diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 402ad1702067..e41261386cd5 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -9935,7 +9935,7 @@ self: super: with self; {
 
   pybigwig = callPackage ../development/python-modules/pybigwig { };
 
-  pybind11 = callPackage ../development/python-modules/pybind11 { };
+  pybind11 = pkgs.disable-warnings-if-gcc13 (callPackage ../development/python-modules/pybind11 { });
 
   pybindgen = callPackage ../development/python-modules/pybindgen { };