diff --git a/pkgs/by-name/sh/shopify-cli/manifests/package-lock.json b/pkgs/by-name/sh/shopify-cli/manifests/package-lock.json
deleted file mode 100644
index bc1343d314c1..000000000000
--- a/pkgs/by-name/sh/shopify-cli/manifests/package-lock.json
+++ /dev/null
@@ -1,896 +0,0 @@
-{
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diff --git a/pkgs/by-name/sh/shopify-cli/manifests/package.json b/pkgs/by-name/sh/shopify-cli/manifests/package.json
deleted file mode 100644
index 8093f53a20c1..000000000000
--- a/pkgs/by-name/sh/shopify-cli/manifests/package.json
+++ /dev/null
@@ -1,11 +0,0 @@
-{
-  "name": "shopify",
-  "version": "3.86.1",
-  "private": true,
-  "bin": {
-    "shopify": "node_modules/@shopify/cli/bin/run.js"
-  },
-  "dependencies": {
-    "@shopify/cli": "3.86.1"
-  }
-}
diff --git a/pkgs/by-name/sh/shopify-cli/package.nix b/pkgs/by-name/sh/shopify-cli/package.nix
index 0e2385cf5264..dc3ed41f84bd 100644
--- a/pkgs/by-name/sh/shopify-cli/package.nix
+++ b/pkgs/by-name/sh/shopify-cli/package.nix
@@ -1,39 +1,85 @@
 {
-  buildNpmPackage,
   lib,
-  testers,
-  shopify-cli,
+  stdenv,
+  fetchFromGitHub,
+  pnpm,
+  faketty,
+  nodejs,
+  versionCheckHook,
+  makeBinaryWrapper,
+  nix-update-script,
 }:
-let
-  version = "3.86.1";
-in
-buildNpmPackage {
+stdenv.mkDerivation (finalAttrs: {
   pname = "shopify";
-  version = version;
+  version = "3.86.1";
 
-  src = ./manifests;
-
-  npmDepsHash = "sha256-GAE4zfSqk7oM2ecojPC4REFGRdRwvqCnA9L2L7LMIfQ=";
-  dontNpmBuild = true;
-
-  passthru = {
-    updateScript = ./update.sh;
-    tests.version = testers.testVersion {
-      package = shopify-cli;
-      command = "shopify version";
-    };
+  src = fetchFromGitHub {
+    owner = "shopify";
+    repo = "cli";
+    tag = finalAttrs.version;
+    hash = "sha256-wEddzW5/+qdtNTxdUs7YEA5vk6/KjrVOgWvIeo0o2ww=";
   };
 
+  pnpmDeps = pnpm.fetchDeps {
+    inherit (finalAttrs) pname version src;
+    fetcherVersion = 2;
+    hash = "sha256-JhyZpkrp78FECH6UKYYuhWF2w/mYW1BQG5FIsWh5GRE=";
+  };
+
+  nativeBuildInputs = [
+    faketty
+    nodejs
+    pnpm.configHook
+    makeBinaryWrapper
+  ];
+
+  # workaround for https://github.com/nrwl/nx/issues/22445
+  buildPhase = ''
+    runHook preBuild
+
+    faketty pnpm run bundle-for-release --disableRemoteCache=true --nxBail=true --outputStyle=static
+
+    runHook postBuild
+  '';
+
+  installPhase = ''
+    runHook preInstall
+
+    mkdir -p $out/lib/node_modules/@shopify/cli/{dist,bin}
+    mkdir -p $out/bin
+    pushd packages/cli
+    rm -rf dist/*.map
+    mv dist/* $out/lib/node_modules/@shopify/cli/dist
+    mv bin/run.js $out/lib/node_modules/@shopify/cli/bin/run.js
+    mv package.json oclif.manifest.json $out/lib/node_modules/@shopify/cli
+    popd
+    # Install runtime dependencies
+    rm -rf node_modules
+    pnpm config set nodeLinker hoisted
+    pnpm install --offline --prod --force --ignore-scripts --frozen-lockfile
+    mv node_modules $out/lib/node_modules/@shopify/cli/node_modules
+
+    makeWrapper ${lib.getExe nodejs} $out/bin/shopify \
+      --add-flags "$out/lib/node_modules/@shopify/cli/bin/run.js"
+
+    runHook postInstall
+  '';
+
+  nativeInstallCheckInputs = [ versionCheckHook ];
+  doInstallCheck = true;
+
+  passthru.updateScript = nix-update-script { };
+
   meta = {
-    platforms = lib.platforms.all;
+    platforms = lib.platforms.unix;
     mainProgram = "shopify";
     description = "CLI which helps you build against the Shopify platform faster";
     homepage = "https://github.com/Shopify/cli";
-    changelog = "https://github.com/Shopify/cli/releases/tag/${version}";
+    changelog = "https://github.com/Shopify/cli/releases/tag/${finalAttrs.version}";
     license = lib.licenses.mit;
     maintainers = with lib.maintainers; [
       fd
       onny
     ];
   };
-}
+})
diff --git a/pkgs/by-name/sh/shopify-cli/update.sh b/pkgs/by-name/sh/shopify-cli/update.sh
deleted file mode 100755
index a63a81b59057..000000000000
--- a/pkgs/by-name/sh/shopify-cli/update.sh
+++ /dev/null
@@ -1,37 +0,0 @@
-#!/usr/bin/env nix-shell
-#!nix-shell -i bash -p curl nix-update prefetch-npm-deps nodejs jq gnused ruby bundix
-
-set -eu -o pipefail
-
-# Make a temporary directory and make sure it's removed when the script exits
-tmp=$(mktemp -d)
-trap "rm -rf $tmp" EXIT
-
-package_dir="$(dirname "${BASH_SOURCE[0]}")"
-pushd "$package_dir"
-
-curl -sfL ${GITHUB_TOKEN:+-u ":$GITHUB_TOKEN"} https://api.github.com/repos/Shopify/cli/releases/latest > $tmp/latest.json
-version=$(cat $tmp/latest.json | jq -r '.tag_name')
-
-if [[ "$UPDATE_NIX_OLD_VERSION" == "$version" ]]; then
-    echo "Already up to date!"
-    exit 0
-fi
-
-pushd manifests
-
-# Update the package.json
-sed -i "s|$UPDATE_NIX_OLD_VERSION|$version|g" package.json
-
-# Update the package-lock.json
-rm -f package-lock.json
-npm i --package-lock-only
-npm_hash=$(prefetch-npm-deps package-lock.json)
-
-popd
-
-sed -i "s|npmDepsHash = \".*\";|npmDepsHash = \"$npm_hash\";|" package.nix
-
-popd
-
-nix-update shopify-cli --version $version