From 55ae35dc27b3ece4a910c41ce676d393fe136c51 Mon Sep 17 00:00:00 2001 From: "R. Ryantm" Date: Sun, 11 Jun 2023 12:06:25 +0000 Subject: [PATCH 1/3] python310Packages.dnachisel: 3.2.10 -> 3.2.11 --- pkgs/development/python-modules/dnachisel/default.nix | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pkgs/development/python-modules/dnachisel/default.nix b/pkgs/development/python-modules/dnachisel/default.nix index 52ca9eff669b..4a6369855448 100644 --- a/pkgs/development/python-modules/dnachisel/default.nix +++ b/pkgs/development/python-modules/dnachisel/default.nix @@ -15,13 +15,13 @@ buildPythonPackage rec { pname = "dnachisel"; - version = "3.2.10"; + version = "3.2.11"; src = fetchFromGitHub { owner = "Edinburgh-Genome-Foundry"; repo = "DnaChisel"; rev = "refs/tags/v${version}"; - hash = "sha256-YlNOvK7ZXUHYdRX1NFEdZ646NGLtGXU1YgAjN6RY2QE="; + hash = "sha256-rcZq/HhU1xIyQ1jM8+gO9ONDLBAxiUIByoWk2nMwuGA="; }; propagatedBuildInputs = [ From f09bde4cd04ea035b199537b28ccc72985693cde Mon Sep 17 00:00:00 2001 From: Fabian Affolter Date: Sun, 11 Jun 2023 15:05:08 +0200 Subject: [PATCH 2/3] python310Packages.dnachisel: add changelog to meta --- pkgs/development/python-modules/dnachisel/default.nix | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/pkgs/development/python-modules/dnachisel/default.nix b/pkgs/development/python-modules/dnachisel/default.nix index 4a6369855448..697051337b84 100644 --- a/pkgs/development/python-modules/dnachisel/default.nix +++ b/pkgs/development/python-modules/dnachisel/default.nix @@ -50,12 +50,16 @@ buildPythonPackage rec { "test_avoid_phage_blast_matches" "test_avoid_matches_with_list" "test_avoid_matches_with_phage" - ]; - pythonImportsCheck = [ "dnachisel" ]; + ]; + + pythonImportsCheck = [ + "dnachisel" + ]; meta = with lib; { homepage = "https://github.com/Edinburgh-Genome-Foundry/DnaChisel"; description = "Optimize DNA sequences under constraints"; + changelog = "https://github.com/Edinburgh-Genome-Foundry/DnaChisel/releases/tag/v${version}"; license = licenses.mit; maintainers = with maintainers; [ prusnak ]; }; From e85f0c7cf6f7319a91674f11fccbbc9a8d5ca30f Mon Sep 17 00:00:00 2001 From: Fabian Affolter Date: Sun, 11 Jun 2023 15:06:46 +0200 Subject: [PATCH 3/3] python310Packages.dnachisel: add format - disable on unsupported Python releases --- pkgs/development/python-modules/dnachisel/default.nix | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/pkgs/development/python-modules/dnachisel/default.nix b/pkgs/development/python-modules/dnachisel/default.nix index 697051337b84..5a70ae1c16df 100644 --- a/pkgs/development/python-modules/dnachisel/default.nix +++ b/pkgs/development/python-modules/dnachisel/default.nix @@ -7,6 +7,7 @@ , numpy , proglog , pytestCheckHook +, pythonOlder , python-codon-tables , primer3 , genome-collector @@ -16,6 +17,9 @@ buildPythonPackage rec { pname = "dnachisel"; version = "3.2.11"; + format = "setuptools"; + + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "Edinburgh-Genome-Foundry";