e67ldrV8KwAXoLyxqzx9DG+LAmU5Mt+65dQzUkY=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/umap-learn/default.nix b/pkgs/development/python-modules/umap-learn/default.nix
index 616aefb657eb..5b462a1c3769 100644
--- a/pkgs/development/python-modules/umap-learn/default.nix
+++ b/pkgs/development/python-modules/umap-learn/default.nix
@@ -34,14 +34,14 @@
 
 buildPythonPackage rec {
   pname = "umap-learn";
-  version = "0.5.8";
+  version = "0.5.9.post2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lmcinnes";
     repo = "umap";
     tag = "release-${version}";
-    hash = "sha256-VR+qBZyFtpW/xuFXI8pxDkkwJKt9qajnUtvuZLFZtF0=";
+    hash = "sha256-ollUXPVB07v6DkQ/d1eke0/j1f4Ekfygo1r6CtIRTuk=";
   };
 
   build-system = [ setuptools ];
@@ -101,7 +101,7 @@ buildPythonPackage rec {
   meta = {
     description = "Uniform Manifold Approximation and Projection";
     homepage = "https://github.com/lmcinnes/umap";
-    changelog = "https://github.com/lmcinnes/umap/releases/tag/release-${version}";
+    changelog = "https://github.com/lmcinnes/umap/releases/tag/release-${src.tag}";
     license = lib.licenses.bsd3;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/unidata-blocks/default.nix b/pkgs/development/python-modules/unidata-blocks/default.nix
index df0f39d9ce77..716e67b2f29c 100644
--- a/pkgs/development/python-modules/unidata-blocks/default.nix
+++ b/pkgs/development/python-modules/unidata-blocks/default.nix
@@ -11,7 +11,7 @@
 
 buildPythonPackage rec {
   pname = "unidata-blocks";
-  version = "0.0.16";
+  version = "0.0.17";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     pname = "unidata_blocks";
     inherit version;
-    hash = "sha256-b/5Yq9wI+qSYSObBMCqZ3j8fSXwe4ssenNlvpkJSZro=";
+    hash = "sha256-QI9niECwNRyVpyzjaibPmlXxLpIbVA5v0bz94s0dDtM=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/unsloth-zoo/default.nix b/pkgs/development/python-modules/unsloth-zoo/default.nix
index 03f4a6e9d577..d5f50d0578ec 100644
--- a/pkgs/development/python-modules/unsloth-zoo/default.nix
+++ b/pkgs/development/python-modules/unsloth-zoo/default.nix
@@ -27,14 +27,14 @@
 
 buildPythonPackage rec {
   pname = "unsloth-zoo";
-  version = "2025.6.4";
+  version = "2025.8.1";
   pyproject = true;
 
   # no tags on GitHub
   src = fetchPypi {
     pname = "unsloth_zoo";
     inherit version;
-    hash = "sha256-3KLsFYhnTPqaeydFJDHr+qNkTVi2NL3ADjzkd0NBOQQ=";
+    hash = "sha256-AkAfd+dJb8A9cUYK/VH30Q5xN2BW/x4zyndnIyN9y14=";
   };
 
   # pyproject.toml requires an obsolete version of protobuf,
diff --git a/pkgs/development/python-modules/unsloth/default.nix b/pkgs/development/python-modules/unsloth/default.nix
index 1e9124ad1a62..dc45bf8ded2f 100644
--- a/pkgs/development/python-modules/unsloth/default.nix
+++ b/pkgs/development/python-modules/unsloth/default.nix
@@ -31,14 +31,14 @@
 
 buildPythonPackage rec {
   pname = "unsloth";
-  version = "2025.6.5";
+  version = "2025.8.1";
   pyproject = true;
 
   # Tags on the GitHub repo don't match
   src = fetchPypi {
     pname = "unsloth";
     inherit version;
-    hash = "sha256-o4c4gANnjM+z4Dp/0BZ48SMLMbCyIgjF3C5Q/AXV49A=";
+    hash = "sha256-hkE+f6apgilrE0lFTWRe8PEvRQ71YuoHpQgzd/R/FaI=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/unstructured-client/default.nix b/pkgs/development/python-modules/unstructured-client/default.nix
index b3c58f576e57..c92072ee35b8 100644
--- a/pkgs/development/python-modules/unstructured-client/default.nix
+++ b/pkgs/development/python-modules/unstructured-client/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "unstructured-client";
-  version = "0.38.1";
+  version = "0.42.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "Unstructured-IO";
     repo = "unstructured-python-client";
     tag = "v${version}";
-    hash = "sha256-gzNPzS//7MU6nX3cA0p6dPqIG273VlGMU0ePyObn4d4=";
+    hash = "sha256-LXCKD2LL1rFObr2Ew0vsa5Uh96sR8/821ecL/il30r0=";
   };
 
   preBuild = ''
diff --git a/pkgs/development/python-modules/unstructured/default.nix b/pkgs/development/python-modules/unstructured/default.nix
index fb11ac599003..5cd2137eca44 100644
--- a/pkgs/development/python-modules/unstructured/default.nix
+++ b/pkgs/development/python-modules/unstructured/default.nix
@@ -116,9 +116,9 @@
   grpcio,
 }:
 let
-  version = "0.17.2";
+  version = "0.18.12";
 in
-buildPythonPackage {
+buildPythonPackage rec {
   pname = "unstructured";
   inherit version;
   pyproject = true;
@@ -127,7 +127,7 @@ buildPythonPackage {
     owner = "Unstructured-IO";
     repo = "unstructured";
     tag = version;
-    hash = "sha256-DbNfhJzpPJObACWSc2r16kjIE2X/CrOCiT7fdgGNwIg=";
+    hash = "sha256-YZsfpfkvjkNStYhU4lC3I/Hr1ahJ1wccyJ8lckwejaA=";
   };
 
   build-system = [ setuptools ];
@@ -278,7 +278,7 @@ buildPythonPackage {
     description = "Open source libraries and APIs to build custom preprocessing pipelines for labeling, training, or production machine learning pipelines";
     mainProgram = "unstructured-ingest";
     homepage = "https://github.com/Unstructured-IO/unstructured";
-    changelog = "https://github.com/Unstructured-IO/unstructured/blob/${version}/CHANGELOG.md";
+    changelog = "https://github.com/Unstructured-IO/unstructured/blob/${src.tag}/CHANGELOG.md";
     license = licenses.asl20;
     maintainers = with maintainers; [ happysalada ];
   };
diff --git a/pkgs/development/python-modules/upcloud-api/default.nix b/pkgs/development/python-modules/upcloud-api/default.nix
index e4b35381fbd7..2d5c43ecfbdc 100644
--- a/pkgs/development/python-modules/upcloud-api/default.nix
+++ b/pkgs/development/python-modules/upcloud-api/default.nix
@@ -10,14 +10,14 @@
 
 buildPythonPackage rec {
   pname = "upcloud-api";
-  version = "2.6.0";
+  version = "2.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "UpCloudLtd";
     repo = "upcloud-python-api";
     tag = "v${version}";
-    hash = "sha256-RDGRue9hejNPKIP61GtJHMG5rG3CKvJdsYxVrp6I5W0=";
+    hash = "sha256-YTccjuoagjS/Gllw8VtJ4NFoVqN1YeqXdgHI7BtP98w=";
   };
 
   build-system = [ setuptools ];
@@ -32,7 +32,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "upcloud_api" ];
 
   meta = with lib; {
-    changelog = "https://github.com/UpCloudLtd/upcloud-python-api/blob/${src.rev}/CHANGELOG.md";
+    changelog = "https://github.com/UpCloudLtd/upcloud-python-api/blob/${src.tag}/CHANGELOG.md";
     description = "UpCloud API Client";
     homepage = "https://github.com/UpCloudLtd/upcloud-python-api";
     license = licenses.mit;
diff --git a/pkgs/development/python-modules/uqbar/default.nix b/pkgs/development/python-modules/uqbar/default.nix
index 68eca27e0128..4b19a46863cc 100644
--- a/pkgs/development/python-modules/uqbar/default.nix
+++ b/pkgs/development/python-modules/uqbar/default.nix
@@ -14,14 +14,14 @@
 
 buildPythonPackage rec {
   pname = "uqbar";
-  version = "0.7.4";
+  version = "0.9.5";
   pyproject = true;
 
   disabled = pythonOlder "3.8";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-q4p+ki5wA/gYGWnt2tzCiEakk4fBl9P96ONz2ZxlCCg=";
+    hash = "sha256-MHSnuPiJu2p3NiG/bV6qFUO90xQEFcyQrcxMY0hw8E8=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/uritemplate/default.nix b/pkgs/development/python-modules/uritemplate/default.nix
index 1d757d4134a7..2cf866a315b2 100644
--- a/pkgs/development/python-modules/uritemplate/default.nix
+++ b/pkgs/development/python-modules/uritemplate/default.nix
@@ -9,14 +9,14 @@
 
 buildPythonPackage rec {
   pname = "uritemplate";
-  version = "4.1.1";
+  version = "4.2.0";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Q0bt/Fw7efaUvM1tYJmjIrvrYo2/LNhu6lWkVs5RJPA=";
+    hash = "sha256-SAwu0YCHiVWGMyPuoxsO3maHld4YJhf++cbKCebsnQ4=";
   };
 
   nativeBuildInputs = [ setuptools ];
diff --git a/pkgs/development/python-modules/urllib3/default.nix b/pkgs/development/python-modules/urllib3/default.nix
index 624db352750b..8a98c2c5bd59 100644
--- a/pkgs/development/python-modules/urllib3/default.nix
+++ b/pkgs/development/python-modules/urllib3/default.nix
@@ -24,12 +24,12 @@
 let
   self = buildPythonPackage rec {
     pname = "urllib3";
-    version = "2.4.0";
+    version = "2.5.0";
     pyproject = true;
 
     src = fetchPypi {
       inherit pname version;
-      hash = "sha256-QUvGU1t4f+vXVngEzAFf7jnaq4rYYmjxMQqSUGl95GY=";
+      hash = "sha256-P8R3M8fkGdS8P2s9wrT4kLt0OQajDVa6Slv6S7/5J2A=";
     };
 
     build-system = [
@@ -37,6 +37,11 @@ let
       hatch-vcs
     ];
 
+    postPatch = ''
+      substituteInPlace pyproject.toml \
+        --replace-fail ', "setuptools-scm>=8,<9"' ""
+    '';
+
     optional-dependencies = {
       brotli = if isPyPy then [ brotlicffi ] else [ brotli ];
       socks = [ pysocks ];
diff --git a/pkgs/development/python-modules/urwid/default.nix b/pkgs/development/python-modules/urwid/default.nix
index 2b3f67d2a0d2..464b2609fd7d 100644
--- a/pkgs/development/python-modules/urwid/default.nix
+++ b/pkgs/development/python-modules/urwid/default.nix
@@ -20,7 +20,7 @@
 
 buildPythonPackage rec {
   pname = "urwid";
-  version = "2.6.16";
+  version = "3.0.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -29,7 +29,7 @@ buildPythonPackage rec {
     owner = "urwid";
     repo = "urwid";
     tag = version;
-    hash = "sha256-D5NHtU7XQRh8OqkwrN5r8U/VGF87LGwdnaqGhdjN8AE=";
+    hash = "sha256-pMGNybuJZeCzZRZr0/+N87/z+ZtLmSaWW47MWDirTjQ=";
   };
 
   postPatch = ''
@@ -83,7 +83,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Full-featured console (xterm et al.) user interface library";
-    changelog = "https://github.com/urwid/urwid/releases/tag/${version}";
+    changelog = "https://github.com/urwid/urwid/releases/tag/${src.tag}";
     downloadPage = "https://github.com/urwid/urwid";
     homepage = "https://urwid.org/";
     license = licenses.lgpl21Plus;
diff --git a/pkgs/development/python-modules/urwidtrees/default.nix b/pkgs/development/python-modules/urwidtrees/default.nix
index 3928a034a08c..f9085a6479a4 100644
--- a/pkgs/development/python-modules/urwidtrees/default.nix
+++ b/pkgs/development/python-modules/urwidtrees/default.nix
@@ -9,23 +9,16 @@
 
 buildPythonPackage rec {
   pname = "urwidtrees";
-  version = "1.0.3";
+  version = "1.0.4";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pazz";
     repo = "urwidtrees";
     tag = version;
-    hash = "sha256-yGSjwagCd5TiwEFtF6ZhDuVqj4PTa5pVXhs8ebr2O/g=";
+    hash = "sha256-MQy2b0Q3gTbY8lmmt39Z1Nix0UpQtj+14T/zE1F/YJ4=";
   };
 
-  patches = [
-    (fetchpatch {
-      url = "https://github.com/pazz/urwidtrees/commit/ed39dbc4fc67b0e0249bf108116a88cd18543aa9.patch";
-      hash = "sha256-fA+30d2uVaoNCg4rtoWLNPvrZtq41Co4vcmM80hkURs=";
-    })
-  ];
-
   nativeBuildInputs = [ setuptools ];
 
   propagatedBuildInputs = [ urwid ];
@@ -38,7 +31,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Tree widgets for urwid";
     homepage = "https://github.com/pazz/urwidtrees";
-    changelog = "https://github.com/pazz/urwidtrees/releases/tag/${version}";
+    changelog = "https://github.com/pazz/urwidtrees/releases/tag/${src.tag}";
     license = licenses.gpl3Plus;
     maintainers = [ ];
   };
diff --git a/pkgs/development/python-modules/uuid6/default.nix b/pkgs/development/python-modules/uuid6/default.nix
index 256816442b56..2b0744f3a2cb 100644
--- a/pkgs/development/python-modules/uuid6/default.nix
+++ b/pkgs/development/python-modules/uuid6/default.nix
@@ -7,12 +7,12 @@
 }:
 buildPythonPackage rec {
   pname = "uuid6";
-  version = "2024.7.10";
+  version = "2025.0.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-LSnX9j9ZPKruoODQ3QrYEpycZjsp4ZvfiC6GS+3xj7A=";
+    hash = "sha256-zQr5T6QoZ1pE4yxTGexaNIUiW6IXnu/PTD8gWuMKgb0=";
   };
 
   # https://github.com/oittaa/uuid6-python/blob/e647035428d984452b9906b75bb007198533dfb1/setup.py#L12-L19
diff --git a/pkgs/development/python-modules/uvicorn/default.nix b/pkgs/development/python-modules/uvicorn/default.nix
index cb436823f6ad..ed7eb42839f7 100644
--- a/pkgs/development/python-modules/uvicorn/default.nix
+++ b/pkgs/development/python-modules/uvicorn/default.nix
@@ -18,7 +18,7 @@
 
 buildPythonPackage rec {
   pname = "uvicorn";
-  version = "0.34.2";
+  version = "0.35.0";
   disabled = pythonOlder "3.8";
 
   pyproject = true;
@@ -27,7 +27,7 @@ buildPythonPackage rec {
     owner = "encode";
     repo = "uvicorn";
     tag = version;
-    hash = "sha256-r5G3Z2sMFCs5HlUpVQ05Vip+3MjlSy+3Dkv6FO52uh4=";
+    hash = "sha256-6tuLL0KMggujYI97HSSBHjiLrePwEkxFHjq2HWl8kqE=";
   };
 
   outputs = [
diff --git a/pkgs/development/python-modules/uxsim/default.nix b/pkgs/development/python-modules/uxsim/default.nix
index 345d78df0aeb..6b84988e90d4 100644
--- a/pkgs/development/python-modules/uxsim/default.nix
+++ b/pkgs/development/python-modules/uxsim/default.nix
@@ -8,6 +8,7 @@
   python,
   dill,
   matplotlib,
+  networkx,
   numpy,
   pandas,
   pillow,
@@ -17,26 +18,24 @@
 }:
 buildPythonPackage rec {
   pname = "uxsim";
-  version = "1.7.2";
+  version = "1.8.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "toruseo";
     repo = "UXsim";
     tag = "v${version}";
-    hash = "sha256-5up44edivGWj0nQOOL3+lqjdOBBfxk01nFokG5ht+5Y=";
+    hash = "sha256-aHJ2AAoSm+5viEieAHzhU0EDyS+VQrMWlhm0CkV7/s4=";
   };
 
   patches = [ ./add-qt-plugin-path-to-env.patch ];
 
-  nativeBuildInputs = [
-    setuptools
-    wheel
-  ];
+  build-system = [ setuptools ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     dill
     matplotlib
+    networkx
     numpy
     pandas
     pillow
diff --git a/pkgs/development/python-modules/versioningit/default.nix b/pkgs/development/python-modules/versioningit/default.nix
index 781f10df2ce4..42cf3a141c0d 100644
--- a/pkgs/development/python-modules/versioningit/default.nix
+++ b/pkgs/development/python-modules/versioningit/default.nix
@@ -3,9 +3,9 @@
   buildPythonPackage,
   pythonOlder,
   fetchPypi,
-  importlib-metadata,
   packaging,
   tomli,
+  coverage,
   pytestCheckHook,
   build,
   hatchling,
@@ -19,14 +19,12 @@
 
 buildPythonPackage rec {
   pname = "versioningit";
-  version = "3.1.2";
+  version = "3.3.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Tbg+2Z9WsH2DlAvuNEXKRsoSDRO2swTNtftE5apO3sA=";
+    hash = "sha256-uRrX1z5z0hIg5pVA8gIT8rcpofmzXATp4Tfq8o0iFNo=";
   };
 
   build-system = [ hatchling ];
@@ -34,13 +32,10 @@ buildPythonPackage rec {
   dependencies = [
     packaging
   ]
-  ++ lib.optionals (pythonOlder "3.10") [ importlib-metadata ]
   ++ lib.optionals (pythonOlder "3.11") [ tomli ];
 
-  # AttributeError: type object 'CaseDetails' has no attribute 'model_validate_json'
-  doCheck = lib.versionAtLeast pydantic.version "2";
-
   nativeCheckInputs = [
+    coverage
     pytestCheckHook
     build
     hatchling
@@ -55,6 +50,9 @@ buildPythonPackage rec {
   disabledTests = [
     # wants to write to the Nix store
     "test_editable_mode"
+    # network access
+    "test_install_from_git_url"
+    "test_install_from_zip_url"
   ];
 
   pythonImportsCheck = [ "versioningit" ];
diff --git a/pkgs/development/python-modules/vfblib/default.nix b/pkgs/development/python-modules/vfblib/default.nix
index fd7f6c3ddae5..c32bfe946fec 100644
--- a/pkgs/development/python-modules/vfblib/default.nix
+++ b/pkgs/development/python-modules/vfblib/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "vfblib";
-  version = "0.9.5";
+  version = "0.10.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "LucasFonts";
     repo = "vfbLib";
-    rev = "v${version}";
-    hash = "sha256-nWySeGikbPhZmJ9yLpcFeTNxaG2EmMhTBtZvykrMsBo=";
+    tag = "v${version}";
+    hash = "sha256-lcYk6h2kWFIknCHKkrxdSKab7szvSZhFwmFvkT6VTEo=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/viewstate/default.nix b/pkgs/development/python-modules/viewstate/default.nix
index 9200466e07a3..b42703cb038a 100644
--- a/pkgs/development/python-modules/viewstate/default.nix
+++ b/pkgs/development/python-modules/viewstate/default.nix
@@ -2,23 +2,23 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  poetry-core,
+  setuptools,
   pytestCheckHook,
 }:
 
 buildPythonPackage rec {
   pname = "viewstate";
-  version = "0.6.0";
+  version = "0.7.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "yuvadm";
     repo = "viewstate";
     tag = "v${version}";
-    sha256 = "sha256-cXT5niE3rNdqmNqnITWy9c9/MF0gZ6LU2i1uzfOzkUI=";
+    sha256 = "sha256-fvqz03rKkA2WVVXU74eo0otnuRseE83cv6pw3rMso34=";
   };
 
-  build-system = [ poetry-core ];
+  build-system = [ setuptools ];
 
   nativeCheckInputs = [
     pytestCheckHook
diff --git a/pkgs/development/python-modules/virtualenv/default.nix b/pkgs/development/python-modules/virtualenv/default.nix
index e058d36035cb..5d26d7d54820 100644
--- a/pkgs/development/python-modules/virtualenv/default.nix
+++ b/pkgs/development/python-modules/virtualenv/default.nix
@@ -21,14 +21,14 @@
 
 buildPythonPackage rec {
   pname = "virtualenv";
-  version = "20.31.2";
+  version = "20.33.1";
   format = "pyproject";
 
   disabled = pythonOlder "3.7";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-4QwKnQKDXlklIb5IszK2yu5oh/MywRGqeaCbnnnvwq8=";
+    hash = "sha256-G0RHjZ4mGz+4uqXnSgyjvA4F8hqjYWe/nL+FDlQnZbg=";
   };
 
   nativeBuildInputs = [
@@ -69,9 +69,12 @@ buildPythonPackage rec {
     "test_seed_link_via_app_data"
     # Permission Error
     "test_bad_exe_py_info_no_raise"
+    # https://github.com/pypa/virtualenv/issues/2933
+    # https://github.com/pypa/virtualenv/issues/2939
+    "test_py_info_cache_invalidation_on_py_info_change"
   ]
   ++ lib.optionals (pythonOlder "3.11") [ "test_help" ]
-  ++ lib.optionals (isPyPy) [
+  ++ lib.optionals isPyPy [
     # encoding problems
     "test_bash"
     # permission error
diff --git a/pkgs/development/python-modules/virtualenvwrapper/default.nix b/pkgs/development/python-modules/virtualenvwrapper/default.nix
index 6466e08496f6..000e4c679220 100644
--- a/pkgs/development/python-modules/virtualenvwrapper/default.nix
+++ b/pkgs/development/python-modules/virtualenvwrapper/default.nix
@@ -9,12 +9,14 @@
   virtualenv,
   virtualenv-clone,
   python,
+  setuptools,
+  setuptools-scm,
 }:
 
 buildPythonPackage rec {
   pname = "virtualenvwrapper";
   version = "6.1.1";
-  format = "setuptools";
+  pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
@@ -24,6 +26,11 @@ buildPythonPackage rec {
   # pip depend on $HOME setting
   preConfigure = "export HOME=$TMPDIR";
 
+  build-system = [
+    setuptools
+    setuptools-scm
+  ];
+
   buildInputs = [
     pbr
     pip
@@ -78,7 +85,7 @@ buildPythonPackage rec {
 
   meta = with lib; {
     description = "Enhancements to virtualenv";
-    homepage = "https://pypi.python.org/pypi/virtualenvwrapper";
+    homepage = "https://github.com/python-virtualenvwrapper/virtualenvwrapper";
     license = licenses.mit;
   };
 }
diff --git a/pkgs/development/python-modules/viser/default.nix b/pkgs/development/python-modules/viser/default.nix
index 8ae02805aefb..211c755e1ed7 100644
--- a/pkgs/development/python-modules/viser/default.nix
+++ b/pkgs/development/python-modules/viser/default.nix
@@ -50,14 +50,14 @@
 
 buildPythonPackage rec {
   pname = "viser";
-  version = "1.0.0";
+  version = "1.0.3";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "nerfstudio-project";
     repo = "viser";
     tag = "v${version}";
-    hash = "sha256-itFJ9mlN2VaWbLzQp1ERMxBvXg0O7SMWzEWDdxoTA/0=";
+    hash = "sha256-zufWYq4HvkmbSawTq8G7TheWNpspRL/dptyLuGnUQ2U=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/volvooncall/default.nix b/pkgs/development/python-modules/volvooncall/default.nix
index bb630bbe02ed..deaa8c466f37 100644
--- a/pkgs/development/python-modules/volvooncall/default.nix
+++ b/pkgs/development/python-modules/volvooncall/default.nix
@@ -9,7 +9,7 @@
   fetchpatch,
   geopy,
   mock,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pythonOlder,
 }:
@@ -53,7 +53,7 @@ buildPythonPackage rec {
 
   checkInputs = [
     mock
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ]
   ++ optional-dependencies.mqtt;
diff --git a/pkgs/development/python-modules/wagtail/default.nix b/pkgs/development/python-modules/wagtail/default.nix
index fe49bbaf53a6..18e4aba217eb 100644
--- a/pkgs/development/python-modules/wagtail/default.nix
+++ b/pkgs/development/python-modules/wagtail/default.nix
@@ -31,7 +31,7 @@
 
 buildPythonPackage rec {
   pname = "wagtail";
-  version = "6.4.1";
+  version = "7.1";
   pyproject = true;
 
   # The GitHub source requires some assets to be compiled, which in turn
@@ -39,7 +39,7 @@ buildPythonPackage rec {
   # until https://github.com/wagtail/wagtail/pull/13136 gets merged.
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-zsPm1JIKbRePoetvSvgLNw/dVXDtkkuXkQThV/EMoJc=";
+    hash = "sha256-4d4q+Ctiy/TTt3qTxVd5vGetezF5trT4JOxPIU1XDAE=";
   };
 
   build-system = [
diff --git a/pkgs/development/python-modules/weasyprint/default.nix b/pkgs/development/python-modules/weasyprint/default.nix
index 84f96cdfc1e7..47c6a12e51fb 100644
--- a/pkgs/development/python-modules/weasyprint/default.nix
+++ b/pkgs/development/python-modules/weasyprint/default.nix
@@ -32,7 +32,7 @@
 
 buildPythonPackage rec {
   pname = "weasyprint";
-  version = "65.1";
+  version = "66.0";
   pyproject = true;
 
   __darwinAllowLocalNetworking = true;
@@ -41,7 +41,7 @@ buildPythonPackage rec {
     owner = "Kozea";
     repo = "WeasyPrint";
     tag = "v${version}";
-    hash = "sha256-iSeuRX1dnnrGZbcb1yTxOJPD5kgIWY6oz/0v02QJqSs=";
+    hash = "sha256-wmEDVEbikBpOQ5394IBPWQRjWZOLfMzEGxTtq4tt2Tw=";
   };
 
   patches = [
@@ -108,7 +108,7 @@ buildPythonPackage rec {
   pythonImportsCheck = [ "weasyprint" ];
 
   meta = {
-    changelog = "https://github.com/Kozea/WeasyPrint/releases/tag/v${version}";
+    changelog = "https://github.com/Kozea/WeasyPrint/releases/tag/${src.tag}";
     description = "Converts web documents to PDF";
     mainProgram = "weasyprint";
     homepage = "https://weasyprint.org/";
diff --git a/pkgs/development/python-modules/weatherflow4py/default.nix b/pkgs/development/python-modules/weatherflow4py/default.nix
index 192263120598..627eae7a30a2 100644
--- a/pkgs/development/python-modules/weatherflow4py/default.nix
+++ b/pkgs/development/python-modules/weatherflow4py/default.nix
@@ -52,7 +52,7 @@ buildPythonPackage rec {
   meta = with lib; {
     description = "Module to interact with the WeatherFlow REST API";
     homepage = "https://github.com/jeeftor/weatherflow4py";
-    changelog = "https://github.com/jeeftor/weatherflow4py/releases/tag/v${version}";
+    changelog = "https://github.com/jeeftor/weatherflow4py/releases/tag/${src.tag}";
     license = licenses.mit;
     maintainers = with maintainers; [ fab ];
   };
diff --git a/pkgs/development/python-modules/weaviate-client/default.nix b/pkgs/development/python-modules/weaviate-client/default.nix
index 69fd64c3b8c5..6f94a76e928b 100644
--- a/pkgs/development/python-modules/weaviate-client/default.nix
+++ b/pkgs/development/python-modules/weaviate-client/default.nix
@@ -26,7 +26,7 @@
 
 buildPythonPackage rec {
   pname = "weaviate-client";
-  version = "4.12.0";
+  version = "4.16.5";
   pyproject = true;
 
   disabled = pythonOlder "3.12";
@@ -35,7 +35,7 @@ buildPythonPackage rec {
     owner = "weaviate";
     repo = "weaviate-python-client";
     tag = "v${version}";
-    hash = "sha256-7Mg6d7gbBQfbkxsZI6aGVpfdhBS6MwmK6cl/8koy46k=";
+    hash = "sha256-AjZZ9kmVxePlomX6bXUohZZXl2IXMbrjG00qNlGdjRc=";
   };
 
   pythonRelaxDeps = [
diff --git a/pkgs/development/python-modules/websockets/default.nix b/pkgs/development/python-modules/websockets/default.nix
index 25ff8ada5b62..0a01b25a55c2 100644
--- a/pkgs/development/python-modules/websockets/default.nix
+++ b/pkgs/development/python-modules/websockets/default.nix
@@ -61,7 +61,8 @@ buildPythonPackage rec {
   '';
 
   # Tests fail on Darwin with `OSError: AF_UNIX path too long`
-  doCheck = !stdenv.hostPlatform.isDarwin;
+  # https://github.com/python-websockets/websockets/issues/1648
+  doCheck = pythonOlder "3.13" && !stdenv.hostPlatform.isDarwin;
 
   pythonImportsCheck = [ "websockets" ];
 
diff --git a/pkgs/development/python-modules/webssh/default.nix b/pkgs/development/python-modules/webssh/default.nix
index deb657038054..ae4043556e20 100644
--- a/pkgs/development/python-modules/webssh/default.nix
+++ b/pkgs/development/python-modules/webssh/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "webssh";
-  version = "1.6.2";
+  version = "1.6.3";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-mRestRJukaf7ti3vIs/MM/R+zpGmK551j5HAM2chBsE=";
+    hash = "sha256-K85buvIGrTRZEMfk3IAks8QY5oHJ9f8JjxgCvv924QA=";
   };
 
   patches = [
diff --git a/pkgs/development/python-modules/webtest-aiohttp/default.nix b/pkgs/development/python-modules/webtest-aiohttp/default.nix
index 101a8040cef8..67c513601e53 100644
--- a/pkgs/development/python-modules/webtest-aiohttp/default.nix
+++ b/pkgs/development/python-modules/webtest-aiohttp/default.nix
@@ -5,6 +5,7 @@
   fetchFromGitHub,
   fetchpatch,
   pytest-aiohttp,
+  pytest-asyncio_0,
   pytestCheckHook,
   setuptools,
   webtest,
@@ -44,6 +45,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
+    pytest-asyncio_0
     pytest-aiohttp
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/webtest/default.nix b/pkgs/development/python-modules/webtest/default.nix
index 1759284570c1..9d5773b6c407 100644
--- a/pkgs/development/python-modules/webtest/default.nix
+++ b/pkgs/development/python-modules/webtest/default.nix
@@ -16,14 +16,14 @@
 
 buildPythonPackage rec {
   pname = "webtest";
-  version = "3.0.4";
+  version = "3.0.6";
   pyproject = true;
 
   disabled = pythonOlder "3.6";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-lHeNGaN+Wr1ziNrU2Th0QQ7M7VOhc5qOX/Lby6HPwMQ=";
+    hash = "sha256-Qlb9UkJEj1bFdby5r+J14wWm8HI8SwFDjb3U3VNElEs=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/weconnect/default.nix b/pkgs/development/python-modules/weconnect/default.nix
index c4d08efb46d7..ed1c14c863b5 100644
--- a/pkgs/development/python-modules/weconnect/default.nix
+++ b/pkgs/development/python-modules/weconnect/default.nix
@@ -43,6 +43,8 @@ buildPythonPackage rec {
     requests
   ];
 
+  pythonRelaxDeps = [ "oauthlib" ];
+
   optional-dependencies = {
     Images = [
       ascii-magic
diff --git a/pkgs/development/python-modules/wgpu-py/default.nix b/pkgs/development/python-modules/wgpu-py/default.nix
index e951f5a30933..0760ef3f2270 100644
--- a/pkgs/development/python-modules/wgpu-py/default.nix
+++ b/pkgs/development/python-modules/wgpu-py/default.nix
@@ -38,14 +38,14 @@
 }:
 buildPythonPackage rec {
   pname = "wgpu-py";
-  version = "0.22.2";
+  version = "0.23.0";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "pygfx";
     repo = "wgpu-py";
     tag = "v${version}";
-    hash = "sha256-HGpOEsTj4t57z38qKF6i1oUj7R7aFl8Xgk5y0TtgyMg=";
+    hash = "sha256-z9MRnhPSI+9lGS0UQ5VnSwdCGdYdNnqlDQmb8JAqmyc=";
   };
 
   postPatch =
diff --git a/pkgs/development/python-modules/wheel/default.nix b/pkgs/development/python-modules/wheel/default.nix
index ffed1c4a18e0..1bc96ff57b58 100644
--- a/pkgs/development/python-modules/wheel/default.nix
+++ b/pkgs/development/python-modules/wheel/default.nix
@@ -14,7 +14,7 @@ buildPythonPackage rec {
     owner = "pypa";
     repo = "wheel";
     tag = version;
-    hash = "sha256-tgueGEWByS5owdA5rhXGn3qh1Vtf0HGYC6+BHfrnGAs=";
+    hash = "sha256-iyGfGr3pLVZSEIHetjsPbIIXkuXrmIPiSqqOw31l9Qw=";
   };
 
   nativeBuildInputs = [ flit-core ];
diff --git a/pkgs/development/python-modules/whisperx/default.nix b/pkgs/development/python-modules/whisperx/default.nix
index e08506532d80..72883f63cf76 100644
--- a/pkgs/development/python-modules/whisperx/default.nix
+++ b/pkgs/development/python-modules/whisperx/default.nix
@@ -35,14 +35,14 @@ let
 in
 buildPythonPackage rec {
   pname = "whisperx";
-  version = "3.3.2";
+  version = "3.4.2";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "m-bain";
     repo = "whisperX";
     tag = "v${version}";
-    hash = "sha256-JJa8gUQjIcgJ5lug3ULGkHxkl66qnXkiUA3SwwUVpqk=";
+    hash = "sha256-7MjrtvZGWfgtdQNotzdVMjj0sYfab/6PLQcZCOoqoNM=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/wn/default.nix b/pkgs/development/python-modules/wn/default.nix
index b742ee5902b4..6637038c34a5 100644
--- a/pkgs/development/python-modules/wn/default.nix
+++ b/pkgs/development/python-modules/wn/default.nix
@@ -11,14 +11,14 @@
 
 buildPythonPackage rec {
   pname = "wn";
-  version = "0.11.0";
+  version = "0.13.0";
   pyproject = true;
 
   disabled = pythonOlder "3.9";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-TDvTNh+5cxgBoy9nuXItHOdtfbsP+3F16egZjUBSpak=";
+    hash = "sha256-wOaFLlFCNUo7RWWiMXRuztyVJTXpJtPvZJi9d6UmkcY=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/wrf-python/default.nix b/pkgs/development/python-modules/wrf-python/default.nix
index 0bac9b4da09e..ce8dfd259aab 100644
--- a/pkgs/development/python-modules/wrf-python/default.nix
+++ b/pkgs/development/python-modules/wrf-python/default.nix
@@ -15,7 +15,7 @@
 
 buildPythonPackage rec {
   pname = "wrf-python";
-  version = "1.3.4.1";
+  version = "1.4.0";
   format = "setuptools";
 
   disabled = pythonOlder "3.7";
@@ -24,7 +24,7 @@ buildPythonPackage rec {
     owner = "NCAR";
     repo = "wrf-python";
     tag = "v${version}";
-    hash = "sha256-4iIs/M9fzGJsnKCDSl09OTUoh7j6REBXuutE5uXFe3k=";
+    hash = "sha256-LvNorZ28j/O8fs9z6jhYWC8RcCDIwh7k5iR9iumCvnQ=";
   };
 
   nativeBuildInputs = [ gfortran ];
diff --git a/pkgs/development/python-modules/x-transformers/default.nix b/pkgs/development/python-modules/x-transformers/default.nix
index ffdc30857b50..9aae527a124d 100644
--- a/pkgs/development/python-modules/x-transformers/default.nix
+++ b/pkgs/development/python-modules/x-transformers/default.nix
@@ -19,14 +19,14 @@
 
 buildPythonPackage rec {
   pname = "x-transformers";
-  version = "2.5.6";
+  version = "2.6.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "lucidrains";
     repo = "x-transformers";
     tag = version;
-    hash = "sha256-9PUOPcTm2xvtKV4T2lAGu/3BiQZzSlwo43i0x1gbrAM=";
+    hash = "sha256-UDZBN/k1VDnfxv1t4EpvXJ6rfC0XgGCWSFBaCGN43E0=";
   };
 
   build-system = [ hatchling ];
diff --git a/pkgs/development/python-modules/xarray/default.nix b/pkgs/development/python-modules/xarray/default.nix
index b089e18cb966..012d46b52a06 100644
--- a/pkgs/development/python-modules/xarray/default.nix
+++ b/pkgs/development/python-modules/xarray/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "xarray";
-  version = "2025.04.0";
+  version = "2025.07.1";
   pyproject = true;
 
   disabled = pythonOlder "3.10";
@@ -22,7 +22,7 @@ buildPythonPackage rec {
     owner = "pydata";
     repo = "xarray";
     tag = "v${version}";
-    hash = "sha256-HEad3+JvLeBl4/vUFzTTdHz3Y4QjwvnycVkb9gV/8Qk=";
+    hash = "sha256-UvBRGYZFkjxUYT+S4By+7xQZW6h0usQ26iFeJvWcxo0=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/xbox-webapi/default.nix b/pkgs/development/python-modules/xbox-webapi/default.nix
index 07aabe725302..53932099f0dc 100644
--- a/pkgs/development/python-modules/xbox-webapi/default.nix
+++ b/pkgs/development/python-modules/xbox-webapi/default.nix
@@ -9,7 +9,7 @@
   httpx,
   ms-cv,
   pydantic,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   respx,
 }:
@@ -19,8 +19,6 @@ buildPythonPackage rec {
   version = "2.1.0";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchFromGitHub {
     owner = "OpenXbox";
     repo = "xbox-webapi-python";
@@ -28,9 +26,9 @@ buildPythonPackage rec {
     hash = "sha256-9A3gdSlRjBCx5fBW+jkaSWsFuGieXQKvbEbZzGzLf94=";
   };
 
-  nativeBuildInputs = [ setuptools ];
+  build-system = [ setuptools ];
 
-  propagatedBuildInputs = [
+  dependencies = [
     appdirs
     ecdsa
     httpx
@@ -39,7 +37,7 @@ buildPythonPackage rec {
   ];
 
   nativeCheckInputs = [
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
     respx
   ];
diff --git a/pkgs/development/python-modules/xgrammar/default.nix b/pkgs/development/python-modules/xgrammar/default.nix
index 66022da38e27..9f653da2d179 100644
--- a/pkgs/development/python-modules/xgrammar/default.nix
+++ b/pkgs/development/python-modules/xgrammar/default.nix
@@ -25,7 +25,7 @@
 
 buildPythonPackage rec {
   pname = "xgrammar";
-  version = "0.1.19";
+  version = "0.1.22";
   pyproject = true;
 
   src = fetchFromGitHub {
@@ -33,7 +33,7 @@ buildPythonPackage rec {
     repo = "xgrammar";
     tag = "v${version}";
     fetchSubmodules = true;
-    hash = "sha256-0b2tJx1D/2X/uosbthHfevUpTCBtuSKNlxOKyidTotA=";
+    hash = "sha256-mz6eabETkAzDoPjXE5VJvgrR1vnXXmx3JO4xZRH4TRQ=";
   };
 
   patches = [
@@ -92,7 +92,7 @@ buildPythonPackage rec {
   meta = {
     description = "Efficient, Flexible and Portable Structured Generation";
     homepage = "https://xgrammar.mlc.ai";
-    changelog = "https://github.com/mlc-ai/xgrammar/releases/tag/v${version}";
+    changelog = "https://github.com/mlc-ai/xgrammar/releases/tag/${src.tag}";
     license = lib.licenses.asl20;
   };
 }
diff --git a/pkgs/development/python-modules/xknx/default.nix b/pkgs/development/python-modules/xknx/default.nix
index 6c8692ccf9b1..26947d8b5d6b 100644
--- a/pkgs/development/python-modules/xknx/default.nix
+++ b/pkgs/development/python-modules/xknx/default.nix
@@ -6,7 +6,7 @@
   cryptography,
   ifaddr,
   freezegun,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytestCheckHook,
   pythonOlder,
   setuptools,
@@ -36,7 +36,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     freezegun
-    pytest-asyncio
+    pytest-asyncio_0
     pytestCheckHook
   ];
 
diff --git a/pkgs/development/python-modules/xmldiff/default.nix b/pkgs/development/python-modules/xmldiff/default.nix
index 868341a8cfac..fd0c85cffd26 100644
--- a/pkgs/development/python-modules/xmldiff/default.nix
+++ b/pkgs/development/python-modules/xmldiff/default.nix
@@ -29,6 +29,11 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [ pytestCheckHook ];
 
+  disabledTests = [
+    # lxml 6.0 compat issue
+    "test_api_diff_texts"
+  ];
+
   pythonImportsCheck = [ "xmldiff" ];
 
   meta = {
diff --git a/pkgs/development/python-modules/xmlschema/default.nix b/pkgs/development/python-modules/xmlschema/default.nix
index 9e27d760c19e..be3f1ecb12ec 100644
--- a/pkgs/development/python-modules/xmlschema/default.nix
+++ b/pkgs/development/python-modules/xmlschema/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "xmlschema";
-  version = "4.0.1";
+  version = "4.1.0";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "sissaschool";
     repo = "xmlschema";
     tag = "v${version}";
-    hash = "sha256-J2A1dBLo5LtO1ldRuopfTjaew38B27D4wE+y387bQvs=";
+    hash = "sha256-3nvl49rlwQpNARmWBSw+faL+yNGqNecokjGGpnaC8a0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/xmlsec/default.nix b/pkgs/development/python-modules/xmlsec/default.nix
index 7df8431b77ce..159500e51baf 100644
--- a/pkgs/development/python-modules/xmlsec/default.nix
+++ b/pkgs/development/python-modules/xmlsec/default.nix
@@ -16,12 +16,12 @@
 
 buildPythonPackage rec {
   pname = "xmlsec";
-  version = "1.3.15";
+  version = "1.3.16";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-uqhWuD0AEuJ45vbL7JasgSjeZnyp+pou6wLHUugW9tg=";
+    hash = "sha256-K2xwVExtHUygBqqjFJWODvNRTcgf/94bI/LsQaV5H50=";
   };
 
   build-system = [ setuptools-scm ];
diff --git a/pkgs/development/python-modules/xvfbwrapper/default.nix b/pkgs/development/python-modules/xvfbwrapper/default.nix
index 2b7e7d63cb53..966e4f18b4be 100644
--- a/pkgs/development/python-modules/xvfbwrapper/default.nix
+++ b/pkgs/development/python-modules/xvfbwrapper/default.nix
@@ -8,12 +8,12 @@
 
 buildPythonPackage rec {
   pname = "xvfbwrapper";
-  version = "0.2.10";
+  version = "0.2.13";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "sha256-1mLPjyZu/T0KHAIu67jSwECD1uh/2BOS+1QA2VA27Yw=";
+    sha256 = "sha256-ouR2yaTxlzf+Ky0LgB5m8P9wH9oz2YakvzTdxBR1QQI=";
   };
   propagatedBuildInputs = [ xorg.xvfb ];
 
diff --git a/pkgs/development/python-modules/xyzservices/default.nix b/pkgs/development/python-modules/xyzservices/default.nix
index 347e5f0b6296..c96c0c65d028 100644
--- a/pkgs/development/python-modules/xyzservices/default.nix
+++ b/pkgs/development/python-modules/xyzservices/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "xyzservices";
-  version = "2025.1.0";
+  version = "2025.4.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-XNuwkHwgvhvgZsbi3GnGRYQtEROk6D5kIGVgSiHyVLo=";
+    hash = "sha256-b+dkcTZI+sU0UPvGGjw2bLauUzWhsq4MN5a0ld43Cdg=";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/development/python-modules/yangson/default.nix b/pkgs/development/python-modules/yangson/default.nix
index 2e82d5c33962..5705ef4dc312 100644
--- a/pkgs/development/python-modules/yangson/default.nix
+++ b/pkgs/development/python-modules/yangson/default.nix
@@ -27,6 +27,8 @@ buildPythonPackage rec {
     pyyaml
   ];
 
+  pythonRelaxDeps = [ "elementpath" ];
+
   nativeCheckInputs = [ pytestCheckHook ];
 
   pythonImportsCheck = [ "yangson" ];
diff --git a/pkgs/development/python-modules/yarl/default.nix b/pkgs/development/python-modules/yarl/default.nix
index 5805d35482d1..36184650fcb9 100644
--- a/pkgs/development/python-modules/yarl/default.nix
+++ b/pkgs/development/python-modules/yarl/default.nix
@@ -2,7 +2,7 @@
   lib,
   buildPythonPackage,
   fetchFromGitHub,
-  cython_3_1,
+  cython,
   expandvars,
   setuptools,
   idna,
@@ -28,7 +28,7 @@ buildPythonPackage rec {
   };
 
   build-system = [
-    cython_3_1
+    cython
     expandvars
     setuptools
   ];
diff --git a/pkgs/development/python-modules/youseedee/0001-use-packaged-unicode-data.patch b/pkgs/development/python-modules/youseedee/0001-use-packaged-unicode-data.patch
index a1bc6fd92cc6..88a2e10b7096 100644
--- a/pkgs/development/python-modules/youseedee/0001-use-packaged-unicode-data.patch
+++ b/pkgs/development/python-modules/youseedee/0001-use-packaged-unicode-data.patch
@@ -1,33 +1,26 @@
 diff --git a/lib/youseedee/__init__.py b/lib/youseedee/__init__.py
-index 8db9c5f..9ad6618 100644
+index 5e73ef8..2cdbdd0 100644
 --- a/lib/youseedee/__init__.py
 +++ b/lib/youseedee/__init__.py
-@@ -38,12 +38,7 @@ UCD_URL = "https://unicode.org/Public/UCD/latest/ucd/UCD.zip"
+@@ -38,19 +38,12 @@ UCD_URL = "https://unicode.org/Public/UCD/latest/ucd/UCD.zip"
  
  def ucd_dir():
      """Return the directory where Unicode data is stored"""
--    ucddir = expanduser("~/.youseedee")
--    try:
--        os.mkdir(ucddir)
--    except FileExistsError:
--        pass
--    return ucddir
-+    return "@ucd_dir@"
+-    return Path(platformdirs.user_cache_dir("youseedee", ensure_exists=True))
++    return Path("@ucd_dir@")
  
  
- def up_to_date():
-@@ -65,14 +60,6 @@ def up_to_date():
- 
  def ensure_files():
      """Ensure the Unicode data files are downloaded and up to date, and download them if not"""
--    if not os.path.isfile(os.path.join(ucd_dir(), "UnicodeData.txt")):
--        download_files()
--    if not up_to_date():
--        # Remove the zip if it exists
--        zip_path = os.path.join(ucd_dir(), "UCD.zip")
--        if os.path.isfile(zip_path):
--            os.unlink(zip_path)
--        download_files()
-     return
+-    file_lock = FileLock(ucd_dir() / ".youseedee_ensure_files.lock")
+-    with file_lock:
+-        if not (ucd_dir() / "UnicodeData.txt").is_file():
+-            _download_files()
+-        if not _up_to_date():
+-            # Remove the zip if it exists
+-            (ucd_dir() / "UCD.zip").unlink(missing_ok=True)
+-            _download_files()
++    return
  
  
+ def _up_to_date():
diff --git a/pkgs/development/python-modules/youseedee/default.nix b/pkgs/development/python-modules/youseedee/default.nix
index 6117e329d62a..26b2bfe877be 100644
--- a/pkgs/development/python-modules/youseedee/default.nix
+++ b/pkgs/development/python-modules/youseedee/default.nix
@@ -7,17 +7,18 @@
   setuptools-scm,
   filelock,
   requests,
+  platformdirs,
   unicode-character-database,
 }:
 
 buildPythonPackage rec {
   pname = "youseedee";
-  version = "0.6.0";
+  version = "0.7.0";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-9w6yr28zq0LgOvMp5fCFaHGOwK4wbbDo/g1jH4Uky0E=";
+    hash = "sha256-b5gxBIr/mowzlG4/N0C22S1XTq0NAGTq1/+iMUfxD18=";
   };
 
   patches = [
@@ -36,6 +37,7 @@ buildPythonPackage rec {
   dependencies = [
     filelock
     requests
+    platformdirs
   ];
 
   # Package has no unit tests, but we can check an example as per README.rst:
diff --git a/pkgs/development/python-modules/youtube-transcript-api/default.nix b/pkgs/development/python-modules/youtube-transcript-api/default.nix
index 4942bd2492bc..fe35393e7f92 100644
--- a/pkgs/development/python-modules/youtube-transcript-api/default.nix
+++ b/pkgs/development/python-modules/youtube-transcript-api/default.nix
@@ -12,7 +12,7 @@
 
 buildPythonPackage rec {
   pname = "youtube-transcript-api";
-  version = "1.0.3";
+  version = "1.2.2";
   pyproject = true;
 
   disabled = pythonOlder "3.7";
@@ -21,7 +21,7 @@ buildPythonPackage rec {
     owner = "jdepoix";
     repo = "youtube-transcript-api";
     tag = "v${version}";
-    hash = "sha256-MDa19rI5DaIzrrEt7uNQ5+xSFkRXI5iwt/u5UNvT1f4=";
+    hash = "sha256-nr8WeegMv7zSqlzcLSG224O9fRXA6jIlYQN4vV6lW24=";
   };
 
   build-system = [ poetry-core ];
@@ -40,6 +40,18 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  preCheck = ''
+    export PATH=$out/bin:$PATH
+  '';
+
+  disabledTests = [
+    # network access
+    "test_fetch__create_consent_cookie_if_needed"
+    "test_fetch__with_generic_proxy_reraise_when_blocked"
+    "test_fetch__with_proxy_retry_when_blocked"
+    "test_fetch__with_webshare_proxy_reraise_when_blocked"
+  ];
+
   pythonImportsCheck = [ "youtube_transcript_api" ];
 
   meta = with lib; {
diff --git a/pkgs/development/python-modules/z3c-checkversions/default.nix b/pkgs/development/python-modules/z3c-checkversions/default.nix
index 400d22584451..838192b4b258 100644
--- a/pkgs/development/python-modules/z3c-checkversions/default.nix
+++ b/pkgs/development/python-modules/z3c-checkversions/default.nix
@@ -10,7 +10,7 @@
 
 buildPythonPackage rec {
   pname = "z3c-checkversions";
-  version = "2.1";
+  version = "3.0";
   format = "setuptools";
 
   # distutils usage
@@ -19,7 +19,7 @@ buildPythonPackage rec {
   src = fetchPypi {
     inherit version;
     pname = "z3c.checkversions";
-    hash = "sha256-j5So40SyJf7XfCz3P9YFR/6z94up3LY2/dfEmmIbxAk=";
+    hash = "sha256-VMGSlocgEddBrUT0A4ihtCdhSbirWYe9FmQ0QyOGOEs=";
   };
 
   propagatedBuildInputs = [ zc-buildout ];
diff --git a/pkgs/development/python-modules/zarr/default.nix b/pkgs/development/python-modules/zarr/default.nix
index a203a9b2254c..755d64cc780d 100644
--- a/pkgs/development/python-modules/zarr/default.nix
+++ b/pkgs/development/python-modules/zarr/default.nix
@@ -2,47 +2,61 @@
   lib,
   buildPythonPackage,
   fetchPypi,
-  pythonOlder,
 
   # build-system
-  setuptools-scm,
+  hatchling,
+  hatch-vcs,
 
   # dependencies
-  asciitree,
+  donfig,
   numpy,
-  fasteners,
   numcodecs,
+  packaging,
+  typing-extensions,
 
   # tests
+  hypothesis,
+  pytest-asyncio,
+  pytest-xdist,
   pytestCheckHook,
+  tomlkit,
 }:
 
 buildPythonPackage rec {
   pname = "zarr";
-  version = "2.18.7";
+  version = "3.1.1";
   pyproject = true;
 
-  disabled = pythonOlder "3.8";
-
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-srj2bxTaxK9msYDSM4gZmBuYH3Dhlsmmbmv6qeWVcvU=";
+    hash = "sha256-F9ty838kiUUtITesiRxBM7j5dvkYnY79PnXzs63YTow=";
   };
 
   build-system = [
-    setuptools-scm
+    hatchling
+    hatch-vcs
   ];
 
   dependencies = [
-    asciitree
-    numpy
-    fasteners
+    donfig
     numcodecs
+    numpy
+    packaging
+    typing-extensions
   ]
-  ++ numcodecs.optional-dependencies.msgpack;
+  ++ numcodecs.optional-dependencies.crc32c;
 
   nativeCheckInputs = [
+    hypothesis
+    pytest-asyncio
+    pytest-xdist
     pytestCheckHook
+    tomlkit
+  ];
+
+  disabledTestPaths = [
+    # requires uv and then fails at setting up python envs
+    "tests/test_examples.py"
   ];
 
   pythonImportsCheck = [ "zarr" ];
diff --git a/pkgs/development/python-modules/zdaemon/default.nix b/pkgs/development/python-modules/zdaemon/default.nix
index 58b4fccde1e7..5501429c8367 100644
--- a/pkgs/development/python-modules/zdaemon/default.nix
+++ b/pkgs/development/python-modules/zdaemon/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "zdaemon";
-  version = "5.1";
+  version = "5.2.1";
   pyproject = true;
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-Iun+UFDq67ngPZrWTk9jzNheBMOP2zUc8RO+9vaNt6Q=";
+    hash = "sha256-8GwsfK9RnHYINPj+JuVzWVDVAX9y1cII3IsZABQFlM0=";
   };
 
   build-system = [ setuptools ];
diff --git a/pkgs/development/python-modules/zha/default.nix b/pkgs/development/python-modules/zha/default.nix
index 4ce4ac77d040..196c5cc377fc 100644
--- a/pkgs/development/python-modules/zha/default.nix
+++ b/pkgs/development/python-modules/zha/default.nix
@@ -8,7 +8,7 @@
   pyserial,
   pyserial-asyncio,
   pyserial-asyncio-fast,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-timeout,
   pytest-xdist,
   pytestCheckHook,
@@ -68,7 +68,7 @@ buildPythonPackage rec {
 
   nativeCheckInputs = [
     freezegun
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-timeout
     pytest-xdist
     pytestCheckHook
diff --git a/pkgs/development/python-modules/zigpy/default.nix b/pkgs/development/python-modules/zigpy/default.nix
index 2dc40f5b3d7a..073565b0b0c3 100644
--- a/pkgs/development/python-modules/zigpy/default.nix
+++ b/pkgs/development/python-modules/zigpy/default.nix
@@ -14,7 +14,7 @@
   frozendict,
   jsonschema,
   pyserial-asyncio,
-  pytest-asyncio,
+  pytest-asyncio_0,
   pytest-timeout,
   pytestCheckHook,
   pythonOlder,
@@ -60,7 +60,7 @@ buildPythonPackage rec {
   nativeCheckInputs = [
     aioresponses
     freezegun
-    pytest-asyncio
+    pytest-asyncio_0
     pytest-timeout
     pytestCheckHook
   ];
diff --git a/pkgs/development/python-modules/zimports/default.nix b/pkgs/development/python-modules/zimports/default.nix
index f5d50241a881..4d1a4f1902c4 100644
--- a/pkgs/development/python-modules/zimports/default.nix
+++ b/pkgs/development/python-modules/zimports/default.nix
@@ -13,7 +13,7 @@
 
 buildPythonPackage rec {
   pname = "zimports";
-  version = "0.6.1";
+  version = "0.6.2";
   format = "setuptools";
 
   # upstream technically support 3.7 through 3.9, but 3.10 happens to work while 3.11 breaks with an import error
@@ -22,8 +22,8 @@ buildPythonPackage rec {
   src = fetchFromGitHub {
     owner = "sqlalchemyorg";
     repo = "zimports";
-    rev = "refs/tags/v${version}";
-    hash = "sha256-+sDvl8z0O0cZyS1oZgt924hlOkYeHiStpXL9y9+JZ5I=";
+    tag = "v${version}";
+    hash = "sha256-yI/ZTNqVIu76xivXJ+MoLpPupf0RQjQOnP6OWMPajBo=";
   };
 
   propagatedBuildInputs = [
diff --git a/pkgs/development/python-modules/zipp/default.nix b/pkgs/development/python-modules/zipp/default.nix
index d7b11ad7a8ab..f7c9a5ad3149 100644
--- a/pkgs/development/python-modules/zipp/default.nix
+++ b/pkgs/development/python-modules/zipp/default.nix
@@ -1,27 +1,35 @@
 {
   lib,
   buildPythonPackage,
-  fetchPypi,
+  fetchFromGitHub,
   func-timeout,
   jaraco-itertools,
-  pythonOlder,
+  setuptools,
   setuptools-scm,
 }:
 
 let
   zipp = buildPythonPackage rec {
     pname = "zipp";
-    version = "3.21.0";
-    format = "pyproject";
+    version = "3.23.0";
+    pyproject = true;
 
-    disabled = pythonOlder "3.7";
-
-    src = fetchPypi {
-      inherit pname version;
-      hash = "sha256-LJlY9kMKIEA0GlLrYI7W3ZPvQ5LgL/4hlBfBsotd0fQ=";
+    src = fetchFromGitHub {
+      owner = "jaraco";
+      repo = "zipp";
+      tag = "v${version}";
+      hash = "sha256-iao7Aco1Ktvyt1uQCD/le4tAdyVpxfKPi3TRT12YHuU=";
     };
 
-    nativeBuildInputs = [ setuptools-scm ];
+    postPatch = ''
+      # Downloads license text at build time
+      sed -i "/coherent\.licensed/d" pyproject.toml
+    '';
+
+    build-system = [
+      setuptools
+      setuptools-scm
+    ];
 
     # Prevent infinite recursion with pytest
     doCheck = false;
diff --git a/pkgs/development/python-modules/zstd/default.nix b/pkgs/development/python-modules/zstd/default.nix
index fd1333d09201..32b453396b34 100644
--- a/pkgs/development/python-modules/zstd/default.nix
+++ b/pkgs/development/python-modules/zstd/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "zstd";
-  version = "1.5.6.6";
+  version = "1.5.7.2";
   format = "setuptools";
 
   src = fetchPypi {
     inherit pname version;
-    hash = "sha256-gixLZXXc0waR695lRUJbUcFOwbLlGfaE70sNBhaSEIg=";
+    hash = "sha256-bYaExpAJvknhsY7CUaXrDX4k+TYkmQqKEkodpmqS/Io=";
   };
 
   postPatch = ''
diff --git a/pkgs/development/tools/devpi-server/default.nix b/pkgs/development/tools/devpi-server/default.nix
index 9e52be186a3e..9cb67f2871c0 100644
--- a/pkgs/development/tools/devpi-server/default.nix
+++ b/pkgs/development/tools/devpi-server/default.nix
@@ -19,6 +19,7 @@
   py,
   httpx,
   pyramid,
+  pytest-asyncio,
   pytestCheckHook,
   repoze-lru,
   setuptools,
@@ -80,6 +81,7 @@ buildPythonApplication rec {
     beautifulsoup4
     nginx
     py
+    pytest-asyncio
     pytestCheckHook
     webtest
   ];
diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix
index 94742e065ab4..a01951846239 100644
--- a/pkgs/servers/home-assistant/default.nix
+++ b/pkgs/servers/home-assistant/default.nix
@@ -138,6 +138,18 @@ let
         ];
       });
 
+      hassil = super.hassil.overridePythonAttrs (oldAttrs: rec {
+        version = "2.2.3";
+
+        src = fetchFromGitHub {
+          inherit (oldAttrs.src) repo owner;
+          tag = "v${version}";
+          hash = "sha256-rP7F0BovD0Klf06lywo+1uFhPf+dS0qbNBZluun8+cE=";
+        };
+
+        disabledTestPaths = [ ];
+      });
+
       mcp = super.mcp.overridePythonAttrs (oldAttrs: rec {
         version = "1.5.0";
         src = fetchFromGitHub {
diff --git a/pkgs/servers/mail/mailman/python.nix b/pkgs/servers/mail/mailman/python.nix
index 397362bd2e51..ffa3b18ea88b 100644
--- a/pkgs/servers/mail/mailman/python.nix
+++ b/pkgs/servers/mail/mailman/python.nix
@@ -36,19 +36,7 @@ lib.fix (
                 tag = new.version;
                 hash = "sha256-13/QbA//wyHE9yMB7Jy/sJEyqPKxiMN+CZwSc4U6okU=";
               };
-            }
-          );
-
-          # the redis python library only supports hiredis 3+ from version 5.1.0 onwards
-          hiredis = super.hiredis.overrideAttrs (
-            new:
-            { src, ... }:
-            {
-              version = "3.1.0";
-              src = src.override {
-                tag = new.version;
-                hash = "sha256-ID5OJdARd2N2GYEpcYOpxenpZlhWnWr5fAClAgqEgGg=";
-              };
+              patches = [ ];
             }
           );
         })
diff --git a/pkgs/top-level/python-aliases.nix b/pkgs/top-level/python-aliases.nix
index 63fc54d115f8..788cfb18a309 100644
--- a/pkgs/top-level/python-aliases.nix
+++ b/pkgs/top-level/python-aliases.nix
@@ -326,6 +326,7 @@ mapAliases ({
   hcs_utils = hcs-utils; # added 2024-01-06
   hdlparse = throw "hdlparse has been removed, it was using setuptools 2to3 translation feature, which has been removed in setuptools 58"; # added 2022-01-18
   hglib = python-hglib; # added 2023-10-13
+  hijri-converter = hijridate; # added 2025-08-07
   hkdf = throw "hkdf has been removed, as it is no longer maintained upstream."; # added 2024-10-04
   homeassistant-bring-api = bring-api; # added 2024-04-11
   homeassistant-pyozw = throw "homeassistant-pyozw has been removed, as it was packaged for home-assistant which has removed it as a dependency."; # added 2024-01-05
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 6f5f7ded17ae..9d17e9b00f43 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -3222,16 +3222,6 @@ self: super: with self; {
 
   cython_0 = callPackage ../development/python-modules/cython/0.nix { };
 
-  cython_3_1 = cython.overridePythonAttrs rec {
-    version = "3.1.2";
-    src = pkgs.fetchFromGitHub {
-      owner = "cython";
-      repo = "cython";
-      tag = version;
-      hash = "sha256-lP8ILCzAZuoPzFhCqGXwIpifN8XoWz93SJ7c3XVe69Y=";
-    };
-  };
-
   cytoolz = callPackage ../development/python-modules/cytoolz { };
 
   dacite = callPackage ../development/python-modules/dacite { };
@@ -3399,6 +3389,8 @@ self: super: with self; {
 
   dbt-postgres = callPackage ../development/python-modules/dbt-postgres { };
 
+  dbt-protos = callPackage ../development/python-modules/dbt-protos { };
+
   dbt-redshift = callPackage ../development/python-modules/dbt-redshift { };
 
   dbt-semantic-interfaces = callPackage ../development/python-modules/dbt-semantic-interfaces { };
@@ -3535,6 +3527,8 @@ self: super: with self; {
 
   dep-logic = callPackage ../development/python-modules/dep-logic { };
 
+  dependency-groups = callPackage ../development/python-modules/dependency-groups { };
+
   dependency-injector = callPackage ../development/python-modules/dependency-injector { };
 
   deploykit = callPackage ../development/python-modules/deploykit { };
@@ -5049,9 +5043,7 @@ self: super: with self; {
 
   feedgen = callPackage ../development/python-modules/feedgen { };
 
-  feedgenerator = callPackage ../development/python-modules/feedgenerator {
-    inherit (pkgs) glibcLocales;
-  };
+  feedgenerator = callPackage ../development/python-modules/feedgenerator { };
 
   feedparser = callPackage ../development/python-modules/feedparser { };
 
@@ -5079,8 +5071,6 @@ self: super: with self; {
 
   fido2 = callPackage ../development/python-modules/fido2 { };
 
-  fido2_2 = callPackage ../development/python-modules/fido2/2.nix { };
-
   fields = callPackage ../development/python-modules/fields { };
 
   file-read-backwards = callPackage ../development/python-modules/file-read-backwards { };
@@ -6558,7 +6548,7 @@ self: super: with self; {
 
   hightime = callPackage ../development/python-modules/hightime { };
 
-  hijri-converter = callPackage ../development/python-modules/hijri-converter { };
+  hijridate = callPackage ../development/python-modules/hijridate { };
 
   hikari = callPackage ../development/python-modules/hikari { };
 
@@ -14149,6 +14139,8 @@ self: super: with self; {
     callPackage ../development/python-modules/pytest-asyncio-cooperative
       { };
 
+  pytest-asyncio_0 = callPackage ../development/python-modules/pytest-asyncio/0.nix { };
+
   pytest-asyncio_0_21 = pytest-asyncio.overridePythonAttrs (old: rec {
     version = "0.21.2";
     src = pkgs.fetchFromGitHub {
@@ -14431,8 +14423,12 @@ self: super: with self; {
 
   pytest7CheckHook = pytestCheckHook.override { pytest = pytest_7; };
 
+  pytest8_3CheckHook = pytestCheckHook.override { pytest = pytest_8_3; };
+
   pytest_7 = callPackage ../development/python-modules/pytest/7.nix { };
 
+  pytest_8_3 = callPackage ../development/python-modules/pytest/8_3.nix { };
+
   pytestcache = callPackage ../development/python-modules/pytestcache { };
 
   python-aodhclient = callPackage ../development/python-modules/python-aodhclient { };
@@ -15016,7 +15012,9 @@ self: super: with self; {
 
   pytweening = callPackage ../development/python-modules/pytweening { };
 
-  pytz = callPackage ../development/python-modules/pytz { };
+  pytz = callPackage ../development/python-modules/pytz {
+    inherit (pkgs) tzdata;
+  };
 
   pytz-deprecation-shim = callPackage ../development/python-modules/pytz-deprecation-shim { };
 
@@ -15685,6 +15683,8 @@ self: super: with self; {
 
   rfc3987 = callPackage ../development/python-modules/rfc3987 { };
 
+  rfc3987-syntax = callPackage ../development/python-modules/rfc3987-syntax { };
+
   rfc6555 = callPackage ../development/python-modules/rfc6555 { };
 
   rfc7464 = callPackage ../development/python-modules/rfc7464 { };