From 4eb8d73b04aeec56d49dee290da60a57793bd161 Mon Sep 17 00:00:00 2001
From: Gaetan Lepage <gaetan@glepage.com>
Date: Mon, 29 Jun 2026 15:02:33 +0000
Subject: [PATCH] python3Packages.scverse-misc: init at 0.1.0

---
 .../python-modules/scverse-misc/default.nix   | 87 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  2 +
 2 files changed, 89 insertions(+)
 create mode 100644 pkgs/development/python-modules/scverse-misc/default.nix

diff --git a/pkgs/development/python-modules/scverse-misc/default.nix b/pkgs/development/python-modules/scverse-misc/default.nix
new file mode 100644
index 000000000000..1ebdb5c30a37
--- /dev/null
+++ b/pkgs/development/python-modules/scverse-misc/default.nix
@@ -0,0 +1,87 @@
+{
+  lib,
+  buildPythonPackage,
+  fetchFromGitHub,
+
+  # build-system
+  hatch-vcs,
+  hatchling,
+
+  # dependencies
+  session-info2,
+  typing-extensions,
+
+  # optional-dependencies
+  # datasets:
+  anndata,
+  pooch,
+  pyyaml,
+  tqdm,
+  # settings:
+  pydantic-settings,
+  python-dotenv,
+  # sphinx:
+  sphinx,
+
+  # tests
+  pytestCheckHook,
+}:
+
+buildPythonPackage (finalAttrs: {
+  pname = "scverse-misc";
+  version = "0.1.1";
+  pyproject = true;
+  __structuredAttrs = true;
+
+  src = fetchFromGitHub {
+    owner = "scverse";
+    repo = "scverse-misc";
+    tag = "v${finalAttrs.version}";
+    hash = "sha256-PkvOaxGbZ1i10xgghdvGLCKiXcwg/eZzYvQ7Gp3K+JE=";
+  };
+
+  build-system = [
+    hatch-vcs
+    hatchling
+  ];
+
+  dependencies = [
+    session-info2
+    typing-extensions
+  ];
+
+  optional-dependencies = {
+    datasets = [
+      anndata
+      pooch
+      pyyaml
+      tqdm
+    ];
+    settings = [
+      pydantic-settings
+      python-dotenv
+    ];
+    spatialdata = [
+      # spatialdata (unpackaged)
+    ];
+    sphinx = [
+      # pydocstring-rs (unpackaged)
+      sphinx
+    ];
+  };
+
+  pythonImportsCheck = [ "scverse_misc" ];
+
+  nativeCheckInputs = [
+    pytestCheckHook
+    pyyaml
+  ];
+
+  meta = {
+    description = "Miscellaneous utility code used by scverse packages";
+    homepage = "https://github.com/scverse/scverse-misc";
+    changelog = "https://github.com/scverse/scverse-misc/blob/${finalAttrs.src.tag}/CHANGELOG.md";
+    license = lib.licenses.bsd3;
+    maintainers = with lib.maintainers; [ GaetanLepage ];
+  };
+})
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 30560967024b..ad79d6a063ed 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -17922,6 +17922,8 @@ self: super: with self; {
 
   scspell = callPackage ../development/python-modules/scspell { };
 
+  scverse-misc = callPackage ../development/python-modules/scverse-misc { };
+
   sdbus = callPackage ../development/python-modules/sdbus { };
 
   sdbus-networkmanager = callPackage ../development/python-modules/sdbus-networkmanager { };