From 67effe018b80e4eb028072def00d518b1ea3b66a Mon Sep 17 00:00:00 2001
From: lucasew <lucas59356@gmail.com>
Date: Sat, 8 Jul 2023 14:49:58 -0300
Subject: [PATCH] python3Packages.opentsne: init at 1.0.0

Signed-off-by: lucasew <lucas59356@gmail.com>
---
 .../python-modules/opentsne/default.nix       | 56 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  2 +
 2 files changed, 58 insertions(+)
 create mode 100644 pkgs/development/python-modules/opentsne/default.nix

diff --git a/pkgs/development/python-modules/opentsne/default.nix b/pkgs/development/python-modules/opentsne/default.nix
new file mode 100644
index 000000000000..beab3b0d5e6d
--- /dev/null
+++ b/pkgs/development/python-modules/opentsne/default.nix
@@ -0,0 +1,56 @@
+{ lib
+, buildPythonPackage
+, fetchFromGitHub
+, cython
+, numpy
+, scipy
+, scikit-learn
+, pytestCheckHook
+, nix-update-script
+, setuptools
+}:
+
+let
+  self = buildPythonPackage rec {
+    pname = "opentsne";
+    version = "1.0.0";
+    format = "pyproject";
+
+    src = fetchFromGitHub {
+      owner = "pavlin-policar";
+      repo = "openTSNE";
+      rev = "v${version}";
+      hash = "sha256-L5Qx6dMJlXF3EaWwlFTQ3dkhGXc5PvQBXYJo+QO+Hxc=";
+    };
+
+    propagatedBuildInputs = [ numpy scipy scikit-learn ];
+    nativeBuildInputs = [ cython setuptools ];
+
+    pythonImportsCheck = [ "openTSNE" ];
+    doCheck = false;
+
+    passthru = {
+      updateScript = nix-update-script {};
+      tests.pytest = self.overridePythonAttrs (old: {
+        pname = "${old.pname}-tests";
+        format = "other";
+
+        postPatch = "rm openTSNE -rf";
+
+        doBuild = false;
+        doInstall = false;
+
+        doCheck = true;
+        nativeCheckInputs = [ pytestCheckHook self ];
+      });
+    };
+
+    meta = {
+      description = "Modular Python implementation of t-Distributed Stochasitc Neighbor Embedding";
+      homepage = "https://github.com/pavlin-policar/openTSNE";
+      changelog = "https://github.com/pavlin-policar/openTSNE/releases/tag/${version}";
+      license = [ lib.licenses.bsd3 ];
+      maintainers = [ lib.maintainers.lucasew ];
+    };
+  };
+in self
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 8dd5c0dfecba..179c42864420 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -7544,6 +7544,8 @@ self: super: with self; {
 
   opentracing = callPackage ../development/python-modules/opentracing { };
 
+  opentsne = callPackage ../development/python-modules/opentsne { };
+
   openvino = callPackage ../development/python-modules/openvino {
     openvino-native = pkgs.openvino.override {
       inherit python;