From 486ee88d17cb4243cf348b0c373abf6d2e6be159 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?L=C3=A1szl=C3=B3=20Kupcsik?= <koopac@gmail.com>
Date: Tue, 28 May 2024 23:11:48 +0200
Subject: [PATCH] rPackages.Rbwa: fix build

---
 pkgs/development/r-modules/default.nix | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix
index 80df4bbe8dd4..38e242b8489f 100644
--- a/pkgs/development/r-modules/default.nix
+++ b/pkgs/development/r-modules/default.nix
@@ -1644,6 +1644,15 @@ let
       hardeningDisable = [ "format" ];
     });
 
+    Rbwa = old.Rbwa.overrideAttrs (attrs: {
+      # Parallel build cleans up *.o before they can be packed in a library
+      postPatch = ''
+        substituteInPlace src/Makefile --replace-fail \
+          "all:\$(PROG) ../inst/bwa clean" \
+          "all:\$(PROG) ../inst/bwa" \
+      '';
+    });
+
     ROracle = old.ROracle.overrideAttrs (attrs: {
       configureFlags = [
         "--with-oci-lib=${pkgs.oracle-instantclient.lib}/lib"