From a52facf1ebef0955118d1c71311546b60206ed6a Mon Sep 17 00:00:00 2001
From: Justin Bedo <cu@cua0.org>
Date: Wed, 27 May 2026 14:30:49 +1000
Subject: [PATCH] rPackages.rhdf5: update patch

---
 .../development/r-modules/patches/rhdf5.patch | 36 -------------------
 1 file changed, 36 deletions(-)

diff --git a/pkgs/development/r-modules/patches/rhdf5.patch b/pkgs/development/r-modules/patches/rhdf5.patch
index 129a8a225f0d..c98172a98780 100644
--- a/pkgs/development/r-modules/patches/rhdf5.patch
+++ b/pkgs/development/r-modules/patches/rhdf5.patch
@@ -9,39 +9,3 @@ index 713b44c..704ac17 100644
  
  #PKG_CFLAGS = -Wall
  
-diff --git a/src/h5testLock.c b/src/h5testLock.c
-index b326444..5d58b4a 100644
---- a/src/h5testLock.c
-+++ b/src/h5testLock.c
-@@ -8,16 +8,16 @@ SEXP _h5fileLock(SEXP _file_name) {
-   int lk = -1;
- 
-   /* create the temporary file */
--  fd = HDopen(file_name, O_RDWR | O_CREAT | O_TRUNC, 0666);
-+  fd = open(file_name, O_RDWR | O_CREAT | O_TRUNC, 0666);
- 
-   /* try to lock file */
--  lk = HDflock(fd, LOCK_EX | LOCK_NB);
-+  lk = flock(fd, LOCK_EX | LOCK_NB);
-   
-   /* unlock so we can remove */
--  HDflock(fd, LOCK_UN);
-+  flock(fd, LOCK_UN);
-   
-   /* close */
--  HDclose(fd);
-+  close(fd);
-   
-   /* return value of lock attempt */
-   PROTECT(Rval = allocVector(INTSXP, 1));
-diff --git a/src/h5testLock.h b/src/h5testLock.h
-index 2c1c5e4..25914ff 100644
---- a/src/h5testLock.h
-+++ b/src/h5testLock.h
-@@ -1,5 +1,5 @@
- #include <fcntl.h>
-+#include <unistd.h>
- #include "myhdf5.h"
--#include <H5private.h>
- 
- SEXP _h5fileLock();