diff --git a/pkgs/development/libraries/sqlite/default.nix b/pkgs/development/libraries/sqlite/default.nix
index f7a870e27620..f2de9320ce85 100644
--- a/pkgs/development/libraries/sqlite/default.nix
+++ b/pkgs/development/libraries/sqlite/default.nix
@@ -16,13 +16,13 @@ in
 
 stdenv.mkDerivation rec {
   pname = "sqlite${lib.optionalString interactive "-interactive"}";
-  version = "3.45.3";
+  version = "3.46.0";
 
   # nixpkgs-update: no auto update
   # NB! Make sure to update ./tools.nix src (in the same directory).
   src = fetchurl {
     url = "https://sqlite.org/2024/sqlite-autoconf-${archiveVersion version}.tar.gz";
-    hash = "sha256-soCcpTEkwZxg9Cv2J3NurgEa/cwgW7SCcKXumjgZFTE=";
+    hash = "sha256-b45qezNSc3SIFvmztiu9w3Koid6HgtfwSMZTpEdBen0=";
   };
 
   outputs = [ "bin" "dev" "out" ];
diff --git a/pkgs/development/libraries/sqlite/tools.nix b/pkgs/development/libraries/sqlite/tools.nix
index 0f6fe766a3de..2b843c0b22e0 100644
--- a/pkgs/development/libraries/sqlite/tools.nix
+++ b/pkgs/development/libraries/sqlite/tools.nix
@@ -4,12 +4,12 @@ let
   archiveVersion = import ./archive-version.nix lib;
   mkTool = { pname, makeTarget, description, homepage, mainProgram }: stdenv.mkDerivation rec {
     inherit pname;
-    version = "3.45.3";
+    version = "3.46.0";
 
     # nixpkgs-update: no auto update
     src = assert version == sqlite.version; fetchurl {
       url = "https://sqlite.org/2024/sqlite-src-${archiveVersion version}.zip";
-      hash = "sha256-7AyVnkLLXxgEE10FVfjqMr5v8gSOsYG8zTZ8j1PxhdE=";
+      hash = "sha256-BwNiEJvraJn2V5dXG5i4gkyPQ39bKSb4juBo2Y7zaOw=";
     };
 
     nativeBuildInputs = [ unzip ];