diff --git a/pkgs/by-name/bc/bcftools/package.nix b/pkgs/by-name/bc/bcftools/package.nix index 95ad717271fa..29d200a18e2f 100644 --- a/pkgs/by-name/bc/bcftools/package.nix +++ b/pkgs/by-name/bc/bcftools/package.nix @@ -1,7 +1,8 @@ { lib, stdenv, - fetchurl, + fetchFromGitHub, + autoreconfHook, htslib, zlib, bzip2, @@ -12,16 +13,19 @@ bash, }: -stdenv.mkDerivation rec { +stdenv.mkDerivation (finalAttrs: { pname = "bcftools"; version = "1.22"; - src = fetchurl { - url = "https://github.com/samtools/bcftools/releases/download/${version}/${pname}-${version}.tar.bz2"; - sha256 = "sha256-8queL2BbEgOn6cv7Cj63aJMiKX+MNLRdxSN/5X2YSJ8="; + src = fetchFromGitHub { + owner = "samtools"; + repo = "bcftools"; + tag = finalAttrs.version; + hash = "sha256-S+FuqjiOf38sAQKWYOixv/MlXGnuDmkx9z4Co/pk/eM="; }; nativeBuildInputs = [ + autoreconfHook perl python3 ]; @@ -34,6 +38,10 @@ stdenv.mkDerivation rec { curl ]; + nativeCheckInputs = [ + htslib + ]; + strictDeps = true; makeFlags = [ @@ -59,4 +67,4 @@ stdenv.mkDerivation rec { platforms = platforms.unix; maintainers = [ maintainers.mimame ]; }; -} +})