diff --git a/pkgs/applications/misc/gpxsee/default.nix b/pkgs/by-name/gp/gpxsee/package.nix
similarity index 72%
rename from pkgs/applications/misc/gpxsee/default.nix
rename to pkgs/by-name/gp/gpxsee/package.nix
index 1c0fef12c42a..3e414f88eadb 100644
--- a/pkgs/applications/misc/gpxsee/default.nix
+++ b/pkgs/by-name/gp/gpxsee/package.nix
@@ -2,52 +2,33 @@
   lib,
   stdenv,
   fetchFromGitHub,
-  qmake,
   nix-update-script,
-  qtbase,
-  qttools,
-  qtlocation ? null, # qt5 only
-  qtpositioning ? null, # qt6 only
-  qtserialport,
-  qtsvg,
-  wrapQtAppsHook,
+  qt6,
   wrapGAppsHook3,
 }:
 
-let
-  isQt6 = lib.versions.major qtbase.version == "6";
-in
 stdenv.mkDerivation (finalAttrs: {
   pname = "gpxsee";
-  version = "13.46";
+  version = "13.47";
 
   src = fetchFromGitHub {
     owner = "tumic0";
     repo = "GPXSee";
     tag = finalAttrs.version;
-    hash = "sha256-SkAEnKviUHQrej1fhpLs1bh/nAOgmRzzBzTFe4fURVc=";
+    hash = "sha256-1waE0A70MsUaGttaxHcOO2aaeRdZ9ihc7ZeqJ+azH/0=";
   };
 
   buildInputs = [
-    qtserialport
-  ]
-  ++ (
-    if isQt6 then
-      [
-        qtbase
-        qtpositioning
-        qtsvg
-      ]
-    else
-      [
-        qtlocation
-      ]
-  );
+    qt6.qtbase
+    qt6.qtpositioning
+    qt6.qtserialport
+    qt6.qtsvg
+  ];
 
   nativeBuildInputs = [
-    qmake
-    qttools
-    wrapQtAppsHook
+    qt6.qmake
+    qt6.qttools
+    qt6.wrapQtAppsHook
     wrapGAppsHook3
   ];
 
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index 51bceb1e742e..ffcc8a553d97 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -1118,6 +1118,8 @@ mapAliases {
   googler = throw "'googler' has been removed, as it no longer works and is abandoned upstream"; # Added 2025-04-01
   gpicview = throw "'gpicview' has been removed due to lack of maintenance upstream and depending on gtk2. Consider using 'loupe', 'gthumb' or 'image-roll' instead"; # Added 2024-09-15
   gprbuild-boot = gnatPackages.gprbuild-boot; # Added 2024-02-25;
+  gpxsee-qt5 = throw "gpxsee-qt5 was removed, use gpxsee instead"; # added 2025-09-09
+  gpxsee-qt6 = gpxsee; # added 2025-09-09
 
   gqview = throw "'gqview' has been removed due to lack of maintenance upstream and depending on gtk2. Consider using 'gthumb' instead";
   gr-framework = throw "gr-framework has been removed, as it was broken"; # Added 2025-08-25
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 71f5affd6a80..1efc68614a62 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -11755,12 +11755,6 @@ with pkgs;
     withDoc = true;
   };
 
-  gpxsee-qt5 = libsForQt5.callPackage ../applications/misc/gpxsee { };
-
-  gpxsee-qt6 = qt6Packages.callPackage ../applications/misc/gpxsee { };
-
-  gpxsee = gpxsee-qt5;
-
   guvcview = libsForQt5.callPackage ../os-specific/linux/guvcview { };
 
   hachoir = with python3Packages; toPythonApplication hachoir;