From 081227701e0d75e58d599de4383102565dd149c3 Mon Sep 17 00:00:00 2001 From: "R. Ryantm" Date: Wed, 3 Jun 2026 06:34:49 +0000 Subject: [PATCH] conduit: 0.9.5 -> 0.9.7 --- pkgs/by-name/co/conduit/package.nix | 25 ++++++++---- .../python-modules/conduit/default.nix | 39 ++++++++++++------- 2 files changed, 44 insertions(+), 20 deletions(-) diff --git a/pkgs/by-name/co/conduit/package.nix b/pkgs/by-name/co/conduit/package.nix index b86b3f91bfac..21d7033120f5 100644 --- a/pkgs/by-name/co/conduit/package.nix +++ b/pkgs/by-name/co/conduit/package.nix @@ -15,14 +15,14 @@ stdenv.mkDerivation (finalAttrs: { pname = "conduit"; - version = "0.9.5"; + version = "0.9.7"; src = fetchFromGitHub { owner = "LLNL"; repo = "conduit"; tag = "v${finalAttrs.version}"; fetchSubmodules = true; - hash = "sha256-mX7/5C4wd70Kx1rQyo2BcZMwDRqvxo4fBdz3pq7PuvM="; + hash = "sha256-DmnHGj6Q/i+wVNIbaTGrFX9f0Kry2X5bC7zahXv29I4="; }; nativeBuildInputs = [ @@ -41,13 +41,24 @@ stdenv.mkDerivation (finalAttrs: { (lib.cmakeBool "ENABLE_MPI" mpiSupport) ]; - installCheckPhase = '' - runHook preInstallCheck + installCheckPhase = + let + excludedTests = lib.optionals stdenv.hostPlatform.isDarwin [ + # SIGTRAP***Exception + "t_conduit_fixed_size_vector" + ]; - make test + excludedTestsString = lib.optionalString ( + excludedTests != [ ] + ) "-E '^(${builtins.concatStringsSep "|" excludedTests})$'"; + in + '' + runHook preInstallCheck - runHook postInstallCheck - ''; + ctest --output-on-failure ${excludedTestsString} + + runHook postInstallCheck + ''; doInstallCheck = true; passthru = { diff --git a/pkgs/development/python-modules/conduit/default.nix b/pkgs/development/python-modules/conduit/default.nix index 9fd15ff2eea0..837eec0364d1 100644 --- a/pkgs/development/python-modules/conduit/default.nix +++ b/pkgs/development/python-modules/conduit/default.nix @@ -3,9 +3,18 @@ stdenv, pkgs, buildPythonPackage, - setuptools, - numpy, + + # build-system + cmake, + ninja, pip, + setuptools, + + # nativeBuildInputs + openmpi, + + # dependencies + numpy, mpiSupport ? false, }: @@ -17,32 +26,36 @@ buildPythonPackage { pname version src - nativeBuildInputs + # nativeBuildInputs buildInputs ; pyproject = true; + __structuredAttrs = true; - # Needed for cmake to find openmpi - strictDeps = false; - - postPatch = '' - substituteInPlace setup.py \ + postPatch = (conduit.postPatch or "") + '' + substituteInPlace pyproject.toml \ --replace-fail \ - "'-j2'" \ - "f'-j{os.environ.get(\"NIX_BUILD_CORES\")}'" + "cmake<=3.30.0" \ + "cmake" ''; - dontUseCmakeConfigure = true; - env.ENABLE_MPI = mpiSupport; build-system = [ + cmake + ninja + pip setuptools ]; + dontUseCmakeConfigure = true; + + nativeBuildInputs = conduit.nativeBuildInputs ++ [ + # openmpi needs to be in nativeBuildInputs, otherwise cmake can't find it + openmpi + ]; dependencies = [ numpy - pip ]; pythonImportsCheck = [ "conduit" ];