diff --git a/pkgs/development/python-modules/jaxopt/default.nix b/pkgs/development/python-modules/jaxopt/default.nix
index 211afb5ee57a..dcabae9d459a 100644
--- a/pkgs/development/python-modules/jaxopt/default.nix
+++ b/pkgs/development/python-modules/jaxopt/default.nix
@@ -79,6 +79,9 @@ buildPythonPackage rec {
       # AssertionError: Not equal to tolerance rtol=1e-06, atol=1e-06
       # https://github.com/google/jaxopt/issues/618
       "test_binary_logit_log_likelihood"
+
+      # AssertionError (flaky numerical tests)
+      "test_logreg_with_intercept_manual_loop3"
     ]
     ++ lib.optionals (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64) [
       # https://github.com/google/jaxopt/issues/577