diff --git a/pkgs/development/python-modules/equinox/default.nix b/pkgs/development/python-modules/equinox/default.nix
index b56147a10b5b..01cf6219a370 100644
--- a/pkgs/development/python-modules/equinox/default.nix
+++ b/pkgs/development/python-modules/equinox/default.nix
@@ -3,7 +3,6 @@
   stdenv,
   buildPythonPackage,
   fetchFromGitHub,
-  fetchpatch2,
 
   # build-system
   hatchling,
@@ -23,35 +22,16 @@
 
 buildPythonPackage rec {
   pname = "equinox";
-  version = "0.13.0";
+  version = "0.13.1";
   pyproject = true;
 
   src = fetchFromGitHub {
     owner = "patrick-kidger";
     repo = "equinox";
     tag = "v${version}";
-    hash = "sha256-zXgAuFGWKHShKodi9swnWIry4VU9s4pBhBRoK5KzaL0=";
+    hash = "sha256-txgL5a+kKT28gAS8HianBgnnR+J25R2wrpRr8HEWCXA=";
   };
 
-  patches = [
-    # The following two patches have been merged upstream and should be removed when updating to the next release
-    # They fix the incompatibilities with jax>=0.7.0
-
-    # https://github.com/patrick-kidger/equinox/pull/1086
-    (fetchpatch2 {
-      name = "remove-deprecated-batching-NotMapped";
-      url = "https://github.com/patrick-kidger/equinox/commit/6a6a441ced2fe64191a087752f1c2e71a6ce39f1.patch";
-      hash = "sha256-tzHFjMI3gAIh5MPkdbmzsky/oFjDEbOIkPGQMQ+gcQQ=";
-    })
-
-    # https://github.com/patrick-kidger/equinox/pull/1082
-    (fetchpatch2 {
-      name = "allow-creating-weak-references-to-flatten";
-      url = "https://github.com/patrick-kidger/equinox/commit/62b3c94ad56bdb63524702b320e977d2d93dbe72.patch";
-      hash = "sha256-c1FKCnC3/okuP2VJV4h7sPRYQeYJZSdzEG5ETL2M35k=";
-    })
-  ];
-
   # Relax speed constraints on tests that can fail on busy builders
   postPatch = ''
     substituteInPlace tests/test_while_loop.py \